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Genes within 1Mb (chr12:95662051:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT 444305 sc-eQTL 3.66e-01 0.202 0.222 0.05 NK_HLA L2
ENSG00000059758 CDK17 -738429 sc-eQTL 8.41e-01 -0.0331 0.165 0.05 NK_HLA L2
ENSG00000111142 METAP2 188531 sc-eQTL 3.23e-01 -0.205 0.207 0.05 NK_HLA L2
ENSG00000111144 LTA4H -381469 sc-eQTL 1.59e-01 0.304 0.215 0.05 NK_HLA L2
ENSG00000111145 ELK3 -532324 sc-eQTL 1.75e-01 -0.272 0.2 0.05 NK_HLA L2
ENSG00000120798 NR2C1 588423 sc-eQTL 8.11e-01 -0.0526 0.219 0.05 NK_HLA L2
ENSG00000139343 SNRPF -196877 sc-eQTL 6.91e-01 -0.0832 0.209 0.05 NK_HLA L2
ENSG00000184752 NDUFA12 658303 sc-eQTL 1.42e-01 0.271 0.184 0.05 NK_HLA L2
ENSG00000028203 VEZT 444305 sc-eQTL 8.61e-01 -0.0346 0.197 0.051 cDC L2
ENSG00000059758 CDK17 -738429 sc-eQTL 1.96e-02 0.399 0.17 0.051 cDC L2
ENSG00000084110 HAL -334314 sc-eQTL 1.42e-01 -0.262 0.178 0.051 cDC L2
ENSG00000111142 METAP2 188531 sc-eQTL 4.72e-01 -0.156 0.216 0.051 cDC L2
ENSG00000111144 LTA4H -381469 sc-eQTL 8.64e-01 -0.0262 0.153 0.051 cDC L2
ENSG00000111145 ELK3 -532324 sc-eQTL 2.31e-01 -0.243 0.202 0.051 cDC L2
ENSG00000120798 NR2C1 588423 sc-eQTL 3.08e-01 0.212 0.207 0.051 cDC L2
ENSG00000139343 SNRPF -196877 sc-eQTL 6.87e-02 0.307 0.168 0.051 cDC L2
ENSG00000180263 FGD6 444569 sc-eQTL 4.06e-01 -0.166 0.199 0.051 cDC L2
ENSG00000184752 NDUFA12 658303 sc-eQTL 3.83e-01 0.148 0.17 0.051 cDC L2
ENSG00000257715 AC007298.1 -363272 sc-eQTL 5.31e-01 -0.109 0.174 0.051 cDC L2
ENSG00000028203 VEZT 444305 sc-eQTL 3.06e-01 -0.223 0.218 0.056 pDC L2
ENSG00000059758 CDK17 -738429 sc-eQTL 8.57e-01 -0.0352 0.195 0.056 pDC L2
ENSG00000084110 HAL -334314 sc-eQTL 6.96e-01 -0.0646 0.165 0.056 pDC L2
ENSG00000111142 METAP2 188531 sc-eQTL 7.28e-01 -0.0776 0.223 0.056 pDC L2
ENSG00000111144 LTA4H -381469 sc-eQTL 2.30e-01 0.222 0.184 0.056 pDC L2
ENSG00000111145 ELK3 -532324 sc-eQTL 3.34e-01 0.218 0.225 0.056 pDC L2
ENSG00000120798 NR2C1 588423 sc-eQTL 3.09e-01 -0.224 0.22 0.056 pDC L2
ENSG00000139343 SNRPF -196877 sc-eQTL 6.99e-01 -0.0764 0.197 0.056 pDC L2
ENSG00000180263 FGD6 444569 sc-eQTL 9.04e-01 -0.0232 0.192 0.056 pDC L2
ENSG00000184752 NDUFA12 658303 sc-eQTL 6.58e-01 -0.0837 0.189 0.056 pDC L2
ENSG00000257715 AC007298.1 -363272 sc-eQTL 6.55e-01 -0.0834 0.186 0.056 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000120798 NR2C1 588423 eQTL 0.049 0.0512 0.026 0.00104 0.0 0.0486
ENSG00000139344 AMDHD1 -281280 eQTL 0.0225 -0.169 0.074 0.0 0.0 0.0486
ENSG00000257878 AC007298.2 -334470 eQTL 0.0337 0.0552 0.0259 0.0 0.0 0.0486

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina