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Genes within 1Mb (chr12:94844564:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -373182 sc-eQTL 6.49e-03 -0.204 0.0741 0.632 B L1
ENSG00000057704 TMCC3 194007 sc-eQTL 2.45e-01 -0.103 0.0883 0.632 B L1
ENSG00000111142 METAP2 -628956 sc-eQTL 3.57e-01 -0.0612 0.0662 0.632 B L1
ENSG00000120798 NR2C1 -229064 sc-eQTL 2.13e-01 0.104 0.0835 0.632 B L1
ENSG00000136014 USP44 -706912 sc-eQTL 9.63e-01 -0.00359 0.0765 0.632 B L1
ENSG00000136040 PLXNC1 695987 sc-eQTL 6.65e-01 -0.0218 0.0502 0.632 B L1
ENSG00000173588 CEP83 384576 sc-eQTL 9.36e-01 0.00511 0.0634 0.632 B L1
ENSG00000180263 FGD6 -372918 sc-eQTL 3.88e-01 -0.0663 0.0765 0.632 B L1
ENSG00000184752 NDUFA12 -159184 sc-eQTL 4.46e-01 0.0279 0.0365 0.632 B L1
ENSG00000028203 VEZT -373182 sc-eQTL 6.32e-01 0.0305 0.0635 0.632 CD4T L1
ENSG00000111142 METAP2 -628956 sc-eQTL 7.73e-01 -0.0159 0.0551 0.632 CD4T L1
ENSG00000120798 NR2C1 -229064 sc-eQTL 4.68e-01 -0.0446 0.0613 0.632 CD4T L1
ENSG00000136014 USP44 -706912 sc-eQTL 2.34e-01 -0.0997 0.0836 0.632 CD4T L1
ENSG00000136040 PLXNC1 695987 sc-eQTL 6.86e-01 0.0218 0.0539 0.632 CD4T L1
ENSG00000173588 CEP83 384576 sc-eQTL 2.53e-02 -0.126 0.0558 0.632 CD4T L1
ENSG00000184752 NDUFA12 -159184 sc-eQTL 1.22e-02 -0.148 0.0584 0.632 CD4T L1
ENSG00000028203 VEZT -373182 sc-eQTL 1.29e-01 -0.114 0.0748 0.632 CD8T L1
ENSG00000057704 TMCC3 194007 sc-eQTL 7.83e-01 0.014 0.0506 0.632 CD8T L1
ENSG00000111142 METAP2 -628956 sc-eQTL 8.02e-01 0.0162 0.0644 0.632 CD8T L1
ENSG00000120798 NR2C1 -229064 sc-eQTL 7.09e-01 0.0307 0.0819 0.632 CD8T L1
ENSG00000136014 USP44 -706912 sc-eQTL 9.29e-01 0.00658 0.0733 0.632 CD8T L1
ENSG00000136040 PLXNC1 695987 sc-eQTL 6.85e-02 -0.127 0.0691 0.632 CD8T L1
ENSG00000173588 CEP83 384576 sc-eQTL 8.48e-01 0.0125 0.0651 0.632 CD8T L1
ENSG00000184752 NDUFA12 -159184 sc-eQTL 3.52e-01 -0.0496 0.0531 0.632 CD8T L1
ENSG00000028203 VEZT -373182 sc-eQTL 4.96e-02 0.175 0.0887 0.631 DC L1
ENSG00000057704 TMCC3 194007 sc-eQTL 3.62e-01 -0.0865 0.0948 0.631 DC L1
ENSG00000111142 METAP2 -628956 sc-eQTL 4.20e-01 -0.0759 0.0939 0.631 DC L1
ENSG00000120798 NR2C1 -229064 sc-eQTL 5.54e-01 -0.0539 0.091 0.631 DC L1
ENSG00000136040 PLXNC1 695987 sc-eQTL 4.34e-01 0.0665 0.0849 0.631 DC L1
ENSG00000173588 CEP83 384576 sc-eQTL 8.23e-01 0.0169 0.0757 0.631 DC L1
ENSG00000180263 FGD6 -372918 sc-eQTL 7.73e-01 -0.0243 0.0842 0.631 DC L1
ENSG00000184752 NDUFA12 -159184 sc-eQTL 4.75e-02 -0.14 0.0703 0.631 DC L1
ENSG00000028203 VEZT -373182 sc-eQTL 5.20e-01 0.0531 0.0825 0.632 Mono L1
ENSG00000057704 TMCC3 194007 sc-eQTL 2.41e-01 -0.0751 0.0639 0.632 Mono L1
ENSG00000111142 METAP2 -628956 sc-eQTL 9.61e-01 0.00321 0.0657 0.632 Mono L1
ENSG00000120798 NR2C1 -229064 sc-eQTL 6.87e-02 -0.142 0.0777 0.632 Mono L1
ENSG00000136040 PLXNC1 695987 sc-eQTL 1.86e-02 0.124 0.0525 0.632 Mono L1
ENSG00000173588 CEP83 384576 sc-eQTL 8.41e-01 -0.0158 0.0786 0.632 Mono L1
ENSG00000180263 FGD6 -372918 sc-eQTL 2.59e-02 -0.155 0.0692 0.632 Mono L1
ENSG00000184752 NDUFA12 -159184 sc-eQTL 3.39e-05 -0.205 0.0483 0.632 Mono L1
ENSG00000028203 VEZT -373182 sc-eQTL 5.04e-01 0.0548 0.0819 0.631 NK L1
ENSG00000057704 TMCC3 194007 sc-eQTL 3.38e-01 0.074 0.0771 0.631 NK L1
ENSG00000111142 METAP2 -628956 sc-eQTL 6.24e-01 -0.0319 0.0648 0.631 NK L1
ENSG00000120798 NR2C1 -229064 sc-eQTL 3.53e-01 0.0713 0.0766 0.631 NK L1
ENSG00000136040 PLXNC1 695987 sc-eQTL 3.67e-01 -0.0571 0.0632 0.631 NK L1
ENSG00000173588 CEP83 384576 sc-eQTL 5.70e-01 -0.0409 0.0719 0.631 NK L1
ENSG00000184752 NDUFA12 -159184 sc-eQTL 4.39e-02 -0.107 0.0526 0.631 NK L1
ENSG00000028203 VEZT -373182 sc-eQTL 8.95e-01 0.0123 0.093 0.632 Other_T L1
ENSG00000057704 TMCC3 194007 sc-eQTL 7.27e-01 -0.0276 0.0791 0.632 Other_T L1
ENSG00000074527 NTN4 -946588 sc-eQTL 6.05e-01 -0.0362 0.07 0.632 Other_T L1
ENSG00000111142 METAP2 -628956 sc-eQTL 5.58e-01 0.0424 0.0722 0.632 Other_T L1
ENSG00000120798 NR2C1 -229064 sc-eQTL 2.84e-01 -0.0966 0.09 0.632 Other_T L1
ENSG00000136040 PLXNC1 695987 sc-eQTL 7.70e-01 0.0214 0.0732 0.632 Other_T L1
ENSG00000173588 CEP83 384576 sc-eQTL 7.17e-01 0.0299 0.0824 0.632 Other_T L1
ENSG00000184752 NDUFA12 -159184 sc-eQTL 4.37e-02 -0.0922 0.0454 0.632 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -373182 sc-eQTL 9.23e-01 -0.00981 0.101 0.625 B_Activated L2
ENSG00000057704 TMCC3 194007 sc-eQTL 9.80e-01 0.00219 0.0865 0.625 B_Activated L2
ENSG00000111142 METAP2 -628956 sc-eQTL 4.74e-01 0.0758 0.106 0.625 B_Activated L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 2.44e-01 -0.118 0.101 0.625 B_Activated L2
ENSG00000136014 USP44 -706912 sc-eQTL 7.13e-01 0.0284 0.0773 0.625 B_Activated L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 4.91e-01 0.0563 0.0816 0.625 B_Activated L2
ENSG00000173588 CEP83 384576 sc-eQTL 5.28e-01 -0.0642 0.102 0.625 B_Activated L2
ENSG00000180263 FGD6 -372918 sc-eQTL 5.07e-03 -0.199 0.0701 0.625 B_Activated L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 6.13e-01 0.0453 0.0896 0.625 B_Activated L2
ENSG00000028203 VEZT -373182 sc-eQTL 8.74e-02 -0.157 0.0916 0.631 B_Intermediate L2
ENSG00000057704 TMCC3 194007 sc-eQTL 1.99e-01 -0.12 0.0929 0.631 B_Intermediate L2
ENSG00000111142 METAP2 -628956 sc-eQTL 8.92e-01 0.0116 0.0851 0.631 B_Intermediate L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 2.05e-01 0.118 0.093 0.631 B_Intermediate L2
ENSG00000136014 USP44 -706912 sc-eQTL 1.71e-01 -0.131 0.0952 0.631 B_Intermediate L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 7.27e-01 0.0275 0.0785 0.631 B_Intermediate L2
ENSG00000173588 CEP83 384576 sc-eQTL 3.60e-01 -0.0797 0.0868 0.631 B_Intermediate L2
ENSG00000180263 FGD6 -372918 sc-eQTL 8.46e-01 0.0166 0.0854 0.631 B_Intermediate L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 2.30e-01 0.0849 0.0704 0.631 B_Intermediate L2
ENSG00000028203 VEZT -373182 sc-eQTL 3.54e-01 -0.0886 0.0954 0.631 B_Memory L2
ENSG00000057704 TMCC3 194007 sc-eQTL 6.24e-01 0.0477 0.097 0.631 B_Memory L2
ENSG00000111142 METAP2 -628956 sc-eQTL 9.01e-01 -0.0116 0.0928 0.631 B_Memory L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 3.10e-01 0.101 0.0995 0.631 B_Memory L2
ENSG00000136014 USP44 -706912 sc-eQTL 3.23e-01 -0.0879 0.0887 0.631 B_Memory L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 8.58e-01 -0.0134 0.0751 0.631 B_Memory L2
ENSG00000173588 CEP83 384576 sc-eQTL 4.05e-01 0.0729 0.0875 0.631 B_Memory L2
ENSG00000180263 FGD6 -372918 sc-eQTL 2.08e-01 -0.111 0.0881 0.631 B_Memory L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 3.93e-01 0.0607 0.071 0.631 B_Memory L2
ENSG00000028203 VEZT -373182 sc-eQTL 8.95e-02 -0.152 0.0892 0.632 B_Naive1 L2
ENSG00000057704 TMCC3 194007 sc-eQTL 9.89e-01 0.00124 0.0908 0.632 B_Naive1 L2
ENSG00000111142 METAP2 -628956 sc-eQTL 1.65e-01 -0.106 0.076 0.632 B_Naive1 L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 9.97e-01 -0.000387 0.0932 0.632 B_Naive1 L2
ENSG00000136014 USP44 -706912 sc-eQTL 7.26e-01 0.0323 0.0919 0.632 B_Naive1 L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 3.70e-01 -0.0692 0.077 0.632 B_Naive1 L2
ENSG00000173588 CEP83 384576 sc-eQTL 9.33e-01 0.00675 0.0797 0.632 B_Naive1 L2
ENSG00000180263 FGD6 -372918 sc-eQTL 7.74e-01 -0.0251 0.0873 0.632 B_Naive1 L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 4.38e-01 0.0395 0.0508 0.632 B_Naive1 L2
ENSG00000028203 VEZT -373182 sc-eQTL 4.12e-01 0.0807 0.0981 0.631 B_Naive2 L2
ENSG00000057704 TMCC3 194007 sc-eQTL 4.88e-02 -0.176 0.089 0.631 B_Naive2 L2
ENSG00000111142 METAP2 -628956 sc-eQTL 4.38e-01 -0.0705 0.0907 0.631 B_Naive2 L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 9.65e-01 0.00432 0.0994 0.631 B_Naive2 L2
ENSG00000136014 USP44 -706912 sc-eQTL 9.59e-01 -0.00462 0.0908 0.631 B_Naive2 L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 9.84e-01 -0.00168 0.084 0.631 B_Naive2 L2
ENSG00000173588 CEP83 384576 sc-eQTL 9.15e-01 -0.00947 0.0887 0.631 B_Naive2 L2
ENSG00000180263 FGD6 -372918 sc-eQTL 8.71e-01 0.0121 0.0744 0.631 B_Naive2 L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 6.43e-01 0.0339 0.0731 0.631 B_Naive2 L2
ENSG00000028203 VEZT -373182 sc-eQTL 7.35e-01 -0.032 0.0942 0.632 CD4_CTL L2
ENSG00000111142 METAP2 -628956 sc-eQTL 6.22e-01 -0.0485 0.0984 0.632 CD4_CTL L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 3.10e-01 -0.1 0.0986 0.632 CD4_CTL L2
ENSG00000136014 USP44 -706912 sc-eQTL 2.29e-01 -0.0942 0.0781 0.632 CD4_CTL L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 6.79e-01 -0.0365 0.088 0.632 CD4_CTL L2
ENSG00000173588 CEP83 384576 sc-eQTL 2.55e-01 -0.102 0.0897 0.632 CD4_CTL L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 1.24e-01 -0.125 0.0806 0.632 CD4_CTL L2
ENSG00000028203 VEZT -373182 sc-eQTL 3.62e-01 0.0658 0.072 0.632 CD4_Naive L2
ENSG00000111142 METAP2 -628956 sc-eQTL 9.44e-01 0.00436 0.0625 0.632 CD4_Naive L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 5.60e-01 -0.0445 0.0762 0.632 CD4_Naive L2
ENSG00000136014 USP44 -706912 sc-eQTL 5.19e-01 -0.0567 0.0877 0.632 CD4_Naive L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 4.72e-01 0.043 0.0597 0.632 CD4_Naive L2
ENSG00000173588 CEP83 384576 sc-eQTL 4.14e-01 -0.0529 0.0646 0.632 CD4_Naive L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 1.59e-02 -0.133 0.0548 0.632 CD4_Naive L2
ENSG00000028203 VEZT -373182 sc-eQTL 4.32e-01 -0.059 0.075 0.632 CD4_TCM L2
ENSG00000111142 METAP2 -628956 sc-eQTL 9.22e-01 -0.00693 0.0704 0.632 CD4_TCM L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 9.24e-01 0.00788 0.0819 0.632 CD4_TCM L2
ENSG00000136014 USP44 -706912 sc-eQTL 4.13e-01 -0.0781 0.0952 0.632 CD4_TCM L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 7.29e-01 -0.0243 0.0701 0.632 CD4_TCM L2
ENSG00000173588 CEP83 384576 sc-eQTL 1.10e-01 -0.119 0.0743 0.632 CD4_TCM L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 8.77e-03 -0.168 0.0634 0.632 CD4_TCM L2
ENSG00000028203 VEZT -373182 sc-eQTL 5.79e-02 -0.185 0.0969 0.632 CD4_TEM L2
ENSG00000111142 METAP2 -628956 sc-eQTL 3.57e-01 -0.0798 0.0864 0.632 CD4_TEM L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 6.52e-01 -0.0411 0.091 0.632 CD4_TEM L2
ENSG00000136014 USP44 -706912 sc-eQTL 8.77e-01 -0.0141 0.0915 0.632 CD4_TEM L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 8.73e-02 -0.133 0.0775 0.632 CD4_TEM L2
ENSG00000173588 CEP83 384576 sc-eQTL 1.45e-01 -0.128 0.0872 0.632 CD4_TEM L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 8.15e-02 -0.138 0.0787 0.632 CD4_TEM L2
ENSG00000028203 VEZT -373182 sc-eQTL 9.69e-02 -0.141 0.0846 0.632 CD8_CTL L2
ENSG00000057704 TMCC3 194007 sc-eQTL 8.92e-01 -0.0102 0.0751 0.632 CD8_CTL L2
ENSG00000111142 METAP2 -628956 sc-eQTL 2.07e-01 0.107 0.0849 0.632 CD8_CTL L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 8.94e-01 0.0125 0.0943 0.632 CD8_CTL L2
ENSG00000136014 USP44 -706912 sc-eQTL 7.24e-01 -0.0319 0.0903 0.632 CD8_CTL L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 6.06e-02 -0.144 0.0764 0.632 CD8_CTL L2
ENSG00000173588 CEP83 384576 sc-eQTL 1.41e-01 -0.125 0.0845 0.632 CD8_CTL L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 2.20e-01 -0.0818 0.0666 0.632 CD8_CTL L2
ENSG00000028203 VEZT -373182 sc-eQTL 4.01e-01 0.0739 0.0877 0.632 CD8_Naive L2
ENSG00000057704 TMCC3 194007 sc-eQTL 4.00e-01 -0.0577 0.0685 0.632 CD8_Naive L2
ENSG00000111142 METAP2 -628956 sc-eQTL 2.64e-01 -0.0887 0.0793 0.632 CD8_Naive L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 9.99e-01 -5.93e-05 0.0882 0.632 CD8_Naive L2
ENSG00000136014 USP44 -706912 sc-eQTL 9.84e-01 -0.00163 0.0796 0.632 CD8_Naive L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 9.88e-01 -0.00117 0.0806 0.632 CD8_Naive L2
ENSG00000173588 CEP83 384576 sc-eQTL 5.90e-01 0.0419 0.0776 0.632 CD8_Naive L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 7.01e-01 -0.0248 0.0643 0.632 CD8_Naive L2
ENSG00000028203 VEZT -373182 sc-eQTL 3.62e-02 -0.198 0.0938 0.623 CD8_TCM L2
ENSG00000057704 TMCC3 194007 sc-eQTL 4.75e-01 -0.0523 0.0731 0.623 CD8_TCM L2
ENSG00000111142 METAP2 -628956 sc-eQTL 3.04e-01 -0.0989 0.096 0.623 CD8_TCM L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 1.70e-01 0.133 0.0964 0.623 CD8_TCM L2
ENSG00000136014 USP44 -706912 sc-eQTL 3.71e-01 -0.0777 0.0867 0.623 CD8_TCM L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 6.10e-01 -0.0468 0.0916 0.623 CD8_TCM L2
ENSG00000173588 CEP83 384576 sc-eQTL 4.26e-01 -0.0749 0.0939 0.623 CD8_TCM L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 2.69e-01 -0.0836 0.0754 0.623 CD8_TCM L2
ENSG00000028203 VEZT -373182 sc-eQTL 5.33e-01 -0.0608 0.0973 0.642 CD8_TEM L2
ENSG00000057704 TMCC3 194007 sc-eQTL 3.11e-01 -0.0847 0.0835 0.642 CD8_TEM L2
ENSG00000111142 METAP2 -628956 sc-eQTL 7.50e-01 -0.0302 0.0945 0.642 CD8_TEM L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 3.40e-01 -0.0949 0.0992 0.642 CD8_TEM L2
ENSG00000136014 USP44 -706912 sc-eQTL 5.64e-01 -0.0476 0.0824 0.642 CD8_TEM L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 4.71e-01 0.0677 0.0938 0.642 CD8_TEM L2
ENSG00000173588 CEP83 384576 sc-eQTL 4.02e-01 -0.0813 0.0968 0.642 CD8_TEM L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 6.08e-01 -0.0425 0.0827 0.642 CD8_TEM L2
ENSG00000028203 VEZT -373182 sc-eQTL 9.71e-01 -0.00354 0.0958 0.63 MAIT L2
ENSG00000057704 TMCC3 194007 sc-eQTL 5.49e-01 -0.0487 0.0811 0.63 MAIT L2
ENSG00000074527 NTN4 -946588 sc-eQTL 9.68e-01 -0.00302 0.074 0.63 MAIT L2
ENSG00000111142 METAP2 -628956 sc-eQTL 8.79e-01 -0.0142 0.0932 0.63 MAIT L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 3.26e-01 -0.0887 0.0901 0.63 MAIT L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 9.18e-02 0.134 0.0789 0.63 MAIT L2
ENSG00000173588 CEP83 384576 sc-eQTL 1.21e-01 0.141 0.0905 0.63 MAIT L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 3.67e-01 -0.0718 0.0794 0.63 MAIT L2
ENSG00000028203 VEZT -373182 sc-eQTL 9.52e-01 -0.00588 0.0969 0.631 NK_CD56bright L2
ENSG00000057704 TMCC3 194007 sc-eQTL 8.52e-01 0.0173 0.0928 0.631 NK_CD56bright L2
ENSG00000111142 METAP2 -628956 sc-eQTL 4.35e-01 0.0745 0.0952 0.631 NK_CD56bright L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 5.05e-01 0.0668 0.1 0.631 NK_CD56bright L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 2.28e-01 -0.0988 0.0817 0.631 NK_CD56bright L2
ENSG00000173588 CEP83 384576 sc-eQTL 8.06e-01 0.0204 0.0831 0.631 NK_CD56bright L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 9.86e-01 -0.00143 0.0796 0.631 NK_CD56bright L2
ENSG00000028203 VEZT -373182 sc-eQTL 8.68e-01 0.0153 0.0916 0.631 NK_CD56dim L2
ENSG00000057704 TMCC3 194007 sc-eQTL 8.79e-01 -0.0122 0.0797 0.631 NK_CD56dim L2
ENSG00000111142 METAP2 -628956 sc-eQTL 4.81e-01 -0.0583 0.0825 0.631 NK_CD56dim L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 1.84e-01 0.112 0.0838 0.631 NK_CD56dim L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 9.37e-01 0.00587 0.074 0.631 NK_CD56dim L2
ENSG00000173588 CEP83 384576 sc-eQTL 7.85e-02 -0.15 0.0849 0.631 NK_CD56dim L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 9.10e-03 -0.154 0.0587 0.631 NK_CD56dim L2
ENSG00000028203 VEZT -373182 sc-eQTL 5.70e-01 0.0579 0.102 0.639 NK_HLA L2
ENSG00000057704 TMCC3 194007 sc-eQTL 6.74e-01 0.0379 0.0901 0.639 NK_HLA L2
ENSG00000111142 METAP2 -628956 sc-eQTL 9.15e-01 0.0101 0.0948 0.639 NK_HLA L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 5.98e-01 0.0528 0.0999 0.639 NK_HLA L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 7.20e-01 -0.0293 0.0817 0.639 NK_HLA L2
ENSG00000173588 CEP83 384576 sc-eQTL 6.33e-02 0.174 0.093 0.639 NK_HLA L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 4.73e-01 -0.0607 0.0843 0.639 NK_HLA L2
ENSG00000028203 VEZT -373182 sc-eQTL 5.91e-01 0.0457 0.0848 0.631 NK_cytokine L2
ENSG00000057704 TMCC3 194007 sc-eQTL 5.49e-02 0.167 0.0863 0.631 NK_cytokine L2
ENSG00000111142 METAP2 -628956 sc-eQTL 5.55e-01 -0.051 0.0861 0.631 NK_cytokine L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 1.67e-01 -0.123 0.0888 0.631 NK_cytokine L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 3.64e-01 -0.07 0.077 0.631 NK_cytokine L2
ENSG00000173588 CEP83 384576 sc-eQTL 6.73e-01 0.0374 0.0886 0.631 NK_cytokine L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 8.33e-01 -0.013 0.0618 0.631 NK_cytokine L2
ENSG00000028203 VEZT -373182 sc-eQTL 1.38e-01 -0.178 0.119 0.641 PB L2
ENSG00000057704 TMCC3 194007 sc-eQTL 4.89e-01 0.075 0.108 0.641 PB L2
ENSG00000111142 METAP2 -628956 sc-eQTL 1.58e-01 0.169 0.119 0.641 PB L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 3.86e-01 0.0989 0.114 0.641 PB L2
ENSG00000136014 USP44 -706912 sc-eQTL 7.20e-01 -0.0386 0.107 0.641 PB L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 9.52e-01 0.0067 0.111 0.641 PB L2
ENSG00000173588 CEP83 384576 sc-eQTL 3.49e-01 0.108 0.115 0.641 PB L2
ENSG00000180263 FGD6 -372918 sc-eQTL 6.76e-01 -0.0402 0.0959 0.641 PB L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 8.86e-01 0.00965 0.0674 0.641 PB L2
ENSG00000028203 VEZT -373182 sc-eQTL 7.04e-02 0.161 0.0885 0.63 Pro_T L2
ENSG00000057704 TMCC3 194007 sc-eQTL 3.11e-01 -0.0804 0.0793 0.63 Pro_T L2
ENSG00000074527 NTN4 -946588 sc-eQTL 9.62e-01 -0.00309 0.0648 0.63 Pro_T L2
ENSG00000111142 METAP2 -628956 sc-eQTL 6.42e-01 -0.0356 0.0765 0.63 Pro_T L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 1.58e-02 -0.222 0.091 0.63 Pro_T L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 1.90e-01 -0.118 0.09 0.63 Pro_T L2
ENSG00000173588 CEP83 384576 sc-eQTL 3.89e-01 0.0771 0.0893 0.63 Pro_T L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 7.99e-01 -0.0143 0.0559 0.63 Pro_T L2
ENSG00000028203 VEZT -373182 sc-eQTL 6.07e-01 0.0475 0.0921 0.632 Treg L2
ENSG00000111142 METAP2 -628956 sc-eQTL 7.85e-02 0.153 0.0864 0.632 Treg L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 1.47e-01 -0.133 0.0916 0.632 Treg L2
ENSG00000136014 USP44 -706912 sc-eQTL 4.27e-01 -0.0654 0.0823 0.632 Treg L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 1.07e-01 0.136 0.0844 0.632 Treg L2
ENSG00000173588 CEP83 384576 sc-eQTL 2.57e-01 -0.103 0.0906 0.632 Treg L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 2.89e-01 -0.0738 0.0695 0.632 Treg L2
ENSG00000028203 VEZT -373182 sc-eQTL 4.34e-02 0.187 0.0921 0.629 cDC L2
ENSG00000057704 TMCC3 194007 sc-eQTL 8.51e-01 -0.0189 0.1 0.629 cDC L2
ENSG00000111142 METAP2 -628956 sc-eQTL 3.45e-01 -0.0964 0.102 0.629 cDC L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 3.80e-01 -0.0863 0.0981 0.629 cDC L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 4.26e-01 0.0698 0.0875 0.629 cDC L2
ENSG00000173588 CEP83 384576 sc-eQTL 1.18e-01 -0.128 0.0817 0.629 cDC L2
ENSG00000180263 FGD6 -372918 sc-eQTL 9.11e-01 0.0106 0.0945 0.629 cDC L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 1.20e-01 -0.125 0.0798 0.629 cDC L2
ENSG00000028203 VEZT -373182 sc-eQTL 5.77e-01 0.0511 0.0915 0.632 cMono_IL1B L2
ENSG00000057704 TMCC3 194007 sc-eQTL 2.31e-01 -0.0862 0.0717 0.632 cMono_IL1B L2
ENSG00000111142 METAP2 -628956 sc-eQTL 7.02e-01 -0.0302 0.079 0.632 cMono_IL1B L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 6.29e-02 -0.154 0.0826 0.632 cMono_IL1B L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 5.33e-02 0.122 0.0629 0.632 cMono_IL1B L2
ENSG00000173588 CEP83 384576 sc-eQTL 4.50e-01 0.0653 0.0863 0.632 cMono_IL1B L2
ENSG00000180263 FGD6 -372918 sc-eQTL 1.30e-02 -0.182 0.0727 0.632 cMono_IL1B L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 8.87e-04 -0.172 0.051 0.632 cMono_IL1B L2
ENSG00000028203 VEZT -373182 sc-eQTL 5.95e-01 -0.0494 0.0928 0.632 cMono_S100A L2
ENSG00000057704 TMCC3 194007 sc-eQTL 4.57e-01 -0.0605 0.0812 0.632 cMono_S100A L2
ENSG00000111142 METAP2 -628956 sc-eQTL 7.61e-01 0.0273 0.0897 0.632 cMono_S100A L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 2.02e-01 -0.113 0.0881 0.632 cMono_S100A L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 3.14e-02 0.142 0.0655 0.632 cMono_S100A L2
ENSG00000173588 CEP83 384576 sc-eQTL 7.43e-02 -0.167 0.093 0.632 cMono_S100A L2
ENSG00000180263 FGD6 -372918 sc-eQTL 6.75e-01 -0.036 0.0858 0.632 cMono_S100A L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 9.30e-05 -0.235 0.0589 0.632 cMono_S100A L2
ENSG00000028203 VEZT -373182 sc-eQTL 4.74e-01 -0.0795 0.111 0.621 gdT L2
ENSG00000057704 TMCC3 194007 sc-eQTL 8.69e-01 -0.0141 0.0849 0.621 gdT L2
ENSG00000074527 NTN4 -946588 sc-eQTL 4.14e-02 -0.171 0.0831 0.621 gdT L2
ENSG00000111142 METAP2 -628956 sc-eQTL 1.39e-02 0.257 0.103 0.621 gdT L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 2.64e-01 -0.126 0.112 0.621 gdT L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 4.82e-01 -0.0754 0.107 0.621 gdT L2
ENSG00000173588 CEP83 384576 sc-eQTL 4.12e-01 -0.0858 0.104 0.621 gdT L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 4.49e-01 0.0688 0.0908 0.621 gdT L2
ENSG00000028203 VEZT -373182 sc-eQTL 2.33e-01 -0.118 0.0985 0.629 intMono L2
ENSG00000057704 TMCC3 194007 sc-eQTL 8.10e-01 -0.023 0.0958 0.629 intMono L2
ENSG00000111142 METAP2 -628956 sc-eQTL 2.34e-01 0.12 0.1 0.629 intMono L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 5.96e-01 0.0498 0.0938 0.629 intMono L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 1.87e-01 0.107 0.0805 0.629 intMono L2
ENSG00000173588 CEP83 384576 sc-eQTL 3.92e-01 0.0833 0.0972 0.629 intMono L2
ENSG00000180263 FGD6 -372918 sc-eQTL 1.49e-01 -0.126 0.087 0.629 intMono L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 3.48e-03 -0.181 0.0611 0.629 intMono L2
ENSG00000028203 VEZT -373182 sc-eQTL 7.87e-01 -0.0246 0.0906 0.624 ncMono L2
ENSG00000057704 TMCC3 194007 sc-eQTL 8.75e-01 -0.0138 0.0875 0.624 ncMono L2
ENSG00000111142 METAP2 -628956 sc-eQTL 4.51e-01 -0.0719 0.0951 0.624 ncMono L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 8.00e-01 -0.024 0.0945 0.624 ncMono L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 5.79e-01 -0.0334 0.0602 0.624 ncMono L2
ENSG00000173588 CEP83 384576 sc-eQTL 9.14e-01 -0.0102 0.0942 0.624 ncMono L2
ENSG00000180263 FGD6 -372918 sc-eQTL 9.39e-01 0.00682 0.0895 0.624 ncMono L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 1.10e-01 -0.127 0.0791 0.624 ncMono L2
ENSG00000028203 VEZT -373182 sc-eQTL 3.59e-01 -0.0921 0.1 0.599 pDC L2
ENSG00000057704 TMCC3 194007 sc-eQTL 7.98e-01 -0.0251 0.0978 0.599 pDC L2
ENSG00000111142 METAP2 -628956 sc-eQTL 4.75e-01 -0.0734 0.102 0.599 pDC L2
ENSG00000120798 NR2C1 -229064 sc-eQTL 1.49e-01 -0.146 0.101 0.599 pDC L2
ENSG00000136040 PLXNC1 695987 sc-eQTL 7.82e-01 0.0271 0.0974 0.599 pDC L2
ENSG00000173588 CEP83 384576 sc-eQTL 1.98e-02 0.242 0.103 0.599 pDC L2
ENSG00000180263 FGD6 -372918 sc-eQTL 4.75e-01 -0.0629 0.088 0.599 pDC L2
ENSG00000184752 NDUFA12 -159184 sc-eQTL 1.53e-01 -0.124 0.0863 0.599 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -373182 sc-eQTL 2.93e-02 -0.199 0.0906 0.632 B_Memory LOneK1K
ENSG00000057704 TMCC3 194007 sc-eQTL 8.51e-01 -0.0182 0.0967 0.632 B_Memory LOneK1K
ENSG00000111142 METAP2 -628956 sc-eQTL 7.56e-01 0.0266 0.0853 0.632 B_Memory LOneK1K
ENSG00000120798 NR2C1 -229064 sc-eQTL 1.23e-01 0.151 0.0975 0.632 B_Memory LOneK1K
ENSG00000136014 USP44 -706912 sc-eQTL 4.05e-01 -0.0756 0.0906 0.632 B_Memory LOneK1K
ENSG00000136040 PLXNC1 695987 sc-eQTL 8.18e-01 0.0135 0.0585 0.632 B_Memory LOneK1K
ENSG00000173588 CEP83 384576 sc-eQTL 5.98e-01 -0.0431 0.0816 0.632 B_Memory LOneK1K
ENSG00000180263 FGD6 -372918 sc-eQTL 3.57e-01 -0.0748 0.0811 0.632 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -159184 sc-eQTL 1.57e-01 0.0793 0.0558 0.632 B_Memory LOneK1K
ENSG00000028203 VEZT -373182 sc-eQTL 3.08e-01 -0.0865 0.0847 0.632 B_Naive LOneK1K
ENSG00000057704 TMCC3 194007 sc-eQTL 2.93e-01 -0.0905 0.0859 0.632 B_Naive LOneK1K
ENSG00000111142 METAP2 -628956 sc-eQTL 5.74e-02 -0.134 0.0703 0.632 B_Naive LOneK1K
ENSG00000120798 NR2C1 -229064 sc-eQTL 6.88e-01 0.037 0.0921 0.632 B_Naive LOneK1K
ENSG00000136014 USP44 -706912 sc-eQTL 7.77e-01 0.0232 0.0818 0.632 B_Naive LOneK1K
ENSG00000136040 PLXNC1 695987 sc-eQTL 5.64e-01 -0.0403 0.0698 0.632 B_Naive LOneK1K
ENSG00000173588 CEP83 384576 sc-eQTL 9.94e-01 0.00053 0.0729 0.632 B_Naive LOneK1K
ENSG00000180263 FGD6 -372918 sc-eQTL 5.73e-01 -0.0507 0.0898 0.632 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -159184 sc-eQTL 6.33e-01 0.0237 0.0496 0.632 B_Naive LOneK1K
ENSG00000028203 VEZT -373182 sc-eQTL 4.47e-01 0.0636 0.0835 0.632 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 194007 sc-eQTL 1.16e-01 -0.104 0.0658 0.632 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -628956 sc-eQTL 9.74e-01 0.00229 0.0715 0.632 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -229064 sc-eQTL 1.43e-02 -0.189 0.0767 0.632 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 695987 sc-eQTL 1.87e-02 0.137 0.0579 0.632 CD14_Mono LOneK1K
ENSG00000173588 CEP83 384576 sc-eQTL 5.53e-01 -0.0476 0.0799 0.632 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -372918 sc-eQTL 1.67e-02 -0.172 0.0713 0.632 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -159184 sc-eQTL 3.07e-05 -0.203 0.0476 0.632 CD14_Mono LOneK1K
ENSG00000028203 VEZT -373182 sc-eQTL 6.38e-01 -0.0442 0.0938 0.629 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 194007 sc-eQTL 8.74e-01 -0.0138 0.087 0.629 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -628956 sc-eQTL 8.44e-01 0.017 0.0859 0.629 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -229064 sc-eQTL 9.47e-01 -0.00636 0.0962 0.629 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 695987 sc-eQTL 8.04e-01 0.0138 0.0555 0.629 CD16_Mono LOneK1K
ENSG00000173588 CEP83 384576 sc-eQTL 3.17e-01 0.0923 0.092 0.629 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -372918 sc-eQTL 2.38e-01 -0.0929 0.0785 0.629 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -159184 sc-eQTL 2.82e-02 -0.137 0.0621 0.629 CD16_Mono LOneK1K
ENSG00000028203 VEZT -373182 sc-eQTL 4.22e-01 0.0679 0.0844 0.631 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 194007 sc-eQTL 4.87e-01 0.0549 0.0788 0.631 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -628956 sc-eQTL 4.42e-01 -0.0519 0.0674 0.631 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -229064 sc-eQTL 6.28e-01 0.0371 0.0765 0.631 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 695987 sc-eQTL 7.55e-01 -0.0209 0.0671 0.631 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 384576 sc-eQTL 4.36e-01 -0.0589 0.0754 0.631 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -159184 sc-eQTL 3.14e-02 -0.119 0.0548 0.631 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000028203 VEZT -373182 eQTL 0.00514 -0.0404 0.0144 0.0 0.0 0.352
ENSG00000111142 METAP2 -628956 eQTL 0.0254 0.0203 0.00907 0.0 0.0 0.352
ENSG00000180263 FGD6 -372918 eQTL 0.00884 -0.0515 0.0196 0.0 0.0 0.352
ENSG00000184752 NDUFA12 -159184 eQTL 8.02e-11 -0.117 0.0178 0.00193 0.0 0.352

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000184752 NDUFA12 -159184 4.39e-06 4.89e-06 3.17e-07 2.44e-06 4.83e-07 8.89e-07 2.45e-06 6.11e-07 2.33e-06 1.19e-06 3.13e-06 1.77e-06 5.05e-06 2.34e-06 1.07e-06 2.03e-06 1.37e-06 2.19e-06 1.13e-06 1.19e-06 1.12e-06 3.15e-06 2.69e-06 9.95e-07 4.61e-06 1.27e-06 1.6e-06 1.84e-06 2.54e-06 2.24e-06 2.04e-06 3.79e-07 3.71e-07 1.12e-06 1.75e-06 9.21e-07 7.91e-07 3.36e-07 1.03e-06 3.52e-07 2.58e-07 4.17e-06 3.99e-07 1.25e-07 3.89e-07 3.62e-07 3.7e-07 1.95e-07 2.71e-07