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Genes within 1Mb (chr12:94845899:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -371847 sc-eQTL 7.75e-02 -0.252 0.142 0.934 B L1
ENSG00000057704 TMCC3 195342 sc-eQTL 4.15e-01 -0.137 0.168 0.934 B L1
ENSG00000111142 METAP2 -627621 sc-eQTL 8.94e-01 -0.0168 0.126 0.934 B L1
ENSG00000120798 NR2C1 -227729 sc-eQTL 9.51e-01 -0.0097 0.159 0.934 B L1
ENSG00000136014 USP44 -705577 sc-eQTL 7.55e-01 0.0453 0.145 0.934 B L1
ENSG00000136040 PLXNC1 697322 sc-eQTL 2.30e-01 -0.114 0.095 0.934 B L1
ENSG00000173588 CEP83 385911 sc-eQTL 4.71e-01 0.0868 0.12 0.934 B L1
ENSG00000180263 FGD6 -371583 sc-eQTL 3.81e-01 0.127 0.145 0.934 B L1
ENSG00000184752 NDUFA12 -157849 sc-eQTL 5.23e-01 0.0443 0.0693 0.934 B L1
ENSG00000028203 VEZT -371847 sc-eQTL 7.33e-01 -0.0408 0.119 0.934 CD4T L1
ENSG00000111142 METAP2 -627621 sc-eQTL 8.98e-01 -0.0133 0.104 0.934 CD4T L1
ENSG00000120798 NR2C1 -227729 sc-eQTL 9.97e-02 0.19 0.115 0.934 CD4T L1
ENSG00000136014 USP44 -705577 sc-eQTL 7.63e-01 -0.0477 0.158 0.934 CD4T L1
ENSG00000136040 PLXNC1 697322 sc-eQTL 2.70e-01 0.112 0.101 0.934 CD4T L1
ENSG00000173588 CEP83 385911 sc-eQTL 4.55e-01 -0.0794 0.106 0.934 CD4T L1
ENSG00000184752 NDUFA12 -157849 sc-eQTL 2.95e-01 0.117 0.111 0.934 CD4T L1
ENSG00000028203 VEZT -371847 sc-eQTL 5.19e-02 -0.276 0.141 0.934 CD8T L1
ENSG00000057704 TMCC3 195342 sc-eQTL 2.45e-01 0.111 0.0954 0.934 CD8T L1
ENSG00000111142 METAP2 -627621 sc-eQTL 6.25e-01 0.0596 0.122 0.934 CD8T L1
ENSG00000120798 NR2C1 -227729 sc-eQTL 8.35e-01 -0.0323 0.155 0.934 CD8T L1
ENSG00000136014 USP44 -705577 sc-eQTL 7.22e-01 -0.0494 0.139 0.934 CD8T L1
ENSG00000136040 PLXNC1 697322 sc-eQTL 5.97e-01 -0.0697 0.132 0.934 CD8T L1
ENSG00000173588 CEP83 385911 sc-eQTL 8.65e-01 -0.021 0.123 0.934 CD8T L1
ENSG00000184752 NDUFA12 -157849 sc-eQTL 5.07e-01 0.0668 0.101 0.934 CD8T L1
ENSG00000028203 VEZT -371847 sc-eQTL 5.38e-01 0.102 0.165 0.932 DC L1
ENSG00000057704 TMCC3 195342 sc-eQTL 3.53e-01 0.162 0.174 0.932 DC L1
ENSG00000111142 METAP2 -627621 sc-eQTL 7.59e-01 0.0531 0.173 0.932 DC L1
ENSG00000120798 NR2C1 -227729 sc-eQTL 7.94e-01 0.0439 0.168 0.932 DC L1
ENSG00000136040 PLXNC1 697322 sc-eQTL 3.31e-01 0.152 0.156 0.932 DC L1
ENSG00000173588 CEP83 385911 sc-eQTL 5.63e-01 0.0805 0.139 0.932 DC L1
ENSG00000180263 FGD6 -371583 sc-eQTL 3.32e-01 -0.15 0.155 0.932 DC L1
ENSG00000184752 NDUFA12 -157849 sc-eQTL 2.79e-01 0.141 0.13 0.932 DC L1
ENSG00000028203 VEZT -371847 sc-eQTL 4.83e-01 -0.111 0.158 0.934 Mono L1
ENSG00000057704 TMCC3 195342 sc-eQTL 1.20e-01 0.191 0.122 0.934 Mono L1
ENSG00000111142 METAP2 -627621 sc-eQTL 6.12e-01 0.064 0.126 0.934 Mono L1
ENSG00000120798 NR2C1 -227729 sc-eQTL 8.53e-01 -0.028 0.15 0.934 Mono L1
ENSG00000136040 PLXNC1 697322 sc-eQTL 5.43e-02 0.196 0.101 0.934 Mono L1
ENSG00000173588 CEP83 385911 sc-eQTL 5.47e-03 -0.416 0.148 0.934 Mono L1
ENSG00000180263 FGD6 -371583 sc-eQTL 7.95e-02 -0.235 0.133 0.934 Mono L1
ENSG00000184752 NDUFA12 -157849 sc-eQTL 8.48e-01 -0.0185 0.0965 0.934 Mono L1
ENSG00000028203 VEZT -371847 sc-eQTL 5.32e-01 0.0976 0.156 0.933 NK L1
ENSG00000057704 TMCC3 195342 sc-eQTL 4.54e-02 0.293 0.146 0.933 NK L1
ENSG00000111142 METAP2 -627621 sc-eQTL 5.19e-01 0.0797 0.123 0.933 NK L1
ENSG00000120798 NR2C1 -227729 sc-eQTL 3.16e-01 0.147 0.146 0.933 NK L1
ENSG00000136040 PLXNC1 697322 sc-eQTL 4.68e-01 -0.0874 0.12 0.933 NK L1
ENSG00000173588 CEP83 385911 sc-eQTL 4.81e-01 0.0964 0.137 0.933 NK L1
ENSG00000184752 NDUFA12 -157849 sc-eQTL 3.66e-01 0.0914 0.101 0.933 NK L1
ENSG00000028203 VEZT -371847 sc-eQTL 3.56e-02 -0.36 0.17 0.934 Other_T L1
ENSG00000057704 TMCC3 195342 sc-eQTL 5.68e-01 0.0838 0.146 0.934 Other_T L1
ENSG00000074527 NTN4 -945253 sc-eQTL 3.89e-02 0.267 0.128 0.934 Other_T L1
ENSG00000111142 METAP2 -627621 sc-eQTL 4.73e-02 0.264 0.133 0.934 Other_T L1
ENSG00000120798 NR2C1 -227729 sc-eQTL 6.36e-01 -0.0791 0.167 0.934 Other_T L1
ENSG00000136040 PLXNC1 697322 sc-eQTL 4.66e-01 0.0989 0.135 0.934 Other_T L1
ENSG00000173588 CEP83 385911 sc-eQTL 8.30e-01 -0.0327 0.153 0.934 Other_T L1
ENSG00000184752 NDUFA12 -157849 sc-eQTL 8.83e-01 0.0125 0.0849 0.934 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -371847 sc-eQTL 9.56e-01 -0.0112 0.201 0.934 B_Activated L2
ENSG00000057704 TMCC3 195342 sc-eQTL 1.52e-01 -0.245 0.17 0.934 B_Activated L2
ENSG00000111142 METAP2 -627621 sc-eQTL 7.80e-01 0.0586 0.209 0.934 B_Activated L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 5.54e-01 -0.119 0.201 0.934 B_Activated L2
ENSG00000136014 USP44 -705577 sc-eQTL 5.27e-01 0.097 0.153 0.934 B_Activated L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 4.42e-01 0.124 0.161 0.934 B_Activated L2
ENSG00000173588 CEP83 385911 sc-eQTL 1.32e-01 0.302 0.2 0.934 B_Activated L2
ENSG00000180263 FGD6 -371583 sc-eQTL 6.70e-03 -0.381 0.139 0.934 B_Activated L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 4.69e-01 -0.129 0.177 0.934 B_Activated L2
ENSG00000028203 VEZT -371847 sc-eQTL 3.78e-02 -0.352 0.168 0.933 B_Intermediate L2
ENSG00000057704 TMCC3 195342 sc-eQTL 8.39e-01 -0.0351 0.172 0.933 B_Intermediate L2
ENSG00000111142 METAP2 -627621 sc-eQTL 6.16e-01 0.0788 0.157 0.933 B_Intermediate L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 6.82e-01 -0.0705 0.172 0.933 B_Intermediate L2
ENSG00000136014 USP44 -705577 sc-eQTL 8.13e-01 0.0417 0.176 0.933 B_Intermediate L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 6.00e-01 -0.076 0.145 0.933 B_Intermediate L2
ENSG00000173588 CEP83 385911 sc-eQTL 9.21e-01 0.0159 0.161 0.933 B_Intermediate L2
ENSG00000180263 FGD6 -371583 sc-eQTL 4.79e-01 0.112 0.157 0.933 B_Intermediate L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 1.56e-01 0.185 0.13 0.933 B_Intermediate L2
ENSG00000028203 VEZT -371847 sc-eQTL 6.10e-01 -0.0906 0.178 0.933 B_Memory L2
ENSG00000057704 TMCC3 195342 sc-eQTL 1.54e-01 0.256 0.179 0.933 B_Memory L2
ENSG00000111142 METAP2 -627621 sc-eQTL 6.94e-01 -0.0678 0.172 0.933 B_Memory L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 7.50e-01 -0.0592 0.185 0.933 B_Memory L2
ENSG00000136014 USP44 -705577 sc-eQTL 5.30e-01 0.104 0.165 0.933 B_Memory L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 6.96e-01 0.0546 0.14 0.933 B_Memory L2
ENSG00000173588 CEP83 385911 sc-eQTL 3.32e-01 0.158 0.162 0.933 B_Memory L2
ENSG00000180263 FGD6 -371583 sc-eQTL 1.93e-01 0.214 0.164 0.933 B_Memory L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 2.39e-01 0.156 0.132 0.933 B_Memory L2
ENSG00000028203 VEZT -371847 sc-eQTL 1.65e-01 -0.234 0.168 0.934 B_Naive1 L2
ENSG00000057704 TMCC3 195342 sc-eQTL 2.90e-01 -0.18 0.17 0.934 B_Naive1 L2
ENSG00000111142 METAP2 -627621 sc-eQTL 2.98e-01 0.149 0.143 0.934 B_Naive1 L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 1.68e-01 0.24 0.174 0.934 B_Naive1 L2
ENSG00000136014 USP44 -705577 sc-eQTL 4.98e-01 -0.117 0.172 0.934 B_Naive1 L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 1.82e-01 -0.193 0.144 0.934 B_Naive1 L2
ENSG00000173588 CEP83 385911 sc-eQTL 8.68e-01 -0.025 0.149 0.934 B_Naive1 L2
ENSG00000180263 FGD6 -371583 sc-eQTL 9.03e-01 -0.0199 0.164 0.934 B_Naive1 L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 7.31e-01 -0.0328 0.0954 0.934 B_Naive1 L2
ENSG00000028203 VEZT -371847 sc-eQTL 5.00e-01 -0.124 0.183 0.933 B_Naive2 L2
ENSG00000057704 TMCC3 195342 sc-eQTL 1.19e-01 0.26 0.166 0.933 B_Naive2 L2
ENSG00000111142 METAP2 -627621 sc-eQTL 3.02e-01 -0.175 0.169 0.933 B_Naive2 L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 6.15e-02 -0.345 0.183 0.933 B_Naive2 L2
ENSG00000136014 USP44 -705577 sc-eQTL 9.55e-01 0.00947 0.169 0.933 B_Naive2 L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 1.80e-01 -0.21 0.156 0.933 B_Naive2 L2
ENSG00000173588 CEP83 385911 sc-eQTL 7.73e-01 0.0476 0.165 0.933 B_Naive2 L2
ENSG00000180263 FGD6 -371583 sc-eQTL 1.58e-01 0.195 0.138 0.933 B_Naive2 L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 6.35e-01 0.0647 0.136 0.933 B_Naive2 L2
ENSG00000028203 VEZT -371847 sc-eQTL 4.10e-01 -0.147 0.178 0.936 CD4_CTL L2
ENSG00000111142 METAP2 -627621 sc-eQTL 6.59e-01 -0.0821 0.186 0.936 CD4_CTL L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 1.08e-01 0.299 0.186 0.936 CD4_CTL L2
ENSG00000136014 USP44 -705577 sc-eQTL 1.67e-01 -0.205 0.147 0.936 CD4_CTL L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 8.27e-01 0.0364 0.166 0.936 CD4_CTL L2
ENSG00000173588 CEP83 385911 sc-eQTL 1.33e-01 -0.255 0.169 0.936 CD4_CTL L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 8.86e-01 0.0221 0.153 0.936 CD4_CTL L2
ENSG00000028203 VEZT -371847 sc-eQTL 6.11e-01 0.0695 0.136 0.934 CD4_Naive L2
ENSG00000111142 METAP2 -627621 sc-eQTL 4.91e-01 0.0815 0.118 0.934 CD4_Naive L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 1.20e-01 0.224 0.143 0.934 CD4_Naive L2
ENSG00000136014 USP44 -705577 sc-eQTL 8.65e-01 -0.0282 0.166 0.934 CD4_Naive L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 2.10e-01 0.142 0.113 0.934 CD4_Naive L2
ENSG00000173588 CEP83 385911 sc-eQTL 6.61e-01 -0.0538 0.122 0.934 CD4_Naive L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 4.23e-01 0.0842 0.105 0.934 CD4_Naive L2
ENSG00000028203 VEZT -371847 sc-eQTL 4.77e-02 -0.281 0.141 0.934 CD4_TCM L2
ENSG00000111142 METAP2 -627621 sc-eQTL 4.30e-01 -0.105 0.133 0.934 CD4_TCM L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 1.34e-01 0.232 0.155 0.934 CD4_TCM L2
ENSG00000136014 USP44 -705577 sc-eQTL 7.86e-01 -0.0492 0.181 0.934 CD4_TCM L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 8.64e-01 0.0229 0.133 0.934 CD4_TCM L2
ENSG00000173588 CEP83 385911 sc-eQTL 5.07e-01 -0.0941 0.142 0.934 CD4_TCM L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 7.21e-01 0.0438 0.122 0.934 CD4_TCM L2
ENSG00000028203 VEZT -371847 sc-eQTL 2.69e-01 -0.203 0.183 0.934 CD4_TEM L2
ENSG00000111142 METAP2 -627621 sc-eQTL 7.43e-01 -0.0534 0.163 0.934 CD4_TEM L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 8.66e-01 -0.0288 0.171 0.934 CD4_TEM L2
ENSG00000136014 USP44 -705577 sc-eQTL 8.11e-02 0.299 0.171 0.934 CD4_TEM L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 7.60e-01 -0.0449 0.147 0.934 CD4_TEM L2
ENSG00000173588 CEP83 385911 sc-eQTL 7.56e-01 -0.0511 0.165 0.934 CD4_TEM L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 3.41e-01 0.142 0.148 0.934 CD4_TEM L2
ENSG00000028203 VEZT -371847 sc-eQTL 2.59e-02 -0.36 0.16 0.934 CD8_CTL L2
ENSG00000057704 TMCC3 195342 sc-eQTL 3.24e-01 0.141 0.143 0.934 CD8_CTL L2
ENSG00000111142 METAP2 -627621 sc-eQTL 8.35e-01 -0.0338 0.162 0.934 CD8_CTL L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 9.53e-01 0.0107 0.179 0.934 CD8_CTL L2
ENSG00000136014 USP44 -705577 sc-eQTL 4.61e-01 -0.127 0.172 0.934 CD8_CTL L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 9.55e-01 -0.00823 0.147 0.934 CD8_CTL L2
ENSG00000173588 CEP83 385911 sc-eQTL 6.31e-01 -0.0776 0.161 0.934 CD8_CTL L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 6.92e-01 -0.0504 0.127 0.934 CD8_CTL L2
ENSG00000028203 VEZT -371847 sc-eQTL 1.65e-01 -0.23 0.165 0.934 CD8_Naive L2
ENSG00000057704 TMCC3 195342 sc-eQTL 3.59e-01 0.119 0.129 0.934 CD8_Naive L2
ENSG00000111142 METAP2 -627621 sc-eQTL 9.94e-01 0.00115 0.15 0.934 CD8_Naive L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 2.31e-01 -0.199 0.166 0.934 CD8_Naive L2
ENSG00000136014 USP44 -705577 sc-eQTL 6.24e-01 0.0736 0.15 0.934 CD8_Naive L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 6.63e-01 0.0662 0.152 0.934 CD8_Naive L2
ENSG00000173588 CEP83 385911 sc-eQTL 5.25e-01 -0.0932 0.146 0.934 CD8_Naive L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 4.76e-01 0.0865 0.121 0.934 CD8_Naive L2
ENSG00000028203 VEZT -371847 sc-eQTL 2.93e-01 -0.183 0.173 0.931 CD8_TCM L2
ENSG00000057704 TMCC3 195342 sc-eQTL 9.24e-01 0.0129 0.134 0.931 CD8_TCM L2
ENSG00000111142 METAP2 -627621 sc-eQTL 9.39e-01 -0.0136 0.176 0.931 CD8_TCM L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 2.40e-01 0.209 0.177 0.931 CD8_TCM L2
ENSG00000136014 USP44 -705577 sc-eQTL 8.07e-01 -0.0389 0.159 0.931 CD8_TCM L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 2.47e-01 -0.194 0.167 0.931 CD8_TCM L2
ENSG00000173588 CEP83 385911 sc-eQTL 3.59e-01 0.158 0.172 0.931 CD8_TCM L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 2.84e-01 -0.149 0.138 0.931 CD8_TCM L2
ENSG00000028203 VEZT -371847 sc-eQTL 6.86e-01 -0.075 0.185 0.938 CD8_TEM L2
ENSG00000057704 TMCC3 195342 sc-eQTL 9.83e-01 0.00337 0.159 0.938 CD8_TEM L2
ENSG00000111142 METAP2 -627621 sc-eQTL 1.48e-01 0.26 0.179 0.938 CD8_TEM L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 9.94e-02 -0.311 0.188 0.938 CD8_TEM L2
ENSG00000136014 USP44 -705577 sc-eQTL 4.54e-01 -0.118 0.157 0.938 CD8_TEM L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 4.50e-01 0.135 0.179 0.938 CD8_TEM L2
ENSG00000173588 CEP83 385911 sc-eQTL 1.03e-01 -0.3 0.183 0.938 CD8_TEM L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 8.69e-01 -0.026 0.158 0.938 CD8_TEM L2
ENSG00000028203 VEZT -371847 sc-eQTL 3.09e-02 -0.385 0.177 0.933 MAIT L2
ENSG00000057704 TMCC3 195342 sc-eQTL 6.59e-01 0.067 0.152 0.933 MAIT L2
ENSG00000074527 NTN4 -945253 sc-eQTL 8.59e-02 0.237 0.137 0.933 MAIT L2
ENSG00000111142 METAP2 -627621 sc-eQTL 6.49e-02 0.321 0.173 0.933 MAIT L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 3.24e-01 -0.167 0.169 0.933 MAIT L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 3.22e-01 0.147 0.148 0.933 MAIT L2
ENSG00000173588 CEP83 385911 sc-eQTL 3.68e-01 0.153 0.17 0.933 MAIT L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 1.87e-01 0.196 0.148 0.933 MAIT L2
ENSG00000028203 VEZT -371847 sc-eQTL 1.17e-01 -0.278 0.176 0.931 NK_CD56bright L2
ENSG00000057704 TMCC3 195342 sc-eQTL 7.12e-01 -0.0626 0.17 0.931 NK_CD56bright L2
ENSG00000111142 METAP2 -627621 sc-eQTL 1.91e-02 0.406 0.172 0.931 NK_CD56bright L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 9.75e-01 -0.00567 0.183 0.931 NK_CD56bright L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 2.05e-01 -0.19 0.149 0.931 NK_CD56bright L2
ENSG00000173588 CEP83 385911 sc-eQTL 9.90e-01 0.0019 0.152 0.931 NK_CD56bright L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 6.29e-01 0.0704 0.146 0.931 NK_CD56bright L2
ENSG00000028203 VEZT -371847 sc-eQTL 9.12e-01 -0.0191 0.173 0.933 NK_CD56dim L2
ENSG00000057704 TMCC3 195342 sc-eQTL 1.32e-01 0.226 0.149 0.933 NK_CD56dim L2
ENSG00000111142 METAP2 -627621 sc-eQTL 5.50e-01 0.0933 0.156 0.933 NK_CD56dim L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 6.36e-03 0.43 0.156 0.933 NK_CD56dim L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 1.63e-01 0.194 0.139 0.933 NK_CD56dim L2
ENSG00000173588 CEP83 385911 sc-eQTL 8.71e-01 0.0261 0.161 0.933 NK_CD56dim L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 4.51e-01 0.0848 0.112 0.933 NK_CD56dim L2
ENSG00000028203 VEZT -371847 sc-eQTL 5.85e-01 0.107 0.196 0.936 NK_HLA L2
ENSG00000057704 TMCC3 195342 sc-eQTL 9.26e-03 0.45 0.171 0.936 NK_HLA L2
ENSG00000111142 METAP2 -627621 sc-eQTL 2.63e-01 -0.205 0.183 0.936 NK_HLA L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 1.67e-01 0.267 0.192 0.936 NK_HLA L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 7.77e-01 0.0447 0.158 0.936 NK_HLA L2
ENSG00000173588 CEP83 385911 sc-eQTL 9.06e-01 -0.0214 0.181 0.936 NK_HLA L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 9.69e-01 0.00625 0.163 0.936 NK_HLA L2
ENSG00000028203 VEZT -371847 sc-eQTL 4.72e-01 0.115 0.159 0.933 NK_cytokine L2
ENSG00000057704 TMCC3 195342 sc-eQTL 1.07e-01 0.263 0.162 0.933 NK_cytokine L2
ENSG00000111142 METAP2 -627621 sc-eQTL 8.62e-01 0.0282 0.162 0.933 NK_cytokine L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 5.67e-02 -0.318 0.166 0.933 NK_cytokine L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 2.32e-02 -0.327 0.143 0.933 NK_cytokine L2
ENSG00000173588 CEP83 385911 sc-eQTL 5.08e-01 0.11 0.166 0.933 NK_cytokine L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 2.93e-01 0.122 0.116 0.933 NK_cytokine L2
ENSG00000028203 VEZT -371847 sc-eQTL 2.95e-01 -0.22 0.209 0.93 PB L2
ENSG00000057704 TMCC3 195342 sc-eQTL 8.13e-01 0.0449 0.19 0.93 PB L2
ENSG00000111142 METAP2 -627621 sc-eQTL 9.67e-01 -0.00873 0.21 0.93 PB L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 5.87e-01 0.109 0.199 0.93 PB L2
ENSG00000136014 USP44 -705577 sc-eQTL 4.77e-02 -0.37 0.185 0.93 PB L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 7.79e-01 -0.0547 0.194 0.93 PB L2
ENSG00000173588 CEP83 385911 sc-eQTL 6.07e-02 0.377 0.199 0.93 PB L2
ENSG00000180263 FGD6 -371583 sc-eQTL 3.66e-01 0.152 0.167 0.93 PB L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 7.80e-01 0.033 0.118 0.93 PB L2
ENSG00000028203 VEZT -371847 sc-eQTL 7.12e-01 -0.0621 0.168 0.933 Pro_T L2
ENSG00000057704 TMCC3 195342 sc-eQTL 4.18e-01 -0.121 0.15 0.933 Pro_T L2
ENSG00000074527 NTN4 -945253 sc-eQTL 6.31e-01 0.0589 0.122 0.933 Pro_T L2
ENSG00000111142 METAP2 -627621 sc-eQTL 9.53e-01 -0.00853 0.144 0.933 Pro_T L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 4.21e-01 -0.14 0.174 0.933 Pro_T L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 7.54e-01 -0.0536 0.17 0.933 Pro_T L2
ENSG00000173588 CEP83 385911 sc-eQTL 7.63e-01 0.0509 0.169 0.933 Pro_T L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 5.79e-02 -0.199 0.105 0.933 Pro_T L2
ENSG00000028203 VEZT -371847 sc-eQTL 8.87e-01 0.0247 0.174 0.934 Treg L2
ENSG00000111142 METAP2 -627621 sc-eQTL 5.59e-02 0.312 0.163 0.934 Treg L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 5.49e-01 -0.104 0.173 0.934 Treg L2
ENSG00000136014 USP44 -705577 sc-eQTL 2.80e-01 -0.168 0.155 0.934 Treg L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 2.22e-01 0.195 0.159 0.934 Treg L2
ENSG00000173588 CEP83 385911 sc-eQTL 5.95e-01 -0.0911 0.171 0.934 Treg L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 3.78e-01 0.116 0.131 0.934 Treg L2
ENSG00000028203 VEZT -371847 sc-eQTL 9.24e-01 -0.0164 0.171 0.934 cDC L2
ENSG00000057704 TMCC3 195342 sc-eQTL 8.08e-01 0.0448 0.184 0.934 cDC L2
ENSG00000111142 METAP2 -627621 sc-eQTL 6.49e-01 0.0854 0.187 0.934 cDC L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 4.98e-01 -0.122 0.18 0.934 cDC L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 1.57e-01 0.227 0.16 0.934 cDC L2
ENSG00000173588 CEP83 385911 sc-eQTL 1.13e-01 -0.238 0.15 0.934 cDC L2
ENSG00000180263 FGD6 -371583 sc-eQTL 5.74e-01 -0.0974 0.173 0.934 cDC L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 1.11e-01 0.234 0.146 0.934 cDC L2
ENSG00000028203 VEZT -371847 sc-eQTL 9.55e-01 0.00991 0.176 0.934 cMono_IL1B L2
ENSG00000057704 TMCC3 195342 sc-eQTL 2.68e-02 0.305 0.137 0.934 cMono_IL1B L2
ENSG00000111142 METAP2 -627621 sc-eQTL 1.57e-01 0.215 0.151 0.934 cMono_IL1B L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 7.76e-01 -0.0455 0.16 0.934 cMono_IL1B L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 7.14e-02 0.219 0.121 0.934 cMono_IL1B L2
ENSG00000173588 CEP83 385911 sc-eQTL 7.38e-02 -0.296 0.165 0.934 cMono_IL1B L2
ENSG00000180263 FGD6 -371583 sc-eQTL 5.92e-02 -0.267 0.141 0.934 cMono_IL1B L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 9.67e-01 0.0041 0.101 0.934 cMono_IL1B L2
ENSG00000028203 VEZT -371847 sc-eQTL 2.49e-01 -0.206 0.178 0.934 cMono_S100A L2
ENSG00000057704 TMCC3 195342 sc-eQTL 5.37e-01 0.0965 0.156 0.934 cMono_S100A L2
ENSG00000111142 METAP2 -627621 sc-eQTL 6.02e-01 0.09 0.172 0.934 cMono_S100A L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 4.11e-01 -0.14 0.17 0.934 cMono_S100A L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 7.75e-01 0.0365 0.127 0.934 cMono_S100A L2
ENSG00000173588 CEP83 385911 sc-eQTL 2.06e-01 -0.227 0.179 0.934 cMono_S100A L2
ENSG00000180263 FGD6 -371583 sc-eQTL 2.81e-01 -0.178 0.164 0.934 cMono_S100A L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 3.36e-01 -0.113 0.117 0.934 cMono_S100A L2
ENSG00000028203 VEZT -371847 sc-eQTL 5.50e-01 -0.125 0.209 0.924 gdT L2
ENSG00000057704 TMCC3 195342 sc-eQTL 8.12e-01 0.038 0.16 0.924 gdT L2
ENSG00000074527 NTN4 -945253 sc-eQTL 4.57e-01 0.118 0.158 0.924 gdT L2
ENSG00000111142 METAP2 -627621 sc-eQTL 9.38e-02 0.332 0.197 0.924 gdT L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 8.79e-01 -0.0323 0.212 0.924 gdT L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 8.34e-01 0.0423 0.201 0.924 gdT L2
ENSG00000173588 CEP83 385911 sc-eQTL 6.66e-01 -0.0851 0.197 0.924 gdT L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 2.28e-01 0.206 0.17 0.924 gdT L2
ENSG00000028203 VEZT -371847 sc-eQTL 5.15e-02 -0.367 0.187 0.936 intMono L2
ENSG00000057704 TMCC3 195342 sc-eQTL 6.19e-01 -0.0913 0.183 0.936 intMono L2
ENSG00000111142 METAP2 -627621 sc-eQTL 6.20e-01 0.0955 0.192 0.936 intMono L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 5.01e-01 0.121 0.179 0.936 intMono L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 6.01e-01 0.0809 0.154 0.936 intMono L2
ENSG00000173588 CEP83 385911 sc-eQTL 3.37e-01 -0.179 0.186 0.936 intMono L2
ENSG00000180263 FGD6 -371583 sc-eQTL 6.64e-01 0.0727 0.167 0.936 intMono L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 6.91e-01 -0.0475 0.119 0.936 intMono L2
ENSG00000028203 VEZT -371847 sc-eQTL 7.38e-01 0.0558 0.167 0.93 ncMono L2
ENSG00000057704 TMCC3 195342 sc-eQTL 8.29e-01 0.0348 0.161 0.93 ncMono L2
ENSG00000111142 METAP2 -627621 sc-eQTL 3.87e-01 -0.151 0.175 0.93 ncMono L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 3.50e-01 0.162 0.173 0.93 ncMono L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 1.27e-01 0.169 0.11 0.93 ncMono L2
ENSG00000173588 CEP83 385911 sc-eQTL 9.65e-01 -0.00765 0.173 0.93 ncMono L2
ENSG00000180263 FGD6 -371583 sc-eQTL 2.24e-01 0.2 0.164 0.93 ncMono L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 5.48e-01 -0.0879 0.146 0.93 ncMono L2
ENSG00000028203 VEZT -371847 sc-eQTL 9.64e-01 -0.00854 0.187 0.924 pDC L2
ENSG00000057704 TMCC3 195342 sc-eQTL 3.28e-02 0.386 0.179 0.924 pDC L2
ENSG00000111142 METAP2 -627621 sc-eQTL 6.35e-01 0.0904 0.19 0.924 pDC L2
ENSG00000120798 NR2C1 -227729 sc-eQTL 4.47e-01 0.143 0.188 0.924 pDC L2
ENSG00000136040 PLXNC1 697322 sc-eQTL 2.95e-01 0.189 0.18 0.924 pDC L2
ENSG00000173588 CEP83 385911 sc-eQTL 5.09e-02 0.378 0.192 0.924 pDC L2
ENSG00000180263 FGD6 -371583 sc-eQTL 8.63e-01 0.0284 0.164 0.924 pDC L2
ENSG00000184752 NDUFA12 -157849 sc-eQTL 3.15e-01 -0.162 0.161 0.924 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -371847 sc-eQTL 2.33e-02 -0.387 0.169 0.934 B_Memory LOneK1K
ENSG00000057704 TMCC3 195342 sc-eQTL 3.05e-01 0.186 0.18 0.934 B_Memory LOneK1K
ENSG00000111142 METAP2 -627621 sc-eQTL 4.05e-01 0.133 0.159 0.934 B_Memory LOneK1K
ENSG00000120798 NR2C1 -227729 sc-eQTL 9.81e-01 -0.00443 0.183 0.934 B_Memory LOneK1K
ENSG00000136014 USP44 -705577 sc-eQTL 4.53e-01 0.128 0.17 0.934 B_Memory LOneK1K
ENSG00000136040 PLXNC1 697322 sc-eQTL 7.02e-01 -0.0419 0.109 0.934 B_Memory LOneK1K
ENSG00000173588 CEP83 385911 sc-eQTL 3.81e-01 0.134 0.153 0.934 B_Memory LOneK1K
ENSG00000180263 FGD6 -371583 sc-eQTL 1.84e-01 0.202 0.151 0.934 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -157849 sc-eQTL 1.00e-01 0.172 0.104 0.934 B_Memory LOneK1K
ENSG00000028203 VEZT -371847 sc-eQTL 1.10e-01 -0.257 0.16 0.934 B_Naive LOneK1K
ENSG00000057704 TMCC3 195342 sc-eQTL 6.39e-01 -0.0768 0.164 0.934 B_Naive LOneK1K
ENSG00000111142 METAP2 -627621 sc-eQTL 9.44e-01 -0.00947 0.135 0.934 B_Naive LOneK1K
ENSG00000120798 NR2C1 -227729 sc-eQTL 9.88e-01 -0.00269 0.175 0.934 B_Naive LOneK1K
ENSG00000136014 USP44 -705577 sc-eQTL 9.18e-01 -0.0159 0.155 0.934 B_Naive LOneK1K
ENSG00000136040 PLXNC1 697322 sc-eQTL 1.40e-01 -0.195 0.132 0.934 B_Naive LOneK1K
ENSG00000173588 CEP83 385911 sc-eQTL 9.16e-01 -0.0146 0.138 0.934 B_Naive LOneK1K
ENSG00000180263 FGD6 -371583 sc-eQTL 6.84e-01 0.0696 0.171 0.934 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -157849 sc-eQTL 4.91e-01 -0.065 0.0942 0.934 B_Naive LOneK1K
ENSG00000028203 VEZT -371847 sc-eQTL 5.85e-01 -0.0886 0.162 0.934 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 195342 sc-eQTL 6.23e-02 0.238 0.127 0.934 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -627621 sc-eQTL 2.85e-01 0.148 0.138 0.934 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -227729 sc-eQTL 4.41e-01 -0.116 0.15 0.934 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 697322 sc-eQTL 1.34e-01 0.17 0.113 0.934 CD14_Mono LOneK1K
ENSG00000173588 CEP83 385911 sc-eQTL 4.58e-03 -0.436 0.152 0.934 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -371583 sc-eQTL 4.96e-02 -0.274 0.139 0.934 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -157849 sc-eQTL 6.69e-01 -0.0411 0.096 0.934 CD14_Mono LOneK1K
ENSG00000028203 VEZT -371847 sc-eQTL 2.27e-01 -0.214 0.177 0.933 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 195342 sc-eQTL 8.79e-01 0.0251 0.165 0.933 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -627621 sc-eQTL 6.31e-01 -0.0783 0.163 0.933 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -227729 sc-eQTL 6.45e-01 0.084 0.182 0.933 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 697322 sc-eQTL 1.17e-01 0.164 0.104 0.933 CD16_Mono LOneK1K
ENSG00000173588 CEP83 385911 sc-eQTL 5.74e-01 -0.0982 0.174 0.933 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -371583 sc-eQTL 2.59e-01 0.168 0.149 0.933 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -157849 sc-eQTL 7.43e-01 -0.039 0.119 0.933 CD16_Mono LOneK1K
ENSG00000028203 VEZT -371847 sc-eQTL 2.70e-01 0.177 0.16 0.933 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 195342 sc-eQTL 4.02e-02 0.306 0.148 0.933 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -627621 sc-eQTL 8.67e-01 0.0214 0.128 0.933 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -227729 sc-eQTL 7.68e-02 0.257 0.144 0.933 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 697322 sc-eQTL 9.38e-01 -0.00998 0.127 0.933 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 385911 sc-eQTL 4.91e-01 0.0989 0.143 0.933 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -157849 sc-eQTL 4.32e-01 0.0827 0.105 0.933 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000028203 VEZT -371847 eQTL 0.0363 -0.0518 0.0247 0.0 0.0 0.0844
ENSG00000074527 NTN4 -945253 eQTL 0.0306 0.123 0.0567 0.0 0.0 0.0844
ENSG00000180263 FGD6 -371583 eQTL 0.00182 0.105 0.0335 0.0 0.0 0.0844
ENSG00000184752 NDUFA12 -157849 eQTL 0.0139 0.0764 0.031 0.0 0.0 0.0844

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000074527 NTN4 -945253 2.61e-07 1.1e-07 3.65e-08 1.79e-07 8.92e-08 9.3e-08 1.42e-07 5.49e-08 1.41e-07 4.38e-08 1.62e-07 7.88e-08 1.26e-07 6.21e-08 5.44e-08 7.5e-08 4.94e-08 1.1e-07 5.19e-08 4.03e-08 1.05e-07 1.3e-07 1.3e-07 4.54e-08 1.31e-07 1.15e-07 1.12e-07 8.71e-08 9.88e-08 1.12e-07 9.58e-08 3.68e-08 2.91e-08 8.21e-08 9.13e-08 4.02e-08 4.51e-08 9.56e-08 8.3e-08 3.07e-08 3.61e-08 1.36e-07 4.04e-08 1.3e-08 7.26e-08 1.7e-08 1.24e-07 4.09e-09 4.73e-08
ENSG00000184752 NDUFA12 -157849 2.41e-06 2.49e-06 2.75e-07 1.62e-06 4.76e-07 7.98e-07 1.31e-06 4.95e-07 1.6e-06 7.38e-07 1.97e-06 1.38e-06 3.42e-06 9.52e-07 3.31e-07 1.45e-06 9.22e-07 1.51e-06 6.59e-07 7.6e-07 6.53e-07 2.43e-06 1.81e-06 9.14e-07 3.46e-06 9.49e-07 1.19e-06 1.26e-06 1.63e-06 1.66e-06 1.23e-06 2.31e-07 3.35e-07 7.02e-07 9.21e-07 6.6e-07 7.06e-07 3.34e-07 4.87e-07 2.13e-07 2.83e-07 3.17e-06 4.14e-07 1.96e-07 3.7e-07 3.28e-07 3.98e-07 1.97e-07 2.74e-07