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Genes within 1Mb (chr12:96075584:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 857838 sc-eQTL 7.39e-01 0.0256 0.0765 0.316 B L1
ENSG00000059758 CDK17 -324896 sc-eQTL 1.16e-01 0.0747 0.0473 0.316 B L1
ENSG00000111142 METAP2 602064 sc-eQTL 4.22e-01 0.0542 0.0673 0.316 B L1
ENSG00000111144 LTA4H 32064 sc-eQTL 4.43e-01 0.0454 0.0591 0.316 B L1
ENSG00000111145 ELK3 -118791 sc-eQTL 2.45e-01 0.0733 0.0628 0.316 B L1
ENSG00000136014 USP44 524108 sc-eQTL 4.38e-01 -0.0603 0.0775 0.316 B L1
ENSG00000139343 SNRPF 216656 sc-eQTL 8.09e-01 -0.0138 0.0572 0.316 B L1
ENSG00000139350 NEDD1 -831639 sc-eQTL 5.90e-01 0.0451 0.0835 0.316 B L1
ENSG00000180263 FGD6 858102 sc-eQTL 9.93e-01 0.000716 0.0778 0.316 B L1
ENSG00000028203 VEZT 857838 sc-eQTL 1.99e-01 0.0806 0.0626 0.316 CD4T L1
ENSG00000059758 CDK17 -324896 sc-eQTL 1.49e-01 0.0564 0.0389 0.316 CD4T L1
ENSG00000111142 METAP2 602064 sc-eQTL 8.49e-01 0.0104 0.0546 0.316 CD4T L1
ENSG00000111144 LTA4H 32064 sc-eQTL 5.55e-01 -0.0317 0.0537 0.316 CD4T L1
ENSG00000111145 ELK3 -118791 sc-eQTL 3.25e-01 0.0572 0.058 0.316 CD4T L1
ENSG00000136014 USP44 524108 sc-eQTL 9.07e-01 0.0097 0.083 0.316 CD4T L1
ENSG00000139343 SNRPF 216656 sc-eQTL 7.90e-02 -0.0891 0.0505 0.316 CD4T L1
ENSG00000139350 NEDD1 -831639 sc-eQTL 5.62e-01 0.0364 0.0626 0.316 CD4T L1
ENSG00000028203 VEZT 857838 sc-eQTL 9.58e-01 0.00395 0.0752 0.316 CD8T L1
ENSG00000059758 CDK17 -324896 sc-eQTL 5.27e-01 0.0252 0.0398 0.316 CD8T L1
ENSG00000111142 METAP2 602064 sc-eQTL 6.90e-01 -0.0257 0.0643 0.316 CD8T L1
ENSG00000111144 LTA4H 32064 sc-eQTL 4.99e-01 -0.0289 0.0428 0.316 CD8T L1
ENSG00000111145 ELK3 -118791 sc-eQTL 4.71e-01 -0.0464 0.0644 0.316 CD8T L1
ENSG00000136014 USP44 524108 sc-eQTL 7.19e-01 0.0264 0.0732 0.316 CD8T L1
ENSG00000139343 SNRPF 216656 sc-eQTL 9.16e-01 0.00557 0.0528 0.316 CD8T L1
ENSG00000139350 NEDD1 -831639 sc-eQTL 8.87e-01 0.00997 0.0702 0.316 CD8T L1
ENSG00000028203 VEZT 857838 sc-eQTL 1.06e-01 0.145 0.0895 0.313 DC L1
ENSG00000059758 CDK17 -324896 sc-eQTL 7.14e-01 0.0276 0.0753 0.313 DC L1
ENSG00000084110 HAL 79219 sc-eQTL 8.90e-02 -0.145 0.0851 0.313 DC L1
ENSG00000111142 METAP2 602064 sc-eQTL 2.60e-01 0.106 0.0942 0.313 DC L1
ENSG00000111144 LTA4H 32064 sc-eQTL 1.13e-02 0.176 0.069 0.313 DC L1
ENSG00000111145 ELK3 -118791 sc-eQTL 1.97e-01 0.111 0.0855 0.313 DC L1
ENSG00000139343 SNRPF 216656 sc-eQTL 5.43e-02 0.137 0.0708 0.313 DC L1
ENSG00000139350 NEDD1 -831639 sc-eQTL 4.47e-01 0.0698 0.0915 0.313 DC L1
ENSG00000180263 FGD6 858102 sc-eQTL 8.48e-02 0.146 0.084 0.313 DC L1
ENSG00000257715 AC007298.1 50261 sc-eQTL 3.93e-01 -0.0707 0.0826 0.313 DC L1
ENSG00000028203 VEZT 857838 sc-eQTL 4.02e-01 0.0692 0.0824 0.316 Mono L1
ENSG00000059758 CDK17 -324896 sc-eQTL 7.38e-01 0.0202 0.0604 0.316 Mono L1
ENSG00000084110 HAL 79219 sc-eQTL 9.35e-01 -0.00625 0.0761 0.316 Mono L1
ENSG00000111142 METAP2 602064 sc-eQTL 4.75e-01 0.047 0.0657 0.316 Mono L1
ENSG00000111144 LTA4H 32064 sc-eQTL 3.48e-03 0.249 0.0842 0.316 Mono L1
ENSG00000111145 ELK3 -118791 sc-eQTL 5.18e-01 0.0373 0.0577 0.316 Mono L1
ENSG00000139343 SNRPF 216656 sc-eQTL 2.59e-01 -0.0614 0.0542 0.316 Mono L1
ENSG00000139350 NEDD1 -831639 sc-eQTL 1.94e-01 -0.108 0.0832 0.316 Mono L1
ENSG00000180263 FGD6 858102 sc-eQTL 9.24e-01 0.00665 0.07 0.316 Mono L1
ENSG00000257715 AC007298.1 50261 sc-eQTL 2.85e-02 0.177 0.08 0.316 Mono L1
ENSG00000028203 VEZT 857838 sc-eQTL 8.97e-01 0.0108 0.0829 0.315 NK L1
ENSG00000059758 CDK17 -324896 sc-eQTL 2.27e-01 0.0536 0.0442 0.315 NK L1
ENSG00000111142 METAP2 602064 sc-eQTL 6.02e-01 -0.0343 0.0656 0.315 NK L1
ENSG00000111144 LTA4H 32064 sc-eQTL 5.66e-02 0.143 0.0746 0.315 NK L1
ENSG00000111145 ELK3 -118791 sc-eQTL 1.52e-02 0.172 0.0704 0.315 NK L1
ENSG00000139343 SNRPF 216656 sc-eQTL 6.74e-01 0.0249 0.0592 0.315 NK L1
ENSG00000139350 NEDD1 -831639 sc-eQTL 7.04e-01 0.0285 0.0749 0.315 NK L1
ENSG00000028203 VEZT 857838 sc-eQTL 4.02e-01 -0.0766 0.0913 0.316 Other_T L1
ENSG00000059758 CDK17 -324896 sc-eQTL 2.70e-01 0.041 0.0371 0.316 Other_T L1
ENSG00000074527 NTN4 284432 sc-eQTL 2.56e-01 -0.0781 0.0686 0.316 Other_T L1
ENSG00000111142 METAP2 602064 sc-eQTL 3.97e-01 0.0602 0.0709 0.316 Other_T L1
ENSG00000111144 LTA4H 32064 sc-eQTL 8.97e-02 -0.132 0.0773 0.316 Other_T L1
ENSG00000111145 ELK3 -118791 sc-eQTL 2.63e-01 0.0679 0.0605 0.316 Other_T L1
ENSG00000139343 SNRPF 216656 sc-eQTL 8.48e-01 0.0108 0.0564 0.316 Other_T L1
ENSG00000139350 NEDD1 -831639 sc-eQTL 5.69e-01 0.049 0.0858 0.316 Other_T L1
ENSG00000188596 CFAP54 -413987 sc-eQTL 3.41e-01 -0.0848 0.0888 0.316 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 857838 sc-eQTL 4.47e-01 -0.0786 0.103 0.314 B_Activated L2
ENSG00000059758 CDK17 -324896 sc-eQTL 9.80e-01 0.00218 0.0856 0.314 B_Activated L2
ENSG00000111142 METAP2 602064 sc-eQTL 5.00e-01 -0.0727 0.108 0.314 B_Activated L2
ENSG00000111144 LTA4H 32064 sc-eQTL 6.76e-01 0.0406 0.0969 0.314 B_Activated L2
ENSG00000111145 ELK3 -118791 sc-eQTL 7.32e-01 0.0352 0.103 0.314 B_Activated L2
ENSG00000136014 USP44 524108 sc-eQTL 7.74e-01 0.0227 0.0788 0.314 B_Activated L2
ENSG00000139343 SNRPF 216656 sc-eQTL 9.96e-01 0.000518 0.0967 0.314 B_Activated L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 6.21e-01 -0.0501 0.101 0.314 B_Activated L2
ENSG00000180263 FGD6 858102 sc-eQTL 7.99e-01 0.0186 0.073 0.314 B_Activated L2
ENSG00000028203 VEZT 857838 sc-eQTL 6.24e-01 -0.0446 0.0909 0.315 B_Intermediate L2
ENSG00000059758 CDK17 -324896 sc-eQTL 8.96e-01 0.0096 0.0732 0.315 B_Intermediate L2
ENSG00000111142 METAP2 602064 sc-eQTL 3.23e-01 0.083 0.0838 0.315 B_Intermediate L2
ENSG00000111144 LTA4H 32064 sc-eQTL 9.43e-01 -0.00509 0.0709 0.315 B_Intermediate L2
ENSG00000111145 ELK3 -118791 sc-eQTL 3.80e-01 0.0702 0.0798 0.315 B_Intermediate L2
ENSG00000136014 USP44 524108 sc-eQTL 7.99e-01 -0.024 0.0943 0.315 B_Intermediate L2
ENSG00000139343 SNRPF 216656 sc-eQTL 4.36e-01 0.0621 0.0795 0.315 B_Intermediate L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 6.07e-01 -0.0481 0.0933 0.315 B_Intermediate L2
ENSG00000180263 FGD6 858102 sc-eQTL 9.74e-01 -0.00277 0.0843 0.315 B_Intermediate L2
ENSG00000028203 VEZT 857838 sc-eQTL 5.00e-01 0.0634 0.0938 0.317 B_Memory L2
ENSG00000059758 CDK17 -324896 sc-eQTL 9.44e-01 -0.0049 0.0701 0.317 B_Memory L2
ENSG00000111142 METAP2 602064 sc-eQTL 6.58e-01 0.0403 0.091 0.317 B_Memory L2
ENSG00000111144 LTA4H 32064 sc-eQTL 6.69e-01 -0.0346 0.0808 0.317 B_Memory L2
ENSG00000111145 ELK3 -118791 sc-eQTL 9.51e-01 -0.00491 0.0795 0.317 B_Memory L2
ENSG00000136014 USP44 524108 sc-eQTL 9.09e-02 -0.147 0.0867 0.317 B_Memory L2
ENSG00000139343 SNRPF 216656 sc-eQTL 3.46e-01 -0.0794 0.0841 0.317 B_Memory L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 5.99e-01 -0.049 0.0932 0.317 B_Memory L2
ENSG00000180263 FGD6 858102 sc-eQTL 4.45e-01 0.0664 0.0867 0.317 B_Memory L2
ENSG00000028203 VEZT 857838 sc-eQTL 6.82e-01 -0.037 0.09 0.316 B_Naive1 L2
ENSG00000059758 CDK17 -324896 sc-eQTL 4.26e-01 0.0472 0.0591 0.316 B_Naive1 L2
ENSG00000111142 METAP2 602064 sc-eQTL 7.30e-01 0.0265 0.0766 0.316 B_Naive1 L2
ENSG00000111144 LTA4H 32064 sc-eQTL 6.99e-01 0.024 0.062 0.316 B_Naive1 L2
ENSG00000111145 ELK3 -118791 sc-eQTL 8.93e-01 -0.00989 0.0733 0.316 B_Naive1 L2
ENSG00000136014 USP44 524108 sc-eQTL 2.23e-01 -0.112 0.0918 0.316 B_Naive1 L2
ENSG00000139343 SNRPF 216656 sc-eQTL 9.64e-01 0.00322 0.0713 0.316 B_Naive1 L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 5.92e-02 0.172 0.0907 0.316 B_Naive1 L2
ENSG00000180263 FGD6 858102 sc-eQTL 5.24e-01 -0.0558 0.0875 0.316 B_Naive1 L2
ENSG00000028203 VEZT 857838 sc-eQTL 2.65e-01 0.108 0.0965 0.315 B_Naive2 L2
ENSG00000059758 CDK17 -324896 sc-eQTL 5.11e-01 0.0488 0.074 0.315 B_Naive2 L2
ENSG00000111142 METAP2 602064 sc-eQTL 2.22e-01 0.109 0.0892 0.315 B_Naive2 L2
ENSG00000111144 LTA4H 32064 sc-eQTL 2.89e-01 -0.0745 0.0701 0.315 B_Naive2 L2
ENSG00000111145 ELK3 -118791 sc-eQTL 5.22e-01 0.053 0.0827 0.315 B_Naive2 L2
ENSG00000136014 USP44 524108 sc-eQTL 8.49e-01 -0.0171 0.0895 0.315 B_Naive2 L2
ENSG00000139343 SNRPF 216656 sc-eQTL 7.06e-01 -0.0311 0.0822 0.315 B_Naive2 L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 6.95e-01 0.0384 0.0977 0.315 B_Naive2 L2
ENSG00000180263 FGD6 858102 sc-eQTL 1.28e-01 -0.112 0.0729 0.315 B_Naive2 L2
ENSG00000028203 VEZT 857838 sc-eQTL 5.01e-01 -0.0639 0.0949 0.316 CD4_CTL L2
ENSG00000059758 CDK17 -324896 sc-eQTL 9.43e-01 0.00494 0.0694 0.316 CD4_CTL L2
ENSG00000111142 METAP2 602064 sc-eQTL 4.63e-01 -0.0728 0.0991 0.316 CD4_CTL L2
ENSG00000111144 LTA4H 32064 sc-eQTL 4.42e-01 -0.0752 0.0977 0.316 CD4_CTL L2
ENSG00000111145 ELK3 -118791 sc-eQTL 8.22e-01 0.0223 0.099 0.316 CD4_CTL L2
ENSG00000136014 USP44 524108 sc-eQTL 1.63e-01 0.11 0.0787 0.316 CD4_CTL L2
ENSG00000139343 SNRPF 216656 sc-eQTL 7.14e-01 -0.0316 0.0861 0.316 CD4_CTL L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 1.45e-01 -0.145 0.099 0.316 CD4_CTL L2
ENSG00000028203 VEZT 857838 sc-eQTL 2.62e-01 0.0798 0.071 0.316 CD4_Naive L2
ENSG00000059758 CDK17 -324896 sc-eQTL 1.74e-01 0.0581 0.0426 0.316 CD4_Naive L2
ENSG00000111142 METAP2 602064 sc-eQTL 8.74e-01 -0.00978 0.0617 0.316 CD4_Naive L2
ENSG00000111144 LTA4H 32064 sc-eQTL 6.54e-01 -0.0277 0.0618 0.316 CD4_Naive L2
ENSG00000111145 ELK3 -118791 sc-eQTL 5.44e-01 0.0375 0.0618 0.316 CD4_Naive L2
ENSG00000136014 USP44 524108 sc-eQTL 4.92e-01 0.0597 0.0866 0.316 CD4_Naive L2
ENSG00000139343 SNRPF 216656 sc-eQTL 7.25e-02 -0.0984 0.0545 0.316 CD4_Naive L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 7.26e-01 0.0238 0.0677 0.316 CD4_Naive L2
ENSG00000028203 VEZT 857838 sc-eQTL 2.78e-01 0.0823 0.0757 0.316 CD4_TCM L2
ENSG00000059758 CDK17 -324896 sc-eQTL 7.59e-02 0.0739 0.0414 0.316 CD4_TCM L2
ENSG00000111142 METAP2 602064 sc-eQTL 8.61e-01 0.0124 0.0711 0.316 CD4_TCM L2
ENSG00000111144 LTA4H 32064 sc-eQTL 8.73e-01 -0.0113 0.0708 0.316 CD4_TCM L2
ENSG00000111145 ELK3 -118791 sc-eQTL 6.49e-01 0.0317 0.0697 0.316 CD4_TCM L2
ENSG00000136014 USP44 524108 sc-eQTL 1.05e-01 -0.156 0.0957 0.316 CD4_TCM L2
ENSG00000139343 SNRPF 216656 sc-eQTL 1.72e-01 -0.078 0.0569 0.316 CD4_TCM L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 7.34e-02 0.139 0.0775 0.316 CD4_TCM L2
ENSG00000028203 VEZT 857838 sc-eQTL 5.30e-01 0.0611 0.0971 0.316 CD4_TEM L2
ENSG00000059758 CDK17 -324896 sc-eQTL 5.92e-01 -0.0276 0.0515 0.316 CD4_TEM L2
ENSG00000111142 METAP2 602064 sc-eQTL 6.86e-01 -0.0348 0.0861 0.316 CD4_TEM L2
ENSG00000111144 LTA4H 32064 sc-eQTL 7.08e-01 0.0298 0.0795 0.316 CD4_TEM L2
ENSG00000111145 ELK3 -118791 sc-eQTL 9.32e-01 0.00633 0.0739 0.316 CD4_TEM L2
ENSG00000136014 USP44 524108 sc-eQTL 6.97e-01 0.0354 0.0909 0.316 CD4_TEM L2
ENSG00000139343 SNRPF 216656 sc-eQTL 5.19e-01 0.05 0.0773 0.316 CD4_TEM L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 1.16e-01 -0.144 0.0912 0.316 CD4_TEM L2
ENSG00000028203 VEZT 857838 sc-eQTL 2.86e-01 -0.0913 0.0854 0.316 CD8_CTL L2
ENSG00000059758 CDK17 -324896 sc-eQTL 8.92e-01 0.00673 0.0496 0.316 CD8_CTL L2
ENSG00000111142 METAP2 602064 sc-eQTL 1.11e-01 -0.136 0.0852 0.316 CD8_CTL L2
ENSG00000111144 LTA4H 32064 sc-eQTL 2.82e-01 -0.0962 0.0892 0.316 CD8_CTL L2
ENSG00000111145 ELK3 -118791 sc-eQTL 2.58e-01 0.0922 0.0812 0.316 CD8_CTL L2
ENSG00000136014 USP44 524108 sc-eQTL 9.44e-01 -0.00639 0.0908 0.316 CD8_CTL L2
ENSG00000139343 SNRPF 216656 sc-eQTL 6.38e-01 -0.0353 0.0749 0.316 CD8_CTL L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 1.85e-01 0.111 0.0837 0.316 CD8_CTL L2
ENSG00000028203 VEZT 857838 sc-eQTL 7.28e-01 -0.0305 0.0876 0.316 CD8_Naive L2
ENSG00000059758 CDK17 -324896 sc-eQTL 6.23e-01 0.0294 0.0596 0.316 CD8_Naive L2
ENSG00000111142 METAP2 602064 sc-eQTL 4.76e-01 0.0565 0.0792 0.316 CD8_Naive L2
ENSG00000111144 LTA4H 32064 sc-eQTL 2.37e-01 -0.0845 0.0712 0.316 CD8_Naive L2
ENSG00000111145 ELK3 -118791 sc-eQTL 5.77e-02 -0.143 0.075 0.316 CD8_Naive L2
ENSG00000136014 USP44 524108 sc-eQTL 9.64e-01 -0.0036 0.0794 0.316 CD8_Naive L2
ENSG00000139343 SNRPF 216656 sc-eQTL 4.52e-01 0.0511 0.0679 0.316 CD8_Naive L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 5.00e-02 0.158 0.0802 0.316 CD8_Naive L2
ENSG00000028203 VEZT 857838 sc-eQTL 3.11e-01 0.0988 0.0972 0.31 CD8_TCM L2
ENSG00000059758 CDK17 -324896 sc-eQTL 7.95e-01 0.0172 0.0662 0.31 CD8_TCM L2
ENSG00000111142 METAP2 602064 sc-eQTL 3.65e-01 0.0895 0.0986 0.31 CD8_TCM L2
ENSG00000111144 LTA4H 32064 sc-eQTL 4.19e-01 -0.0787 0.0971 0.31 CD8_TCM L2
ENSG00000111145 ELK3 -118791 sc-eQTL 6.29e-01 0.0399 0.0824 0.31 CD8_TCM L2
ENSG00000136014 USP44 524108 sc-eQTL 5.92e-01 -0.0479 0.0892 0.31 CD8_TCM L2
ENSG00000139343 SNRPF 216656 sc-eQTL 4.50e-01 -0.0717 0.0947 0.31 CD8_TCM L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 4.43e-01 -0.0713 0.0928 0.31 CD8_TCM L2
ENSG00000028203 VEZT 857838 sc-eQTL 2.81e-01 0.106 0.0978 0.317 CD8_TEM L2
ENSG00000059758 CDK17 -324896 sc-eQTL 9.03e-01 -0.00991 0.0811 0.317 CD8_TEM L2
ENSG00000111142 METAP2 602064 sc-eQTL 7.31e-01 0.0328 0.0952 0.317 CD8_TEM L2
ENSG00000111144 LTA4H 32064 sc-eQTL 7.56e-02 0.176 0.0985 0.317 CD8_TEM L2
ENSG00000111145 ELK3 -118791 sc-eQTL 9.09e-01 -0.0112 0.0976 0.317 CD8_TEM L2
ENSG00000136014 USP44 524108 sc-eQTL 3.31e-01 0.0808 0.0829 0.317 CD8_TEM L2
ENSG00000139343 SNRPF 216656 sc-eQTL 7.73e-03 0.24 0.0891 0.317 CD8_TEM L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 5.88e-02 -0.186 0.0976 0.317 CD8_TEM L2
ENSG00000028203 VEZT 857838 sc-eQTL 2.30e-01 -0.113 0.0938 0.316 MAIT L2
ENSG00000059758 CDK17 -324896 sc-eQTL 2.64e-01 0.0602 0.0538 0.316 MAIT L2
ENSG00000074527 NTN4 284432 sc-eQTL 1.82e-01 -0.0969 0.0724 0.316 MAIT L2
ENSG00000111142 METAP2 602064 sc-eQTL 2.89e-01 0.0971 0.0913 0.316 MAIT L2
ENSG00000111144 LTA4H 32064 sc-eQTL 6.43e-01 -0.0386 0.0833 0.316 MAIT L2
ENSG00000111145 ELK3 -118791 sc-eQTL 9.44e-01 -0.00488 0.0699 0.316 MAIT L2
ENSG00000139343 SNRPF 216656 sc-eQTL 9.44e-01 -0.00573 0.0811 0.316 MAIT L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 3.14e-01 0.0916 0.0908 0.316 MAIT L2
ENSG00000188596 CFAP54 -413987 sc-eQTL 3.45e-01 -0.0852 0.09 0.316 MAIT L2
ENSG00000028203 VEZT 857838 sc-eQTL 3.85e-01 0.0831 0.0955 0.318 NK_CD56bright L2
ENSG00000059758 CDK17 -324896 sc-eQTL 6.06e-01 0.0288 0.0557 0.318 NK_CD56bright L2
ENSG00000111142 METAP2 602064 sc-eQTL 8.33e-02 0.163 0.0934 0.318 NK_CD56bright L2
ENSG00000111144 LTA4H 32064 sc-eQTL 5.13e-01 0.054 0.0824 0.318 NK_CD56bright L2
ENSG00000111145 ELK3 -118791 sc-eQTL 1.81e-01 0.117 0.0871 0.318 NK_CD56bright L2
ENSG00000139343 SNRPF 216656 sc-eQTL 2.38e-02 0.206 0.0904 0.318 NK_CD56bright L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 6.79e-02 0.168 0.0916 0.318 NK_CD56bright L2
ENSG00000028203 VEZT 857838 sc-eQTL 2.95e-01 -0.0966 0.092 0.317 NK_CD56dim L2
ENSG00000059758 CDK17 -324896 sc-eQTL 2.14e-01 0.0589 0.0473 0.317 NK_CD56dim L2
ENSG00000111142 METAP2 602064 sc-eQTL 9.18e-01 0.00856 0.0832 0.317 NK_CD56dim L2
ENSG00000111144 LTA4H 32064 sc-eQTL 1.18e-01 0.134 0.0853 0.317 NK_CD56dim L2
ENSG00000111145 ELK3 -118791 sc-eQTL 2.42e-01 0.0889 0.0757 0.317 NK_CD56dim L2
ENSG00000139343 SNRPF 216656 sc-eQTL 3.53e-01 0.0671 0.0722 0.317 NK_CD56dim L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 3.11e-01 -0.0843 0.0831 0.317 NK_CD56dim L2
ENSG00000028203 VEZT 857838 sc-eQTL 2.72e-01 0.114 0.103 0.315 NK_HLA L2
ENSG00000059758 CDK17 -324896 sc-eQTL 7.00e-01 0.0294 0.0764 0.315 NK_HLA L2
ENSG00000111142 METAP2 602064 sc-eQTL 7.99e-01 0.0245 0.0963 0.315 NK_HLA L2
ENSG00000111144 LTA4H 32064 sc-eQTL 5.42e-01 -0.0612 0.1 0.315 NK_HLA L2
ENSG00000111145 ELK3 -118791 sc-eQTL 4.28e-02 0.188 0.092 0.315 NK_HLA L2
ENSG00000139343 SNRPF 216656 sc-eQTL 2.01e-01 0.124 0.0965 0.315 NK_HLA L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 3.27e-01 -0.0899 0.0914 0.315 NK_HLA L2
ENSG00000028203 VEZT 857838 sc-eQTL 7.48e-01 0.0274 0.0854 0.317 NK_cytokine L2
ENSG00000059758 CDK17 -324896 sc-eQTL 3.26e-01 0.0512 0.0521 0.317 NK_cytokine L2
ENSG00000111142 METAP2 602064 sc-eQTL 1.45e-01 -0.126 0.0863 0.317 NK_cytokine L2
ENSG00000111144 LTA4H 32064 sc-eQTL 2.72e-01 0.0968 0.088 0.317 NK_cytokine L2
ENSG00000111145 ELK3 -118791 sc-eQTL 5.11e-01 0.0556 0.0844 0.317 NK_cytokine L2
ENSG00000139343 SNRPF 216656 sc-eQTL 5.51e-01 -0.0427 0.0715 0.317 NK_cytokine L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 8.93e-01 0.0119 0.0885 0.317 NK_cytokine L2
ENSG00000028203 VEZT 857838 sc-eQTL 2.25e-01 0.137 0.112 0.326 PB L2
ENSG00000059758 CDK17 -324896 sc-eQTL 7.56e-01 0.03 0.0964 0.326 PB L2
ENSG00000111142 METAP2 602064 sc-eQTL 1.59e-01 0.159 0.112 0.326 PB L2
ENSG00000111144 LTA4H 32064 sc-eQTL 4.60e-01 0.063 0.0849 0.326 PB L2
ENSG00000111145 ELK3 -118791 sc-eQTL 3.52e-01 0.102 0.109 0.326 PB L2
ENSG00000136014 USP44 524108 sc-eQTL 3.62e-01 0.0922 0.101 0.326 PB L2
ENSG00000139343 SNRPF 216656 sc-eQTL 7.70e-01 0.0312 0.106 0.326 PB L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 9.94e-01 0.000921 0.126 0.326 PB L2
ENSG00000180263 FGD6 858102 sc-eQTL 8.06e-01 0.0222 0.0902 0.326 PB L2
ENSG00000028203 VEZT 857838 sc-eQTL 2.16e-01 -0.112 0.0906 0.317 Pro_T L2
ENSG00000059758 CDK17 -324896 sc-eQTL 6.76e-01 -0.0246 0.0588 0.317 Pro_T L2
ENSG00000074527 NTN4 284432 sc-eQTL 8.86e-01 0.00948 0.0661 0.317 Pro_T L2
ENSG00000111142 METAP2 602064 sc-eQTL 5.21e-01 -0.0501 0.078 0.317 Pro_T L2
ENSG00000111144 LTA4H 32064 sc-eQTL 6.61e-01 -0.0341 0.0777 0.317 Pro_T L2
ENSG00000111145 ELK3 -118791 sc-eQTL 8.86e-02 0.16 0.0933 0.317 Pro_T L2
ENSG00000139343 SNRPF 216656 sc-eQTL 5.92e-01 0.0318 0.0592 0.317 Pro_T L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 3.39e-01 0.0823 0.0859 0.317 Pro_T L2
ENSG00000188596 CFAP54 -413987 sc-eQTL 5.02e-01 -0.0467 0.0696 0.317 Pro_T L2
ENSG00000028203 VEZT 857838 sc-eQTL 3.01e-01 0.0967 0.0934 0.316 Treg L2
ENSG00000059758 CDK17 -324896 sc-eQTL 8.93e-01 -0.00876 0.0649 0.316 Treg L2
ENSG00000111142 METAP2 602064 sc-eQTL 6.21e-01 0.0437 0.0883 0.316 Treg L2
ENSG00000111144 LTA4H 32064 sc-eQTL 4.18e-02 -0.167 0.0814 0.316 Treg L2
ENSG00000111145 ELK3 -118791 sc-eQTL 8.19e-01 -0.0171 0.0745 0.316 Treg L2
ENSG00000136014 USP44 524108 sc-eQTL 8.24e-01 0.0186 0.0837 0.316 Treg L2
ENSG00000139343 SNRPF 216656 sc-eQTL 3.41e-01 -0.0821 0.0861 0.316 Treg L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 1.78e-01 0.13 0.0959 0.316 Treg L2
ENSG00000028203 VEZT 857838 sc-eQTL 1.40e-01 0.135 0.0911 0.32 cDC L2
ENSG00000059758 CDK17 -324896 sc-eQTL 8.89e-01 0.0112 0.08 0.32 cDC L2
ENSG00000084110 HAL 79219 sc-eQTL 3.62e-01 -0.0758 0.083 0.32 cDC L2
ENSG00000111142 METAP2 602064 sc-eQTL 8.21e-01 -0.0228 0.1 0.32 cDC L2
ENSG00000111144 LTA4H 32064 sc-eQTL 1.41e-02 0.174 0.0701 0.32 cDC L2
ENSG00000111145 ELK3 -118791 sc-eQTL 8.85e-01 -0.0136 0.0941 0.32 cDC L2
ENSG00000139343 SNRPF 216656 sc-eQTL 6.59e-01 0.0348 0.0787 0.32 cDC L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 7.70e-01 0.0281 0.0959 0.32 cDC L2
ENSG00000180263 FGD6 858102 sc-eQTL 7.40e-01 0.0309 0.0929 0.32 cDC L2
ENSG00000257715 AC007298.1 50261 sc-eQTL 9.91e-01 0.000899 0.0809 0.32 cDC L2
ENSG00000028203 VEZT 857838 sc-eQTL 3.13e-01 -0.092 0.091 0.316 cMono_IL1B L2
ENSG00000059758 CDK17 -324896 sc-eQTL 9.30e-01 -0.0061 0.0696 0.316 cMono_IL1B L2
ENSG00000084110 HAL 79219 sc-eQTL 4.42e-01 -0.0585 0.0759 0.316 cMono_IL1B L2
ENSG00000111142 METAP2 602064 sc-eQTL 5.28e-01 0.0498 0.0787 0.316 cMono_IL1B L2
ENSG00000111144 LTA4H 32064 sc-eQTL 3.03e-03 0.241 0.0804 0.316 cMono_IL1B L2
ENSG00000111145 ELK3 -118791 sc-eQTL 5.53e-01 0.0375 0.0632 0.316 cMono_IL1B L2
ENSG00000139343 SNRPF 216656 sc-eQTL 8.64e-01 -0.0112 0.0652 0.316 cMono_IL1B L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 5.57e-02 -0.171 0.089 0.316 cMono_IL1B L2
ENSG00000180263 FGD6 858102 sc-eQTL 4.88e-01 -0.051 0.0735 0.316 cMono_IL1B L2
ENSG00000257715 AC007298.1 50261 sc-eQTL 3.66e-02 0.174 0.0829 0.316 cMono_IL1B L2
ENSG00000028203 VEZT 857838 sc-eQTL 3.04e-02 0.198 0.0907 0.316 cMono_S100A L2
ENSG00000059758 CDK17 -324896 sc-eQTL 4.45e-01 -0.0596 0.0779 0.316 cMono_S100A L2
ENSG00000084110 HAL 79219 sc-eQTL 3.71e-01 0.0784 0.0874 0.316 cMono_S100A L2
ENSG00000111142 METAP2 602064 sc-eQTL 3.97e-01 0.075 0.0885 0.316 cMono_S100A L2
ENSG00000111144 LTA4H 32064 sc-eQTL 7.31e-03 0.233 0.086 0.316 cMono_S100A L2
ENSG00000111145 ELK3 -118791 sc-eQTL 7.04e-01 0.0271 0.0712 0.316 cMono_S100A L2
ENSG00000139343 SNRPF 216656 sc-eQTL 6.59e-01 -0.0311 0.0704 0.316 cMono_S100A L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 8.74e-01 -0.0151 0.0951 0.316 cMono_S100A L2
ENSG00000180263 FGD6 858102 sc-eQTL 2.64e-02 0.187 0.0838 0.316 cMono_S100A L2
ENSG00000257715 AC007298.1 50261 sc-eQTL 1.04e-01 0.145 0.0889 0.316 cMono_S100A L2
ENSG00000028203 VEZT 857838 sc-eQTL 3.39e-01 0.112 0.116 0.297 gdT L2
ENSG00000059758 CDK17 -324896 sc-eQTL 8.01e-02 -0.135 0.0765 0.297 gdT L2
ENSG00000074527 NTN4 284432 sc-eQTL 2.21e-01 -0.108 0.0882 0.297 gdT L2
ENSG00000111142 METAP2 602064 sc-eQTL 7.89e-01 0.0297 0.111 0.297 gdT L2
ENSG00000111144 LTA4H 32064 sc-eQTL 5.96e-01 -0.0614 0.116 0.297 gdT L2
ENSG00000111145 ELK3 -118791 sc-eQTL 1.73e-02 0.253 0.105 0.297 gdT L2
ENSG00000139343 SNRPF 216656 sc-eQTL 1.46e-01 -0.15 0.103 0.297 gdT L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 3.65e-01 -0.103 0.114 0.297 gdT L2
ENSG00000188596 CFAP54 -413987 sc-eQTL 4.08e-02 0.203 0.0985 0.297 gdT L2
ENSG00000028203 VEZT 857838 sc-eQTL 5.36e-01 0.0607 0.098 0.318 intMono L2
ENSG00000059758 CDK17 -324896 sc-eQTL 7.79e-02 0.153 0.0866 0.318 intMono L2
ENSG00000084110 HAL 79219 sc-eQTL 9.40e-01 -0.00664 0.0882 0.318 intMono L2
ENSG00000111142 METAP2 602064 sc-eQTL 2.68e-01 0.111 0.0996 0.318 intMono L2
ENSG00000111144 LTA4H 32064 sc-eQTL 1.60e-02 0.217 0.0892 0.318 intMono L2
ENSG00000111145 ELK3 -118791 sc-eQTL 9.95e-01 0.000504 0.0806 0.318 intMono L2
ENSG00000139343 SNRPF 216656 sc-eQTL 4.56e-02 -0.172 0.0853 0.318 intMono L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 6.12e-01 -0.0454 0.0895 0.318 intMono L2
ENSG00000180263 FGD6 858102 sc-eQTL 7.81e-01 0.0242 0.0868 0.318 intMono L2
ENSG00000257715 AC007298.1 50261 sc-eQTL 7.12e-01 -0.0332 0.09 0.318 intMono L2
ENSG00000028203 VEZT 857838 sc-eQTL 1.41e-01 0.135 0.0913 0.317 ncMono L2
ENSG00000059758 CDK17 -324896 sc-eQTL 8.83e-01 0.0105 0.0714 0.317 ncMono L2
ENSG00000084110 HAL 79219 sc-eQTL 9.13e-01 0.00868 0.0797 0.317 ncMono L2
ENSG00000111142 METAP2 602064 sc-eQTL 2.97e-01 0.1 0.0961 0.317 ncMono L2
ENSG00000111144 LTA4H 32064 sc-eQTL 3.71e-01 0.0796 0.0887 0.317 ncMono L2
ENSG00000111145 ELK3 -118791 sc-eQTL 7.98e-02 0.133 0.0757 0.317 ncMono L2
ENSG00000139343 SNRPF 216656 sc-eQTL 9.73e-01 -0.00268 0.078 0.317 ncMono L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 4.30e-01 -0.0654 0.0827 0.317 ncMono L2
ENSG00000180263 FGD6 858102 sc-eQTL 7.69e-01 -0.0267 0.0906 0.317 ncMono L2
ENSG00000257715 AC007298.1 50261 sc-eQTL 6.36e-01 0.0448 0.0944 0.317 ncMono L2
ENSG00000028203 VEZT 857838 sc-eQTL 1.49e-01 0.153 0.106 0.316 pDC L2
ENSG00000059758 CDK17 -324896 sc-eQTL 3.87e-01 0.0825 0.0951 0.316 pDC L2
ENSG00000084110 HAL 79219 sc-eQTL 8.32e-01 -0.0171 0.0805 0.316 pDC L2
ENSG00000111142 METAP2 602064 sc-eQTL 7.69e-02 0.192 0.108 0.316 pDC L2
ENSG00000111144 LTA4H 32064 sc-eQTL 7.17e-02 0.162 0.0891 0.316 pDC L2
ENSG00000111145 ELK3 -118791 sc-eQTL 2.01e-01 0.141 0.11 0.316 pDC L2
ENSG00000139343 SNRPF 216656 sc-eQTL 1.01e-01 0.157 0.0953 0.316 pDC L2
ENSG00000139350 NEDD1 -831639 sc-eQTL 2.90e-01 0.112 0.106 0.316 pDC L2
ENSG00000180263 FGD6 858102 sc-eQTL 3.74e-01 0.0831 0.0932 0.316 pDC L2
ENSG00000257715 AC007298.1 50261 sc-eQTL 6.77e-01 0.038 0.0909 0.316 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 857838 sc-eQTL 7.19e-01 -0.0328 0.0912 0.316 B_Memory LOneK1K
ENSG00000059758 CDK17 -324896 sc-eQTL 8.92e-01 0.00828 0.0611 0.316 B_Memory LOneK1K
ENSG00000111142 METAP2 602064 sc-eQTL 1.82e-01 0.113 0.0846 0.316 B_Memory LOneK1K
ENSG00000111144 LTA4H 32064 sc-eQTL 8.22e-01 0.0143 0.0635 0.316 B_Memory LOneK1K
ENSG00000111145 ELK3 -118791 sc-eQTL 7.55e-01 0.0227 0.0725 0.316 B_Memory LOneK1K
ENSG00000136014 USP44 524108 sc-eQTL 4.29e-01 -0.0716 0.0903 0.316 B_Memory LOneK1K
ENSG00000139343 SNRPF 216656 sc-eQTL 9.96e-01 0.000395 0.0703 0.316 B_Memory LOneK1K
ENSG00000139350 NEDD1 -831639 sc-eQTL 4.23e-01 -0.074 0.0921 0.316 B_Memory LOneK1K
ENSG00000180263 FGD6 858102 sc-eQTL 7.22e-01 0.0288 0.0809 0.316 B_Memory LOneK1K
ENSG00000028203 VEZT 857838 sc-eQTL 6.26e-01 0.0421 0.0863 0.316 B_Naive LOneK1K
ENSG00000059758 CDK17 -324896 sc-eQTL 1.90e-01 0.0697 0.053 0.316 B_Naive LOneK1K
ENSG00000111142 METAP2 602064 sc-eQTL 4.77e-01 0.0512 0.0719 0.316 B_Naive LOneK1K
ENSG00000111144 LTA4H 32064 sc-eQTL 7.59e-01 0.0183 0.0597 0.316 B_Naive LOneK1K
ENSG00000111145 ELK3 -118791 sc-eQTL 6.78e-01 0.0283 0.068 0.316 B_Naive LOneK1K
ENSG00000136014 USP44 524108 sc-eQTL 3.73e-01 -0.0741 0.083 0.316 B_Naive LOneK1K
ENSG00000139343 SNRPF 216656 sc-eQTL 9.70e-01 -0.00256 0.0685 0.316 B_Naive LOneK1K
ENSG00000139350 NEDD1 -831639 sc-eQTL 1.18e-01 0.141 0.0901 0.316 B_Naive LOneK1K
ENSG00000180263 FGD6 858102 sc-eQTL 3.05e-01 -0.0937 0.0911 0.316 B_Naive LOneK1K
ENSG00000028203 VEZT 857838 sc-eQTL 9.27e-01 0.00772 0.0841 0.316 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -324896 sc-eQTL 6.63e-01 -0.0275 0.063 0.316 CD14_Mono LOneK1K
ENSG00000084110 HAL 79219 sc-eQTL 7.91e-01 0.0202 0.0763 0.316 CD14_Mono LOneK1K
ENSG00000111142 METAP2 602064 sc-eQTL 5.37e-01 0.0445 0.0718 0.316 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 32064 sc-eQTL 1.32e-03 0.266 0.0818 0.316 CD14_Mono LOneK1K
ENSG00000111145 ELK3 -118791 sc-eQTL 6.45e-01 0.0279 0.0605 0.316 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 216656 sc-eQTL 5.01e-01 -0.0394 0.0584 0.316 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -831639 sc-eQTL 1.35e-01 -0.137 0.0912 0.316 CD14_Mono LOneK1K
ENSG00000180263 FGD6 858102 sc-eQTL 4.79e-01 0.0515 0.0726 0.316 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 50261 sc-eQTL 1.49e-02 0.205 0.0837 0.316 CD14_Mono LOneK1K
ENSG00000028203 VEZT 857838 sc-eQTL 4.89e-02 0.185 0.0934 0.315 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -324896 sc-eQTL 5.25e-01 0.041 0.0643 0.315 CD16_Mono LOneK1K
ENSG00000084110 HAL 79219 sc-eQTL 7.47e-01 -0.0246 0.0761 0.315 CD16_Mono LOneK1K
ENSG00000111142 METAP2 602064 sc-eQTL 4.72e-01 0.0622 0.0863 0.315 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 32064 sc-eQTL 7.45e-02 0.15 0.0838 0.315 CD16_Mono LOneK1K
ENSG00000111145 ELK3 -118791 sc-eQTL 4.14e-01 0.051 0.0623 0.315 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 216656 sc-eQTL 3.38e-02 -0.136 0.0637 0.315 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -831639 sc-eQTL 3.21e-01 -0.0819 0.0824 0.315 CD16_Mono LOneK1K
ENSG00000180263 FGD6 858102 sc-eQTL 9.12e-01 0.00877 0.0791 0.315 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 50261 sc-eQTL 9.27e-01 -0.00805 0.0874 0.315 CD16_Mono LOneK1K
ENSG00000028203 VEZT 857838 sc-eQTL 6.70e-01 -0.0364 0.0852 0.317 NK_CD56dim LOneK1K
ENSG00000059758 CDK17 -324896 sc-eQTL 1.84e-01 0.0595 0.0446 0.317 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 602064 sc-eQTL 3.24e-01 -0.0672 0.0679 0.317 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 32064 sc-eQTL 1.21e-01 0.12 0.0774 0.317 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 -118791 sc-eQTL 5.28e-02 0.137 0.0706 0.317 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 216656 sc-eQTL 7.05e-01 0.0231 0.0609 0.317 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -831639 sc-eQTL 7.05e-01 -0.0288 0.076 0.317 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000028203 \N 857838 2.61e-07 1.16e-07 3.69e-08 1.82e-07 9.02e-08 9.71e-08 1.38e-07 5.33e-08 1.4e-07 4.4e-08 1.56e-07 8.36e-08 1.41e-07 6.38e-08 5.53e-08 7.26e-08 4.48e-08 1.14e-07 5.19e-08 4.03e-08 1.04e-07 1.26e-07 1.26e-07 4.26e-08 1.33e-07 1.19e-07 1.11e-07 9.15e-08 1.02e-07 1.12e-07 9.73e-08 3.96e-08 3.09e-08 8.65e-08 8.76e-08 4.02e-08 5.03e-08 9.62e-08 7.23e-08 3.18e-08 4.02e-08 1.35e-07 4.33e-08 1.61e-08 7.26e-08 1.83e-08 1.25e-07 3.83e-09 4.79e-08