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Genes within 1Mb (chr12:96170774:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 953028 sc-eQTL 2.94e-01 -0.0779 0.0741 0.335 B L1
ENSG00000059758 CDK17 -229706 sc-eQTL 7.21e-01 0.0165 0.0462 0.335 B L1
ENSG00000111142 METAP2 697254 sc-eQTL 2.64e-01 -0.0731 0.0652 0.335 B L1
ENSG00000111144 LTA4H 127254 sc-eQTL 7.66e-01 0.0171 0.0574 0.335 B L1
ENSG00000111145 ELK3 -23601 sc-eQTL 7.12e-01 0.0226 0.0611 0.335 B L1
ENSG00000136014 USP44 619298 sc-eQTL 6.47e-01 0.0346 0.0753 0.335 B L1
ENSG00000139343 SNRPF 311846 sc-eQTL 4.74e-01 -0.0398 0.0555 0.335 B L1
ENSG00000139350 NEDD1 -736449 sc-eQTL 1.70e-01 -0.111 0.0807 0.335 B L1
ENSG00000180263 FGD6 953292 sc-eQTL 5.80e-01 -0.0419 0.0755 0.335 B L1
ENSG00000028203 VEZT 953028 sc-eQTL 7.48e-01 -0.0199 0.0619 0.335 CD4T L1
ENSG00000059758 CDK17 -229706 sc-eQTL 6.79e-01 0.016 0.0385 0.335 CD4T L1
ENSG00000111142 METAP2 697254 sc-eQTL 7.09e-01 -0.0201 0.0537 0.335 CD4T L1
ENSG00000111144 LTA4H 127254 sc-eQTL 3.14e-02 0.113 0.0523 0.335 CD4T L1
ENSG00000111145 ELK3 -23601 sc-eQTL 9.38e-01 0.00445 0.0573 0.335 CD4T L1
ENSG00000136014 USP44 619298 sc-eQTL 4.31e-02 0.165 0.081 0.335 CD4T L1
ENSG00000139343 SNRPF 311846 sc-eQTL 9.87e-01 0.000807 0.0501 0.335 CD4T L1
ENSG00000139350 NEDD1 -736449 sc-eQTL 5.17e-01 -0.04 0.0616 0.335 CD4T L1
ENSG00000028203 VEZT 953028 sc-eQTL 9.53e-01 0.00443 0.0745 0.335 CD8T L1
ENSG00000059758 CDK17 -229706 sc-eQTL 7.02e-01 -0.0151 0.0395 0.335 CD8T L1
ENSG00000111142 METAP2 697254 sc-eQTL 8.41e-01 0.0128 0.0637 0.335 CD8T L1
ENSG00000111144 LTA4H 127254 sc-eQTL 9.96e-02 0.0696 0.0421 0.335 CD8T L1
ENSG00000111145 ELK3 -23601 sc-eQTL 8.59e-02 -0.109 0.0634 0.335 CD8T L1
ENSG00000136014 USP44 619298 sc-eQTL 5.84e-01 0.0398 0.0725 0.335 CD8T L1
ENSG00000139343 SNRPF 311846 sc-eQTL 1.05e-01 -0.0845 0.0519 0.335 CD8T L1
ENSG00000139350 NEDD1 -736449 sc-eQTL 4.86e-01 0.0484 0.0694 0.335 CD8T L1
ENSG00000028203 VEZT 953028 sc-eQTL 6.70e-01 0.0375 0.0878 0.342 DC L1
ENSG00000059758 CDK17 -229706 sc-eQTL 2.49e-02 -0.164 0.0725 0.342 DC L1
ENSG00000084110 HAL 174409 sc-eQTL 2.29e-01 0.101 0.0833 0.342 DC L1
ENSG00000111142 METAP2 697254 sc-eQTL 1.00e-01 -0.151 0.0915 0.342 DC L1
ENSG00000111144 LTA4H 127254 sc-eQTL 6.43e-01 0.0317 0.0683 0.342 DC L1
ENSG00000111145 ELK3 -23601 sc-eQTL 8.54e-01 -0.0155 0.0837 0.342 DC L1
ENSG00000139343 SNRPF 311846 sc-eQTL 6.90e-01 0.0278 0.0696 0.342 DC L1
ENSG00000139350 NEDD1 -736449 sc-eQTL 8.99e-01 -0.0114 0.0894 0.342 DC L1
ENSG00000180263 FGD6 953292 sc-eQTL 4.01e-01 0.0694 0.0824 0.342 DC L1
ENSG00000257715 AC007298.1 145451 sc-eQTL 6.27e-01 0.0393 0.0807 0.342 DC L1
ENSG00000028203 VEZT 953028 sc-eQTL 3.48e-02 -0.171 0.0803 0.335 Mono L1
ENSG00000059758 CDK17 -229706 sc-eQTL 7.87e-01 0.0161 0.0594 0.335 Mono L1
ENSG00000084110 HAL 174409 sc-eQTL 2.09e-01 -0.0939 0.0745 0.335 Mono L1
ENSG00000111142 METAP2 697254 sc-eQTL 2.04e-01 -0.0821 0.0644 0.335 Mono L1
ENSG00000111144 LTA4H 127254 sc-eQTL 3.80e-01 0.0742 0.0843 0.335 Mono L1
ENSG00000111145 ELK3 -23601 sc-eQTL 1.55e-01 0.0805 0.0565 0.335 Mono L1
ENSG00000139343 SNRPF 311846 sc-eQTL 2.67e-01 0.0594 0.0533 0.335 Mono L1
ENSG00000139350 NEDD1 -736449 sc-eQTL 4.11e-01 -0.0675 0.082 0.335 Mono L1
ENSG00000180263 FGD6 953292 sc-eQTL 9.23e-01 -0.00667 0.0688 0.335 Mono L1
ENSG00000257715 AC007298.1 145451 sc-eQTL 6.95e-01 0.0312 0.0796 0.335 Mono L1
ENSG00000028203 VEZT 953028 sc-eQTL 4.92e-01 0.0562 0.0816 0.335 NK L1
ENSG00000059758 CDK17 -229706 sc-eQTL 2.85e-02 -0.0952 0.0432 0.335 NK L1
ENSG00000111142 METAP2 697254 sc-eQTL 4.90e-01 -0.0447 0.0646 0.335 NK L1
ENSG00000111144 LTA4H 127254 sc-eQTL 2.06e-01 0.0937 0.0738 0.335 NK L1
ENSG00000111145 ELK3 -23601 sc-eQTL 2.43e-01 -0.0821 0.0701 0.335 NK L1
ENSG00000139343 SNRPF 311846 sc-eQTL 9.89e-02 -0.096 0.0579 0.335 NK L1
ENSG00000139350 NEDD1 -736449 sc-eQTL 4.88e-01 -0.0512 0.0737 0.335 NK L1
ENSG00000028203 VEZT 953028 sc-eQTL 2.91e-01 -0.0964 0.0911 0.335 Other_T L1
ENSG00000059758 CDK17 -229706 sc-eQTL 9.38e-01 -0.00291 0.0372 0.335 Other_T L1
ENSG00000074527 NTN4 379622 sc-eQTL 9.74e-01 0.00229 0.0688 0.335 Other_T L1
ENSG00000111142 METAP2 697254 sc-eQTL 1.79e-01 0.0953 0.0707 0.335 Other_T L1
ENSG00000111144 LTA4H 127254 sc-eQTL 5.14e-01 0.0508 0.0777 0.335 Other_T L1
ENSG00000111145 ELK3 -23601 sc-eQTL 6.00e-01 0.0318 0.0606 0.335 Other_T L1
ENSG00000139343 SNRPF 311846 sc-eQTL 2.37e-01 0.0666 0.0562 0.335 Other_T L1
ENSG00000139350 NEDD1 -736449 sc-eQTL 7.24e-01 0.0304 0.0858 0.335 Other_T L1
ENSG00000188596 CFAP54 -318797 sc-eQTL 5.77e-01 -0.0496 0.0889 0.335 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 953028 sc-eQTL 8.10e-01 -0.0244 0.102 0.347 B_Activated L2
ENSG00000059758 CDK17 -229706 sc-eQTL 8.29e-01 -0.0182 0.0842 0.347 B_Activated L2
ENSG00000111142 METAP2 697254 sc-eQTL 4.51e-01 -0.0799 0.106 0.347 B_Activated L2
ENSG00000111144 LTA4H 127254 sc-eQTL 1.68e-01 0.131 0.0949 0.347 B_Activated L2
ENSG00000111145 ELK3 -23601 sc-eQTL 4.75e-01 -0.0723 0.101 0.347 B_Activated L2
ENSG00000136014 USP44 619298 sc-eQTL 5.08e-01 0.0514 0.0775 0.347 B_Activated L2
ENSG00000139343 SNRPF 311846 sc-eQTL 9.01e-01 0.0119 0.0952 0.347 B_Activated L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 1.46e-01 0.145 0.099 0.347 B_Activated L2
ENSG00000180263 FGD6 953292 sc-eQTL 8.20e-01 -0.0164 0.0718 0.347 B_Activated L2
ENSG00000028203 VEZT 953028 sc-eQTL 4.26e-01 0.0713 0.0894 0.335 B_Intermediate L2
ENSG00000059758 CDK17 -229706 sc-eQTL 3.35e-01 0.0694 0.0719 0.335 B_Intermediate L2
ENSG00000111142 METAP2 697254 sc-eQTL 4.26e-01 -0.0659 0.0825 0.335 B_Intermediate L2
ENSG00000111144 LTA4H 127254 sc-eQTL 9.94e-01 0.000513 0.0698 0.335 B_Intermediate L2
ENSG00000111145 ELK3 -23601 sc-eQTL 3.43e-02 0.166 0.0779 0.335 B_Intermediate L2
ENSG00000136014 USP44 619298 sc-eQTL 9.44e-01 -0.00649 0.0928 0.335 B_Intermediate L2
ENSG00000139343 SNRPF 311846 sc-eQTL 4.46e-01 0.0598 0.0783 0.335 B_Intermediate L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 8.87e-01 0.013 0.0918 0.335 B_Intermediate L2
ENSG00000180263 FGD6 953292 sc-eQTL 8.29e-01 0.018 0.0829 0.335 B_Intermediate L2
ENSG00000028203 VEZT 953028 sc-eQTL 7.36e-02 -0.169 0.0937 0.338 B_Memory L2
ENSG00000059758 CDK17 -229706 sc-eQTL 6.46e-01 0.0324 0.0704 0.338 B_Memory L2
ENSG00000111142 METAP2 697254 sc-eQTL 3.32e-01 -0.0888 0.0914 0.338 B_Memory L2
ENSG00000111144 LTA4H 127254 sc-eQTL 5.21e-01 -0.0523 0.0813 0.338 B_Memory L2
ENSG00000111145 ELK3 -23601 sc-eQTL 8.63e-01 0.0138 0.08 0.338 B_Memory L2
ENSG00000136014 USP44 619298 sc-eQTL 6.61e-01 0.0385 0.0877 0.338 B_Memory L2
ENSG00000139343 SNRPF 311846 sc-eQTL 2.55e-02 -0.188 0.0838 0.338 B_Memory L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 9.44e-01 -0.00664 0.0938 0.338 B_Memory L2
ENSG00000180263 FGD6 953292 sc-eQTL 7.43e-01 -0.0287 0.0873 0.338 B_Memory L2
ENSG00000028203 VEZT 953028 sc-eQTL 3.69e-01 -0.0791 0.0878 0.335 B_Naive1 L2
ENSG00000059758 CDK17 -229706 sc-eQTL 8.09e-01 -0.014 0.0578 0.335 B_Naive1 L2
ENSG00000111142 METAP2 697254 sc-eQTL 8.58e-01 -0.0134 0.0748 0.335 B_Naive1 L2
ENSG00000111144 LTA4H 127254 sc-eQTL 6.47e-01 -0.0278 0.0605 0.335 B_Naive1 L2
ENSG00000111145 ELK3 -23601 sc-eQTL 7.07e-01 -0.027 0.0716 0.335 B_Naive1 L2
ENSG00000136014 USP44 619298 sc-eQTL 4.65e-01 0.0657 0.0899 0.335 B_Naive1 L2
ENSG00000139343 SNRPF 311846 sc-eQTL 3.20e-01 -0.0693 0.0695 0.335 B_Naive1 L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 9.61e-01 -0.0044 0.0893 0.335 B_Naive1 L2
ENSG00000180263 FGD6 953292 sc-eQTL 3.10e-01 -0.0869 0.0853 0.335 B_Naive1 L2
ENSG00000028203 VEZT 953028 sc-eQTL 4.53e-01 -0.0717 0.0953 0.337 B_Naive2 L2
ENSG00000059758 CDK17 -229706 sc-eQTL 5.55e-01 0.0431 0.073 0.337 B_Naive2 L2
ENSG00000111142 METAP2 697254 sc-eQTL 8.98e-01 -0.0113 0.0882 0.337 B_Naive2 L2
ENSG00000111144 LTA4H 127254 sc-eQTL 8.88e-01 0.00978 0.0692 0.337 B_Naive2 L2
ENSG00000111145 ELK3 -23601 sc-eQTL 4.19e-01 -0.066 0.0815 0.337 B_Naive2 L2
ENSG00000136014 USP44 619298 sc-eQTL 5.82e-01 -0.0486 0.0881 0.337 B_Naive2 L2
ENSG00000139343 SNRPF 311846 sc-eQTL 5.47e-01 -0.0488 0.081 0.337 B_Naive2 L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 5.58e-01 -0.0565 0.0963 0.337 B_Naive2 L2
ENSG00000180263 FGD6 953292 sc-eQTL 1.08e-03 0.234 0.0704 0.337 B_Naive2 L2
ENSG00000028203 VEZT 953028 sc-eQTL 1.87e-01 -0.125 0.0943 0.33 CD4_CTL L2
ENSG00000059758 CDK17 -229706 sc-eQTL 6.41e-01 -0.0323 0.0691 0.33 CD4_CTL L2
ENSG00000111142 METAP2 697254 sc-eQTL 8.69e-01 0.0164 0.099 0.33 CD4_CTL L2
ENSG00000111144 LTA4H 127254 sc-eQTL 3.18e-03 0.285 0.0954 0.33 CD4_CTL L2
ENSG00000111145 ELK3 -23601 sc-eQTL 6.15e-01 -0.0497 0.0987 0.33 CD4_CTL L2
ENSG00000136014 USP44 619298 sc-eQTL 9.25e-01 0.00744 0.0788 0.33 CD4_CTL L2
ENSG00000139343 SNRPF 311846 sc-eQTL 8.68e-01 0.0143 0.0858 0.33 CD4_CTL L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 6.31e-02 -0.184 0.0984 0.33 CD4_CTL L2
ENSG00000028203 VEZT 953028 sc-eQTL 6.37e-01 -0.0332 0.0703 0.335 CD4_Naive L2
ENSG00000059758 CDK17 -229706 sc-eQTL 7.51e-01 -0.0134 0.0422 0.335 CD4_Naive L2
ENSG00000111142 METAP2 697254 sc-eQTL 8.78e-01 -0.00937 0.0609 0.335 CD4_Naive L2
ENSG00000111144 LTA4H 127254 sc-eQTL 1.45e-02 0.149 0.0602 0.335 CD4_Naive L2
ENSG00000111145 ELK3 -23601 sc-eQTL 2.23e-01 -0.0744 0.0609 0.335 CD4_Naive L2
ENSG00000136014 USP44 619298 sc-eQTL 4.62e-02 0.17 0.0848 0.335 CD4_Naive L2
ENSG00000139343 SNRPF 311846 sc-eQTL 8.39e-01 -0.0111 0.0543 0.335 CD4_Naive L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 9.76e-01 -0.00198 0.0669 0.335 CD4_Naive L2
ENSG00000028203 VEZT 953028 sc-eQTL 5.98e-01 -0.0396 0.0751 0.335 CD4_TCM L2
ENSG00000059758 CDK17 -229706 sc-eQTL 8.59e-01 -0.00737 0.0413 0.335 CD4_TCM L2
ENSG00000111142 METAP2 697254 sc-eQTL 8.47e-01 -0.0136 0.0704 0.335 CD4_TCM L2
ENSG00000111144 LTA4H 127254 sc-eQTL 3.83e-01 0.0611 0.07 0.335 CD4_TCM L2
ENSG00000111145 ELK3 -23601 sc-eQTL 3.24e-02 0.147 0.0682 0.335 CD4_TCM L2
ENSG00000136014 USP44 619298 sc-eQTL 6.88e-01 0.0383 0.0953 0.335 CD4_TCM L2
ENSG00000139343 SNRPF 311846 sc-eQTL 4.69e-01 0.041 0.0565 0.335 CD4_TCM L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 7.40e-01 -0.0256 0.0773 0.335 CD4_TCM L2
ENSG00000028203 VEZT 953028 sc-eQTL 6.12e-01 -0.0491 0.0966 0.335 CD4_TEM L2
ENSG00000059758 CDK17 -229706 sc-eQTL 1.95e-02 0.119 0.0506 0.335 CD4_TEM L2
ENSG00000111142 METAP2 697254 sc-eQTL 7.71e-01 -0.0249 0.0857 0.335 CD4_TEM L2
ENSG00000111144 LTA4H 127254 sc-eQTL 3.74e-01 -0.0704 0.079 0.335 CD4_TEM L2
ENSG00000111145 ELK3 -23601 sc-eQTL 9.38e-01 0.00573 0.0735 0.335 CD4_TEM L2
ENSG00000136014 USP44 619298 sc-eQTL 7.04e-01 0.0344 0.0904 0.335 CD4_TEM L2
ENSG00000139343 SNRPF 311846 sc-eQTL 4.02e-01 -0.0645 0.0769 0.335 CD4_TEM L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 5.55e-02 -0.174 0.0905 0.335 CD4_TEM L2
ENSG00000028203 VEZT 953028 sc-eQTL 1.99e-01 -0.109 0.0845 0.335 CD8_CTL L2
ENSG00000059758 CDK17 -229706 sc-eQTL 3.62e-01 -0.0448 0.049 0.335 CD8_CTL L2
ENSG00000111142 METAP2 697254 sc-eQTL 4.83e-01 -0.0596 0.0848 0.335 CD8_CTL L2
ENSG00000111144 LTA4H 127254 sc-eQTL 9.74e-02 0.147 0.0881 0.335 CD8_CTL L2
ENSG00000111145 ELK3 -23601 sc-eQTL 6.64e-01 -0.0351 0.0807 0.335 CD8_CTL L2
ENSG00000136014 USP44 619298 sc-eQTL 9.81e-01 -0.00209 0.09 0.335 CD8_CTL L2
ENSG00000139343 SNRPF 311846 sc-eQTL 2.47e-01 -0.0859 0.074 0.335 CD8_CTL L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 5.69e-01 0.0474 0.0832 0.335 CD8_CTL L2
ENSG00000028203 VEZT 953028 sc-eQTL 4.54e-02 0.174 0.0862 0.335 CD8_Naive L2
ENSG00000059758 CDK17 -229706 sc-eQTL 5.56e-01 -0.0349 0.0592 0.335 CD8_Naive L2
ENSG00000111142 METAP2 697254 sc-eQTL 9.47e-01 0.00523 0.0788 0.335 CD8_Naive L2
ENSG00000111144 LTA4H 127254 sc-eQTL 8.59e-01 0.0126 0.071 0.335 CD8_Naive L2
ENSG00000111145 ELK3 -23601 sc-eQTL 3.93e-01 -0.0643 0.075 0.335 CD8_Naive L2
ENSG00000136014 USP44 619298 sc-eQTL 3.59e-01 0.0725 0.0787 0.335 CD8_Naive L2
ENSG00000139343 SNRPF 311846 sc-eQTL 7.73e-01 -0.0195 0.0675 0.335 CD8_Naive L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 7.54e-01 -0.0253 0.0804 0.335 CD8_Naive L2
ENSG00000028203 VEZT 953028 sc-eQTL 2.88e-01 -0.104 0.0978 0.336 CD8_TCM L2
ENSG00000059758 CDK17 -229706 sc-eQTL 7.97e-01 0.0172 0.0666 0.336 CD8_TCM L2
ENSG00000111142 METAP2 697254 sc-eQTL 5.75e-01 0.0558 0.0994 0.336 CD8_TCM L2
ENSG00000111144 LTA4H 127254 sc-eQTL 5.48e-01 0.0589 0.0978 0.336 CD8_TCM L2
ENSG00000111145 ELK3 -23601 sc-eQTL 1.28e-01 -0.126 0.0824 0.336 CD8_TCM L2
ENSG00000136014 USP44 619298 sc-eQTL 3.11e-01 0.0909 0.0896 0.336 CD8_TCM L2
ENSG00000139343 SNRPF 311846 sc-eQTL 7.88e-01 0.0257 0.0955 0.336 CD8_TCM L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 6.08e-01 0.048 0.0935 0.336 CD8_TCM L2
ENSG00000028203 VEZT 953028 sc-eQTL 9.27e-01 0.00906 0.0991 0.32 CD8_TEM L2
ENSG00000059758 CDK17 -229706 sc-eQTL 9.68e-01 0.0033 0.0819 0.32 CD8_TEM L2
ENSG00000111142 METAP2 697254 sc-eQTL 2.14e-02 0.22 0.0949 0.32 CD8_TEM L2
ENSG00000111144 LTA4H 127254 sc-eQTL 9.06e-01 -0.0118 0.1 0.32 CD8_TEM L2
ENSG00000111145 ELK3 -23601 sc-eQTL 9.33e-01 0.00834 0.0986 0.32 CD8_TEM L2
ENSG00000136014 USP44 619298 sc-eQTL 7.65e-01 -0.0252 0.0839 0.32 CD8_TEM L2
ENSG00000139343 SNRPF 311846 sc-eQTL 7.05e-01 0.0347 0.0916 0.32 CD8_TEM L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 6.76e-01 0.0416 0.0995 0.32 CD8_TEM L2
ENSG00000028203 VEZT 953028 sc-eQTL 9.53e-01 0.00556 0.0948 0.331 MAIT L2
ENSG00000059758 CDK17 -229706 sc-eQTL 3.01e-01 0.0562 0.0542 0.331 MAIT L2
ENSG00000074527 NTN4 379622 sc-eQTL 4.54e-01 -0.0548 0.0731 0.331 MAIT L2
ENSG00000111142 METAP2 697254 sc-eQTL 7.60e-01 0.0282 0.0921 0.331 MAIT L2
ENSG00000111144 LTA4H 127254 sc-eQTL 6.46e-01 -0.0386 0.0838 0.331 MAIT L2
ENSG00000111145 ELK3 -23601 sc-eQTL 9.65e-01 0.00311 0.0704 0.331 MAIT L2
ENSG00000139343 SNRPF 311846 sc-eQTL 5.80e-01 -0.0452 0.0815 0.331 MAIT L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 1.56e-01 0.13 0.0911 0.331 MAIT L2
ENSG00000188596 CFAP54 -318797 sc-eQTL 5.93e-01 0.0485 0.0907 0.331 MAIT L2
ENSG00000028203 VEZT 953028 sc-eQTL 2.96e-01 0.0988 0.0943 0.331 NK_CD56bright L2
ENSG00000059758 CDK17 -229706 sc-eQTL 4.75e-01 0.0394 0.055 0.331 NK_CD56bright L2
ENSG00000111142 METAP2 697254 sc-eQTL 4.52e-01 0.0699 0.0929 0.331 NK_CD56bright L2
ENSG00000111144 LTA4H 127254 sc-eQTL 2.84e-01 0.0874 0.0813 0.331 NK_CD56bright L2
ENSG00000111145 ELK3 -23601 sc-eQTL 2.35e-01 -0.103 0.0862 0.331 NK_CD56bright L2
ENSG00000139343 SNRPF 311846 sc-eQTL 1.55e-02 -0.218 0.0892 0.331 NK_CD56bright L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 3.29e-02 -0.194 0.0903 0.331 NK_CD56bright L2
ENSG00000028203 VEZT 953028 sc-eQTL 9.20e-01 -0.00929 0.0918 0.334 NK_CD56dim L2
ENSG00000059758 CDK17 -229706 sc-eQTL 5.66e-02 -0.0898 0.0469 0.334 NK_CD56dim L2
ENSG00000111142 METAP2 697254 sc-eQTL 9.25e-01 0.00785 0.0828 0.334 NK_CD56dim L2
ENSG00000111144 LTA4H 127254 sc-eQTL 3.76e-01 0.0756 0.0852 0.334 NK_CD56dim L2
ENSG00000111145 ELK3 -23601 sc-eQTL 7.29e-01 -0.0262 0.0756 0.334 NK_CD56dim L2
ENSG00000139343 SNRPF 311846 sc-eQTL 6.67e-01 -0.031 0.0719 0.334 NK_CD56dim L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 9.51e-01 -0.00506 0.0829 0.334 NK_CD56dim L2
ENSG00000028203 VEZT 953028 sc-eQTL 1.88e-01 0.131 0.099 0.338 NK_HLA L2
ENSG00000059758 CDK17 -229706 sc-eQTL 7.92e-01 -0.0194 0.0736 0.338 NK_HLA L2
ENSG00000111142 METAP2 697254 sc-eQTL 6.06e-01 -0.0478 0.0926 0.338 NK_HLA L2
ENSG00000111144 LTA4H 127254 sc-eQTL 1.40e-01 0.142 0.0959 0.338 NK_HLA L2
ENSG00000111145 ELK3 -23601 sc-eQTL 5.30e-01 -0.0563 0.0894 0.338 NK_HLA L2
ENSG00000139343 SNRPF 311846 sc-eQTL 5.88e-01 -0.0506 0.0932 0.338 NK_HLA L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 8.16e-01 -0.0205 0.0882 0.338 NK_HLA L2
ENSG00000028203 VEZT 953028 sc-eQTL 8.17e-01 0.0195 0.0843 0.334 NK_cytokine L2
ENSG00000059758 CDK17 -229706 sc-eQTL 6.73e-02 -0.094 0.0511 0.334 NK_cytokine L2
ENSG00000111142 METAP2 697254 sc-eQTL 1.57e-01 -0.121 0.0852 0.334 NK_cytokine L2
ENSG00000111144 LTA4H 127254 sc-eQTL 1.94e-01 0.113 0.0868 0.334 NK_cytokine L2
ENSG00000111145 ELK3 -23601 sc-eQTL 7.72e-01 0.0242 0.0834 0.334 NK_cytokine L2
ENSG00000139343 SNRPF 311846 sc-eQTL 4.49e-01 -0.0535 0.0705 0.334 NK_cytokine L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 5.89e-01 -0.0472 0.0873 0.334 NK_cytokine L2
ENSG00000028203 VEZT 953028 sc-eQTL 8.11e-01 0.0286 0.12 0.337 PB L2
ENSG00000059758 CDK17 -229706 sc-eQTL 4.02e-01 -0.0857 0.102 0.337 PB L2
ENSG00000111142 METAP2 697254 sc-eQTL 1.61e-01 -0.167 0.118 0.337 PB L2
ENSG00000111144 LTA4H 127254 sc-eQTL 1.26e-02 0.222 0.0877 0.337 PB L2
ENSG00000111145 ELK3 -23601 sc-eQTL 1.11e-01 -0.184 0.114 0.337 PB L2
ENSG00000136014 USP44 619298 sc-eQTL 2.66e-01 0.119 0.106 0.337 PB L2
ENSG00000139343 SNRPF 311846 sc-eQTL 7.64e-01 0.0339 0.113 0.337 PB L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 1.04e-01 0.217 0.132 0.337 PB L2
ENSG00000180263 FGD6 953292 sc-eQTL 3.79e-02 -0.197 0.0937 0.337 PB L2
ENSG00000028203 VEZT 953028 sc-eQTL 4.26e-01 -0.0713 0.0895 0.337 Pro_T L2
ENSG00000059758 CDK17 -229706 sc-eQTL 3.04e-01 0.0597 0.0579 0.337 Pro_T L2
ENSG00000074527 NTN4 379622 sc-eQTL 2.18e-01 -0.0802 0.0649 0.337 Pro_T L2
ENSG00000111142 METAP2 697254 sc-eQTL 9.14e-01 0.00834 0.0769 0.337 Pro_T L2
ENSG00000111144 LTA4H 127254 sc-eQTL 4.00e-01 0.0646 0.0765 0.337 Pro_T L2
ENSG00000111145 ELK3 -23601 sc-eQTL 7.76e-01 -0.0264 0.0927 0.337 Pro_T L2
ENSG00000139343 SNRPF 311846 sc-eQTL 1.66e-01 0.0808 0.0582 0.337 Pro_T L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 9.86e-01 -0.00148 0.0849 0.337 Pro_T L2
ENSG00000188596 CFAP54 -318797 sc-eQTL 7.96e-01 0.0178 0.0686 0.337 Pro_T L2
ENSG00000028203 VEZT 953028 sc-eQTL 5.70e-01 0.0522 0.0918 0.335 Treg L2
ENSG00000059758 CDK17 -229706 sc-eQTL 7.75e-02 0.112 0.0633 0.335 Treg L2
ENSG00000111142 METAP2 697254 sc-eQTL 3.91e-01 -0.0744 0.0866 0.335 Treg L2
ENSG00000111144 LTA4H 127254 sc-eQTL 1.14e-01 0.127 0.0802 0.335 Treg L2
ENSG00000111145 ELK3 -23601 sc-eQTL 4.23e-01 -0.0586 0.073 0.335 Treg L2
ENSG00000136014 USP44 619298 sc-eQTL 6.51e-01 -0.0372 0.0821 0.335 Treg L2
ENSG00000139343 SNRPF 311846 sc-eQTL 7.34e-01 -0.0288 0.0847 0.335 Treg L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 4.26e-01 0.0753 0.0944 0.335 Treg L2
ENSG00000028203 VEZT 953028 sc-eQTL 2.60e-01 0.101 0.0893 0.346 cDC L2
ENSG00000059758 CDK17 -229706 sc-eQTL 2.30e-02 -0.177 0.0772 0.346 cDC L2
ENSG00000084110 HAL 174409 sc-eQTL 3.93e-02 0.167 0.0804 0.346 cDC L2
ENSG00000111142 METAP2 697254 sc-eQTL 4.73e-01 -0.0705 0.0981 0.346 cDC L2
ENSG00000111144 LTA4H 127254 sc-eQTL 9.35e-01 -0.00566 0.0697 0.346 cDC L2
ENSG00000111145 ELK3 -23601 sc-eQTL 3.39e-01 0.0879 0.0918 0.346 cDC L2
ENSG00000139343 SNRPF 311846 sc-eQTL 8.05e-01 -0.0191 0.077 0.346 cDC L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 1.99e-01 0.121 0.0934 0.346 cDC L2
ENSG00000180263 FGD6 953292 sc-eQTL 2.17e-01 0.112 0.0905 0.346 cDC L2
ENSG00000257715 AC007298.1 145451 sc-eQTL 6.15e-01 0.0398 0.0791 0.346 cDC L2
ENSG00000028203 VEZT 953028 sc-eQTL 1.84e-01 -0.119 0.0893 0.335 cMono_IL1B L2
ENSG00000059758 CDK17 -229706 sc-eQTL 9.38e-01 0.00531 0.0684 0.335 cMono_IL1B L2
ENSG00000084110 HAL 174409 sc-eQTL 2.60e-01 -0.0841 0.0744 0.335 cMono_IL1B L2
ENSG00000111142 METAP2 697254 sc-eQTL 2.52e-01 -0.0886 0.0772 0.335 cMono_IL1B L2
ENSG00000111144 LTA4H 127254 sc-eQTL 1.73e-01 0.11 0.0803 0.335 cMono_IL1B L2
ENSG00000111145 ELK3 -23601 sc-eQTL 5.07e-01 0.0412 0.0621 0.335 cMono_IL1B L2
ENSG00000139343 SNRPF 311846 sc-eQTL 5.00e-01 0.0432 0.064 0.335 cMono_IL1B L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 9.42e-01 0.0064 0.0883 0.335 cMono_IL1B L2
ENSG00000180263 FGD6 953292 sc-eQTL 9.76e-01 0.0022 0.0723 0.335 cMono_IL1B L2
ENSG00000257715 AC007298.1 145451 sc-eQTL 8.45e-01 0.0162 0.0824 0.335 cMono_IL1B L2
ENSG00000028203 VEZT 953028 sc-eQTL 3.08e-02 -0.196 0.0902 0.335 cMono_S100A L2
ENSG00000059758 CDK17 -229706 sc-eQTL 6.78e-01 0.0323 0.0776 0.335 cMono_S100A L2
ENSG00000084110 HAL 174409 sc-eQTL 3.47e-01 -0.0819 0.0869 0.335 cMono_S100A L2
ENSG00000111142 METAP2 697254 sc-eQTL 3.46e-01 -0.083 0.088 0.335 cMono_S100A L2
ENSG00000111144 LTA4H 127254 sc-eQTL 3.28e-01 0.0852 0.0868 0.335 cMono_S100A L2
ENSG00000111145 ELK3 -23601 sc-eQTL 5.16e-01 0.046 0.0708 0.335 cMono_S100A L2
ENSG00000139343 SNRPF 311846 sc-eQTL 3.24e-01 0.0691 0.0699 0.335 cMono_S100A L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 4.41e-01 -0.0728 0.0944 0.335 cMono_S100A L2
ENSG00000180263 FGD6 953292 sc-eQTL 9.28e-01 0.00763 0.0843 0.335 cMono_S100A L2
ENSG00000257715 AC007298.1 145451 sc-eQTL 6.78e-01 0.037 0.089 0.335 cMono_S100A L2
ENSG00000028203 VEZT 953028 sc-eQTL 5.73e-01 0.0675 0.12 0.333 gdT L2
ENSG00000059758 CDK17 -229706 sc-eQTL 6.86e-02 -0.144 0.0783 0.333 gdT L2
ENSG00000074527 NTN4 379622 sc-eQTL 5.06e-01 -0.0605 0.0908 0.333 gdT L2
ENSG00000111142 METAP2 697254 sc-eQTL 4.52e-01 0.0856 0.114 0.333 gdT L2
ENSG00000111144 LTA4H 127254 sc-eQTL 3.67e-01 0.107 0.118 0.333 gdT L2
ENSG00000111145 ELK3 -23601 sc-eQTL 7.25e-01 0.0387 0.11 0.333 gdT L2
ENSG00000139343 SNRPF 311846 sc-eQTL 5.50e-01 0.0634 0.106 0.333 gdT L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 8.85e-01 -0.0169 0.117 0.333 gdT L2
ENSG00000188596 CFAP54 -318797 sc-eQTL 5.73e-01 -0.0579 0.102 0.333 gdT L2
ENSG00000028203 VEZT 953028 sc-eQTL 3.42e-01 0.0955 0.1 0.329 intMono L2
ENSG00000059758 CDK17 -229706 sc-eQTL 3.63e-03 -0.257 0.0874 0.329 intMono L2
ENSG00000084110 HAL 174409 sc-eQTL 7.12e-01 -0.0333 0.0902 0.329 intMono L2
ENSG00000111142 METAP2 697254 sc-eQTL 7.11e-01 -0.0379 0.102 0.329 intMono L2
ENSG00000111144 LTA4H 127254 sc-eQTL 5.67e-01 0.0531 0.0925 0.329 intMono L2
ENSG00000111145 ELK3 -23601 sc-eQTL 3.42e-01 0.0784 0.0823 0.329 intMono L2
ENSG00000139343 SNRPF 311846 sc-eQTL 1.31e-01 0.133 0.0876 0.329 intMono L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 3.50e-01 0.0856 0.0914 0.329 intMono L2
ENSG00000180263 FGD6 953292 sc-eQTL 4.60e-01 -0.0656 0.0887 0.329 intMono L2
ENSG00000257715 AC007298.1 145451 sc-eQTL 2.81e-01 -0.0994 0.0918 0.329 intMono L2
ENSG00000028203 VEZT 953028 sc-eQTL 2.48e-01 -0.103 0.0887 0.335 ncMono L2
ENSG00000059758 CDK17 -229706 sc-eQTL 9.57e-02 -0.115 0.0688 0.335 ncMono L2
ENSG00000084110 HAL 174409 sc-eQTL 6.27e-01 -0.0376 0.0773 0.335 ncMono L2
ENSG00000111142 METAP2 697254 sc-eQTL 7.17e-01 -0.034 0.0934 0.335 ncMono L2
ENSG00000111144 LTA4H 127254 sc-eQTL 4.08e-01 0.0713 0.086 0.335 ncMono L2
ENSG00000111145 ELK3 -23601 sc-eQTL 2.59e-01 -0.0835 0.0738 0.335 ncMono L2
ENSG00000139343 SNRPF 311846 sc-eQTL 6.96e-01 0.0296 0.0756 0.335 ncMono L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 4.19e-01 -0.0649 0.0801 0.335 ncMono L2
ENSG00000180263 FGD6 953292 sc-eQTL 9.78e-01 -0.00242 0.0879 0.335 ncMono L2
ENSG00000257715 AC007298.1 145451 sc-eQTL 7.03e-01 0.035 0.0916 0.335 ncMono L2
ENSG00000028203 VEZT 953028 sc-eQTL 4.32e-01 -0.0794 0.101 0.345 pDC L2
ENSG00000059758 CDK17 -229706 sc-eQTL 9.73e-03 -0.232 0.0885 0.345 pDC L2
ENSG00000084110 HAL 174409 sc-eQTL 6.14e-01 0.0386 0.0763 0.345 pDC L2
ENSG00000111142 METAP2 697254 sc-eQTL 2.72e-01 -0.113 0.103 0.345 pDC L2
ENSG00000111144 LTA4H 127254 sc-eQTL 8.94e-01 -0.0114 0.0855 0.345 pDC L2
ENSG00000111145 ELK3 -23601 sc-eQTL 9.33e-01 0.00881 0.105 0.345 pDC L2
ENSG00000139343 SNRPF 311846 sc-eQTL 1.51e-01 0.131 0.0906 0.345 pDC L2
ENSG00000139350 NEDD1 -736449 sc-eQTL 7.99e-01 -0.0257 0.101 0.345 pDC L2
ENSG00000180263 FGD6 953292 sc-eQTL 8.13e-01 -0.021 0.0887 0.345 pDC L2
ENSG00000257715 AC007298.1 145451 sc-eQTL 7.92e-01 -0.0228 0.0863 0.345 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 953028 sc-eQTL 4.66e-01 -0.0664 0.0909 0.335 B_Memory LOneK1K
ENSG00000059758 CDK17 -229706 sc-eQTL 3.40e-01 0.0582 0.0608 0.335 B_Memory LOneK1K
ENSG00000111142 METAP2 697254 sc-eQTL 4.52e-02 -0.169 0.084 0.335 B_Memory LOneK1K
ENSG00000111144 LTA4H 127254 sc-eQTL 9.19e-01 -0.00643 0.0633 0.335 B_Memory LOneK1K
ENSG00000111145 ELK3 -23601 sc-eQTL 5.89e-02 0.136 0.0717 0.335 B_Memory LOneK1K
ENSG00000136014 USP44 619298 sc-eQTL 5.12e-01 0.0592 0.0901 0.335 B_Memory LOneK1K
ENSG00000139343 SNRPF 311846 sc-eQTL 1.18e-01 -0.109 0.0697 0.335 B_Memory LOneK1K
ENSG00000139350 NEDD1 -736449 sc-eQTL 5.40e-01 0.0564 0.0919 0.335 B_Memory LOneK1K
ENSG00000180263 FGD6 953292 sc-eQTL 8.09e-01 -0.0196 0.0807 0.335 B_Memory LOneK1K
ENSG00000028203 VEZT 953028 sc-eQTL 4.47e-01 -0.0638 0.0837 0.335 B_Naive LOneK1K
ENSG00000059758 CDK17 -229706 sc-eQTL 6.40e-01 0.0242 0.0517 0.335 B_Naive LOneK1K
ENSG00000111142 METAP2 697254 sc-eQTL 6.18e-01 -0.0349 0.0699 0.335 B_Naive LOneK1K
ENSG00000111144 LTA4H 127254 sc-eQTL 9.12e-01 -0.00641 0.058 0.335 B_Naive LOneK1K
ENSG00000111145 ELK3 -23601 sc-eQTL 5.03e-01 -0.0443 0.066 0.335 B_Naive LOneK1K
ENSG00000136014 USP44 619298 sc-eQTL 8.25e-01 0.0178 0.0808 0.335 B_Naive LOneK1K
ENSG00000139343 SNRPF 311846 sc-eQTL 4.15e-01 -0.0542 0.0664 0.335 B_Naive LOneK1K
ENSG00000139350 NEDD1 -736449 sc-eQTL 4.13e-01 -0.0721 0.0879 0.335 B_Naive LOneK1K
ENSG00000180263 FGD6 953292 sc-eQTL 5.45e-01 0.0538 0.0887 0.335 B_Naive LOneK1K
ENSG00000028203 VEZT 953028 sc-eQTL 2.46e-02 -0.183 0.0808 0.335 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -229706 sc-eQTL 6.02e-01 0.032 0.0613 0.335 CD14_Mono LOneK1K
ENSG00000084110 HAL 174409 sc-eQTL 3.33e-01 -0.0719 0.0741 0.335 CD14_Mono LOneK1K
ENSG00000111142 METAP2 697254 sc-eQTL 7.42e-02 -0.125 0.0694 0.335 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 127254 sc-eQTL 3.47e-01 0.0767 0.0814 0.335 CD14_Mono LOneK1K
ENSG00000111145 ELK3 -23601 sc-eQTL 2.52e-01 0.0675 0.0587 0.335 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 311846 sc-eQTL 1.80e-01 0.0761 0.0566 0.335 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -736449 sc-eQTL 5.86e-01 -0.0486 0.0891 0.335 CD14_Mono LOneK1K
ENSG00000180263 FGD6 953292 sc-eQTL 7.19e-01 0.0255 0.0707 0.335 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 145451 sc-eQTL 6.08e-01 0.0424 0.0825 0.335 CD14_Mono LOneK1K
ENSG00000028203 VEZT 953028 sc-eQTL 5.46e-01 -0.0559 0.0926 0.334 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -229706 sc-eQTL 4.03e-02 -0.129 0.0626 0.334 CD16_Mono LOneK1K
ENSG00000084110 HAL 174409 sc-eQTL 6.70e-01 -0.0319 0.0748 0.334 CD16_Mono LOneK1K
ENSG00000111142 METAP2 697254 sc-eQTL 5.47e-01 -0.0512 0.0848 0.334 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 127254 sc-eQTL 3.32e-01 0.0804 0.0828 0.334 CD16_Mono LOneK1K
ENSG00000111145 ELK3 -23601 sc-eQTL 6.53e-01 0.0276 0.0613 0.334 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 311846 sc-eQTL 4.13e-01 0.0518 0.0632 0.334 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -736449 sc-eQTL 8.23e-01 0.0182 0.0812 0.334 CD16_Mono LOneK1K
ENSG00000180263 FGD6 953292 sc-eQTL 5.97e-01 -0.0412 0.0777 0.334 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 145451 sc-eQTL 7.67e-01 0.0255 0.0859 0.334 CD16_Mono LOneK1K
ENSG00000028203 VEZT 953028 sc-eQTL 6.71e-01 0.0358 0.084 0.334 NK_CD56dim LOneK1K
ENSG00000059758 CDK17 -229706 sc-eQTL 1.87e-02 -0.103 0.0435 0.334 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 697254 sc-eQTL 2.29e-01 -0.0808 0.0669 0.334 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 127254 sc-eQTL 1.63e-01 0.107 0.0764 0.334 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 -23601 sc-eQTL 5.22e-01 -0.045 0.0702 0.334 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 311846 sc-eQTL 2.61e-01 -0.0675 0.0599 0.334 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -736449 sc-eQTL 9.79e-01 -0.00197 0.0749 0.334 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111145 ELK3 -23601 eQTL 8.08e-05 0.0683 0.0173 0.0 0.0 0.35
ENSG00000139350 NEDD1 -736449 eQTL 0.0371 -0.0504 0.0241 0.0 0.0 0.35

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina