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Genes within 1Mb (chr12:94853068:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -364678 sc-eQTL 7.05e-02 -0.262 0.144 0.936 B L1
ENSG00000057704 TMCC3 202511 sc-eQTL 3.99e-01 -0.144 0.17 0.936 B L1
ENSG00000111142 METAP2 -620452 sc-eQTL 8.70e-01 -0.0209 0.128 0.936 B L1
ENSG00000120798 NR2C1 -220560 sc-eQTL 9.58e-01 -0.00851 0.162 0.936 B L1
ENSG00000136014 USP44 -698408 sc-eQTL 8.17e-01 0.0342 0.147 0.936 B L1
ENSG00000136040 PLXNC1 704491 sc-eQTL 2.11e-01 -0.121 0.0965 0.936 B L1
ENSG00000173588 CEP83 393080 sc-eQTL 4.60e-01 0.0903 0.122 0.936 B L1
ENSG00000180263 FGD6 -364414 sc-eQTL 2.89e-01 0.157 0.147 0.936 B L1
ENSG00000184752 NDUFA12 -150680 sc-eQTL 4.97e-01 0.0478 0.0704 0.936 B L1
ENSG00000028203 VEZT -364678 sc-eQTL 9.98e-01 -0.00024 0.121 0.936 CD4T L1
ENSG00000111142 METAP2 -620452 sc-eQTL 8.02e-01 -0.0265 0.105 0.936 CD4T L1
ENSG00000120798 NR2C1 -220560 sc-eQTL 1.22e-01 0.182 0.117 0.936 CD4T L1
ENSG00000136014 USP44 -698408 sc-eQTL 5.30e-01 -0.101 0.16 0.936 CD4T L1
ENSG00000136040 PLXNC1 704491 sc-eQTL 2.44e-01 0.12 0.103 0.936 CD4T L1
ENSG00000173588 CEP83 393080 sc-eQTL 4.95e-01 -0.0738 0.108 0.936 CD4T L1
ENSG00000184752 NDUFA12 -150680 sc-eQTL 3.68e-01 0.102 0.113 0.936 CD4T L1
ENSG00000028203 VEZT -364678 sc-eQTL 2.75e-02 -0.318 0.143 0.936 CD8T L1
ENSG00000057704 TMCC3 202511 sc-eQTL 1.74e-01 0.132 0.097 0.936 CD8T L1
ENSG00000111142 METAP2 -620452 sc-eQTL 8.41e-01 0.0248 0.124 0.936 CD8T L1
ENSG00000120798 NR2C1 -220560 sc-eQTL 5.69e-01 -0.09 0.158 0.936 CD8T L1
ENSG00000136014 USP44 -698408 sc-eQTL 5.34e-01 -0.0879 0.141 0.936 CD8T L1
ENSG00000136040 PLXNC1 704491 sc-eQTL 7.21e-01 -0.048 0.134 0.936 CD8T L1
ENSG00000173588 CEP83 393080 sc-eQTL 8.78e-01 -0.0193 0.125 0.936 CD8T L1
ENSG00000184752 NDUFA12 -150680 sc-eQTL 7.23e-01 0.0365 0.103 0.936 CD8T L1
ENSG00000028203 VEZT -364678 sc-eQTL 5.33e-01 0.104 0.167 0.935 DC L1
ENSG00000057704 TMCC3 202511 sc-eQTL 3.48e-01 0.166 0.177 0.935 DC L1
ENSG00000111142 METAP2 -620452 sc-eQTL 7.39e-01 0.0585 0.175 0.935 DC L1
ENSG00000120798 NR2C1 -220560 sc-eQTL 8.50e-01 0.0322 0.17 0.935 DC L1
ENSG00000136040 PLXNC1 704491 sc-eQTL 5.29e-01 0.0999 0.158 0.935 DC L1
ENSG00000173588 CEP83 393080 sc-eQTL 4.64e-01 0.104 0.141 0.935 DC L1
ENSG00000180263 FGD6 -364414 sc-eQTL 4.32e-01 -0.124 0.157 0.935 DC L1
ENSG00000184752 NDUFA12 -150680 sc-eQTL 2.84e-01 0.142 0.132 0.935 DC L1
ENSG00000028203 VEZT -364678 sc-eQTL 4.96e-01 -0.11 0.16 0.936 Mono L1
ENSG00000057704 TMCC3 202511 sc-eQTL 2.06e-01 0.158 0.124 0.936 Mono L1
ENSG00000111142 METAP2 -620452 sc-eQTL 5.33e-01 0.0798 0.128 0.936 Mono L1
ENSG00000120798 NR2C1 -220560 sc-eQTL 7.28e-01 -0.0532 0.152 0.936 Mono L1
ENSG00000136040 PLXNC1 704491 sc-eQTL 1.09e-01 0.166 0.103 0.936 Mono L1
ENSG00000173588 CEP83 393080 sc-eQTL 2.83e-02 -0.334 0.151 0.936 Mono L1
ENSG00000180263 FGD6 -364414 sc-eQTL 8.89e-02 -0.231 0.135 0.936 Mono L1
ENSG00000184752 NDUFA12 -150680 sc-eQTL 8.55e-01 -0.0179 0.0979 0.936 Mono L1
ENSG00000028203 VEZT -364678 sc-eQTL 5.00e-01 0.107 0.159 0.936 NK L1
ENSG00000057704 TMCC3 202511 sc-eQTL 1.88e-02 0.351 0.148 0.936 NK L1
ENSG00000111142 METAP2 -620452 sc-eQTL 4.04e-01 0.105 0.126 0.936 NK L1
ENSG00000120798 NR2C1 -220560 sc-eQTL 3.38e-01 0.143 0.149 0.936 NK L1
ENSG00000136040 PLXNC1 704491 sc-eQTL 3.87e-01 -0.106 0.123 0.936 NK L1
ENSG00000173588 CEP83 393080 sc-eQTL 3.68e-01 0.126 0.139 0.936 NK L1
ENSG00000184752 NDUFA12 -150680 sc-eQTL 2.86e-01 0.11 0.103 0.936 NK L1
ENSG00000028203 VEZT -364678 sc-eQTL 3.65e-02 -0.364 0.173 0.936 Other_T L1
ENSG00000057704 TMCC3 202511 sc-eQTL 5.93e-01 0.0794 0.149 0.936 Other_T L1
ENSG00000074527 NTN4 -938084 sc-eQTL 1.77e-02 0.31 0.13 0.936 Other_T L1
ENSG00000111142 METAP2 -620452 sc-eQTL 5.15e-02 0.264 0.135 0.936 Other_T L1
ENSG00000120798 NR2C1 -220560 sc-eQTL 6.37e-01 -0.08 0.169 0.936 Other_T L1
ENSG00000136040 PLXNC1 704491 sc-eQTL 3.14e-01 0.138 0.137 0.936 Other_T L1
ENSG00000173588 CEP83 393080 sc-eQTL 6.79e-01 -0.0641 0.155 0.936 Other_T L1
ENSG00000184752 NDUFA12 -150680 sc-eQTL 8.50e-01 0.0163 0.0861 0.936 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -364678 sc-eQTL 9.92e-01 -0.00211 0.206 0.936 B_Activated L2
ENSG00000057704 TMCC3 202511 sc-eQTL 1.36e-01 -0.261 0.174 0.936 B_Activated L2
ENSG00000111142 METAP2 -620452 sc-eQTL 8.19e-01 0.0492 0.214 0.936 B_Activated L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 3.90e-01 -0.177 0.205 0.936 B_Activated L2
ENSG00000136014 USP44 -698408 sc-eQTL 6.59e-01 0.0694 0.157 0.936 B_Activated L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 3.62e-01 0.151 0.165 0.936 B_Activated L2
ENSG00000173588 CEP83 393080 sc-eQTL 1.55e-01 0.293 0.205 0.936 B_Activated L2
ENSG00000180263 FGD6 -364414 sc-eQTL 2.66e-03 -0.432 0.142 0.936 B_Activated L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 4.67e-01 -0.132 0.182 0.936 B_Activated L2
ENSG00000028203 VEZT -364678 sc-eQTL 2.13e-02 -0.394 0.17 0.936 B_Intermediate L2
ENSG00000057704 TMCC3 202511 sc-eQTL 9.36e-01 0.0139 0.174 0.936 B_Intermediate L2
ENSG00000111142 METAP2 -620452 sc-eQTL 4.42e-01 0.122 0.159 0.936 B_Intermediate L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 6.15e-01 -0.0876 0.174 0.936 B_Intermediate L2
ENSG00000136014 USP44 -698408 sc-eQTL 9.97e-01 0.000691 0.178 0.936 B_Intermediate L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 6.18e-01 -0.0732 0.146 0.936 B_Intermediate L2
ENSG00000173588 CEP83 393080 sc-eQTL 8.54e-01 -0.03 0.162 0.936 B_Intermediate L2
ENSG00000180263 FGD6 -364414 sc-eQTL 3.22e-01 0.158 0.159 0.936 B_Intermediate L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 1.42e-01 0.193 0.131 0.936 B_Intermediate L2
ENSG00000028203 VEZT -364678 sc-eQTL 6.46e-01 -0.0825 0.179 0.935 B_Memory L2
ENSG00000057704 TMCC3 202511 sc-eQTL 1.94e-01 0.236 0.181 0.935 B_Memory L2
ENSG00000111142 METAP2 -620452 sc-eQTL 4.26e-01 -0.138 0.174 0.935 B_Memory L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 5.41e-01 -0.114 0.187 0.935 B_Memory L2
ENSG00000136014 USP44 -698408 sc-eQTL 6.28e-01 0.0808 0.166 0.935 B_Memory L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 8.85e-01 -0.0204 0.141 0.935 B_Memory L2
ENSG00000173588 CEP83 393080 sc-eQTL 3.58e-01 0.151 0.164 0.935 B_Memory L2
ENSG00000180263 FGD6 -364414 sc-eQTL 3.86e-01 0.144 0.165 0.935 B_Memory L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 1.34e-01 0.2 0.133 0.935 B_Memory L2
ENSG00000028203 VEZT -364678 sc-eQTL 1.07e-01 -0.275 0.17 0.936 B_Naive1 L2
ENSG00000057704 TMCC3 202511 sc-eQTL 3.62e-01 -0.158 0.173 0.936 B_Naive1 L2
ENSG00000111142 METAP2 -620452 sc-eQTL 2.66e-01 0.162 0.145 0.936 B_Naive1 L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 2.27e-01 0.214 0.177 0.936 B_Naive1 L2
ENSG00000136014 USP44 -698408 sc-eQTL 4.52e-01 -0.132 0.175 0.936 B_Naive1 L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 1.68e-01 -0.202 0.146 0.936 B_Naive1 L2
ENSG00000173588 CEP83 393080 sc-eQTL 9.95e-01 -0.000867 0.152 0.936 B_Naive1 L2
ENSG00000180263 FGD6 -364414 sc-eQTL 9.79e-01 -0.00439 0.166 0.936 B_Naive1 L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 7.23e-01 -0.0344 0.0968 0.936 B_Naive1 L2
ENSG00000028203 VEZT -364678 sc-eQTL 4.88e-01 -0.129 0.185 0.936 B_Naive2 L2
ENSG00000057704 TMCC3 202511 sc-eQTL 1.67e-01 0.234 0.169 0.936 B_Naive2 L2
ENSG00000111142 METAP2 -620452 sc-eQTL 1.54e-01 -0.244 0.171 0.936 B_Naive2 L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 1.27e-01 -0.286 0.187 0.936 B_Naive2 L2
ENSG00000136014 USP44 -698408 sc-eQTL 8.62e-01 0.0299 0.171 0.936 B_Naive2 L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 2.34e-01 -0.189 0.158 0.936 B_Naive2 L2
ENSG00000173588 CEP83 393080 sc-eQTL 7.21e-01 0.0598 0.167 0.936 B_Naive2 L2
ENSG00000180263 FGD6 -364414 sc-eQTL 1.81e-01 0.188 0.14 0.936 B_Naive2 L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 7.85e-01 0.0378 0.138 0.936 B_Naive2 L2
ENSG00000028203 VEZT -364678 sc-eQTL 4.57e-01 -0.135 0.181 0.939 CD4_CTL L2
ENSG00000111142 METAP2 -620452 sc-eQTL 6.25e-01 -0.0924 0.189 0.939 CD4_CTL L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 1.92e-01 0.247 0.189 0.939 CD4_CTL L2
ENSG00000136014 USP44 -698408 sc-eQTL 3.69e-01 -0.135 0.15 0.939 CD4_CTL L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 6.08e-01 0.087 0.169 0.939 CD4_CTL L2
ENSG00000173588 CEP83 393080 sc-eQTL 2.29e-01 -0.208 0.172 0.939 CD4_CTL L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 9.60e-01 0.0079 0.156 0.939 CD4_CTL L2
ENSG00000028203 VEZT -364678 sc-eQTL 4.66e-01 0.101 0.139 0.936 CD4_Naive L2
ENSG00000111142 METAP2 -620452 sc-eQTL 6.09e-01 0.0615 0.12 0.936 CD4_Naive L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 1.13e-01 0.232 0.146 0.936 CD4_Naive L2
ENSG00000136014 USP44 -698408 sc-eQTL 6.35e-01 -0.0803 0.169 0.936 CD4_Naive L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 1.94e-01 0.149 0.115 0.936 CD4_Naive L2
ENSG00000173588 CEP83 393080 sc-eQTL 6.39e-01 -0.0584 0.124 0.936 CD4_Naive L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 5.43e-01 0.0651 0.107 0.936 CD4_Naive L2
ENSG00000028203 VEZT -364678 sc-eQTL 9.18e-02 -0.244 0.144 0.936 CD4_TCM L2
ENSG00000111142 METAP2 -620452 sc-eQTL 4.92e-01 -0.0934 0.136 0.936 CD4_TCM L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 1.74e-01 0.215 0.158 0.936 CD4_TCM L2
ENSG00000136014 USP44 -698408 sc-eQTL 7.76e-01 -0.0524 0.184 0.936 CD4_TCM L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 8.36e-01 0.028 0.135 0.936 CD4_TCM L2
ENSG00000173588 CEP83 393080 sc-eQTL 7.99e-01 -0.0367 0.144 0.936 CD4_TCM L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 8.32e-01 0.0264 0.124 0.936 CD4_TCM L2
ENSG00000028203 VEZT -364678 sc-eQTL 2.86e-01 -0.199 0.186 0.936 CD4_TEM L2
ENSG00000111142 METAP2 -620452 sc-eQTL 6.91e-01 -0.0657 0.165 0.936 CD4_TEM L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 6.97e-01 -0.0677 0.174 0.936 CD4_TEM L2
ENSG00000136014 USP44 -698408 sc-eQTL 1.15e-01 0.275 0.173 0.936 CD4_TEM L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 8.83e-01 -0.022 0.149 0.936 CD4_TEM L2
ENSG00000173588 CEP83 393080 sc-eQTL 6.85e-01 -0.0678 0.167 0.936 CD4_TEM L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 2.88e-01 0.161 0.151 0.936 CD4_TEM L2
ENSG00000028203 VEZT -364678 sc-eQTL 1.50e-02 -0.397 0.162 0.936 CD8_CTL L2
ENSG00000057704 TMCC3 202511 sc-eQTL 1.06e-01 0.233 0.144 0.936 CD8_CTL L2
ENSG00000111142 METAP2 -620452 sc-eQTL 7.67e-01 0.0487 0.164 0.936 CD8_CTL L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 9.90e-01 -0.00226 0.181 0.936 CD8_CTL L2
ENSG00000136014 USP44 -698408 sc-eQTL 3.14e-01 -0.175 0.173 0.936 CD8_CTL L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 9.18e-01 0.0154 0.148 0.936 CD8_CTL L2
ENSG00000173588 CEP83 393080 sc-eQTL 6.70e-01 -0.0697 0.163 0.936 CD8_CTL L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 7.91e-01 -0.0341 0.129 0.936 CD8_CTL L2
ENSG00000028203 VEZT -364678 sc-eQTL 1.11e-01 -0.267 0.167 0.936 CD8_Naive L2
ENSG00000057704 TMCC3 202511 sc-eQTL 3.39e-01 0.126 0.131 0.936 CD8_Naive L2
ENSG00000111142 METAP2 -620452 sc-eQTL 9.03e-01 -0.0185 0.152 0.936 CD8_Naive L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 1.26e-01 -0.257 0.168 0.936 CD8_Naive L2
ENSG00000136014 USP44 -698408 sc-eQTL 6.73e-01 0.0642 0.152 0.936 CD8_Naive L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 6.06e-01 0.0796 0.154 0.936 CD8_Naive L2
ENSG00000173588 CEP83 393080 sc-eQTL 4.39e-01 -0.115 0.148 0.936 CD8_Naive L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 6.30e-01 0.0593 0.123 0.936 CD8_Naive L2
ENSG00000028203 VEZT -364678 sc-eQTL 1.39e-01 -0.261 0.175 0.933 CD8_TCM L2
ENSG00000057704 TMCC3 202511 sc-eQTL 8.70e-01 0.0223 0.136 0.933 CD8_TCM L2
ENSG00000111142 METAP2 -620452 sc-eQTL 7.31e-01 -0.0616 0.179 0.933 CD8_TCM L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 3.81e-01 0.158 0.18 0.933 CD8_TCM L2
ENSG00000136014 USP44 -698408 sc-eQTL 6.81e-01 -0.0666 0.161 0.933 CD8_TCM L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 1.40e-01 -0.251 0.169 0.933 CD8_TCM L2
ENSG00000173588 CEP83 393080 sc-eQTL 2.57e-01 0.198 0.174 0.933 CD8_TCM L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 3.18e-01 -0.141 0.14 0.933 CD8_TCM L2
ENSG00000028203 VEZT -364678 sc-eQTL 7.50e-01 -0.0603 0.189 0.941 CD8_TEM L2
ENSG00000057704 TMCC3 202511 sc-eQTL 9.00e-01 0.0204 0.163 0.941 CD8_TEM L2
ENSG00000111142 METAP2 -620452 sc-eQTL 2.97e-01 0.192 0.183 0.941 CD8_TEM L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 1.63e-01 -0.269 0.193 0.941 CD8_TEM L2
ENSG00000136014 USP44 -698408 sc-eQTL 4.27e-01 -0.128 0.16 0.941 CD8_TEM L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 5.80e-01 0.101 0.183 0.941 CD8_TEM L2
ENSG00000173588 CEP83 393080 sc-eQTL 1.28e-01 -0.287 0.188 0.941 CD8_TEM L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 7.81e-01 -0.0448 0.161 0.941 CD8_TEM L2
ENSG00000028203 VEZT -364678 sc-eQTL 1.85e-02 -0.427 0.18 0.935 MAIT L2
ENSG00000057704 TMCC3 202511 sc-eQTL 8.38e-01 0.0315 0.154 0.935 MAIT L2
ENSG00000074527 NTN4 -938084 sc-eQTL 3.41e-02 0.297 0.139 0.935 MAIT L2
ENSG00000111142 METAP2 -620452 sc-eQTL 1.49e-01 0.255 0.176 0.935 MAIT L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 2.32e-01 -0.205 0.171 0.935 MAIT L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 1.94e-01 0.196 0.151 0.935 MAIT L2
ENSG00000173588 CEP83 393080 sc-eQTL 5.19e-01 0.112 0.173 0.935 MAIT L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 1.86e-01 0.2 0.151 0.935 MAIT L2
ENSG00000028203 VEZT -364678 sc-eQTL 1.44e-01 -0.262 0.179 0.933 NK_CD56bright L2
ENSG00000057704 TMCC3 202511 sc-eQTL 9.00e-01 -0.0217 0.172 0.933 NK_CD56bright L2
ENSG00000111142 METAP2 -620452 sc-eQTL 2.34e-02 0.399 0.175 0.933 NK_CD56bright L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 8.51e-01 0.0348 0.186 0.933 NK_CD56bright L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 2.16e-01 -0.188 0.152 0.933 NK_CD56bright L2
ENSG00000173588 CEP83 393080 sc-eQTL 7.45e-01 0.0502 0.154 0.933 NK_CD56bright L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 6.45e-01 0.0681 0.148 0.933 NK_CD56bright L2
ENSG00000028203 VEZT -364678 sc-eQTL 9.13e-01 0.0192 0.176 0.935 NK_CD56dim L2
ENSG00000057704 TMCC3 202511 sc-eQTL 7.32e-02 0.273 0.152 0.935 NK_CD56dim L2
ENSG00000111142 METAP2 -620452 sc-eQTL 2.77e-01 0.172 0.158 0.935 NK_CD56dim L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 1.31e-02 0.398 0.159 0.935 NK_CD56dim L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 5.87e-01 0.0771 0.142 0.935 NK_CD56dim L2
ENSG00000173588 CEP83 393080 sc-eQTL 7.07e-01 0.0616 0.164 0.935 NK_CD56dim L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 3.20e-01 0.114 0.114 0.935 NK_CD56dim L2
ENSG00000028203 VEZT -364678 sc-eQTL 5.85e-01 0.107 0.196 0.936 NK_HLA L2
ENSG00000057704 TMCC3 202511 sc-eQTL 9.26e-03 0.45 0.171 0.936 NK_HLA L2
ENSG00000111142 METAP2 -620452 sc-eQTL 2.63e-01 -0.205 0.183 0.936 NK_HLA L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 1.67e-01 0.267 0.192 0.936 NK_HLA L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 7.77e-01 0.0447 0.158 0.936 NK_HLA L2
ENSG00000173588 CEP83 393080 sc-eQTL 9.06e-01 -0.0214 0.181 0.936 NK_HLA L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 9.69e-01 0.00625 0.163 0.936 NK_HLA L2
ENSG00000028203 VEZT -364678 sc-eQTL 4.98e-01 0.109 0.161 0.935 NK_cytokine L2
ENSG00000057704 TMCC3 202511 sc-eQTL 6.75e-02 0.302 0.164 0.935 NK_cytokine L2
ENSG00000111142 METAP2 -620452 sc-eQTL 8.12e-01 0.0391 0.164 0.935 NK_cytokine L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 2.09e-02 -0.39 0.168 0.935 NK_cytokine L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 5.78e-02 -0.278 0.146 0.935 NK_cytokine L2
ENSG00000173588 CEP83 393080 sc-eQTL 2.88e-01 0.179 0.168 0.935 NK_cytokine L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 2.80e-01 0.127 0.117 0.935 NK_cytokine L2
ENSG00000028203 VEZT -364678 sc-eQTL 2.90e-01 -0.229 0.215 0.933 PB L2
ENSG00000057704 TMCC3 202511 sc-eQTL 9.05e-01 0.0232 0.195 0.933 PB L2
ENSG00000111142 METAP2 -620452 sc-eQTL 9.42e-01 -0.0156 0.216 0.933 PB L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 4.76e-01 0.146 0.205 0.933 PB L2
ENSG00000136014 USP44 -698408 sc-eQTL 6.15e-02 -0.359 0.19 0.933 PB L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 6.59e-01 -0.0882 0.199 0.933 PB L2
ENSG00000173588 CEP83 393080 sc-eQTL 7.96e-02 0.362 0.205 0.933 PB L2
ENSG00000180263 FGD6 -364414 sc-eQTL 2.94e-01 0.181 0.172 0.933 PB L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 9.23e-01 0.0117 0.121 0.933 PB L2
ENSG00000028203 VEZT -364678 sc-eQTL 6.95e-01 -0.067 0.171 0.935 Pro_T L2
ENSG00000057704 TMCC3 202511 sc-eQTL 3.67e-01 -0.137 0.152 0.935 Pro_T L2
ENSG00000074527 NTN4 -938084 sc-eQTL 3.99e-01 0.105 0.124 0.935 Pro_T L2
ENSG00000111142 METAP2 -620452 sc-eQTL 8.73e-01 -0.0234 0.147 0.935 Pro_T L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 4.79e-01 -0.125 0.176 0.935 Pro_T L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 8.07e-01 -0.0422 0.173 0.935 Pro_T L2
ENSG00000173588 CEP83 393080 sc-eQTL 8.76e-01 0.0268 0.171 0.935 Pro_T L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 5.10e-02 -0.208 0.106 0.935 Pro_T L2
ENSG00000028203 VEZT -364678 sc-eQTL 7.64e-01 0.0531 0.176 0.936 Treg L2
ENSG00000111142 METAP2 -620452 sc-eQTL 8.58e-02 0.285 0.165 0.936 Treg L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 5.53e-01 -0.104 0.176 0.936 Treg L2
ENSG00000136014 USP44 -698408 sc-eQTL 2.13e-01 -0.196 0.157 0.936 Treg L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 2.25e-01 0.197 0.162 0.936 Treg L2
ENSG00000173588 CEP83 393080 sc-eQTL 7.19e-01 -0.0625 0.174 0.936 Treg L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 3.15e-01 0.134 0.133 0.936 Treg L2
ENSG00000028203 VEZT -364678 sc-eQTL 9.89e-01 -0.00245 0.174 0.937 cDC L2
ENSG00000057704 TMCC3 202511 sc-eQTL 7.87e-01 0.0506 0.187 0.937 cDC L2
ENSG00000111142 METAP2 -620452 sc-eQTL 7.29e-01 0.0661 0.19 0.937 cDC L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 5.05e-01 -0.122 0.183 0.937 cDC L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 2.56e-01 0.186 0.163 0.937 cDC L2
ENSG00000173588 CEP83 393080 sc-eQTL 1.47e-01 -0.222 0.152 0.937 cDC L2
ENSG00000180263 FGD6 -364414 sc-eQTL 6.46e-01 -0.0809 0.176 0.937 cDC L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 1.28e-01 0.228 0.149 0.937 cDC L2
ENSG00000028203 VEZT -364678 sc-eQTL 9.72e-01 -0.00617 0.179 0.936 cMono_IL1B L2
ENSG00000057704 TMCC3 202511 sc-eQTL 5.61e-02 0.267 0.139 0.936 cMono_IL1B L2
ENSG00000111142 METAP2 -620452 sc-eQTL 2.26e-01 0.186 0.154 0.936 cMono_IL1B L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 6.24e-01 -0.0796 0.162 0.936 cMono_IL1B L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 1.13e-01 0.196 0.123 0.936 cMono_IL1B L2
ENSG00000173588 CEP83 393080 sc-eQTL 1.11e-01 -0.269 0.168 0.936 cMono_IL1B L2
ENSG00000180263 FGD6 -364414 sc-eQTL 8.20e-02 -0.25 0.143 0.936 cMono_IL1B L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 9.74e-01 0.00335 0.102 0.936 cMono_IL1B L2
ENSG00000028203 VEZT -364678 sc-eQTL 3.16e-01 -0.181 0.18 0.936 cMono_S100A L2
ENSG00000057704 TMCC3 202511 sc-eQTL 7.96e-01 0.0409 0.158 0.936 cMono_S100A L2
ENSG00000111142 METAP2 -620452 sc-eQTL 5.32e-01 0.109 0.174 0.936 cMono_S100A L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 5.19e-01 -0.111 0.172 0.936 cMono_S100A L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 8.23e-01 0.0288 0.129 0.936 cMono_S100A L2
ENSG00000173588 CEP83 393080 sc-eQTL 3.98e-01 -0.154 0.182 0.936 cMono_S100A L2
ENSG00000180263 FGD6 -364414 sc-eQTL 3.07e-01 -0.171 0.167 0.936 cMono_S100A L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 3.06e-01 -0.122 0.119 0.936 cMono_S100A L2
ENSG00000028203 VEZT -364678 sc-eQTL 5.50e-01 -0.125 0.209 0.924 gdT L2
ENSG00000057704 TMCC3 202511 sc-eQTL 8.12e-01 0.038 0.16 0.924 gdT L2
ENSG00000074527 NTN4 -938084 sc-eQTL 4.57e-01 0.118 0.158 0.924 gdT L2
ENSG00000111142 METAP2 -620452 sc-eQTL 9.38e-02 0.332 0.197 0.924 gdT L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 8.79e-01 -0.0323 0.212 0.924 gdT L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 8.34e-01 0.0423 0.201 0.924 gdT L2
ENSG00000173588 CEP83 393080 sc-eQTL 6.66e-01 -0.0851 0.197 0.924 gdT L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 2.28e-01 0.206 0.17 0.924 gdT L2
ENSG00000028203 VEZT -364678 sc-eQTL 4.59e-02 -0.381 0.19 0.938 intMono L2
ENSG00000057704 TMCC3 202511 sc-eQTL 8.01e-01 -0.047 0.186 0.938 intMono L2
ENSG00000111142 METAP2 -620452 sc-eQTL 4.20e-01 0.157 0.195 0.938 intMono L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 5.56e-01 0.107 0.182 0.938 intMono L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 7.94e-01 0.041 0.157 0.938 intMono L2
ENSG00000173588 CEP83 393080 sc-eQTL 3.87e-01 -0.164 0.189 0.938 intMono L2
ENSG00000180263 FGD6 -364414 sc-eQTL 8.14e-01 0.04 0.17 0.938 intMono L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 6.87e-01 -0.0488 0.121 0.938 intMono L2
ENSG00000028203 VEZT -364678 sc-eQTL 4.92e-01 0.116 0.169 0.932 ncMono L2
ENSG00000057704 TMCC3 202511 sc-eQTL 8.51e-01 -0.0306 0.163 0.932 ncMono L2
ENSG00000111142 METAP2 -620452 sc-eQTL 6.50e-01 -0.0807 0.177 0.932 ncMono L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 4.94e-01 0.121 0.176 0.932 ncMono L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 2.74e-01 0.123 0.112 0.932 ncMono L2
ENSG00000173588 CEP83 393080 sc-eQTL 5.84e-01 0.0962 0.175 0.932 ncMono L2
ENSG00000180263 FGD6 -364414 sc-eQTL 3.10e-01 0.169 0.166 0.932 ncMono L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 7.67e-01 -0.0441 0.148 0.932 ncMono L2
ENSG00000028203 VEZT -364678 sc-eQTL 9.64e-01 -0.00854 0.187 0.924 pDC L2
ENSG00000057704 TMCC3 202511 sc-eQTL 3.28e-02 0.386 0.179 0.924 pDC L2
ENSG00000111142 METAP2 -620452 sc-eQTL 6.35e-01 0.0904 0.19 0.924 pDC L2
ENSG00000120798 NR2C1 -220560 sc-eQTL 4.47e-01 0.143 0.188 0.924 pDC L2
ENSG00000136040 PLXNC1 704491 sc-eQTL 2.95e-01 0.189 0.18 0.924 pDC L2
ENSG00000173588 CEP83 393080 sc-eQTL 5.09e-02 0.378 0.192 0.924 pDC L2
ENSG00000180263 FGD6 -364414 sc-eQTL 8.63e-01 0.0284 0.164 0.924 pDC L2
ENSG00000184752 NDUFA12 -150680 sc-eQTL 3.15e-01 -0.162 0.161 0.924 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -364678 sc-eQTL 2.19e-02 -0.397 0.172 0.936 B_Memory LOneK1K
ENSG00000057704 TMCC3 202511 sc-eQTL 3.12e-01 0.186 0.183 0.936 B_Memory LOneK1K
ENSG00000111142 METAP2 -620452 sc-eQTL 5.37e-01 0.1 0.162 0.936 B_Memory LOneK1K
ENSG00000120798 NR2C1 -220560 sc-eQTL 7.02e-01 -0.0714 0.186 0.936 B_Memory LOneK1K
ENSG00000136014 USP44 -698408 sc-eQTL 6.91e-01 0.0686 0.172 0.936 B_Memory LOneK1K
ENSG00000136040 PLXNC1 704491 sc-eQTL 7.48e-01 -0.0357 0.111 0.936 B_Memory LOneK1K
ENSG00000173588 CEP83 393080 sc-eQTL 5.68e-01 0.0885 0.155 0.936 B_Memory LOneK1K
ENSG00000180263 FGD6 -364414 sc-eQTL 2.22e-01 0.188 0.154 0.936 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -150680 sc-eQTL 9.90e-02 0.175 0.106 0.936 B_Memory LOneK1K
ENSG00000028203 VEZT -364678 sc-eQTL 6.60e-02 -0.3 0.162 0.936 B_Naive LOneK1K
ENSG00000057704 TMCC3 202511 sc-eQTL 7.15e-01 -0.0606 0.166 0.936 B_Naive LOneK1K
ENSG00000111142 METAP2 -620452 sc-eQTL 9.59e-01 -0.00708 0.136 0.936 B_Naive LOneK1K
ENSG00000120798 NR2C1 -220560 sc-eQTL 9.66e-01 -0.00767 0.177 0.936 B_Naive LOneK1K
ENSG00000136014 USP44 -698408 sc-eQTL 8.26e-01 -0.0347 0.157 0.936 B_Naive LOneK1K
ENSG00000136040 PLXNC1 704491 sc-eQTL 1.39e-01 -0.199 0.134 0.936 B_Naive LOneK1K
ENSG00000173588 CEP83 393080 sc-eQTL 9.39e-01 0.0107 0.14 0.936 B_Naive LOneK1K
ENSG00000180263 FGD6 -364414 sc-eQTL 6.20e-01 0.0858 0.173 0.936 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -150680 sc-eQTL 4.80e-01 -0.0675 0.0955 0.936 B_Naive LOneK1K
ENSG00000028203 VEZT -364678 sc-eQTL 5.88e-01 -0.0891 0.164 0.936 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 202511 sc-eQTL 1.41e-01 0.191 0.129 0.936 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -620452 sc-eQTL 3.12e-01 0.142 0.14 0.936 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -220560 sc-eQTL 3.94e-01 -0.13 0.153 0.936 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 704491 sc-eQTL 2.02e-01 0.147 0.115 0.936 CD14_Mono LOneK1K
ENSG00000173588 CEP83 393080 sc-eQTL 1.65e-02 -0.375 0.155 0.936 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -364414 sc-eQTL 6.96e-02 -0.257 0.141 0.936 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -150680 sc-eQTL 6.49e-01 -0.0444 0.0974 0.936 CD14_Mono LOneK1K
ENSG00000028203 VEZT -364678 sc-eQTL 2.46e-01 -0.209 0.179 0.935 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 202511 sc-eQTL 7.19e-01 0.06 0.167 0.935 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -620452 sc-eQTL 8.57e-01 -0.0298 0.165 0.935 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -220560 sc-eQTL 7.81e-01 0.0515 0.185 0.935 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 704491 sc-eQTL 3.54e-01 0.0986 0.106 0.935 CD16_Mono LOneK1K
ENSG00000173588 CEP83 393080 sc-eQTL 9.64e-01 -0.00797 0.177 0.935 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -364414 sc-eQTL 4.32e-01 0.119 0.151 0.935 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -150680 sc-eQTL 8.28e-01 -0.0262 0.12 0.935 CD16_Mono LOneK1K
ENSG00000028203 VEZT -364678 sc-eQTL 2.41e-01 0.192 0.163 0.935 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 202511 sc-eQTL 1.83e-02 0.358 0.151 0.935 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -620452 sc-eQTL 5.57e-01 0.0768 0.131 0.935 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -220560 sc-eQTL 1.71e-01 0.202 0.147 0.935 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 704491 sc-eQTL 6.88e-01 -0.0522 0.13 0.935 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 393080 sc-eQTL 3.51e-01 0.136 0.146 0.935 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -150680 sc-eQTL 3.02e-01 0.111 0.107 0.935 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000028203 VEZT -364678 eQTL 0.0432 -0.0504 0.0249 0.0 0.0 0.0829
ENSG00000074527 NTN4 -938084 eQTL 0.0393 0.118 0.0571 0.0 0.0 0.0829
ENSG00000111142 METAP2 -620452 eQTL 0.0429 0.0317 0.0156 0.0 0.0 0.0829
ENSG00000180263 FGD6 -364414 eQTL 0.00282 0.101 0.0338 0.0 0.0 0.0829
ENSG00000184752 NDUFA12 -150680 eQTL 0.0282 0.0687 0.0313 0.0 0.0 0.0829

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000074527 NTN4 -938084 2.66e-07 1.06e-07 3.35e-08 1.78e-07 9.91e-08 9.32e-08 1.39e-07 5.21e-08 1.37e-07 4.24e-08 1.63e-07 7.58e-08 1.27e-07 6.21e-08 5.14e-08 7.87e-08 5.1e-08 1.07e-07 5.2e-08 3.88e-08 1.03e-07 1.31e-07 1.29e-07 4.67e-08 1.29e-07 1.13e-07 1.13e-07 8.45e-08 9.97e-08 1.1e-07 9.75e-08 3.89e-08 2.74e-08 8.68e-08 9.24e-08 4.02e-08 4.51e-08 9.26e-08 8.3e-08 3.05e-08 3.27e-08 1.39e-07 3.91e-08 3.84e-08 8.79e-08 1.75e-08 1.34e-07 4.5e-09 4.74e-08
ENSG00000184752 NDUFA12 -150680 4.24e-06 3.64e-06 2.72e-07 2e-06 4.41e-07 7.41e-07 2.24e-06 5.6e-07 1.96e-06 1.01e-06 2.57e-06 1.33e-06 3.93e-06 1.41e-06 8.32e-07 1.54e-06 1.15e-06 2.26e-06 1.61e-06 1.37e-06 9.48e-07 2.76e-06 2.54e-06 1.17e-06 4.05e-06 1.19e-06 1.42e-06 1.54e-06 2.17e-06 2.46e-06 1.89e-06 2.77e-07 3.99e-07 1.27e-06 1.6e-06 6.32e-07 7.42e-07 3.3e-07 6.98e-07 3.8e-07 2.84e-07 4.08e-06 5.58e-07 6.55e-08 3.57e-07 3.21e-07 4.15e-07 1.97e-07 1.58e-07