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Genes within 1Mb (chr12:96137851:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 920105 sc-eQTL 8.26e-02 -0.124 0.0712 0.579 B L1
ENSG00000059758 CDK17 -262629 sc-eQTL 8.91e-01 0.00611 0.0446 0.579 B L1
ENSG00000111142 METAP2 664331 sc-eQTL 6.07e-01 -0.0325 0.0631 0.579 B L1
ENSG00000111144 LTA4H 94331 sc-eQTL 2.03e-01 -0.0705 0.0552 0.579 B L1
ENSG00000111145 ELK3 -56524 sc-eQTL 5.34e-03 -0.163 0.0579 0.579 B L1
ENSG00000136014 USP44 586375 sc-eQTL 2.36e-01 0.0861 0.0725 0.579 B L1
ENSG00000139343 SNRPF 278923 sc-eQTL 6.45e-01 -0.0247 0.0535 0.579 B L1
ENSG00000139350 NEDD1 -769372 sc-eQTL 1.79e-01 -0.105 0.0779 0.579 B L1
ENSG00000180263 FGD6 920369 sc-eQTL 6.34e-01 0.0347 0.0729 0.579 B L1
ENSG00000028203 VEZT 920105 sc-eQTL 3.05e-01 -0.0614 0.0597 0.579 CD4T L1
ENSG00000059758 CDK17 -262629 sc-eQTL 3.05e-01 -0.0381 0.0371 0.579 CD4T L1
ENSG00000111142 METAP2 664331 sc-eQTL 3.53e-01 -0.0482 0.0518 0.579 CD4T L1
ENSG00000111144 LTA4H 94331 sc-eQTL 8.81e-01 -0.00766 0.0511 0.579 CD4T L1
ENSG00000111145 ELK3 -56524 sc-eQTL 9.52e-01 -0.00332 0.0554 0.579 CD4T L1
ENSG00000136014 USP44 586375 sc-eQTL 6.81e-02 -0.144 0.0783 0.579 CD4T L1
ENSG00000139343 SNRPF 278923 sc-eQTL 2.58e-01 -0.0547 0.0482 0.579 CD4T L1
ENSG00000139350 NEDD1 -769372 sc-eQTL 5.62e-01 0.0346 0.0595 0.579 CD4T L1
ENSG00000028203 VEZT 920105 sc-eQTL 3.17e-01 -0.0716 0.0713 0.579 CD8T L1
ENSG00000059758 CDK17 -262629 sc-eQTL 7.67e-01 -0.0113 0.0379 0.579 CD8T L1
ENSG00000111142 METAP2 664331 sc-eQTL 6.43e-01 -0.0283 0.0612 0.579 CD8T L1
ENSG00000111144 LTA4H 94331 sc-eQTL 4.50e-02 -0.0813 0.0403 0.579 CD8T L1
ENSG00000111145 ELK3 -56524 sc-eQTL 5.30e-01 -0.0385 0.0612 0.579 CD8T L1
ENSG00000136014 USP44 586375 sc-eQTL 7.12e-02 -0.125 0.0691 0.579 CD8T L1
ENSG00000139343 SNRPF 278923 sc-eQTL 1.94e-01 0.0651 0.05 0.579 CD8T L1
ENSG00000139350 NEDD1 -769372 sc-eQTL 5.19e-01 -0.0431 0.0667 0.579 CD8T L1
ENSG00000028203 VEZT 920105 sc-eQTL 7.05e-01 -0.0313 0.0825 0.588 DC L1
ENSG00000059758 CDK17 -262629 sc-eQTL 1.59e-01 -0.0971 0.0687 0.588 DC L1
ENSG00000084110 HAL 141486 sc-eQTL 5.94e-01 0.042 0.0785 0.588 DC L1
ENSG00000111142 METAP2 664331 sc-eQTL 6.90e-01 -0.0345 0.0866 0.588 DC L1
ENSG00000111144 LTA4H 94331 sc-eQTL 7.33e-01 -0.022 0.0643 0.588 DC L1
ENSG00000111145 ELK3 -56524 sc-eQTL 8.07e-01 -0.0193 0.0787 0.588 DC L1
ENSG00000139343 SNRPF 278923 sc-eQTL 5.73e-01 0.0369 0.0654 0.588 DC L1
ENSG00000139350 NEDD1 -769372 sc-eQTL 8.66e-01 0.0142 0.084 0.588 DC L1
ENSG00000180263 FGD6 920369 sc-eQTL 3.35e-01 0.0749 0.0774 0.588 DC L1
ENSG00000257715 AC007298.1 112528 sc-eQTL 6.34e-01 -0.0361 0.0758 0.588 DC L1
ENSG00000028203 VEZT 920105 sc-eQTL 9.50e-01 0.00491 0.0782 0.579 Mono L1
ENSG00000059758 CDK17 -262629 sc-eQTL 1.28e-02 -0.142 0.0564 0.579 Mono L1
ENSG00000084110 HAL 141486 sc-eQTL 3.85e-01 -0.0626 0.072 0.579 Mono L1
ENSG00000111142 METAP2 664331 sc-eQTL 7.77e-01 0.0177 0.0623 0.579 Mono L1
ENSG00000111144 LTA4H 94331 sc-eQTL 3.96e-02 -0.167 0.0806 0.579 Mono L1
ENSG00000111145 ELK3 -56524 sc-eQTL 1.32e-01 -0.0821 0.0544 0.579 Mono L1
ENSG00000139343 SNRPF 278923 sc-eQTL 4.99e-01 -0.0348 0.0515 0.579 Mono L1
ENSG00000139350 NEDD1 -769372 sc-eQTL 4.62e-02 -0.157 0.0784 0.579 Mono L1
ENSG00000180263 FGD6 920369 sc-eQTL 1.48e-01 -0.0958 0.066 0.579 Mono L1
ENSG00000257715 AC007298.1 112528 sc-eQTL 5.31e-01 -0.0481 0.0766 0.579 Mono L1
ENSG00000028203 VEZT 920105 sc-eQTL 6.93e-02 -0.14 0.0768 0.579 NK L1
ENSG00000059758 CDK17 -262629 sc-eQTL 6.38e-01 0.0195 0.0414 0.579 NK L1
ENSG00000111142 METAP2 664331 sc-eQTL 9.11e-01 0.00687 0.0613 0.579 NK L1
ENSG00000111144 LTA4H 94331 sc-eQTL 5.30e-01 -0.0442 0.0702 0.579 NK L1
ENSG00000111145 ELK3 -56524 sc-eQTL 9.27e-01 0.0061 0.0667 0.579 NK L1
ENSG00000139343 SNRPF 278923 sc-eQTL 7.42e-01 -0.0182 0.0553 0.579 NK L1
ENSG00000139350 NEDD1 -769372 sc-eQTL 8.18e-01 -0.0161 0.07 0.579 NK L1
ENSG00000028203 VEZT 920105 sc-eQTL 8.47e-01 -0.0168 0.0869 0.579 Other_T L1
ENSG00000059758 CDK17 -262629 sc-eQTL 2.61e-03 0.106 0.0346 0.579 Other_T L1
ENSG00000074527 NTN4 346699 sc-eQTL 4.24e-01 0.0523 0.0654 0.579 Other_T L1
ENSG00000111142 METAP2 664331 sc-eQTL 4.67e-01 0.0491 0.0675 0.579 Other_T L1
ENSG00000111144 LTA4H 94331 sc-eQTL 2.95e-01 -0.0774 0.0738 0.579 Other_T L1
ENSG00000111145 ELK3 -56524 sc-eQTL 3.18e-05 -0.236 0.0554 0.579 Other_T L1
ENSG00000139343 SNRPF 278923 sc-eQTL 3.76e-01 -0.0475 0.0536 0.579 Other_T L1
ENSG00000139350 NEDD1 -769372 sc-eQTL 5.08e-01 -0.0541 0.0816 0.579 Other_T L1
ENSG00000188596 CFAP54 -351720 sc-eQTL 3.44e-01 0.08 0.0844 0.579 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 920105 sc-eQTL 3.31e-01 -0.0939 0.0964 0.566 B_Activated L2
ENSG00000059758 CDK17 -262629 sc-eQTL 1.09e-01 0.128 0.0795 0.566 B_Activated L2
ENSG00000111142 METAP2 664331 sc-eQTL 8.30e-02 0.174 0.0999 0.566 B_Activated L2
ENSG00000111144 LTA4H 94331 sc-eQTL 4.73e-01 -0.065 0.0905 0.566 B_Activated L2
ENSG00000111145 ELK3 -56524 sc-eQTL 9.27e-01 -0.0088 0.096 0.566 B_Activated L2
ENSG00000136014 USP44 586375 sc-eQTL 9.82e-01 0.00165 0.0737 0.566 B_Activated L2
ENSG00000139343 SNRPF 278923 sc-eQTL 5.48e-01 0.0544 0.0904 0.566 B_Activated L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 5.74e-01 -0.0533 0.0946 0.566 B_Activated L2
ENSG00000180263 FGD6 920369 sc-eQTL 1.52e-01 0.0976 0.0679 0.566 B_Activated L2
ENSG00000028203 VEZT 920105 sc-eQTL 9.68e-01 0.0035 0.0862 0.577 B_Intermediate L2
ENSG00000059758 CDK17 -262629 sc-eQTL 5.25e-01 0.0441 0.0693 0.577 B_Intermediate L2
ENSG00000111142 METAP2 664331 sc-eQTL 7.70e-01 0.0233 0.0795 0.577 B_Intermediate L2
ENSG00000111144 LTA4H 94331 sc-eQTL 2.85e-01 -0.0718 0.067 0.577 B_Intermediate L2
ENSG00000111145 ELK3 -56524 sc-eQTL 6.12e-03 -0.206 0.0744 0.577 B_Intermediate L2
ENSG00000136014 USP44 586375 sc-eQTL 4.92e-01 -0.0614 0.0892 0.577 B_Intermediate L2
ENSG00000139343 SNRPF 278923 sc-eQTL 8.72e-01 0.0121 0.0755 0.577 B_Intermediate L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 5.80e-01 -0.049 0.0883 0.577 B_Intermediate L2
ENSG00000180263 FGD6 920369 sc-eQTL 2.32e-01 -0.0954 0.0796 0.577 B_Intermediate L2
ENSG00000028203 VEZT 920105 sc-eQTL 1.61e-01 -0.126 0.0895 0.58 B_Memory L2
ENSG00000059758 CDK17 -262629 sc-eQTL 4.35e-01 -0.0524 0.067 0.58 B_Memory L2
ENSG00000111142 METAP2 664331 sc-eQTL 1.88e-02 -0.204 0.0861 0.58 B_Memory L2
ENSG00000111144 LTA4H 94331 sc-eQTL 8.07e-01 -0.019 0.0774 0.58 B_Memory L2
ENSG00000111145 ELK3 -56524 sc-eQTL 2.31e-01 -0.0911 0.0759 0.58 B_Memory L2
ENSG00000136014 USP44 586375 sc-eQTL 5.34e-01 -0.052 0.0835 0.58 B_Memory L2
ENSG00000139343 SNRPF 278923 sc-eQTL 4.10e-01 -0.0666 0.0806 0.58 B_Memory L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 9.09e-01 -0.0102 0.0893 0.58 B_Memory L2
ENSG00000180263 FGD6 920369 sc-eQTL 4.51e-01 -0.0626 0.083 0.58 B_Memory L2
ENSG00000028203 VEZT 920105 sc-eQTL 1.50e-01 -0.121 0.0834 0.579 B_Naive1 L2
ENSG00000059758 CDK17 -262629 sc-eQTL 7.48e-01 -0.0177 0.0551 0.579 B_Naive1 L2
ENSG00000111142 METAP2 664331 sc-eQTL 5.43e-01 0.0434 0.0712 0.579 B_Naive1 L2
ENSG00000111144 LTA4H 94331 sc-eQTL 3.08e-01 -0.0589 0.0576 0.579 B_Naive1 L2
ENSG00000111145 ELK3 -56524 sc-eQTL 4.07e-01 -0.0566 0.0681 0.579 B_Naive1 L2
ENSG00000136014 USP44 586375 sc-eQTL 7.74e-01 0.0246 0.0858 0.579 B_Naive1 L2
ENSG00000139343 SNRPF 278923 sc-eQTL 1.99e-01 0.0852 0.0661 0.579 B_Naive1 L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 7.44e-01 -0.0278 0.0851 0.579 B_Naive1 L2
ENSG00000180263 FGD6 920369 sc-eQTL 6.67e-01 0.0351 0.0815 0.579 B_Naive1 L2
ENSG00000028203 VEZT 920105 sc-eQTL 7.54e-01 -0.0289 0.0921 0.579 B_Naive2 L2
ENSG00000059758 CDK17 -262629 sc-eQTL 7.57e-01 -0.0219 0.0705 0.579 B_Naive2 L2
ENSG00000111142 METAP2 664331 sc-eQTL 8.33e-01 0.018 0.0851 0.579 B_Naive2 L2
ENSG00000111144 LTA4H 94331 sc-eQTL 7.84e-01 -0.0183 0.0668 0.579 B_Naive2 L2
ENSG00000111145 ELK3 -56524 sc-eQTL 5.22e-02 -0.152 0.0781 0.579 B_Naive2 L2
ENSG00000136014 USP44 586375 sc-eQTL 1.70e-01 0.117 0.0847 0.579 B_Naive2 L2
ENSG00000139343 SNRPF 278923 sc-eQTL 9.90e-01 -0.000998 0.0782 0.579 B_Naive2 L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 7.87e-01 -0.0252 0.093 0.579 B_Naive2 L2
ENSG00000180263 FGD6 920369 sc-eQTL 9.48e-02 0.116 0.0693 0.579 B_Naive2 L2
ENSG00000028203 VEZT 920105 sc-eQTL 5.14e-01 -0.0608 0.0931 0.58 CD4_CTL L2
ENSG00000059758 CDK17 -262629 sc-eQTL 4.20e-01 0.0549 0.0679 0.58 CD4_CTL L2
ENSG00000111142 METAP2 664331 sc-eQTL 2.26e-01 0.118 0.097 0.58 CD4_CTL L2
ENSG00000111144 LTA4H 94331 sc-eQTL 7.69e-01 -0.0282 0.0959 0.58 CD4_CTL L2
ENSG00000111145 ELK3 -56524 sc-eQTL 2.94e-01 -0.102 0.0969 0.58 CD4_CTL L2
ENSG00000136014 USP44 586375 sc-eQTL 3.01e-01 -0.0802 0.0773 0.58 CD4_CTL L2
ENSG00000139343 SNRPF 278923 sc-eQTL 2.50e-01 0.097 0.0842 0.58 CD4_CTL L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 9.35e-01 0.008 0.0976 0.58 CD4_CTL L2
ENSG00000028203 VEZT 920105 sc-eQTL 8.06e-01 -0.0169 0.0687 0.579 CD4_Naive L2
ENSG00000059758 CDK17 -262629 sc-eQTL 3.61e-01 -0.0377 0.0412 0.579 CD4_Naive L2
ENSG00000111142 METAP2 664331 sc-eQTL 2.37e-01 -0.0702 0.0593 0.579 CD4_Naive L2
ENSG00000111144 LTA4H 94331 sc-eQTL 8.64e-01 -0.0103 0.0596 0.579 CD4_Naive L2
ENSG00000111145 ELK3 -56524 sc-eQTL 6.61e-01 -0.0262 0.0596 0.579 CD4_Naive L2
ENSG00000136014 USP44 586375 sc-eQTL 1.34e-01 -0.125 0.0832 0.579 CD4_Naive L2
ENSG00000139343 SNRPF 278923 sc-eQTL 7.14e-01 -0.0195 0.053 0.579 CD4_Naive L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 6.96e-01 0.0255 0.0652 0.579 CD4_Naive L2
ENSG00000028203 VEZT 920105 sc-eQTL 6.00e-02 -0.135 0.0712 0.579 CD4_TCM L2
ENSG00000059758 CDK17 -262629 sc-eQTL 9.92e-01 -0.000389 0.0395 0.579 CD4_TCM L2
ENSG00000111142 METAP2 664331 sc-eQTL 3.98e-01 -0.0569 0.0671 0.579 CD4_TCM L2
ENSG00000111144 LTA4H 94331 sc-eQTL 4.60e-01 -0.0495 0.0669 0.579 CD4_TCM L2
ENSG00000111145 ELK3 -56524 sc-eQTL 1.65e-01 0.0914 0.0656 0.579 CD4_TCM L2
ENSG00000136014 USP44 586375 sc-eQTL 7.42e-01 -0.03 0.0911 0.579 CD4_TCM L2
ENSG00000139343 SNRPF 278923 sc-eQTL 3.76e-02 -0.112 0.0535 0.579 CD4_TCM L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 4.89e-01 0.0511 0.0738 0.579 CD4_TCM L2
ENSG00000028203 VEZT 920105 sc-eQTL 8.33e-01 -0.0194 0.092 0.579 CD4_TEM L2
ENSG00000059758 CDK17 -262629 sc-eQTL 9.93e-01 0.000422 0.0488 0.579 CD4_TEM L2
ENSG00000111142 METAP2 664331 sc-eQTL 6.74e-01 -0.0343 0.0815 0.579 CD4_TEM L2
ENSG00000111144 LTA4H 94331 sc-eQTL 1.14e-01 0.119 0.0749 0.579 CD4_TEM L2
ENSG00000111145 ELK3 -56524 sc-eQTL 9.53e-01 0.00411 0.07 0.579 CD4_TEM L2
ENSG00000136014 USP44 586375 sc-eQTL 3.60e-01 -0.0789 0.0859 0.579 CD4_TEM L2
ENSG00000139343 SNRPF 278923 sc-eQTL 9.76e-01 0.00224 0.0733 0.579 CD4_TEM L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 3.58e-01 -0.0799 0.0867 0.579 CD4_TEM L2
ENSG00000028203 VEZT 920105 sc-eQTL 4.61e-01 -0.0608 0.0824 0.579 CD8_CTL L2
ENSG00000059758 CDK17 -262629 sc-eQTL 4.68e-01 -0.0347 0.0477 0.579 CD8_CTL L2
ENSG00000111142 METAP2 664331 sc-eQTL 6.02e-01 0.0431 0.0825 0.579 CD8_CTL L2
ENSG00000111144 LTA4H 94331 sc-eQTL 8.39e-02 -0.149 0.0856 0.579 CD8_CTL L2
ENSG00000111145 ELK3 -56524 sc-eQTL 7.48e-01 0.0253 0.0785 0.579 CD8_CTL L2
ENSG00000136014 USP44 586375 sc-eQTL 1.70e-01 -0.12 0.0871 0.579 CD8_CTL L2
ENSG00000139343 SNRPF 278923 sc-eQTL 2.12e-01 0.0899 0.0719 0.579 CD8_CTL L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 6.20e-03 -0.22 0.0795 0.579 CD8_CTL L2
ENSG00000028203 VEZT 920105 sc-eQTL 9.56e-02 -0.138 0.0826 0.579 CD8_Naive L2
ENSG00000059758 CDK17 -262629 sc-eQTL 9.65e-01 0.00251 0.0566 0.579 CD8_Naive L2
ENSG00000111142 METAP2 664331 sc-eQTL 3.14e-01 -0.0758 0.0751 0.579 CD8_Naive L2
ENSG00000111144 LTA4H 94331 sc-eQTL 8.73e-01 0.0109 0.0678 0.579 CD8_Naive L2
ENSG00000111145 ELK3 -56524 sc-eQTL 2.94e-01 -0.0752 0.0716 0.579 CD8_Naive L2
ENSG00000136014 USP44 586375 sc-eQTL 6.76e-02 -0.137 0.0748 0.579 CD8_Naive L2
ENSG00000139343 SNRPF 278923 sc-eQTL 9.31e-01 0.00556 0.0645 0.579 CD8_Naive L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 2.01e-01 0.0982 0.0765 0.579 CD8_Naive L2
ENSG00000028203 VEZT 920105 sc-eQTL 7.97e-02 -0.159 0.0905 0.576 CD8_TCM L2
ENSG00000059758 CDK17 -262629 sc-eQTL 9.57e-01 0.00332 0.062 0.576 CD8_TCM L2
ENSG00000111142 METAP2 664331 sc-eQTL 7.57e-01 -0.0286 0.0925 0.576 CD8_TCM L2
ENSG00000111144 LTA4H 94331 sc-eQTL 3.37e-01 -0.0875 0.0909 0.576 CD8_TCM L2
ENSG00000111145 ELK3 -56524 sc-eQTL 4.01e-01 0.0649 0.077 0.576 CD8_TCM L2
ENSG00000136014 USP44 586375 sc-eQTL 8.18e-01 -0.0193 0.0835 0.576 CD8_TCM L2
ENSG00000139343 SNRPF 278923 sc-eQTL 4.18e-01 0.0719 0.0887 0.576 CD8_TCM L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 5.98e-02 -0.163 0.0862 0.576 CD8_TCM L2
ENSG00000028203 VEZT 920105 sc-eQTL 1.21e-01 0.143 0.092 0.58 CD8_TEM L2
ENSG00000059758 CDK17 -262629 sc-eQTL 4.46e-01 0.0584 0.0764 0.58 CD8_TEM L2
ENSG00000111142 METAP2 664331 sc-eQTL 2.55e-01 -0.102 0.0896 0.58 CD8_TEM L2
ENSG00000111144 LTA4H 94331 sc-eQTL 8.62e-01 -0.0163 0.0937 0.58 CD8_TEM L2
ENSG00000111145 ELK3 -56524 sc-eQTL 9.58e-01 0.0049 0.0921 0.58 CD8_TEM L2
ENSG00000136014 USP44 586375 sc-eQTL 2.21e-01 0.0959 0.0781 0.58 CD8_TEM L2
ENSG00000139343 SNRPF 278923 sc-eQTL 8.52e-01 -0.016 0.0856 0.58 CD8_TEM L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 1.26e-01 0.142 0.0924 0.58 CD8_TEM L2
ENSG00000028203 VEZT 920105 sc-eQTL 5.33e-01 -0.055 0.0882 0.582 MAIT L2
ENSG00000059758 CDK17 -262629 sc-eQTL 7.31e-02 0.0905 0.0502 0.582 MAIT L2
ENSG00000074527 NTN4 346699 sc-eQTL 7.79e-02 0.12 0.0677 0.582 MAIT L2
ENSG00000111142 METAP2 664331 sc-eQTL 4.07e-01 0.0713 0.0857 0.582 MAIT L2
ENSG00000111144 LTA4H 94331 sc-eQTL 2.18e-01 -0.0962 0.0779 0.582 MAIT L2
ENSG00000111145 ELK3 -56524 sc-eQTL 3.55e-04 -0.231 0.0636 0.582 MAIT L2
ENSG00000139343 SNRPF 278923 sc-eQTL 6.73e-01 -0.0322 0.076 0.582 MAIT L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 6.00e-01 0.0448 0.0853 0.582 MAIT L2
ENSG00000188596 CFAP54 -351720 sc-eQTL 7.08e-01 0.0318 0.0846 0.582 MAIT L2
ENSG00000028203 VEZT 920105 sc-eQTL 1.87e-01 -0.119 0.0902 0.573 NK_CD56bright L2
ENSG00000059758 CDK17 -262629 sc-eQTL 6.53e-02 0.097 0.0523 0.573 NK_CD56bright L2
ENSG00000111142 METAP2 664331 sc-eQTL 6.70e-01 0.038 0.0891 0.573 NK_CD56bright L2
ENSG00000111144 LTA4H 94331 sc-eQTL 7.88e-01 -0.021 0.0781 0.573 NK_CD56bright L2
ENSG00000111145 ELK3 -56524 sc-eQTL 9.55e-01 0.00469 0.0829 0.573 NK_CD56bright L2
ENSG00000139343 SNRPF 278923 sc-eQTL 7.25e-01 -0.0305 0.0866 0.573 NK_CD56bright L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 9.56e-01 0.00482 0.0875 0.573 NK_CD56bright L2
ENSG00000028203 VEZT 920105 sc-eQTL 3.50e-01 -0.0816 0.0871 0.58 NK_CD56dim L2
ENSG00000059758 CDK17 -262629 sc-eQTL 7.75e-01 -0.0128 0.045 0.58 NK_CD56dim L2
ENSG00000111142 METAP2 664331 sc-eQTL 7.53e-01 0.0248 0.0788 0.58 NK_CD56dim L2
ENSG00000111144 LTA4H 94331 sc-eQTL 7.34e-01 -0.0276 0.0812 0.58 NK_CD56dim L2
ENSG00000111145 ELK3 -56524 sc-eQTL 7.69e-01 -0.0211 0.0719 0.58 NK_CD56dim L2
ENSG00000139343 SNRPF 278923 sc-eQTL 6.23e-01 -0.0337 0.0684 0.58 NK_CD56dim L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 8.80e-01 0.0119 0.0788 0.58 NK_CD56dim L2
ENSG00000028203 VEZT 920105 sc-eQTL 9.59e-01 0.00495 0.0964 0.584 NK_HLA L2
ENSG00000059758 CDK17 -262629 sc-eQTL 1.62e-01 0.0995 0.071 0.584 NK_HLA L2
ENSG00000111142 METAP2 664331 sc-eQTL 8.97e-01 0.0116 0.0898 0.584 NK_HLA L2
ENSG00000111144 LTA4H 94331 sc-eQTL 1.09e-01 -0.15 0.0929 0.584 NK_HLA L2
ENSG00000111145 ELK3 -56524 sc-eQTL 8.12e-01 0.0207 0.0867 0.584 NK_HLA L2
ENSG00000139343 SNRPF 278923 sc-eQTL 1.58e-01 0.128 0.0899 0.584 NK_HLA L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 2.32e-01 0.102 0.0852 0.584 NK_HLA L2
ENSG00000028203 VEZT 920105 sc-eQTL 2.15e-01 -0.0987 0.0793 0.58 NK_cytokine L2
ENSG00000059758 CDK17 -262629 sc-eQTL 2.05e-01 0.0616 0.0485 0.58 NK_cytokine L2
ENSG00000111142 METAP2 664331 sc-eQTL 1.61e-01 -0.113 0.0805 0.58 NK_cytokine L2
ENSG00000111144 LTA4H 94331 sc-eQTL 1.85e-01 -0.109 0.0819 0.58 NK_cytokine L2
ENSG00000111145 ELK3 -56524 sc-eQTL 5.28e-01 0.0498 0.0787 0.58 NK_cytokine L2
ENSG00000139343 SNRPF 278923 sc-eQTL 5.42e-01 0.0407 0.0667 0.58 NK_cytokine L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 1.87e-01 -0.109 0.0822 0.58 NK_cytokine L2
ENSG00000028203 VEZT 920105 sc-eQTL 7.48e-02 0.184 0.102 0.57 PB L2
ENSG00000059758 CDK17 -262629 sc-eQTL 7.53e-01 0.0279 0.0884 0.57 PB L2
ENSG00000111142 METAP2 664331 sc-eQTL 2.68e-02 -0.227 0.101 0.57 PB L2
ENSG00000111144 LTA4H 94331 sc-eQTL 8.87e-01 -0.0112 0.078 0.57 PB L2
ENSG00000111145 ELK3 -56524 sc-eQTL 4.50e-01 -0.0755 0.0997 0.57 PB L2
ENSG00000136014 USP44 586375 sc-eQTL 1.92e-01 0.12 0.0919 0.57 PB L2
ENSG00000139343 SNRPF 278923 sc-eQTL 2.50e-02 -0.217 0.0953 0.57 PB L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 9.81e-01 -0.00279 0.116 0.57 PB L2
ENSG00000180263 FGD6 920369 sc-eQTL 8.40e-02 0.142 0.0816 0.57 PB L2
ENSG00000028203 VEZT 920105 sc-eQTL 1.24e-01 0.131 0.085 0.576 Pro_T L2
ENSG00000059758 CDK17 -262629 sc-eQTL 3.91e-01 0.0475 0.0553 0.576 Pro_T L2
ENSG00000074527 NTN4 346699 sc-eQTL 9.08e-01 -0.00721 0.0622 0.576 Pro_T L2
ENSG00000111142 METAP2 664331 sc-eQTL 6.93e-02 0.133 0.0728 0.576 Pro_T L2
ENSG00000111144 LTA4H 94331 sc-eQTL 7.30e-01 -0.0253 0.0731 0.576 Pro_T L2
ENSG00000111145 ELK3 -56524 sc-eQTL 1.85e-01 -0.117 0.088 0.576 Pro_T L2
ENSG00000139343 SNRPF 278923 sc-eQTL 3.45e-01 -0.0527 0.0556 0.576 Pro_T L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 7.37e-01 -0.0272 0.081 0.576 Pro_T L2
ENSG00000188596 CFAP54 -351720 sc-eQTL 8.69e-01 0.0108 0.0655 0.576 Pro_T L2
ENSG00000028203 VEZT 920105 sc-eQTL 3.22e-01 -0.0874 0.0879 0.579 Treg L2
ENSG00000059758 CDK17 -262629 sc-eQTL 5.32e-01 -0.0383 0.0611 0.579 Treg L2
ENSG00000111142 METAP2 664331 sc-eQTL 4.51e-01 0.0627 0.0831 0.579 Treg L2
ENSG00000111144 LTA4H 94331 sc-eQTL 9.39e-01 0.00592 0.0774 0.579 Treg L2
ENSG00000111145 ELK3 -56524 sc-eQTL 1.40e-01 -0.103 0.0698 0.579 Treg L2
ENSG00000136014 USP44 586375 sc-eQTL 8.85e-01 0.0114 0.0788 0.579 Treg L2
ENSG00000139343 SNRPF 278923 sc-eQTL 6.77e-01 -0.0338 0.0812 0.579 Treg L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 9.75e-01 0.00288 0.0907 0.579 Treg L2
ENSG00000028203 VEZT 920105 sc-eQTL 5.96e-01 -0.0464 0.0872 0.593 cDC L2
ENSG00000059758 CDK17 -262629 sc-eQTL 6.09e-01 -0.039 0.0761 0.593 cDC L2
ENSG00000084110 HAL 141486 sc-eQTL 9.96e-01 -0.000392 0.0792 0.593 cDC L2
ENSG00000111142 METAP2 664331 sc-eQTL 9.35e-02 -0.16 0.0949 0.593 cDC L2
ENSG00000111144 LTA4H 94331 sc-eQTL 7.88e-01 0.0183 0.0679 0.593 cDC L2
ENSG00000111145 ELK3 -56524 sc-eQTL 6.34e-01 -0.0426 0.0896 0.593 cDC L2
ENSG00000139343 SNRPF 278923 sc-eQTL 6.65e-01 -0.0325 0.075 0.593 cDC L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 6.68e-01 0.0392 0.0914 0.593 cDC L2
ENSG00000180263 FGD6 920369 sc-eQTL 8.53e-02 0.152 0.0878 0.593 cDC L2
ENSG00000257715 AC007298.1 112528 sc-eQTL 9.06e-01 0.00914 0.0771 0.593 cDC L2
ENSG00000028203 VEZT 920105 sc-eQTL 1.88e-01 0.112 0.0852 0.579 cMono_IL1B L2
ENSG00000059758 CDK17 -262629 sc-eQTL 3.47e-02 -0.137 0.0646 0.579 cMono_IL1B L2
ENSG00000084110 HAL 141486 sc-eQTL 5.71e-01 -0.0404 0.0712 0.579 cMono_IL1B L2
ENSG00000111142 METAP2 664331 sc-eQTL 1.85e-01 0.0979 0.0735 0.579 cMono_IL1B L2
ENSG00000111144 LTA4H 94331 sc-eQTL 6.99e-02 -0.139 0.0763 0.579 cMono_IL1B L2
ENSG00000111145 ELK3 -56524 sc-eQTL 4.87e-01 -0.0412 0.0592 0.579 cMono_IL1B L2
ENSG00000139343 SNRPF 278923 sc-eQTL 6.17e-01 -0.0306 0.0611 0.579 cMono_IL1B L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 8.34e-02 -0.145 0.0836 0.579 cMono_IL1B L2
ENSG00000180263 FGD6 920369 sc-eQTL 1.52e-01 -0.0988 0.0686 0.579 cMono_IL1B L2
ENSG00000257715 AC007298.1 112528 sc-eQTL 3.36e-01 -0.0756 0.0784 0.579 cMono_IL1B L2
ENSG00000028203 VEZT 920105 sc-eQTL 5.71e-01 0.0492 0.0867 0.579 cMono_S100A L2
ENSG00000059758 CDK17 -262629 sc-eQTL 4.12e-03 -0.21 0.0724 0.579 cMono_S100A L2
ENSG00000084110 HAL 141486 sc-eQTL 5.87e-01 -0.0451 0.0828 0.579 cMono_S100A L2
ENSG00000111142 METAP2 664331 sc-eQTL 7.34e-01 -0.0285 0.0838 0.579 cMono_S100A L2
ENSG00000111144 LTA4H 94331 sc-eQTL 3.92e-02 -0.17 0.0819 0.579 cMono_S100A L2
ENSG00000111145 ELK3 -56524 sc-eQTL 1.95e-01 -0.0873 0.0671 0.579 cMono_S100A L2
ENSG00000139343 SNRPF 278923 sc-eQTL 9.58e-01 -0.00351 0.0666 0.579 cMono_S100A L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 1.58e-01 -0.127 0.0895 0.579 cMono_S100A L2
ENSG00000180263 FGD6 920369 sc-eQTL 9.68e-01 -0.00325 0.0802 0.579 cMono_S100A L2
ENSG00000257715 AC007298.1 112528 sc-eQTL 9.86e-01 0.00148 0.0846 0.579 cMono_S100A L2
ENSG00000028203 VEZT 920105 sc-eQTL 9.96e-01 0.000502 0.111 0.594 gdT L2
ENSG00000059758 CDK17 -262629 sc-eQTL 9.88e-02 0.121 0.0728 0.594 gdT L2
ENSG00000074527 NTN4 346699 sc-eQTL 3.44e-01 -0.0798 0.0841 0.594 gdT L2
ENSG00000111142 METAP2 664331 sc-eQTL 3.26e-01 0.104 0.105 0.594 gdT L2
ENSG00000111144 LTA4H 94331 sc-eQTL 4.38e-01 -0.0854 0.11 0.594 gdT L2
ENSG00000111145 ELK3 -56524 sc-eQTL 2.20e-01 -0.125 0.101 0.594 gdT L2
ENSG00000139343 SNRPF 278923 sc-eQTL 2.98e-01 0.102 0.0978 0.594 gdT L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 2.84e-01 -0.116 0.108 0.594 gdT L2
ENSG00000188596 CFAP54 -351720 sc-eQTL 4.67e-01 -0.0692 0.0949 0.594 gdT L2
ENSG00000028203 VEZT 920105 sc-eQTL 1.86e-01 -0.123 0.093 0.582 intMono L2
ENSG00000059758 CDK17 -262629 sc-eQTL 1.11e-01 -0.132 0.0826 0.582 intMono L2
ENSG00000084110 HAL 141486 sc-eQTL 7.89e-01 -0.0225 0.084 0.582 intMono L2
ENSG00000111142 METAP2 664331 sc-eQTL 5.85e-02 -0.179 0.0943 0.582 intMono L2
ENSG00000111144 LTA4H 94331 sc-eQTL 2.04e-02 -0.199 0.085 0.582 intMono L2
ENSG00000111145 ELK3 -56524 sc-eQTL 8.64e-01 -0.0132 0.0768 0.582 intMono L2
ENSG00000139343 SNRPF 278923 sc-eQTL 1.93e-01 -0.107 0.0817 0.582 intMono L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 2.94e-01 -0.0894 0.085 0.582 intMono L2
ENSG00000180263 FGD6 920369 sc-eQTL 4.52e-04 -0.286 0.0802 0.582 intMono L2
ENSG00000257715 AC007298.1 112528 sc-eQTL 6.47e-01 -0.0393 0.0857 0.582 intMono L2
ENSG00000028203 VEZT 920105 sc-eQTL 2.85e-01 -0.0956 0.0891 0.588 ncMono L2
ENSG00000059758 CDK17 -262629 sc-eQTL 9.25e-01 0.00656 0.0696 0.588 ncMono L2
ENSG00000084110 HAL 141486 sc-eQTL 9.72e-01 0.00276 0.0777 0.588 ncMono L2
ENSG00000111142 METAP2 664331 sc-eQTL 6.65e-01 -0.0407 0.0939 0.588 ncMono L2
ENSG00000111144 LTA4H 94331 sc-eQTL 5.73e-01 -0.0488 0.0865 0.588 ncMono L2
ENSG00000111145 ELK3 -56524 sc-eQTL 2.82e-01 -0.08 0.0741 0.588 ncMono L2
ENSG00000139343 SNRPF 278923 sc-eQTL 4.79e-02 -0.15 0.0752 0.588 ncMono L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 8.77e-01 0.0125 0.0806 0.588 ncMono L2
ENSG00000180263 FGD6 920369 sc-eQTL 8.63e-01 -0.0153 0.0883 0.588 ncMono L2
ENSG00000257715 AC007298.1 112528 sc-eQTL 2.01e-01 0.118 0.0917 0.588 ncMono L2
ENSG00000028203 VEZT 920105 sc-eQTL 4.53e-01 0.0728 0.0967 0.588 pDC L2
ENSG00000059758 CDK17 -262629 sc-eQTL 8.01e-01 -0.022 0.0867 0.588 pDC L2
ENSG00000084110 HAL 141486 sc-eQTL 8.56e-01 0.0133 0.0732 0.588 pDC L2
ENSG00000111142 METAP2 664331 sc-eQTL 3.55e-01 0.0915 0.0987 0.588 pDC L2
ENSG00000111144 LTA4H 94331 sc-eQTL 3.81e-01 0.0719 0.0818 0.588 pDC L2
ENSG00000111145 ELK3 -56524 sc-eQTL 8.10e-01 0.0242 0.1 0.588 pDC L2
ENSG00000139343 SNRPF 278923 sc-eQTL 7.86e-01 0.0237 0.0875 0.588 pDC L2
ENSG00000139350 NEDD1 -769372 sc-eQTL 9.47e-01 0.00642 0.0966 0.588 pDC L2
ENSG00000180263 FGD6 920369 sc-eQTL 3.54e-01 0.0789 0.0848 0.588 pDC L2
ENSG00000257715 AC007298.1 112528 sc-eQTL 1.41e-01 0.122 0.0822 0.588 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 920105 sc-eQTL 2.36e-01 -0.103 0.0863 0.579 B_Memory LOneK1K
ENSG00000059758 CDK17 -262629 sc-eQTL 7.85e-01 0.0159 0.058 0.579 B_Memory LOneK1K
ENSG00000111142 METAP2 664331 sc-eQTL 3.34e-01 -0.078 0.0805 0.579 B_Memory LOneK1K
ENSG00000111144 LTA4H 94331 sc-eQTL 6.47e-01 -0.0276 0.0602 0.579 B_Memory LOneK1K
ENSG00000111145 ELK3 -56524 sc-eQTL 3.44e-02 -0.145 0.0681 0.579 B_Memory LOneK1K
ENSG00000136014 USP44 586375 sc-eQTL 6.03e-01 -0.0446 0.0857 0.579 B_Memory LOneK1K
ENSG00000139343 SNRPF 278923 sc-eQTL 8.37e-01 -0.0138 0.0667 0.579 B_Memory LOneK1K
ENSG00000139350 NEDD1 -769372 sc-eQTL 4.20e-01 -0.0707 0.0874 0.579 B_Memory LOneK1K
ENSG00000180263 FGD6 920369 sc-eQTL 2.64e-01 -0.0857 0.0766 0.579 B_Memory LOneK1K
ENSG00000028203 VEZT 920105 sc-eQTL 3.94e-01 -0.0686 0.0803 0.579 B_Naive LOneK1K
ENSG00000059758 CDK17 -262629 sc-eQTL 3.96e-01 -0.0421 0.0495 0.579 B_Naive LOneK1K
ENSG00000111142 METAP2 664331 sc-eQTL 5.58e-01 0.0393 0.0671 0.579 B_Naive LOneK1K
ENSG00000111144 LTA4H 94331 sc-eQTL 4.49e-01 -0.0422 0.0556 0.579 B_Naive LOneK1K
ENSG00000111145 ELK3 -56524 sc-eQTL 1.27e-02 -0.157 0.0625 0.579 B_Naive LOneK1K
ENSG00000136014 USP44 586375 sc-eQTL 2.54e-01 0.0884 0.0773 0.579 B_Naive LOneK1K
ENSG00000139343 SNRPF 278923 sc-eQTL 4.33e-01 0.0501 0.0637 0.579 B_Naive LOneK1K
ENSG00000139350 NEDD1 -769372 sc-eQTL 4.37e-01 -0.0658 0.0844 0.579 B_Naive LOneK1K
ENSG00000180263 FGD6 920369 sc-eQTL 3.09e-01 0.0867 0.085 0.579 B_Naive LOneK1K
ENSG00000028203 VEZT 920105 sc-eQTL 1.91e-01 0.103 0.0784 0.579 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -262629 sc-eQTL 1.57e-03 -0.185 0.0576 0.579 CD14_Mono LOneK1K
ENSG00000084110 HAL 141486 sc-eQTL 4.77e-01 -0.0509 0.0714 0.579 CD14_Mono LOneK1K
ENSG00000111142 METAP2 664331 sc-eQTL 2.92e-01 0.0709 0.0671 0.579 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 94331 sc-eQTL 6.59e-02 -0.144 0.0778 0.579 CD14_Mono LOneK1K
ENSG00000111145 ELK3 -56524 sc-eQTL 2.25e-01 -0.0688 0.0565 0.579 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 278923 sc-eQTL 7.73e-01 -0.0158 0.0547 0.579 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -769372 sc-eQTL 3.11e-02 -0.184 0.0849 0.579 CD14_Mono LOneK1K
ENSG00000180263 FGD6 920369 sc-eQTL 2.89e-01 -0.0721 0.0678 0.579 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 112528 sc-eQTL 6.58e-01 -0.0352 0.0794 0.579 CD14_Mono LOneK1K
ENSG00000028203 VEZT 920105 sc-eQTL 1.64e-01 -0.126 0.0905 0.58 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -262629 sc-eQTL 2.61e-01 -0.0697 0.0619 0.58 CD16_Mono LOneK1K
ENSG00000084110 HAL 141486 sc-eQTL 8.97e-01 0.00954 0.0734 0.58 CD16_Mono LOneK1K
ENSG00000111142 METAP2 664331 sc-eQTL 1.19e-01 -0.13 0.0828 0.58 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 94331 sc-eQTL 9.76e-02 -0.135 0.0809 0.58 CD16_Mono LOneK1K
ENSG00000111145 ELK3 -56524 sc-eQTL 2.59e-01 -0.068 0.0601 0.58 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 278923 sc-eQTL 2.99e-02 -0.134 0.0614 0.58 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -769372 sc-eQTL 4.74e-01 -0.057 0.0796 0.58 CD16_Mono LOneK1K
ENSG00000180263 FGD6 920369 sc-eQTL 6.23e-02 -0.142 0.0757 0.58 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 112528 sc-eQTL 8.21e-01 -0.0191 0.0843 0.58 CD16_Mono LOneK1K
ENSG00000028203 VEZT 920105 sc-eQTL 9.61e-02 -0.132 0.0792 0.58 NK_CD56dim LOneK1K
ENSG00000059758 CDK17 -262629 sc-eQTL 8.20e-01 0.00954 0.0419 0.58 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 664331 sc-eQTL 8.58e-01 -0.0114 0.0637 0.58 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 94331 sc-eQTL 2.31e-01 -0.0872 0.0726 0.58 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 -56524 sc-eQTL 9.53e-01 -0.00392 0.0666 0.58 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 278923 sc-eQTL 8.15e-01 -0.0133 0.057 0.58 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -769372 sc-eQTL 9.75e-01 -0.00224 0.0711 0.58 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111144 LTA4H 94331 eQTL 0.0329 -0.0415 0.0194 0.0 0.0 0.457
ENSG00000111145 ELK3 -56524 eQTL 0.0464 -0.0328 0.0165 0.0 0.0 0.457

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina