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Genes within 1Mb (chr12:96170747:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 953001 sc-eQTL 2.85e-01 -0.0795 0.0742 0.338 B L1
ENSG00000059758 CDK17 -229733 sc-eQTL 7.59e-01 0.0142 0.0463 0.338 B L1
ENSG00000111142 METAP2 697227 sc-eQTL 3.36e-01 -0.063 0.0653 0.338 B L1
ENSG00000111144 LTA4H 127227 sc-eQTL 7.49e-01 0.0184 0.0575 0.338 B L1
ENSG00000111145 ELK3 -23628 sc-eQTL 8.08e-01 0.0149 0.0612 0.338 B L1
ENSG00000136014 USP44 619271 sc-eQTL 6.64e-01 0.0328 0.0754 0.338 B L1
ENSG00000139343 SNRPF 311819 sc-eQTL 4.52e-01 -0.0418 0.0555 0.338 B L1
ENSG00000139350 NEDD1 -736476 sc-eQTL 1.40e-01 -0.12 0.0807 0.338 B L1
ENSG00000180263 FGD6 953265 sc-eQTL 6.33e-01 -0.0362 0.0756 0.338 B L1
ENSG00000028203 VEZT 953001 sc-eQTL 6.85e-01 -0.0251 0.0619 0.338 CD4T L1
ENSG00000059758 CDK17 -229733 sc-eQTL 7.00e-01 0.0149 0.0385 0.338 CD4T L1
ENSG00000111142 METAP2 697227 sc-eQTL 7.51e-01 -0.0171 0.0538 0.338 CD4T L1
ENSG00000111144 LTA4H 127227 sc-eQTL 3.61e-02 0.111 0.0524 0.338 CD4T L1
ENSG00000111145 ELK3 -23628 sc-eQTL 9.06e-01 0.00681 0.0573 0.338 CD4T L1
ENSG00000136014 USP44 619271 sc-eQTL 5.75e-02 0.155 0.0811 0.338 CD4T L1
ENSG00000139343 SNRPF 311819 sc-eQTL 9.25e-01 -0.00475 0.0501 0.338 CD4T L1
ENSG00000139350 NEDD1 -736476 sc-eQTL 5.73e-01 -0.0348 0.0617 0.338 CD4T L1
ENSG00000028203 VEZT 953001 sc-eQTL 8.74e-01 0.0118 0.0745 0.338 CD8T L1
ENSG00000059758 CDK17 -229733 sc-eQTL 7.14e-01 -0.0145 0.0395 0.338 CD8T L1
ENSG00000111142 METAP2 697227 sc-eQTL 8.09e-01 0.0154 0.0637 0.338 CD8T L1
ENSG00000111144 LTA4H 127227 sc-eQTL 1.11e-01 0.0675 0.0421 0.338 CD8T L1
ENSG00000111145 ELK3 -23628 sc-eQTL 8.66e-02 -0.109 0.0634 0.338 CD8T L1
ENSG00000136014 USP44 619271 sc-eQTL 6.95e-01 0.0285 0.0726 0.338 CD8T L1
ENSG00000139343 SNRPF 311819 sc-eQTL 1.26e-01 -0.0798 0.052 0.338 CD8T L1
ENSG00000139350 NEDD1 -736476 sc-eQTL 5.08e-01 0.046 0.0694 0.338 CD8T L1
ENSG00000028203 VEZT 953001 sc-eQTL 6.02e-01 0.0459 0.0878 0.345 DC L1
ENSG00000059758 CDK17 -229733 sc-eQTL 1.97e-02 -0.17 0.0725 0.345 DC L1
ENSG00000084110 HAL 174382 sc-eQTL 1.89e-01 0.11 0.0833 0.345 DC L1
ENSG00000111142 METAP2 697227 sc-eQTL 1.01e-01 -0.151 0.0916 0.345 DC L1
ENSG00000111144 LTA4H 127227 sc-eQTL 6.70e-01 0.0292 0.0684 0.345 DC L1
ENSG00000111145 ELK3 -23628 sc-eQTL 8.39e-01 -0.0171 0.0838 0.345 DC L1
ENSG00000139343 SNRPF 311819 sc-eQTL 5.99e-01 0.0367 0.0696 0.345 DC L1
ENSG00000139350 NEDD1 -736476 sc-eQTL 8.74e-01 -0.0142 0.0894 0.345 DC L1
ENSG00000180263 FGD6 953265 sc-eQTL 4.23e-01 0.0663 0.0825 0.345 DC L1
ENSG00000257715 AC007298.1 145424 sc-eQTL 6.83e-01 0.033 0.0807 0.345 DC L1
ENSG00000028203 VEZT 953001 sc-eQTL 3.75e-02 -0.168 0.0803 0.338 Mono L1
ENSG00000059758 CDK17 -229733 sc-eQTL 8.70e-01 0.00973 0.0594 0.338 Mono L1
ENSG00000084110 HAL 174382 sc-eQTL 2.79e-01 -0.081 0.0746 0.338 Mono L1
ENSG00000111142 METAP2 697227 sc-eQTL 1.50e-01 -0.0929 0.0643 0.338 Mono L1
ENSG00000111144 LTA4H 127227 sc-eQTL 3.77e-01 0.0747 0.0843 0.338 Mono L1
ENSG00000111145 ELK3 -23628 sc-eQTL 2.62e-01 0.0637 0.0566 0.338 Mono L1
ENSG00000139343 SNRPF 311819 sc-eQTL 2.34e-01 0.0636 0.0533 0.338 Mono L1
ENSG00000139350 NEDD1 -736476 sc-eQTL 4.92e-01 -0.0564 0.082 0.338 Mono L1
ENSG00000180263 FGD6 953265 sc-eQTL 9.46e-01 -0.00467 0.0688 0.338 Mono L1
ENSG00000257715 AC007298.1 145424 sc-eQTL 5.11e-01 0.0524 0.0795 0.338 Mono L1
ENSG00000028203 VEZT 953001 sc-eQTL 4.30e-01 0.0646 0.0817 0.337 NK L1
ENSG00000059758 CDK17 -229733 sc-eQTL 2.35e-02 -0.0985 0.0432 0.337 NK L1
ENSG00000111142 METAP2 697227 sc-eQTL 4.96e-01 -0.0441 0.0646 0.337 NK L1
ENSG00000111144 LTA4H 127227 sc-eQTL 2.99e-01 0.077 0.074 0.337 NK L1
ENSG00000111145 ELK3 -23628 sc-eQTL 2.07e-01 -0.0887 0.0701 0.337 NK L1
ENSG00000139343 SNRPF 311819 sc-eQTL 1.36e-01 -0.0869 0.0581 0.337 NK L1
ENSG00000139350 NEDD1 -736476 sc-eQTL 5.36e-01 -0.0457 0.0738 0.337 NK L1
ENSG00000028203 VEZT 953001 sc-eQTL 2.12e-01 -0.114 0.0909 0.338 Other_T L1
ENSG00000059758 CDK17 -229733 sc-eQTL 9.30e-01 -0.00328 0.0372 0.338 Other_T L1
ENSG00000074527 NTN4 379595 sc-eQTL 9.86e-01 -0.00118 0.0687 0.338 Other_T L1
ENSG00000111142 METAP2 697227 sc-eQTL 2.25e-01 0.086 0.0707 0.338 Other_T L1
ENSG00000111144 LTA4H 127227 sc-eQTL 4.71e-01 0.056 0.0776 0.338 Other_T L1
ENSG00000111145 ELK3 -23628 sc-eQTL 7.19e-01 0.0218 0.0606 0.338 Other_T L1
ENSG00000139343 SNRPF 311819 sc-eQTL 2.07e-01 0.071 0.0561 0.338 Other_T L1
ENSG00000139350 NEDD1 -736476 sc-eQTL 7.43e-01 0.0282 0.0857 0.338 Other_T L1
ENSG00000188596 CFAP54 -318824 sc-eQTL 4.98e-01 -0.0602 0.0887 0.338 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 953001 sc-eQTL 7.52e-01 -0.0322 0.102 0.349 B_Activated L2
ENSG00000059758 CDK17 -229733 sc-eQTL 8.49e-01 -0.0161 0.0842 0.349 B_Activated L2
ENSG00000111142 METAP2 697227 sc-eQTL 4.50e-01 -0.08 0.106 0.349 B_Activated L2
ENSG00000111144 LTA4H 127227 sc-eQTL 1.92e-01 0.124 0.0949 0.349 B_Activated L2
ENSG00000111145 ELK3 -23628 sc-eQTL 4.09e-01 -0.0834 0.101 0.349 B_Activated L2
ENSG00000136014 USP44 619271 sc-eQTL 5.59e-01 0.0454 0.0774 0.349 B_Activated L2
ENSG00000139343 SNRPF 311819 sc-eQTL 8.77e-01 0.0147 0.0952 0.349 B_Activated L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 1.62e-01 0.139 0.099 0.349 B_Activated L2
ENSG00000180263 FGD6 953265 sc-eQTL 8.13e-01 -0.017 0.0718 0.349 B_Activated L2
ENSG00000028203 VEZT 953001 sc-eQTL 4.86e-01 0.0624 0.0894 0.337 B_Intermediate L2
ENSG00000059758 CDK17 -229733 sc-eQTL 3.50e-01 0.0674 0.0719 0.337 B_Intermediate L2
ENSG00000111142 METAP2 697227 sc-eQTL 4.28e-01 -0.0656 0.0825 0.337 B_Intermediate L2
ENSG00000111144 LTA4H 127227 sc-eQTL 9.88e-01 0.00109 0.0698 0.337 B_Intermediate L2
ENSG00000111145 ELK3 -23628 sc-eQTL 4.01e-02 0.161 0.0779 0.337 B_Intermediate L2
ENSG00000136014 USP44 619271 sc-eQTL 8.91e-01 -0.0127 0.0928 0.337 B_Intermediate L2
ENSG00000139343 SNRPF 311819 sc-eQTL 4.46e-01 0.0597 0.0783 0.337 B_Intermediate L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 9.20e-01 0.00923 0.0918 0.337 B_Intermediate L2
ENSG00000180263 FGD6 953265 sc-eQTL 8.06e-01 0.0203 0.0829 0.337 B_Intermediate L2
ENSG00000028203 VEZT 953001 sc-eQTL 1.16e-01 -0.148 0.0939 0.341 B_Memory L2
ENSG00000059758 CDK17 -229733 sc-eQTL 5.83e-01 0.0388 0.0705 0.341 B_Memory L2
ENSG00000111142 METAP2 697227 sc-eQTL 3.89e-01 -0.079 0.0915 0.341 B_Memory L2
ENSG00000111144 LTA4H 127227 sc-eQTL 4.96e-01 -0.0554 0.0813 0.341 B_Memory L2
ENSG00000111145 ELK3 -23628 sc-eQTL 8.51e-01 0.0151 0.08 0.341 B_Memory L2
ENSG00000136014 USP44 619271 sc-eQTL 6.59e-01 0.0388 0.0878 0.341 B_Memory L2
ENSG00000139343 SNRPF 311819 sc-eQTL 2.39e-02 -0.191 0.0838 0.341 B_Memory L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 9.21e-01 -0.00931 0.0938 0.341 B_Memory L2
ENSG00000180263 FGD6 953265 sc-eQTL 8.15e-01 -0.0205 0.0873 0.341 B_Memory L2
ENSG00000028203 VEZT 953001 sc-eQTL 3.24e-01 -0.0869 0.088 0.338 B_Naive1 L2
ENSG00000059758 CDK17 -229733 sc-eQTL 8.07e-01 -0.0141 0.058 0.338 B_Naive1 L2
ENSG00000111142 METAP2 697227 sc-eQTL 9.46e-01 -0.00511 0.075 0.338 B_Naive1 L2
ENSG00000111144 LTA4H 127227 sc-eQTL 6.83e-01 -0.0248 0.0607 0.338 B_Naive1 L2
ENSG00000111145 ELK3 -23628 sc-eQTL 6.67e-01 -0.0309 0.0717 0.338 B_Naive1 L2
ENSG00000136014 USP44 619271 sc-eQTL 4.23e-01 0.0723 0.0901 0.338 B_Naive1 L2
ENSG00000139343 SNRPF 311819 sc-eQTL 2.99e-01 -0.0725 0.0696 0.338 B_Naive1 L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 8.98e-01 -0.0115 0.0896 0.338 B_Naive1 L2
ENSG00000180263 FGD6 953265 sc-eQTL 3.29e-01 -0.0837 0.0856 0.338 B_Naive1 L2
ENSG00000028203 VEZT 953001 sc-eQTL 4.52e-01 -0.0719 0.0954 0.339 B_Naive2 L2
ENSG00000059758 CDK17 -229733 sc-eQTL 6.08e-01 0.0375 0.0731 0.339 B_Naive2 L2
ENSG00000111142 METAP2 697227 sc-eQTL 9.23e-01 -0.00857 0.0882 0.339 B_Naive2 L2
ENSG00000111144 LTA4H 127227 sc-eQTL 9.07e-01 0.0081 0.0693 0.339 B_Naive2 L2
ENSG00000111145 ELK3 -23628 sc-eQTL 4.31e-01 -0.0644 0.0816 0.339 B_Naive2 L2
ENSG00000136014 USP44 619271 sc-eQTL 5.69e-01 -0.0503 0.0882 0.339 B_Naive2 L2
ENSG00000139343 SNRPF 311819 sc-eQTL 5.39e-01 -0.0499 0.081 0.339 B_Naive2 L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 5.12e-01 -0.0633 0.0963 0.339 B_Naive2 L2
ENSG00000180263 FGD6 953265 sc-eQTL 1.43e-03 0.228 0.0705 0.339 B_Naive2 L2
ENSG00000028203 VEZT 953001 sc-eQTL 1.53e-01 -0.135 0.0942 0.332 CD4_CTL L2
ENSG00000059758 CDK17 -229733 sc-eQTL 7.09e-01 -0.0258 0.0691 0.332 CD4_CTL L2
ENSG00000111142 METAP2 697227 sc-eQTL 8.15e-01 0.0231 0.099 0.332 CD4_CTL L2
ENSG00000111144 LTA4H 127227 sc-eQTL 4.27e-03 0.276 0.0955 0.332 CD4_CTL L2
ENSG00000111145 ELK3 -23628 sc-eQTL 5.82e-01 -0.0544 0.0987 0.332 CD4_CTL L2
ENSG00000136014 USP44 619271 sc-eQTL 9.46e-01 0.00538 0.0788 0.332 CD4_CTL L2
ENSG00000139343 SNRPF 311819 sc-eQTL 8.91e-01 0.0118 0.0858 0.332 CD4_CTL L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 6.61e-02 -0.182 0.0984 0.332 CD4_CTL L2
ENSG00000028203 VEZT 953001 sc-eQTL 5.58e-01 -0.0412 0.0704 0.338 CD4_Naive L2
ENSG00000059758 CDK17 -229733 sc-eQTL 7.28e-01 -0.0147 0.0423 0.338 CD4_Naive L2
ENSG00000111142 METAP2 697227 sc-eQTL 9.15e-01 -0.00649 0.061 0.338 CD4_Naive L2
ENSG00000111144 LTA4H 127227 sc-eQTL 1.60e-02 0.146 0.0603 0.338 CD4_Naive L2
ENSG00000111145 ELK3 -23628 sc-eQTL 1.99e-01 -0.0784 0.0609 0.338 CD4_Naive L2
ENSG00000136014 USP44 619271 sc-eQTL 5.57e-02 0.164 0.085 0.338 CD4_Naive L2
ENSG00000139343 SNRPF 311819 sc-eQTL 7.80e-01 -0.0152 0.0543 0.338 CD4_Naive L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 9.85e-01 -0.00126 0.0669 0.338 CD4_Naive L2
ENSG00000028203 VEZT 953001 sc-eQTL 5.63e-01 -0.0435 0.0751 0.338 CD4_TCM L2
ENSG00000059758 CDK17 -229733 sc-eQTL 8.55e-01 -0.00758 0.0413 0.338 CD4_TCM L2
ENSG00000111142 METAP2 697227 sc-eQTL 8.43e-01 -0.0139 0.0704 0.338 CD4_TCM L2
ENSG00000111144 LTA4H 127227 sc-eQTL 4.00e-01 0.0591 0.07 0.338 CD4_TCM L2
ENSG00000111145 ELK3 -23628 sc-eQTL 2.13e-02 0.158 0.0682 0.338 CD4_TCM L2
ENSG00000136014 USP44 619271 sc-eQTL 7.35e-01 0.0324 0.0954 0.338 CD4_TCM L2
ENSG00000139343 SNRPF 311819 sc-eQTL 5.14e-01 0.037 0.0566 0.338 CD4_TCM L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 9.10e-01 -0.00875 0.0773 0.338 CD4_TCM L2
ENSG00000028203 VEZT 953001 sc-eQTL 7.09e-01 -0.0361 0.0967 0.338 CD4_TEM L2
ENSG00000059758 CDK17 -229733 sc-eQTL 2.02e-02 0.118 0.0506 0.338 CD4_TEM L2
ENSG00000111142 METAP2 697227 sc-eQTL 8.60e-01 -0.0152 0.0857 0.338 CD4_TEM L2
ENSG00000111144 LTA4H 127227 sc-eQTL 3.89e-01 -0.0683 0.0791 0.338 CD4_TEM L2
ENSG00000111145 ELK3 -23628 sc-eQTL 9.38e-01 0.00577 0.0736 0.338 CD4_TEM L2
ENSG00000136014 USP44 619271 sc-eQTL 7.84e-01 0.0248 0.0905 0.338 CD4_TEM L2
ENSG00000139343 SNRPF 311819 sc-eQTL 4.34e-01 -0.0604 0.0769 0.338 CD4_TEM L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 6.34e-02 -0.169 0.0906 0.338 CD4_TEM L2
ENSG00000028203 VEZT 953001 sc-eQTL 1.84e-01 -0.113 0.0846 0.338 CD8_CTL L2
ENSG00000059758 CDK17 -229733 sc-eQTL 3.71e-01 -0.044 0.0491 0.338 CD8_CTL L2
ENSG00000111142 METAP2 697227 sc-eQTL 5.64e-01 -0.0491 0.0849 0.338 CD8_CTL L2
ENSG00000111144 LTA4H 127227 sc-eQTL 1.18e-01 0.138 0.0883 0.338 CD8_CTL L2
ENSG00000111145 ELK3 -23628 sc-eQTL 6.42e-01 -0.0376 0.0808 0.338 CD8_CTL L2
ENSG00000136014 USP44 619271 sc-eQTL 8.74e-01 -0.0142 0.0901 0.338 CD8_CTL L2
ENSG00000139343 SNRPF 311819 sc-eQTL 2.45e-01 -0.0864 0.0741 0.338 CD8_CTL L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 7.23e-01 0.0296 0.0833 0.338 CD8_CTL L2
ENSG00000028203 VEZT 953001 sc-eQTL 3.85e-02 0.18 0.0862 0.338 CD8_Naive L2
ENSG00000059758 CDK17 -229733 sc-eQTL 5.17e-01 -0.0385 0.0593 0.338 CD8_Naive L2
ENSG00000111142 METAP2 697227 sc-eQTL 8.93e-01 0.0106 0.0788 0.338 CD8_Naive L2
ENSG00000111144 LTA4H 127227 sc-eQTL 8.28e-01 0.0154 0.0711 0.338 CD8_Naive L2
ENSG00000111145 ELK3 -23628 sc-eQTL 3.76e-01 -0.0665 0.075 0.338 CD8_Naive L2
ENSG00000136014 USP44 619271 sc-eQTL 3.79e-01 0.0696 0.0788 0.338 CD8_Naive L2
ENSG00000139343 SNRPF 311819 sc-eQTL 8.54e-01 -0.0125 0.0676 0.338 CD8_Naive L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 8.48e-01 -0.0155 0.0805 0.338 CD8_Naive L2
ENSG00000028203 VEZT 953001 sc-eQTL 2.56e-01 -0.112 0.0979 0.338 CD8_TCM L2
ENSG00000059758 CDK17 -229733 sc-eQTL 7.53e-01 0.021 0.0667 0.338 CD8_TCM L2
ENSG00000111142 METAP2 697227 sc-eQTL 6.69e-01 0.0426 0.0995 0.338 CD8_TCM L2
ENSG00000111144 LTA4H 127227 sc-eQTL 6.37e-01 0.0463 0.098 0.338 CD8_TCM L2
ENSG00000111145 ELK3 -23628 sc-eQTL 1.35e-01 -0.124 0.0826 0.338 CD8_TCM L2
ENSG00000136014 USP44 619271 sc-eQTL 3.52e-01 0.0837 0.0897 0.338 CD8_TCM L2
ENSG00000139343 SNRPF 311819 sc-eQTL 8.28e-01 0.0208 0.0956 0.338 CD8_TCM L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 6.89e-01 0.0375 0.0936 0.338 CD8_TCM L2
ENSG00000028203 VEZT 953001 sc-eQTL 8.48e-01 0.019 0.0989 0.322 CD8_TEM L2
ENSG00000059758 CDK17 -229733 sc-eQTL 8.71e-01 0.0133 0.0818 0.322 CD8_TEM L2
ENSG00000111142 METAP2 697227 sc-eQTL 4.59e-02 0.191 0.095 0.322 CD8_TEM L2
ENSG00000111144 LTA4H 127227 sc-eQTL 8.80e-01 -0.0151 0.1 0.322 CD8_TEM L2
ENSG00000111145 ELK3 -23628 sc-eQTL 8.20e-01 0.0225 0.0984 0.322 CD8_TEM L2
ENSG00000136014 USP44 619271 sc-eQTL 6.95e-01 -0.0328 0.0838 0.322 CD8_TEM L2
ENSG00000139343 SNRPF 311819 sc-eQTL 7.21e-01 0.0327 0.0915 0.322 CD8_TEM L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 7.04e-01 0.0378 0.0993 0.322 CD8_TEM L2
ENSG00000028203 VEZT 953001 sc-eQTL 9.36e-01 -0.00767 0.0947 0.333 MAIT L2
ENSG00000059758 CDK17 -229733 sc-eQTL 3.66e-01 0.0491 0.0542 0.333 MAIT L2
ENSG00000074527 NTN4 379595 sc-eQTL 4.39e-01 -0.0566 0.0731 0.333 MAIT L2
ENSG00000111142 METAP2 697227 sc-eQTL 8.74e-01 0.0146 0.0921 0.333 MAIT L2
ENSG00000111144 LTA4H 127227 sc-eQTL 7.81e-01 -0.0234 0.0838 0.333 MAIT L2
ENSG00000111145 ELK3 -23628 sc-eQTL 9.39e-01 -0.0054 0.0704 0.333 MAIT L2
ENSG00000139343 SNRPF 311819 sc-eQTL 7.30e-01 -0.0282 0.0815 0.333 MAIT L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 1.58e-01 0.129 0.0911 0.333 MAIT L2
ENSG00000188596 CFAP54 -318824 sc-eQTL 6.27e-01 0.0441 0.0907 0.333 MAIT L2
ENSG00000028203 VEZT 953001 sc-eQTL 3.02e-01 0.0975 0.0942 0.333 NK_CD56bright L2
ENSG00000059758 CDK17 -229733 sc-eQTL 4.88e-01 0.0382 0.055 0.333 NK_CD56bright L2
ENSG00000111142 METAP2 697227 sc-eQTL 5.58e-01 0.0544 0.0928 0.333 NK_CD56bright L2
ENSG00000111144 LTA4H 127227 sc-eQTL 3.32e-01 0.0789 0.0812 0.333 NK_CD56bright L2
ENSG00000111145 ELK3 -23628 sc-eQTL 2.04e-01 -0.11 0.086 0.333 NK_CD56bright L2
ENSG00000139343 SNRPF 311819 sc-eQTL 1.40e-02 -0.221 0.089 0.333 NK_CD56bright L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 3.67e-02 -0.19 0.0902 0.333 NK_CD56bright L2
ENSG00000028203 VEZT 953001 sc-eQTL 8.14e-01 -0.0217 0.092 0.336 NK_CD56dim L2
ENSG00000059758 CDK17 -229733 sc-eQTL 5.34e-02 -0.0912 0.047 0.336 NK_CD56dim L2
ENSG00000111142 METAP2 697227 sc-eQTL 8.07e-01 0.0203 0.083 0.336 NK_CD56dim L2
ENSG00000111144 LTA4H 127227 sc-eQTL 4.02e-01 0.0719 0.0855 0.336 NK_CD56dim L2
ENSG00000111145 ELK3 -23628 sc-eQTL 7.11e-01 -0.0281 0.0758 0.336 NK_CD56dim L2
ENSG00000139343 SNRPF 311819 sc-eQTL 8.98e-01 -0.00923 0.0721 0.336 NK_CD56dim L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 9.91e-01 0.000892 0.0831 0.336 NK_CD56dim L2
ENSG00000028203 VEZT 953001 sc-eQTL 1.88e-01 0.131 0.099 0.338 NK_HLA L2
ENSG00000059758 CDK17 -229733 sc-eQTL 7.92e-01 -0.0194 0.0736 0.338 NK_HLA L2
ENSG00000111142 METAP2 697227 sc-eQTL 6.06e-01 -0.0478 0.0926 0.338 NK_HLA L2
ENSG00000111144 LTA4H 127227 sc-eQTL 1.40e-01 0.142 0.0959 0.338 NK_HLA L2
ENSG00000111145 ELK3 -23628 sc-eQTL 5.30e-01 -0.0563 0.0894 0.338 NK_HLA L2
ENSG00000139343 SNRPF 311819 sc-eQTL 5.88e-01 -0.0506 0.0932 0.338 NK_HLA L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 8.16e-01 -0.0205 0.0882 0.338 NK_HLA L2
ENSG00000028203 VEZT 953001 sc-eQTL 6.62e-01 0.0369 0.0842 0.336 NK_cytokine L2
ENSG00000059758 CDK17 -229733 sc-eQTL 4.79e-02 -0.102 0.051 0.336 NK_cytokine L2
ENSG00000111142 METAP2 697227 sc-eQTL 2.40e-01 -0.101 0.0853 0.336 NK_cytokine L2
ENSG00000111144 LTA4H 127227 sc-eQTL 2.21e-01 0.107 0.0868 0.336 NK_cytokine L2
ENSG00000111145 ELK3 -23628 sc-eQTL 8.71e-01 0.0135 0.0834 0.336 NK_cytokine L2
ENSG00000139343 SNRPF 311819 sc-eQTL 4.65e-01 -0.0517 0.0706 0.336 NK_cytokine L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 6.64e-01 -0.038 0.0873 0.336 NK_cytokine L2
ENSG00000028203 VEZT 953001 sc-eQTL 9.20e-01 0.012 0.12 0.341 PB L2
ENSG00000059758 CDK17 -229733 sc-eQTL 3.12e-01 -0.103 0.102 0.341 PB L2
ENSG00000111142 METAP2 697227 sc-eQTL 1.58e-01 -0.168 0.118 0.341 PB L2
ENSG00000111144 LTA4H 127227 sc-eQTL 6.27e-03 0.243 0.0871 0.341 PB L2
ENSG00000111145 ELK3 -23628 sc-eQTL 9.90e-02 -0.19 0.114 0.341 PB L2
ENSG00000136014 USP44 619271 sc-eQTL 3.44e-01 0.101 0.106 0.341 PB L2
ENSG00000139343 SNRPF 311819 sc-eQTL 7.98e-01 0.029 0.113 0.341 PB L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 6.81e-02 0.243 0.132 0.341 PB L2
ENSG00000180263 FGD6 953265 sc-eQTL 6.90e-02 -0.173 0.0941 0.341 PB L2
ENSG00000028203 VEZT 953001 sc-eQTL 3.64e-01 -0.0812 0.0892 0.339 Pro_T L2
ENSG00000059758 CDK17 -229733 sc-eQTL 2.71e-01 0.0637 0.0577 0.339 Pro_T L2
ENSG00000074527 NTN4 379595 sc-eQTL 2.16e-01 -0.0803 0.0647 0.339 Pro_T L2
ENSG00000111142 METAP2 697227 sc-eQTL 9.24e-01 0.00736 0.0767 0.339 Pro_T L2
ENSG00000111144 LTA4H 127227 sc-eQTL 4.16e-01 0.0622 0.0763 0.339 Pro_T L2
ENSG00000111145 ELK3 -23628 sc-eQTL 7.50e-01 -0.0295 0.0924 0.339 Pro_T L2
ENSG00000139343 SNRPF 311819 sc-eQTL 1.61e-01 0.0817 0.058 0.339 Pro_T L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 9.63e-01 -0.0039 0.0847 0.339 Pro_T L2
ENSG00000188596 CFAP54 -318824 sc-eQTL 8.11e-01 0.0164 0.0685 0.339 Pro_T L2
ENSG00000028203 VEZT 953001 sc-eQTL 5.17e-01 0.0595 0.0917 0.338 Treg L2
ENSG00000059758 CDK17 -229733 sc-eQTL 8.40e-02 0.11 0.0632 0.338 Treg L2
ENSG00000111142 METAP2 697227 sc-eQTL 4.20e-01 -0.0699 0.0865 0.338 Treg L2
ENSG00000111144 LTA4H 127227 sc-eQTL 1.38e-01 0.119 0.0803 0.338 Treg L2
ENSG00000111145 ELK3 -23628 sc-eQTL 5.42e-01 -0.0446 0.073 0.338 Treg L2
ENSG00000136014 USP44 619271 sc-eQTL 6.15e-01 -0.0413 0.082 0.338 Treg L2
ENSG00000139343 SNRPF 311819 sc-eQTL 8.41e-01 -0.017 0.0846 0.338 Treg L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 4.83e-01 0.0663 0.0943 0.338 Treg L2
ENSG00000028203 VEZT 953001 sc-eQTL 2.17e-01 0.111 0.0892 0.349 cDC L2
ENSG00000059758 CDK17 -229733 sc-eQTL 1.61e-02 -0.187 0.077 0.349 cDC L2
ENSG00000084110 HAL 174382 sc-eQTL 2.00e-02 0.188 0.0801 0.349 cDC L2
ENSG00000111142 METAP2 697227 sc-eQTL 4.95e-01 -0.067 0.098 0.349 cDC L2
ENSG00000111144 LTA4H 127227 sc-eQTL 8.18e-01 -0.0161 0.0697 0.349 cDC L2
ENSG00000111145 ELK3 -23628 sc-eQTL 2.92e-01 0.0969 0.0917 0.349 cDC L2
ENSG00000139343 SNRPF 311819 sc-eQTL 7.95e-01 -0.02 0.077 0.349 cDC L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 2.41e-01 0.11 0.0935 0.349 cDC L2
ENSG00000180263 FGD6 953265 sc-eQTL 2.32e-01 0.109 0.0905 0.349 cDC L2
ENSG00000257715 AC007298.1 145424 sc-eQTL 5.80e-01 0.0438 0.079 0.349 cDC L2
ENSG00000028203 VEZT 953001 sc-eQTL 2.37e-01 -0.106 0.0894 0.338 cMono_IL1B L2
ENSG00000059758 CDK17 -229733 sc-eQTL 9.93e-01 0.000632 0.0685 0.338 cMono_IL1B L2
ENSG00000084110 HAL 174382 sc-eQTL 2.92e-01 -0.0787 0.0745 0.338 cMono_IL1B L2
ENSG00000111142 METAP2 697227 sc-eQTL 2.05e-01 -0.0982 0.0771 0.338 cMono_IL1B L2
ENSG00000111144 LTA4H 127227 sc-eQTL 1.75e-01 0.109 0.0803 0.338 cMono_IL1B L2
ENSG00000111145 ELK3 -23628 sc-eQTL 6.20e-01 0.0309 0.0621 0.338 cMono_IL1B L2
ENSG00000139343 SNRPF 311819 sc-eQTL 4.59e-01 0.0475 0.064 0.338 cMono_IL1B L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 9.65e-01 0.00384 0.0883 0.338 cMono_IL1B L2
ENSG00000180263 FGD6 953265 sc-eQTL 9.96e-01 0.000367 0.0723 0.338 cMono_IL1B L2
ENSG00000257715 AC007298.1 145424 sc-eQTL 6.56e-01 0.0367 0.0823 0.338 cMono_IL1B L2
ENSG00000028203 VEZT 953001 sc-eQTL 2.39e-02 -0.206 0.0903 0.338 cMono_S100A L2
ENSG00000059758 CDK17 -229733 sc-eQTL 7.15e-01 0.0284 0.0778 0.338 cMono_S100A L2
ENSG00000084110 HAL 174382 sc-eQTL 4.68e-01 -0.0634 0.0872 0.338 cMono_S100A L2
ENSG00000111142 METAP2 697227 sc-eQTL 3.35e-01 -0.0852 0.0882 0.338 cMono_S100A L2
ENSG00000111144 LTA4H 127227 sc-eQTL 3.62e-01 0.0796 0.0871 0.338 cMono_S100A L2
ENSG00000111145 ELK3 -23628 sc-eQTL 6.45e-01 0.0328 0.071 0.338 cMono_S100A L2
ENSG00000139343 SNRPF 311819 sc-eQTL 3.25e-01 0.0692 0.0701 0.338 cMono_S100A L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 5.90e-01 -0.0511 0.0947 0.338 cMono_S100A L2
ENSG00000180263 FGD6 953265 sc-eQTL 8.46e-01 0.0164 0.0845 0.338 cMono_S100A L2
ENSG00000257715 AC007298.1 145424 sc-eQTL 5.70e-01 0.0508 0.0892 0.338 cMono_S100A L2
ENSG00000028203 VEZT 953001 sc-eQTL 5.73e-01 0.0675 0.12 0.333 gdT L2
ENSG00000059758 CDK17 -229733 sc-eQTL 6.86e-02 -0.144 0.0783 0.333 gdT L2
ENSG00000074527 NTN4 379595 sc-eQTL 5.06e-01 -0.0605 0.0908 0.333 gdT L2
ENSG00000111142 METAP2 697227 sc-eQTL 4.52e-01 0.0856 0.114 0.333 gdT L2
ENSG00000111144 LTA4H 127227 sc-eQTL 3.67e-01 0.107 0.118 0.333 gdT L2
ENSG00000111145 ELK3 -23628 sc-eQTL 7.25e-01 0.0387 0.11 0.333 gdT L2
ENSG00000139343 SNRPF 311819 sc-eQTL 5.50e-01 0.0634 0.106 0.333 gdT L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 8.85e-01 -0.0169 0.117 0.333 gdT L2
ENSG00000188596 CFAP54 -318824 sc-eQTL 5.73e-01 -0.0579 0.102 0.333 gdT L2
ENSG00000028203 VEZT 953001 sc-eQTL 3.37e-01 0.0963 0.1 0.331 intMono L2
ENSG00000059758 CDK17 -229733 sc-eQTL 4.13e-03 -0.254 0.0874 0.331 intMono L2
ENSG00000084110 HAL 174382 sc-eQTL 7.18e-01 -0.0326 0.0902 0.331 intMono L2
ENSG00000111142 METAP2 697227 sc-eQTL 7.30e-01 -0.0353 0.102 0.331 intMono L2
ENSG00000111144 LTA4H 127227 sc-eQTL 5.56e-01 0.0545 0.0925 0.331 intMono L2
ENSG00000111145 ELK3 -23628 sc-eQTL 3.50e-01 0.0771 0.0823 0.331 intMono L2
ENSG00000139343 SNRPF 311819 sc-eQTL 1.40e-01 0.13 0.0876 0.331 intMono L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 3.78e-01 0.0808 0.0914 0.331 intMono L2
ENSG00000180263 FGD6 953265 sc-eQTL 4.44e-01 -0.0679 0.0887 0.331 intMono L2
ENSG00000257715 AC007298.1 145424 sc-eQTL 3.19e-01 -0.0919 0.0919 0.331 intMono L2
ENSG00000028203 VEZT 953001 sc-eQTL 2.44e-01 -0.103 0.0884 0.337 ncMono L2
ENSG00000059758 CDK17 -229733 sc-eQTL 7.43e-02 -0.123 0.0685 0.337 ncMono L2
ENSG00000084110 HAL 174382 sc-eQTL 5.88e-01 -0.0418 0.077 0.337 ncMono L2
ENSG00000111142 METAP2 697227 sc-eQTL 7.47e-01 -0.0301 0.0932 0.337 ncMono L2
ENSG00000111144 LTA4H 127227 sc-eQTL 4.13e-01 0.0704 0.0858 0.337 ncMono L2
ENSG00000111145 ELK3 -23628 sc-eQTL 2.24e-01 -0.0897 0.0735 0.337 ncMono L2
ENSG00000139343 SNRPF 311819 sc-eQTL 5.96e-01 0.04 0.0753 0.337 ncMono L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 3.68e-01 -0.072 0.0799 0.337 ncMono L2
ENSG00000180263 FGD6 953265 sc-eQTL 9.99e-01 -0.000134 0.0876 0.337 ncMono L2
ENSG00000257715 AC007298.1 145424 sc-eQTL 5.76e-01 0.0511 0.0912 0.337 ncMono L2
ENSG00000028203 VEZT 953001 sc-eQTL 4.68e-01 -0.0734 0.101 0.347 pDC L2
ENSG00000059758 CDK17 -229733 sc-eQTL 6.37e-03 -0.244 0.0883 0.347 pDC L2
ENSG00000084110 HAL 174382 sc-eQTL 6.50e-01 0.0347 0.0763 0.347 pDC L2
ENSG00000111142 METAP2 697227 sc-eQTL 2.58e-01 -0.117 0.103 0.347 pDC L2
ENSG00000111144 LTA4H 127227 sc-eQTL 9.71e-01 -0.00313 0.0855 0.347 pDC L2
ENSG00000111145 ELK3 -23628 sc-eQTL 9.43e-01 0.00755 0.105 0.347 pDC L2
ENSG00000139343 SNRPF 311819 sc-eQTL 1.10e-01 0.145 0.0905 0.347 pDC L2
ENSG00000139350 NEDD1 -736476 sc-eQTL 7.83e-01 -0.0278 0.101 0.347 pDC L2
ENSG00000180263 FGD6 953265 sc-eQTL 7.91e-01 -0.0235 0.0886 0.347 pDC L2
ENSG00000257715 AC007298.1 145424 sc-eQTL 7.45e-01 -0.0281 0.0863 0.347 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 953001 sc-eQTL 5.13e-01 -0.0596 0.091 0.338 B_Memory LOneK1K
ENSG00000059758 CDK17 -229733 sc-eQTL 3.16e-01 0.0612 0.0609 0.338 B_Memory LOneK1K
ENSG00000111142 METAP2 697227 sc-eQTL 5.83e-02 -0.16 0.0841 0.338 B_Memory LOneK1K
ENSG00000111144 LTA4H 127227 sc-eQTL 9.16e-01 -0.00668 0.0634 0.338 B_Memory LOneK1K
ENSG00000111145 ELK3 -23628 sc-eQTL 6.75e-02 0.132 0.0718 0.338 B_Memory LOneK1K
ENSG00000136014 USP44 619271 sc-eQTL 5.74e-01 0.0508 0.0902 0.338 B_Memory LOneK1K
ENSG00000139343 SNRPF 311819 sc-eQTL 1.17e-01 -0.11 0.0698 0.338 B_Memory LOneK1K
ENSG00000139350 NEDD1 -736476 sc-eQTL 5.70e-01 0.0523 0.092 0.338 B_Memory LOneK1K
ENSG00000180263 FGD6 953265 sc-eQTL 8.76e-01 -0.0127 0.0808 0.338 B_Memory LOneK1K
ENSG00000028203 VEZT 953001 sc-eQTL 4.12e-01 -0.0689 0.0838 0.338 B_Naive LOneK1K
ENSG00000059758 CDK17 -229733 sc-eQTL 6.73e-01 0.0218 0.0517 0.338 B_Naive LOneK1K
ENSG00000111142 METAP2 697227 sc-eQTL 7.28e-01 -0.0244 0.07 0.338 B_Naive LOneK1K
ENSG00000111144 LTA4H 127227 sc-eQTL 9.64e-01 -0.00261 0.0581 0.338 B_Naive LOneK1K
ENSG00000111145 ELK3 -23628 sc-eQTL 4.60e-01 -0.0488 0.0661 0.338 B_Naive LOneK1K
ENSG00000136014 USP44 619271 sc-eQTL 7.74e-01 0.0233 0.0809 0.338 B_Naive LOneK1K
ENSG00000139343 SNRPF 311819 sc-eQTL 4.08e-01 -0.0551 0.0665 0.338 B_Naive LOneK1K
ENSG00000139350 NEDD1 -736476 sc-eQTL 3.53e-01 -0.0818 0.088 0.338 B_Naive LOneK1K
ENSG00000180263 FGD6 953265 sc-eQTL 5.38e-01 0.0547 0.0888 0.338 B_Naive LOneK1K
ENSG00000028203 VEZT 953001 sc-eQTL 2.64e-02 -0.181 0.0809 0.338 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -229733 sc-eQTL 6.42e-01 0.0286 0.0614 0.338 CD14_Mono LOneK1K
ENSG00000084110 HAL 174382 sc-eQTL 4.32e-01 -0.0585 0.0742 0.338 CD14_Mono LOneK1K
ENSG00000111142 METAP2 697227 sc-eQTL 5.29e-02 -0.135 0.0694 0.338 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 127227 sc-eQTL 3.51e-01 0.0762 0.0815 0.338 CD14_Mono LOneK1K
ENSG00000111145 ELK3 -23628 sc-eQTL 3.75e-01 0.0523 0.0589 0.338 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 311819 sc-eQTL 1.67e-01 0.0785 0.0567 0.338 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -736476 sc-eQTL 7.16e-01 -0.0325 0.0892 0.338 CD14_Mono LOneK1K
ENSG00000180263 FGD6 953265 sc-eQTL 7.06e-01 0.0267 0.0708 0.338 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 145424 sc-eQTL 4.43e-01 0.0634 0.0826 0.338 CD14_Mono LOneK1K
ENSG00000028203 VEZT 953001 sc-eQTL 5.24e-01 -0.0592 0.0927 0.336 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -229733 sc-eQTL 3.39e-02 -0.134 0.0627 0.336 CD16_Mono LOneK1K
ENSG00000084110 HAL 174382 sc-eQTL 6.37e-01 -0.0354 0.0749 0.336 CD16_Mono LOneK1K
ENSG00000111142 METAP2 697227 sc-eQTL 5.75e-01 -0.0477 0.085 0.336 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 127227 sc-eQTL 3.10e-01 0.0844 0.0829 0.336 CD16_Mono LOneK1K
ENSG00000111145 ELK3 -23628 sc-eQTL 7.15e-01 0.0225 0.0615 0.336 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 311819 sc-eQTL 3.51e-01 0.0591 0.0633 0.336 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -736476 sc-eQTL 8.15e-01 0.0191 0.0813 0.336 CD16_Mono LOneK1K
ENSG00000180263 FGD6 953265 sc-eQTL 5.83e-01 -0.0428 0.0779 0.336 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 145424 sc-eQTL 6.84e-01 0.0351 0.086 0.336 CD16_Mono LOneK1K
ENSG00000028203 VEZT 953001 sc-eQTL 5.87e-01 0.0458 0.0842 0.336 NK_CD56dim LOneK1K
ENSG00000059758 CDK17 -229733 sc-eQTL 1.24e-02 -0.11 0.0436 0.336 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 697227 sc-eQTL 2.72e-01 -0.0739 0.0671 0.336 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 127227 sc-eQTL 2.31e-01 0.0921 0.0767 0.336 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 -23628 sc-eQTL 4.33e-01 -0.0552 0.0703 0.336 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 311819 sc-eQTL 3.50e-01 -0.0563 0.0601 0.336 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -736476 sc-eQTL 9.28e-01 0.00684 0.0751 0.336 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111145 ELK3 -23628 eQTL 8.77e-05 0.0679 0.0172 0.0 0.0 0.353
ENSG00000139350 NEDD1 -736476 eQTL 0.0329 -0.0514 0.0241 0.0 0.0 0.353

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina