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Genes within 1Mb (chr12:96136832:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 919086 sc-eQTL 7.60e-02 -0.132 0.074 0.365 B L1
ENSG00000059758 CDK17 -263648 sc-eQTL 9.48e-01 0.003 0.0463 0.365 B L1
ENSG00000111142 METAP2 663312 sc-eQTL 8.72e-01 -0.0106 0.0656 0.365 B L1
ENSG00000111144 LTA4H 93312 sc-eQTL 8.92e-02 -0.0976 0.0572 0.365 B L1
ENSG00000111145 ELK3 -57543 sc-eQTL 1.79e-03 -0.189 0.0599 0.365 B L1
ENSG00000136014 USP44 585356 sc-eQTL 7.14e-02 0.136 0.075 0.365 B L1
ENSG00000139343 SNRPF 277904 sc-eQTL 9.97e-01 0.000236 0.0557 0.365 B L1
ENSG00000139350 NEDD1 -770391 sc-eQTL 3.44e-01 -0.077 0.0811 0.365 B L1
ENSG00000180263 FGD6 919350 sc-eQTL 1.81e-01 0.101 0.0754 0.365 B L1
ENSG00000028203 VEZT 919086 sc-eQTL 7.30e-01 -0.0216 0.0624 0.365 CD4T L1
ENSG00000059758 CDK17 -263648 sc-eQTL 6.33e-01 -0.0185 0.0388 0.365 CD4T L1
ENSG00000111142 METAP2 663312 sc-eQTL 1.18e-01 -0.0844 0.0538 0.365 CD4T L1
ENSG00000111144 LTA4H 93312 sc-eQTL 8.67e-01 0.00894 0.0533 0.365 CD4T L1
ENSG00000111145 ELK3 -57543 sc-eQTL 8.88e-01 -0.00811 0.0577 0.365 CD4T L1
ENSG00000136014 USP44 585356 sc-eQTL 8.49e-02 -0.142 0.0818 0.365 CD4T L1
ENSG00000139343 SNRPF 277904 sc-eQTL 5.76e-01 0.0282 0.0504 0.365 CD4T L1
ENSG00000139350 NEDD1 -770391 sc-eQTL 3.50e-01 0.0581 0.062 0.365 CD4T L1
ENSG00000028203 VEZT 919086 sc-eQTL 7.32e-01 -0.0255 0.0744 0.365 CD8T L1
ENSG00000059758 CDK17 -263648 sc-eQTL 4.85e-01 -0.0276 0.0394 0.365 CD8T L1
ENSG00000111142 METAP2 663312 sc-eQTL 3.96e-01 -0.0541 0.0636 0.365 CD8T L1
ENSG00000111144 LTA4H 93312 sc-eQTL 1.85e-02 -0.0993 0.0418 0.365 CD8T L1
ENSG00000111145 ELK3 -57543 sc-eQTL 7.31e-01 -0.0219 0.0638 0.365 CD8T L1
ENSG00000136014 USP44 585356 sc-eQTL 1.01e-01 -0.119 0.0721 0.365 CD8T L1
ENSG00000139343 SNRPF 277904 sc-eQTL 5.25e-02 0.101 0.0518 0.365 CD8T L1
ENSG00000139350 NEDD1 -770391 sc-eQTL 9.43e-01 0.00496 0.0695 0.365 CD8T L1
ENSG00000028203 VEZT 919086 sc-eQTL 9.31e-01 -0.00751 0.087 0.372 DC L1
ENSG00000059758 CDK17 -263648 sc-eQTL 6.51e-01 0.033 0.0727 0.372 DC L1
ENSG00000084110 HAL 140467 sc-eQTL 4.17e-01 -0.0673 0.0826 0.372 DC L1
ENSG00000111142 METAP2 663312 sc-eQTL 5.43e-01 -0.0555 0.0912 0.372 DC L1
ENSG00000111144 LTA4H 93312 sc-eQTL 9.09e-01 0.00772 0.0677 0.372 DC L1
ENSG00000111145 ELK3 -57543 sc-eQTL 3.63e-01 -0.0754 0.0827 0.372 DC L1
ENSG00000139343 SNRPF 277904 sc-eQTL 3.53e-01 0.0641 0.0688 0.372 DC L1
ENSG00000139350 NEDD1 -770391 sc-eQTL 8.32e-01 0.0187 0.0885 0.372 DC L1
ENSG00000180263 FGD6 919350 sc-eQTL 1.67e-01 0.113 0.0814 0.372 DC L1
ENSG00000257715 AC007298.1 111509 sc-eQTL 9.58e-01 0.00423 0.0799 0.372 DC L1
ENSG00000028203 VEZT 919086 sc-eQTL 1.00e+00 -1.32e-05 0.0817 0.365 Mono L1
ENSG00000059758 CDK17 -263648 sc-eQTL 5.73e-01 -0.0337 0.0597 0.365 Mono L1
ENSG00000084110 HAL 140467 sc-eQTL 8.97e-01 0.00971 0.0753 0.365 Mono L1
ENSG00000111142 METAP2 663312 sc-eQTL 7.67e-01 -0.0193 0.065 0.365 Mono L1
ENSG00000111144 LTA4H 93312 sc-eQTL 1.98e-01 -0.109 0.0847 0.365 Mono L1
ENSG00000111145 ELK3 -57543 sc-eQTL 1.36e-01 -0.0849 0.0568 0.365 Mono L1
ENSG00000139343 SNRPF 277904 sc-eQTL 8.99e-01 -0.00686 0.0538 0.365 Mono L1
ENSG00000139350 NEDD1 -770391 sc-eQTL 8.19e-02 -0.143 0.0821 0.365 Mono L1
ENSG00000180263 FGD6 919350 sc-eQTL 3.69e-01 -0.0623 0.0691 0.365 Mono L1
ENSG00000257715 AC007298.1 111509 sc-eQTL 9.38e-01 -0.00625 0.0801 0.365 Mono L1
ENSG00000028203 VEZT 919086 sc-eQTL 1.01e-01 -0.136 0.0822 0.367 NK L1
ENSG00000059758 CDK17 -263648 sc-eQTL 5.19e-01 -0.0285 0.0442 0.367 NK L1
ENSG00000111142 METAP2 663312 sc-eQTL 3.15e-01 -0.0658 0.0653 0.367 NK L1
ENSG00000111144 LTA4H 93312 sc-eQTL 8.82e-01 -0.0112 0.0751 0.367 NK L1
ENSG00000111145 ELK3 -57543 sc-eQTL 6.95e-01 -0.028 0.0712 0.367 NK L1
ENSG00000139343 SNRPF 277904 sc-eQTL 7.34e-01 0.0201 0.0591 0.367 NK L1
ENSG00000139350 NEDD1 -770391 sc-eQTL 6.30e-01 -0.036 0.0747 0.367 NK L1
ENSG00000028203 VEZT 919086 sc-eQTL 7.11e-01 -0.034 0.0916 0.365 Other_T L1
ENSG00000059758 CDK17 -263648 sc-eQTL 3.76e-02 0.0773 0.0369 0.365 Other_T L1
ENSG00000074527 NTN4 345680 sc-eQTL 4.24e-01 0.0552 0.0689 0.365 Other_T L1
ENSG00000111142 METAP2 663312 sc-eQTL 1.03e-01 0.116 0.0708 0.365 Other_T L1
ENSG00000111144 LTA4H 93312 sc-eQTL 5.15e-01 0.0508 0.0779 0.365 Other_T L1
ENSG00000111145 ELK3 -57543 sc-eQTL 3.29e-03 -0.177 0.0596 0.365 Other_T L1
ENSG00000139343 SNRPF 277904 sc-eQTL 6.93e-01 0.0223 0.0565 0.365 Other_T L1
ENSG00000139350 NEDD1 -770391 sc-eQTL 1.44e-01 -0.126 0.0857 0.365 Other_T L1
ENSG00000188596 CFAP54 -352739 sc-eQTL 3.23e-01 0.0882 0.089 0.365 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 919086 sc-eQTL 6.93e-01 0.04 0.101 0.36 B_Activated L2
ENSG00000059758 CDK17 -263648 sc-eQTL 4.60e-01 0.062 0.0837 0.36 B_Activated L2
ENSG00000111142 METAP2 663312 sc-eQTL 1.76e-01 0.143 0.105 0.36 B_Activated L2
ENSG00000111144 LTA4H 93312 sc-eQTL 6.09e-01 0.0486 0.0948 0.36 B_Activated L2
ENSG00000111145 ELK3 -57543 sc-eQTL 5.34e-01 0.0626 0.1 0.36 B_Activated L2
ENSG00000136014 USP44 585356 sc-eQTL 3.75e-01 0.0684 0.077 0.36 B_Activated L2
ENSG00000139343 SNRPF 277904 sc-eQTL 6.10e-01 0.0483 0.0947 0.36 B_Activated L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 3.92e-01 -0.0848 0.0989 0.36 B_Activated L2
ENSG00000180263 FGD6 919350 sc-eQTL 1.78e-01 0.0962 0.0711 0.36 B_Activated L2
ENSG00000028203 VEZT 919086 sc-eQTL 7.53e-01 0.0285 0.0905 0.365 B_Intermediate L2
ENSG00000059758 CDK17 -263648 sc-eQTL 7.72e-01 0.0211 0.0729 0.365 B_Intermediate L2
ENSG00000111142 METAP2 663312 sc-eQTL 3.54e-01 0.0774 0.0834 0.365 B_Intermediate L2
ENSG00000111144 LTA4H 93312 sc-eQTL 1.98e-01 -0.0908 0.0703 0.365 B_Intermediate L2
ENSG00000111145 ELK3 -57543 sc-eQTL 4.79e-03 -0.223 0.0781 0.365 B_Intermediate L2
ENSG00000136014 USP44 585356 sc-eQTL 2.48e-01 -0.108 0.0936 0.365 B_Intermediate L2
ENSG00000139343 SNRPF 277904 sc-eQTL 3.80e-01 0.0696 0.0791 0.365 B_Intermediate L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 9.29e-01 0.00828 0.0929 0.365 B_Intermediate L2
ENSG00000180263 FGD6 919350 sc-eQTL 3.49e-01 -0.0785 0.0837 0.365 B_Intermediate L2
ENSG00000028203 VEZT 919086 sc-eQTL 9.25e-03 -0.246 0.0936 0.364 B_Memory L2
ENSG00000059758 CDK17 -263648 sc-eQTL 6.17e-01 0.0355 0.0709 0.364 B_Memory L2
ENSG00000111142 METAP2 663312 sc-eQTL 8.37e-02 -0.159 0.0916 0.364 B_Memory L2
ENSG00000111144 LTA4H 93312 sc-eQTL 4.45e-01 -0.0626 0.0818 0.364 B_Memory L2
ENSG00000111145 ELK3 -57543 sc-eQTL 7.08e-01 -0.0302 0.0805 0.364 B_Memory L2
ENSG00000136014 USP44 585356 sc-eQTL 7.10e-01 -0.033 0.0884 0.364 B_Memory L2
ENSG00000139343 SNRPF 277904 sc-eQTL 3.58e-02 -0.178 0.0845 0.364 B_Memory L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 6.23e-01 -0.0464 0.0944 0.364 B_Memory L2
ENSG00000180263 FGD6 919350 sc-eQTL 6.87e-01 -0.0355 0.0879 0.364 B_Memory L2
ENSG00000028203 VEZT 919086 sc-eQTL 4.66e-01 -0.0639 0.0875 0.365 B_Naive1 L2
ENSG00000059758 CDK17 -263648 sc-eQTL 9.99e-01 -8.71e-05 0.0576 0.365 B_Naive1 L2
ENSG00000111142 METAP2 663312 sc-eQTL 7.06e-01 0.0282 0.0745 0.365 B_Naive1 L2
ENSG00000111144 LTA4H 93312 sc-eQTL 3.89e-01 -0.052 0.0602 0.365 B_Naive1 L2
ENSG00000111145 ELK3 -57543 sc-eQTL 2.42e-01 -0.0834 0.0711 0.365 B_Naive1 L2
ENSG00000136014 USP44 585356 sc-eQTL 1.26e-01 0.137 0.0892 0.365 B_Naive1 L2
ENSG00000139343 SNRPF 277904 sc-eQTL 9.09e-01 0.0079 0.0694 0.365 B_Naive1 L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 4.63e-01 -0.0653 0.0888 0.365 B_Naive1 L2
ENSG00000180263 FGD6 919350 sc-eQTL 7.58e-02 0.151 0.0845 0.365 B_Naive1 L2
ENSG00000028203 VEZT 919086 sc-eQTL 1.74e-01 -0.129 0.0948 0.365 B_Naive2 L2
ENSG00000059758 CDK17 -263648 sc-eQTL 1.03e-01 -0.119 0.0724 0.365 B_Naive2 L2
ENSG00000111142 METAP2 663312 sc-eQTL 8.79e-01 -0.0134 0.088 0.365 B_Naive2 L2
ENSG00000111144 LTA4H 93312 sc-eQTL 8.89e-01 -0.00966 0.069 0.365 B_Naive2 L2
ENSG00000111145 ELK3 -57543 sc-eQTL 5.09e-02 -0.158 0.0807 0.365 B_Naive2 L2
ENSG00000136014 USP44 585356 sc-eQTL 2.66e-02 0.194 0.0869 0.365 B_Naive2 L2
ENSG00000139343 SNRPF 277904 sc-eQTL 4.31e-01 0.0636 0.0807 0.365 B_Naive2 L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 5.61e-01 -0.0559 0.096 0.365 B_Naive2 L2
ENSG00000180263 FGD6 919350 sc-eQTL 2.42e-01 0.0843 0.0718 0.365 B_Naive2 L2
ENSG00000028203 VEZT 919086 sc-eQTL 8.00e-01 -0.0242 0.0953 0.368 CD4_CTL L2
ENSG00000059758 CDK17 -263648 sc-eQTL 3.77e-01 0.0615 0.0695 0.368 CD4_CTL L2
ENSG00000111142 METAP2 663312 sc-eQTL 7.85e-01 -0.0272 0.0996 0.368 CD4_CTL L2
ENSG00000111144 LTA4H 93312 sc-eQTL 2.43e-01 -0.115 0.0978 0.368 CD4_CTL L2
ENSG00000111145 ELK3 -57543 sc-eQTL 5.44e-01 0.0604 0.0993 0.368 CD4_CTL L2
ENSG00000136014 USP44 585356 sc-eQTL 7.36e-01 -0.0267 0.0793 0.368 CD4_CTL L2
ENSG00000139343 SNRPF 277904 sc-eQTL 6.82e-01 0.0354 0.0863 0.368 CD4_CTL L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 8.62e-01 0.0173 0.0999 0.368 CD4_CTL L2
ENSG00000028203 VEZT 919086 sc-eQTL 6.74e-01 0.0298 0.0707 0.365 CD4_Naive L2
ENSG00000059758 CDK17 -263648 sc-eQTL 7.61e-01 0.0129 0.0425 0.365 CD4_Naive L2
ENSG00000111142 METAP2 663312 sc-eQTL 4.56e-01 -0.0457 0.0612 0.365 CD4_Naive L2
ENSG00000111144 LTA4H 93312 sc-eQTL 8.79e-01 -0.00933 0.0614 0.365 CD4_Naive L2
ENSG00000111145 ELK3 -57543 sc-eQTL 5.92e-01 0.0329 0.0614 0.365 CD4_Naive L2
ENSG00000136014 USP44 585356 sc-eQTL 5.90e-02 -0.162 0.0854 0.365 CD4_Naive L2
ENSG00000139343 SNRPF 277904 sc-eQTL 1.17e-01 0.0855 0.0543 0.365 CD4_Naive L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 4.18e-01 0.0545 0.0671 0.365 CD4_Naive L2
ENSG00000028203 VEZT 919086 sc-eQTL 2.15e-01 -0.0928 0.0747 0.365 CD4_TCM L2
ENSG00000059758 CDK17 -263648 sc-eQTL 2.87e-01 -0.0439 0.0411 0.365 CD4_TCM L2
ENSG00000111142 METAP2 663312 sc-eQTL 1.11e-01 -0.112 0.0698 0.365 CD4_TCM L2
ENSG00000111144 LTA4H 93312 sc-eQTL 7.70e-01 -0.0205 0.07 0.365 CD4_TCM L2
ENSG00000111145 ELK3 -57543 sc-eQTL 5.52e-01 -0.0409 0.0688 0.365 CD4_TCM L2
ENSG00000136014 USP44 585356 sc-eQTL 6.73e-01 -0.0402 0.0951 0.365 CD4_TCM L2
ENSG00000139343 SNRPF 277904 sc-eQTL 3.16e-01 -0.0566 0.0563 0.365 CD4_TCM L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 6.96e-01 -0.0302 0.0771 0.365 CD4_TCM L2
ENSG00000028203 VEZT 919086 sc-eQTL 5.11e-01 -0.064 0.0972 0.365 CD4_TEM L2
ENSG00000059758 CDK17 -263648 sc-eQTL 2.99e-01 -0.0535 0.0514 0.365 CD4_TEM L2
ENSG00000111142 METAP2 663312 sc-eQTL 3.26e-01 -0.0846 0.086 0.365 CD4_TEM L2
ENSG00000111144 LTA4H 93312 sc-eQTL 2.87e-01 0.0848 0.0794 0.365 CD4_TEM L2
ENSG00000111145 ELK3 -57543 sc-eQTL 1.68e-01 0.102 0.0736 0.365 CD4_TEM L2
ENSG00000136014 USP44 585356 sc-eQTL 7.26e-01 -0.032 0.091 0.365 CD4_TEM L2
ENSG00000139343 SNRPF 277904 sc-eQTL 2.49e-01 -0.0893 0.0772 0.365 CD4_TEM L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 5.03e-01 -0.0615 0.0917 0.365 CD4_TEM L2
ENSG00000028203 VEZT 919086 sc-eQTL 7.59e-01 -0.0259 0.0846 0.365 CD8_CTL L2
ENSG00000059758 CDK17 -263648 sc-eQTL 7.15e-01 -0.0179 0.049 0.365 CD8_CTL L2
ENSG00000111142 METAP2 663312 sc-eQTL 6.20e-01 0.0421 0.0846 0.365 CD8_CTL L2
ENSG00000111144 LTA4H 93312 sc-eQTL 1.03e-01 -0.144 0.0879 0.365 CD8_CTL L2
ENSG00000111145 ELK3 -57543 sc-eQTL 1.94e-01 -0.105 0.0802 0.365 CD8_CTL L2
ENSG00000136014 USP44 585356 sc-eQTL 1.93e-01 -0.117 0.0894 0.365 CD8_CTL L2
ENSG00000139343 SNRPF 277904 sc-eQTL 5.89e-01 0.04 0.074 0.365 CD8_CTL L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 2.51e-01 -0.0953 0.0827 0.365 CD8_CTL L2
ENSG00000028203 VEZT 919086 sc-eQTL 1.98e-01 -0.113 0.0873 0.365 CD8_Naive L2
ENSG00000059758 CDK17 -263648 sc-eQTL 7.33e-01 -0.0204 0.0597 0.365 CD8_Naive L2
ENSG00000111142 METAP2 663312 sc-eQTL 5.27e-01 -0.0501 0.0792 0.365 CD8_Naive L2
ENSG00000111144 LTA4H 93312 sc-eQTL 9.86e-01 -0.00129 0.0715 0.365 CD8_Naive L2
ENSG00000111145 ELK3 -57543 sc-eQTL 8.61e-01 -0.0133 0.0756 0.365 CD8_Naive L2
ENSG00000136014 USP44 585356 sc-eQTL 9.41e-03 -0.205 0.0782 0.365 CD8_Naive L2
ENSG00000139343 SNRPF 277904 sc-eQTL 6.19e-01 0.0338 0.068 0.365 CD8_Naive L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 6.05e-01 0.0419 0.0809 0.365 CD8_Naive L2
ENSG00000028203 VEZT 919086 sc-eQTL 1.20e-02 -0.248 0.0976 0.359 CD8_TCM L2
ENSG00000059758 CDK17 -263648 sc-eQTL 7.54e-01 -0.0211 0.0674 0.359 CD8_TCM L2
ENSG00000111142 METAP2 663312 sc-eQTL 5.57e-01 -0.059 0.1 0.359 CD8_TCM L2
ENSG00000111144 LTA4H 93312 sc-eQTL 3.11e-01 -0.1 0.0988 0.359 CD8_TCM L2
ENSG00000111145 ELK3 -57543 sc-eQTL 7.55e-02 0.149 0.0832 0.359 CD8_TCM L2
ENSG00000136014 USP44 585356 sc-eQTL 5.27e-01 -0.0574 0.0907 0.359 CD8_TCM L2
ENSG00000139343 SNRPF 277904 sc-eQTL 3.37e-02 0.204 0.0954 0.359 CD8_TCM L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 6.68e-01 -0.0406 0.0945 0.359 CD8_TCM L2
ENSG00000028203 VEZT 919086 sc-eQTL 5.45e-01 0.057 0.0941 0.363 CD8_TEM L2
ENSG00000059758 CDK17 -263648 sc-eQTL 4.76e-01 -0.0555 0.0778 0.363 CD8_TEM L2
ENSG00000111142 METAP2 663312 sc-eQTL 1.31e-01 -0.138 0.0909 0.363 CD8_TEM L2
ENSG00000111144 LTA4H 93312 sc-eQTL 2.96e-01 -0.0998 0.0951 0.363 CD8_TEM L2
ENSG00000111145 ELK3 -57543 sc-eQTL 7.98e-01 -0.024 0.0938 0.363 CD8_TEM L2
ENSG00000136014 USP44 585356 sc-eQTL 2.38e-02 0.18 0.0788 0.363 CD8_TEM L2
ENSG00000139343 SNRPF 277904 sc-eQTL 8.32e-01 -0.0186 0.0872 0.363 CD8_TEM L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 3.71e-01 0.0847 0.0944 0.363 CD8_TEM L2
ENSG00000028203 VEZT 919086 sc-eQTL 6.83e-01 -0.0378 0.0926 0.368 MAIT L2
ENSG00000059758 CDK17 -263648 sc-eQTL 5.16e-02 0.103 0.0526 0.368 MAIT L2
ENSG00000074527 NTN4 345680 sc-eQTL 1.17e-01 0.112 0.0711 0.368 MAIT L2
ENSG00000111142 METAP2 663312 sc-eQTL 1.41e-01 0.132 0.0896 0.368 MAIT L2
ENSG00000111144 LTA4H 93312 sc-eQTL 9.35e-01 -0.00666 0.082 0.368 MAIT L2
ENSG00000111145 ELK3 -57543 sc-eQTL 2.13e-03 -0.209 0.0673 0.368 MAIT L2
ENSG00000139343 SNRPF 277904 sc-eQTL 6.90e-01 -0.0318 0.0797 0.368 MAIT L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 5.58e-01 -0.0526 0.0895 0.368 MAIT L2
ENSG00000188596 CFAP54 -352739 sc-eQTL 8.15e-01 -0.0208 0.0888 0.368 MAIT L2
ENSG00000028203 VEZT 919086 sc-eQTL 2.41e-02 -0.216 0.0951 0.36 NK_CD56bright L2
ENSG00000059758 CDK17 -263648 sc-eQTL 9.32e-01 -0.00477 0.0561 0.36 NK_CD56bright L2
ENSG00000111142 METAP2 663312 sc-eQTL 9.46e-01 -0.00641 0.0947 0.36 NK_CD56bright L2
ENSG00000111144 LTA4H 93312 sc-eQTL 9.88e-01 0.00125 0.083 0.36 NK_CD56bright L2
ENSG00000111145 ELK3 -57543 sc-eQTL 7.08e-01 -0.033 0.0881 0.36 NK_CD56bright L2
ENSG00000139343 SNRPF 277904 sc-eQTL 7.53e-01 0.0291 0.0921 0.36 NK_CD56bright L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 7.98e-01 0.0238 0.093 0.36 NK_CD56bright L2
ENSG00000028203 VEZT 919086 sc-eQTL 7.52e-01 -0.0296 0.0936 0.366 NK_CD56dim L2
ENSG00000059758 CDK17 -263648 sc-eQTL 2.66e-01 -0.0537 0.0481 0.366 NK_CD56dim L2
ENSG00000111142 METAP2 663312 sc-eQTL 9.50e-02 -0.141 0.084 0.366 NK_CD56dim L2
ENSG00000111144 LTA4H 93312 sc-eQTL 7.58e-01 0.0269 0.0871 0.366 NK_CD56dim L2
ENSG00000111145 ELK3 -57543 sc-eQTL 9.06e-01 0.00914 0.0771 0.366 NK_CD56dim L2
ENSG00000139343 SNRPF 277904 sc-eQTL 4.38e-01 -0.057 0.0733 0.366 NK_CD56dim L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 5.22e-01 0.0542 0.0845 0.366 NK_CD56dim L2
ENSG00000028203 VEZT 919086 sc-eQTL 6.08e-01 -0.0525 0.102 0.377 NK_HLA L2
ENSG00000059758 CDK17 -263648 sc-eQTL 6.05e-01 0.0392 0.0757 0.377 NK_HLA L2
ENSG00000111142 METAP2 663312 sc-eQTL 1.82e-01 -0.127 0.0949 0.377 NK_HLA L2
ENSG00000111144 LTA4H 93312 sc-eQTL 1.73e-01 -0.135 0.0988 0.377 NK_HLA L2
ENSG00000111145 ELK3 -57543 sc-eQTL 3.63e-01 -0.0838 0.0919 0.377 NK_HLA L2
ENSG00000139343 SNRPF 277904 sc-eQTL 4.11e-03 0.273 0.094 0.377 NK_HLA L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 7.86e-01 0.0247 0.0908 0.377 NK_HLA L2
ENSG00000028203 VEZT 919086 sc-eQTL 4.41e-01 -0.0663 0.0858 0.366 NK_cytokine L2
ENSG00000059758 CDK17 -263648 sc-eQTL 3.29e-01 0.0513 0.0524 0.366 NK_cytokine L2
ENSG00000111142 METAP2 663312 sc-eQTL 8.53e-01 -0.0162 0.0873 0.366 NK_cytokine L2
ENSG00000111144 LTA4H 93312 sc-eQTL 1.20e-01 -0.138 0.0883 0.366 NK_cytokine L2
ENSG00000111145 ELK3 -57543 sc-eQTL 7.48e-01 -0.0273 0.085 0.366 NK_cytokine L2
ENSG00000139343 SNRPF 277904 sc-eQTL 5.94e-01 0.0384 0.072 0.366 NK_cytokine L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 1.13e-01 -0.141 0.0885 0.366 NK_cytokine L2
ENSG00000028203 VEZT 919086 sc-eQTL 2.21e-01 0.134 0.109 0.378 PB L2
ENSG00000059758 CDK17 -263648 sc-eQTL 3.80e-01 0.0824 0.0934 0.378 PB L2
ENSG00000111142 METAP2 663312 sc-eQTL 3.97e-02 -0.224 0.108 0.378 PB L2
ENSG00000111144 LTA4H 93312 sc-eQTL 2.49e-01 -0.0952 0.0822 0.378 PB L2
ENSG00000111145 ELK3 -57543 sc-eQTL 5.67e-01 -0.0607 0.106 0.378 PB L2
ENSG00000136014 USP44 585356 sc-eQTL 5.43e-01 0.0597 0.0979 0.378 PB L2
ENSG00000139343 SNRPF 277904 sc-eQTL 6.38e-02 -0.191 0.102 0.378 PB L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 7.92e-01 0.0325 0.123 0.378 PB L2
ENSG00000180263 FGD6 919350 sc-eQTL 4.91e-01 0.0604 0.0874 0.378 PB L2
ENSG00000028203 VEZT 919086 sc-eQTL 7.61e-01 -0.0276 0.0908 0.361 Pro_T L2
ENSG00000059758 CDK17 -263648 sc-eQTL 2.73e-01 0.0645 0.0586 0.361 Pro_T L2
ENSG00000074527 NTN4 345680 sc-eQTL 4.55e-01 -0.0494 0.0659 0.361 Pro_T L2
ENSG00000111142 METAP2 663312 sc-eQTL 4.77e-01 0.0554 0.0779 0.361 Pro_T L2
ENSG00000111144 LTA4H 93312 sc-eQTL 5.94e-01 -0.0414 0.0776 0.361 Pro_T L2
ENSG00000111145 ELK3 -57543 sc-eQTL 8.21e-01 -0.0213 0.0939 0.361 Pro_T L2
ENSG00000139343 SNRPF 277904 sc-eQTL 1.79e-01 -0.0795 0.059 0.361 Pro_T L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 6.53e-01 0.0387 0.086 0.361 Pro_T L2
ENSG00000188596 CFAP54 -352739 sc-eQTL 4.59e-01 0.0515 0.0695 0.361 Pro_T L2
ENSG00000028203 VEZT 919086 sc-eQTL 5.31e-01 -0.0581 0.0926 0.365 Treg L2
ENSG00000059758 CDK17 -263648 sc-eQTL 3.94e-01 -0.0548 0.0642 0.365 Treg L2
ENSG00000111142 METAP2 663312 sc-eQTL 9.49e-02 0.146 0.0869 0.365 Treg L2
ENSG00000111144 LTA4H 93312 sc-eQTL 5.57e-01 -0.0478 0.0813 0.365 Treg L2
ENSG00000111145 ELK3 -57543 sc-eQTL 2.27e-01 -0.089 0.0735 0.365 Treg L2
ENSG00000136014 USP44 585356 sc-eQTL 5.17e-01 0.0537 0.0827 0.365 Treg L2
ENSG00000139343 SNRPF 277904 sc-eQTL 9.26e-01 0.00792 0.0854 0.365 Treg L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 4.04e-01 0.0795 0.0952 0.365 Treg L2
ENSG00000028203 VEZT 919086 sc-eQTL 3.96e-01 -0.0782 0.092 0.373 cDC L2
ENSG00000059758 CDK17 -263648 sc-eQTL 2.89e-02 0.175 0.0794 0.373 cDC L2
ENSG00000084110 HAL 140467 sc-eQTL 1.89e-01 -0.11 0.0833 0.373 cDC L2
ENSG00000111142 METAP2 663312 sc-eQTL 2.57e-01 -0.114 0.101 0.373 cDC L2
ENSG00000111144 LTA4H 93312 sc-eQTL 9.14e-01 -0.00775 0.0717 0.373 cDC L2
ENSG00000111145 ELK3 -57543 sc-eQTL 3.72e-01 -0.0846 0.0944 0.373 cDC L2
ENSG00000139343 SNRPF 277904 sc-eQTL 7.25e-01 0.0279 0.0792 0.373 cDC L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 6.45e-01 -0.0446 0.0965 0.373 cDC L2
ENSG00000180263 FGD6 919350 sc-eQTL 3.11e-02 0.2 0.0923 0.373 cDC L2
ENSG00000257715 AC007298.1 111509 sc-eQTL 6.11e-01 0.0415 0.0813 0.373 cDC L2
ENSG00000028203 VEZT 919086 sc-eQTL 2.45e-01 0.105 0.0899 0.365 cMono_IL1B L2
ENSG00000059758 CDK17 -263648 sc-eQTL 8.25e-01 0.0152 0.0689 0.365 cMono_IL1B L2
ENSG00000084110 HAL 140467 sc-eQTL 6.26e-01 0.0367 0.0751 0.365 cMono_IL1B L2
ENSG00000111142 METAP2 663312 sc-eQTL 2.66e-01 0.0866 0.0777 0.365 cMono_IL1B L2
ENSG00000111144 LTA4H 93312 sc-eQTL 5.74e-01 -0.0456 0.0811 0.365 cMono_IL1B L2
ENSG00000111145 ELK3 -57543 sc-eQTL 9.99e-01 8.12e-05 0.0625 0.365 cMono_IL1B L2
ENSG00000139343 SNRPF 277904 sc-eQTL 5.94e-01 0.0344 0.0644 0.365 cMono_IL1B L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 9.63e-02 -0.147 0.0882 0.365 cMono_IL1B L2
ENSG00000180263 FGD6 919350 sc-eQTL 8.02e-02 -0.127 0.0722 0.365 cMono_IL1B L2
ENSG00000257715 AC007298.1 111509 sc-eQTL 9.51e-01 -0.00514 0.0829 0.365 cMono_IL1B L2
ENSG00000028203 VEZT 919086 sc-eQTL 1.87e-01 0.12 0.0908 0.365 cMono_S100A L2
ENSG00000059758 CDK17 -263648 sc-eQTL 7.29e-02 -0.139 0.077 0.365 cMono_S100A L2
ENSG00000084110 HAL 140467 sc-eQTL 9.12e-01 -0.00962 0.087 0.365 cMono_S100A L2
ENSG00000111142 METAP2 663312 sc-eQTL 9.93e-02 -0.145 0.0875 0.365 cMono_S100A L2
ENSG00000111144 LTA4H 93312 sc-eQTL 7.17e-02 -0.156 0.0863 0.365 cMono_S100A L2
ENSG00000111145 ELK3 -57543 sc-eQTL 2.02e-01 -0.0904 0.0705 0.365 cMono_S100A L2
ENSG00000139343 SNRPF 277904 sc-eQTL 6.04e-01 -0.0364 0.0699 0.365 cMono_S100A L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 4.50e-01 -0.0714 0.0943 0.365 cMono_S100A L2
ENSG00000180263 FGD6 919350 sc-eQTL 9.37e-01 -0.00669 0.0842 0.365 cMono_S100A L2
ENSG00000257715 AC007298.1 111509 sc-eQTL 8.68e-01 -0.0148 0.0889 0.365 cMono_S100A L2
ENSG00000028203 VEZT 919086 sc-eQTL 3.67e-01 -0.104 0.115 0.376 gdT L2
ENSG00000059758 CDK17 -263648 sc-eQTL 1.48e-02 0.184 0.0747 0.376 gdT L2
ENSG00000074527 NTN4 345680 sc-eQTL 8.52e-01 -0.0164 0.0876 0.376 gdT L2
ENSG00000111142 METAP2 663312 sc-eQTL 3.31e-01 0.107 0.109 0.376 gdT L2
ENSG00000111144 LTA4H 93312 sc-eQTL 7.01e-01 -0.0439 0.114 0.376 gdT L2
ENSG00000111145 ELK3 -57543 sc-eQTL 9.96e-01 0.000518 0.106 0.376 gdT L2
ENSG00000139343 SNRPF 277904 sc-eQTL 1.60e-02 0.244 0.0999 0.376 gdT L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 1.48e-01 -0.163 0.112 0.376 gdT L2
ENSG00000188596 CFAP54 -352739 sc-eQTL 3.92e-01 0.0845 0.0984 0.376 gdT L2
ENSG00000028203 VEZT 919086 sc-eQTL 2.60e-01 -0.114 0.101 0.364 intMono L2
ENSG00000059758 CDK17 -263648 sc-eQTL 3.24e-03 -0.263 0.0881 0.364 intMono L2
ENSG00000084110 HAL 140467 sc-eQTL 3.97e-01 -0.0771 0.0909 0.364 intMono L2
ENSG00000111142 METAP2 663312 sc-eQTL 5.45e-01 -0.0624 0.103 0.364 intMono L2
ENSG00000111144 LTA4H 93312 sc-eQTL 1.23e-01 -0.144 0.0928 0.364 intMono L2
ENSG00000111145 ELK3 -57543 sc-eQTL 1.36e-01 -0.124 0.0827 0.364 intMono L2
ENSG00000139343 SNRPF 277904 sc-eQTL 8.38e-01 0.0182 0.0889 0.364 intMono L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 6.25e-01 0.0451 0.0923 0.364 intMono L2
ENSG00000180263 FGD6 919350 sc-eQTL 6.98e-02 -0.162 0.0888 0.364 intMono L2
ENSG00000257715 AC007298.1 111509 sc-eQTL 6.72e-01 0.0394 0.0929 0.364 intMono L2
ENSG00000028203 VEZT 919086 sc-eQTL 3.22e-04 -0.326 0.089 0.369 ncMono L2
ENSG00000059758 CDK17 -263648 sc-eQTL 4.09e-01 0.0591 0.0715 0.369 ncMono L2
ENSG00000084110 HAL 140467 sc-eQTL 2.40e-01 0.0938 0.0796 0.369 ncMono L2
ENSG00000111142 METAP2 663312 sc-eQTL 1.81e-01 -0.129 0.0962 0.369 ncMono L2
ENSG00000111144 LTA4H 93312 sc-eQTL 4.43e-01 -0.0683 0.089 0.369 ncMono L2
ENSG00000111145 ELK3 -57543 sc-eQTL 2.91e-01 -0.0807 0.0763 0.369 ncMono L2
ENSG00000139343 SNRPF 277904 sc-eQTL 6.52e-02 -0.144 0.0775 0.369 ncMono L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 3.86e-01 -0.072 0.0828 0.369 ncMono L2
ENSG00000180263 FGD6 919350 sc-eQTL 1.79e-01 0.122 0.0904 0.369 ncMono L2
ENSG00000257715 AC007298.1 111509 sc-eQTL 3.91e-01 0.0812 0.0945 0.369 ncMono L2
ENSG00000028203 VEZT 919086 sc-eQTL 3.10e-01 0.103 0.102 0.362 pDC L2
ENSG00000059758 CDK17 -263648 sc-eQTL 8.89e-01 0.0127 0.0913 0.362 pDC L2
ENSG00000084110 HAL 140467 sc-eQTL 8.44e-01 -0.0152 0.0771 0.362 pDC L2
ENSG00000111142 METAP2 663312 sc-eQTL 8.67e-01 -0.0175 0.104 0.362 pDC L2
ENSG00000111144 LTA4H 93312 sc-eQTL 8.38e-01 -0.0177 0.0862 0.362 pDC L2
ENSG00000111145 ELK3 -57543 sc-eQTL 4.94e-01 -0.0723 0.105 0.362 pDC L2
ENSG00000139343 SNRPF 277904 sc-eQTL 8.01e-01 -0.0232 0.092 0.362 pDC L2
ENSG00000139350 NEDD1 -770391 sc-eQTL 9.28e-01 0.00917 0.102 0.362 pDC L2
ENSG00000180263 FGD6 919350 sc-eQTL 5.32e-02 0.172 0.0884 0.362 pDC L2
ENSG00000257715 AC007298.1 111509 sc-eQTL 6.71e-02 0.159 0.0862 0.362 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 919086 sc-eQTL 1.29e-01 -0.138 0.0904 0.365 B_Memory LOneK1K
ENSG00000059758 CDK17 -263648 sc-eQTL 4.32e-01 0.0479 0.0608 0.365 B_Memory LOneK1K
ENSG00000111142 METAP2 663312 sc-eQTL 9.22e-01 0.00833 0.0847 0.365 B_Memory LOneK1K
ENSG00000111144 LTA4H 93312 sc-eQTL 3.76e-01 -0.056 0.0631 0.365 B_Memory LOneK1K
ENSG00000111145 ELK3 -57543 sc-eQTL 8.21e-02 -0.125 0.0718 0.365 B_Memory LOneK1K
ENSG00000136014 USP44 585356 sc-eQTL 5.50e-01 -0.0539 0.09 0.365 B_Memory LOneK1K
ENSG00000139343 SNRPF 277904 sc-eQTL 7.68e-01 -0.0206 0.07 0.365 B_Memory LOneK1K
ENSG00000139350 NEDD1 -770391 sc-eQTL 5.30e-01 -0.0578 0.0918 0.365 B_Memory LOneK1K
ENSG00000180263 FGD6 919350 sc-eQTL 8.22e-01 -0.0182 0.0806 0.365 B_Memory LOneK1K
ENSG00000028203 VEZT 919086 sc-eQTL 2.91e-01 -0.0883 0.0834 0.365 B_Naive LOneK1K
ENSG00000059758 CDK17 -263648 sc-eQTL 2.69e-01 -0.057 0.0514 0.365 B_Naive LOneK1K
ENSG00000111142 METAP2 663312 sc-eQTL 8.76e-01 0.0109 0.0698 0.365 B_Naive LOneK1K
ENSG00000111144 LTA4H 93312 sc-eQTL 2.94e-01 -0.0608 0.0577 0.365 B_Naive LOneK1K
ENSG00000111145 ELK3 -57543 sc-eQTL 3.38e-02 -0.139 0.0652 0.365 B_Naive LOneK1K
ENSG00000136014 USP44 585356 sc-eQTL 1.60e-02 0.193 0.0795 0.365 B_Naive LOneK1K
ENSG00000139343 SNRPF 277904 sc-eQTL 4.85e-01 0.0464 0.0663 0.365 B_Naive LOneK1K
ENSG00000139350 NEDD1 -770391 sc-eQTL 3.97e-01 -0.0744 0.0877 0.365 B_Naive LOneK1K
ENSG00000180263 FGD6 919350 sc-eQTL 5.03e-02 0.173 0.0877 0.365 B_Naive LOneK1K
ENSG00000028203 VEZT 919086 sc-eQTL 6.87e-02 0.15 0.0822 0.365 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -263648 sc-eQTL 5.09e-01 -0.041 0.062 0.365 CD14_Mono LOneK1K
ENSG00000084110 HAL 140467 sc-eQTL 7.25e-01 0.0265 0.0752 0.365 CD14_Mono LOneK1K
ENSG00000111142 METAP2 663312 sc-eQTL 8.36e-01 0.0147 0.0708 0.365 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 93312 sc-eQTL 2.37e-01 -0.0976 0.0823 0.365 CD14_Mono LOneK1K
ENSG00000111145 ELK3 -57543 sc-eQTL 4.26e-01 -0.0476 0.0596 0.365 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 277904 sc-eQTL 8.94e-01 -0.00766 0.0576 0.365 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -770391 sc-eQTL 8.78e-02 -0.154 0.0897 0.365 CD14_Mono LOneK1K
ENSG00000180263 FGD6 919350 sc-eQTL 2.59e-01 -0.0807 0.0714 0.365 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 111509 sc-eQTL 9.56e-01 -0.00463 0.0836 0.365 CD14_Mono LOneK1K
ENSG00000028203 VEZT 919086 sc-eQTL 7.12e-03 -0.252 0.0928 0.366 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -263648 sc-eQTL 1.80e-01 -0.0863 0.0642 0.366 CD16_Mono LOneK1K
ENSG00000084110 HAL 140467 sc-eQTL 7.08e-01 0.0286 0.0762 0.366 CD16_Mono LOneK1K
ENSG00000111142 METAP2 663312 sc-eQTL 2.36e-01 -0.102 0.0862 0.366 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 93312 sc-eQTL 2.57e-01 -0.0958 0.0842 0.366 CD16_Mono LOneK1K
ENSG00000111145 ELK3 -57543 sc-eQTL 7.75e-02 -0.11 0.0621 0.366 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 277904 sc-eQTL 4.54e-02 -0.129 0.0639 0.366 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -770391 sc-eQTL 3.09e-01 -0.084 0.0825 0.366 CD16_Mono LOneK1K
ENSG00000180263 FGD6 919350 sc-eQTL 8.86e-01 -0.0113 0.0792 0.366 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 111509 sc-eQTL 8.27e-01 0.0192 0.0875 0.366 CD16_Mono LOneK1K
ENSG00000028203 VEZT 919086 sc-eQTL 2.85e-01 -0.0914 0.0852 0.366 NK_CD56dim LOneK1K
ENSG00000059758 CDK17 -263648 sc-eQTL 5.92e-01 -0.0241 0.0448 0.366 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 663312 sc-eQTL 2.31e-01 -0.0816 0.068 0.366 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 93312 sc-eQTL 5.71e-01 -0.0442 0.0779 0.366 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 -57543 sc-eQTL 6.53e-01 -0.0321 0.0714 0.366 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 277904 sc-eQTL 7.19e-01 0.022 0.0611 0.366 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -770391 sc-eQTL 5.58e-01 -0.0446 0.0761 0.366 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111145 ELK3 -57543 eQTL 0.024 -0.0404 0.0179 0.0 0.0 0.308
ENSG00000257715 AC007298.1 111509 eQTL 0.0325 0.0425 0.0199 0.0 0.0 0.308

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina