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Genes within 1Mb (chr12:94840050:CCT:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -377696 sc-eQTL 5.92e-02 0.153 0.0808 0.299 B L1
ENSG00000057704 TMCC3 189493 sc-eQTL 3.87e-01 0.083 0.0956 0.299 B L1
ENSG00000111142 METAP2 -633470 sc-eQTL 4.25e-01 0.0572 0.0716 0.299 B L1
ENSG00000120798 NR2C1 -233578 sc-eQTL 1.95e-01 -0.117 0.0903 0.299 B L1
ENSG00000136014 USP44 -711426 sc-eQTL 7.75e-01 0.0237 0.0827 0.299 B L1
ENSG00000136040 PLXNC1 691473 sc-eQTL 9.23e-01 -0.00529 0.0543 0.299 B L1
ENSG00000173588 CEP83 380062 sc-eQTL 7.01e-01 0.0263 0.0685 0.299 B L1
ENSG00000180263 FGD6 -377432 sc-eQTL 1.57e-01 0.117 0.0825 0.299 B L1
ENSG00000184752 NDUFA12 -163698 sc-eQTL 5.45e-01 -0.0239 0.0395 0.299 B L1
ENSG00000028203 VEZT -377696 sc-eQTL 5.85e-01 -0.0371 0.0679 0.299 CD4T L1
ENSG00000111142 METAP2 -633470 sc-eQTL 8.22e-01 0.0133 0.0589 0.299 CD4T L1
ENSG00000120798 NR2C1 -233578 sc-eQTL 9.76e-02 0.109 0.0652 0.299 CD4T L1
ENSG00000136014 USP44 -711426 sc-eQTL 2.35e-01 0.106 0.0894 0.299 CD4T L1
ENSG00000136040 PLXNC1 691473 sc-eQTL 9.18e-01 0.00595 0.0577 0.299 CD4T L1
ENSG00000173588 CEP83 380062 sc-eQTL 3.81e-02 0.125 0.0598 0.299 CD4T L1
ENSG00000184752 NDUFA12 -163698 sc-eQTL 8.98e-04 0.208 0.0617 0.299 CD4T L1
ENSG00000028203 VEZT -377696 sc-eQTL 6.58e-01 0.0357 0.0806 0.299 CD8T L1
ENSG00000057704 TMCC3 189493 sc-eQTL 5.44e-01 0.0329 0.0541 0.299 CD8T L1
ENSG00000111142 METAP2 -633470 sc-eQTL 9.99e-01 -0.000102 0.069 0.299 CD8T L1
ENSG00000120798 NR2C1 -233578 sc-eQTL 5.26e-01 -0.0556 0.0876 0.299 CD8T L1
ENSG00000136014 USP44 -711426 sc-eQTL 7.80e-01 -0.0219 0.0785 0.299 CD8T L1
ENSG00000136040 PLXNC1 691473 sc-eQTL 1.45e-01 0.109 0.0743 0.299 CD8T L1
ENSG00000173588 CEP83 380062 sc-eQTL 9.83e-01 0.00149 0.0697 0.299 CD8T L1
ENSG00000184752 NDUFA12 -163698 sc-eQTL 1.67e-01 0.0788 0.0568 0.299 CD8T L1
ENSG00000028203 VEZT -377696 sc-eQTL 7.67e-02 -0.17 0.0955 0.3 DC L1
ENSG00000057704 TMCC3 189493 sc-eQTL 1.90e-01 0.134 0.102 0.3 DC L1
ENSG00000111142 METAP2 -633470 sc-eQTL 2.93e-01 0.106 0.101 0.3 DC L1
ENSG00000120798 NR2C1 -233578 sc-eQTL 4.41e-01 0.0754 0.0977 0.3 DC L1
ENSG00000136040 PLXNC1 691473 sc-eQTL 6.46e-01 -0.0419 0.0912 0.3 DC L1
ENSG00000173588 CEP83 380062 sc-eQTL 8.42e-01 0.0162 0.0813 0.3 DC L1
ENSG00000180263 FGD6 -377432 sc-eQTL 9.56e-01 -0.00498 0.0905 0.3 DC L1
ENSG00000184752 NDUFA12 -163698 sc-eQTL 7.33e-03 0.203 0.0748 0.3 DC L1
ENSG00000028203 VEZT -377696 sc-eQTL 2.05e-01 -0.112 0.0877 0.299 Mono L1
ENSG00000057704 TMCC3 189493 sc-eQTL 3.96e-02 0.14 0.0678 0.299 Mono L1
ENSG00000111142 METAP2 -633470 sc-eQTL 8.69e-01 0.0115 0.0701 0.299 Mono L1
ENSG00000120798 NR2C1 -233578 sc-eQTL 5.97e-02 0.157 0.0829 0.299 Mono L1
ENSG00000136040 PLXNC1 691473 sc-eQTL 1.16e-01 -0.0892 0.0564 0.299 Mono L1
ENSG00000173588 CEP83 380062 sc-eQTL 2.31e-01 -0.1 0.0836 0.299 Mono L1
ENSG00000180263 FGD6 -377432 sc-eQTL 1.63e-01 0.104 0.0744 0.299 Mono L1
ENSG00000184752 NDUFA12 -163698 sc-eQTL 1.47e-05 0.228 0.0513 0.299 Mono L1
ENSG00000028203 VEZT -377696 sc-eQTL 5.76e-01 -0.0497 0.0886 0.3 NK L1
ENSG00000057704 TMCC3 189493 sc-eQTL 9.73e-01 0.00283 0.0836 0.3 NK L1
ENSG00000111142 METAP2 -633470 sc-eQTL 4.45e-01 0.0536 0.07 0.3 NK L1
ENSG00000120798 NR2C1 -233578 sc-eQTL 6.20e-01 -0.0412 0.083 0.3 NK L1
ENSG00000136040 PLXNC1 691473 sc-eQTL 4.71e-01 0.0493 0.0684 0.3 NK L1
ENSG00000173588 CEP83 380062 sc-eQTL 3.43e-01 0.0738 0.0776 0.3 NK L1
ENSG00000184752 NDUFA12 -163698 sc-eQTL 8.14e-03 0.151 0.0564 0.3 NK L1
ENSG00000028203 VEZT -377696 sc-eQTL 1.41e-01 -0.146 0.0989 0.299 Other_T L1
ENSG00000057704 TMCC3 189493 sc-eQTL 5.40e-01 0.0519 0.0846 0.299 Other_T L1
ENSG00000074527 NTN4 -951102 sc-eQTL 5.14e-02 0.145 0.0742 0.299 Other_T L1
ENSG00000111142 METAP2 -633470 sc-eQTL 5.56e-01 0.0455 0.0772 0.299 Other_T L1
ENSG00000120798 NR2C1 -233578 sc-eQTL 2.18e-01 0.119 0.0961 0.299 Other_T L1
ENSG00000136040 PLXNC1 691473 sc-eQTL 9.75e-01 -0.00246 0.0783 0.299 Other_T L1
ENSG00000173588 CEP83 380062 sc-eQTL 4.81e-01 -0.0621 0.088 0.299 Other_T L1
ENSG00000184752 NDUFA12 -163698 sc-eQTL 3.22e-02 0.105 0.0485 0.299 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -377696 sc-eQTL 9.71e-01 -0.00394 0.108 0.306 B_Activated L2
ENSG00000057704 TMCC3 189493 sc-eQTL 4.75e-01 -0.0661 0.0923 0.306 B_Activated L2
ENSG00000111142 METAP2 -633470 sc-eQTL 5.64e-01 -0.0652 0.113 0.306 B_Activated L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 3.23e-01 0.107 0.108 0.306 B_Activated L2
ENSG00000136014 USP44 -711426 sc-eQTL 9.32e-01 0.00707 0.0827 0.306 B_Activated L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 6.84e-01 -0.0355 0.0873 0.306 B_Activated L2
ENSG00000173588 CEP83 380062 sc-eQTL 1.34e-01 0.163 0.108 0.306 B_Activated L2
ENSG00000180263 FGD6 -377432 sc-eQTL 1.26e-01 0.117 0.0761 0.306 B_Activated L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 3.54e-01 -0.0888 0.0956 0.306 B_Activated L2
ENSG00000028203 VEZT -377696 sc-eQTL 5.52e-01 0.058 0.0972 0.3 B_Intermediate L2
ENSG00000057704 TMCC3 189493 sc-eQTL 2.02e-01 0.126 0.0981 0.3 B_Intermediate L2
ENSG00000111142 METAP2 -633470 sc-eQTL 7.69e-01 0.0264 0.0898 0.3 B_Intermediate L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 9.10e-02 -0.166 0.0978 0.3 B_Intermediate L2
ENSG00000136014 USP44 -711426 sc-eQTL 1.03e-01 0.164 0.1 0.3 B_Intermediate L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 5.61e-01 -0.0482 0.0828 0.3 B_Intermediate L2
ENSG00000173588 CEP83 380062 sc-eQTL 3.05e-01 0.0941 0.0916 0.3 B_Intermediate L2
ENSG00000180263 FGD6 -377432 sc-eQTL 8.92e-01 0.0122 0.0901 0.3 B_Intermediate L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 5.18e-01 -0.0483 0.0745 0.3 B_Intermediate L2
ENSG00000028203 VEZT -377696 sc-eQTL 4.60e-01 0.0762 0.103 0.3 B_Memory L2
ENSG00000057704 TMCC3 189493 sc-eQTL 7.32e-01 0.0357 0.104 0.3 B_Memory L2
ENSG00000111142 METAP2 -633470 sc-eQTL 9.54e-01 -0.00582 0.0999 0.3 B_Memory L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 1.92e-01 -0.14 0.107 0.3 B_Memory L2
ENSG00000136014 USP44 -711426 sc-eQTL 1.35e-01 0.143 0.0951 0.3 B_Memory L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 6.27e-01 0.0393 0.0808 0.3 B_Memory L2
ENSG00000173588 CEP83 380062 sc-eQTL 7.73e-01 -0.0273 0.0943 0.3 B_Memory L2
ENSG00000180263 FGD6 -377432 sc-eQTL 2.69e-02 0.21 0.094 0.3 B_Memory L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 8.58e-01 -0.0138 0.0765 0.3 B_Memory L2
ENSG00000028203 VEZT -377696 sc-eQTL 3.31e-01 0.0946 0.0971 0.299 B_Naive1 L2
ENSG00000057704 TMCC3 189493 sc-eQTL 6.29e-01 -0.0476 0.0983 0.299 B_Naive1 L2
ENSG00000111142 METAP2 -633470 sc-eQTL 4.57e-02 0.165 0.082 0.299 B_Naive1 L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 4.48e-01 0.0766 0.101 0.299 B_Naive1 L2
ENSG00000136014 USP44 -711426 sc-eQTL 4.00e-01 -0.0838 0.0994 0.299 B_Naive1 L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 7.57e-01 0.0259 0.0836 0.299 B_Naive1 L2
ENSG00000173588 CEP83 380062 sc-eQTL 8.47e-01 -0.0167 0.0863 0.299 B_Naive1 L2
ENSG00000180263 FGD6 -377432 sc-eQTL 8.16e-01 0.0221 0.0946 0.299 B_Naive1 L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 2.29e-01 -0.0663 0.0549 0.299 B_Naive1 L2
ENSG00000028203 VEZT -377696 sc-eQTL 2.08e-01 -0.132 0.105 0.3 B_Naive2 L2
ENSG00000057704 TMCC3 189493 sc-eQTL 2.06e-03 0.293 0.094 0.3 B_Naive2 L2
ENSG00000111142 METAP2 -633470 sc-eQTL 8.46e-01 0.0189 0.0972 0.3 B_Naive2 L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 2.84e-01 -0.114 0.106 0.3 B_Naive2 L2
ENSG00000136014 USP44 -711426 sc-eQTL 9.36e-01 0.00777 0.0972 0.3 B_Naive2 L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 5.16e-01 -0.0585 0.0899 0.3 B_Naive2 L2
ENSG00000173588 CEP83 380062 sc-eQTL 7.73e-01 0.0275 0.0949 0.3 B_Naive2 L2
ENSG00000180263 FGD6 -377432 sc-eQTL 5.56e-01 0.0469 0.0796 0.3 B_Naive2 L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 8.38e-01 -0.016 0.0782 0.3 B_Naive2 L2
ENSG00000028203 VEZT -377696 sc-eQTL 9.48e-01 -0.00665 0.102 0.302 CD4_CTL L2
ENSG00000111142 METAP2 -633470 sc-eQTL 7.35e-01 0.036 0.106 0.302 CD4_CTL L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 3.26e-02 0.227 0.105 0.302 CD4_CTL L2
ENSG00000136014 USP44 -711426 sc-eQTL 5.93e-01 0.0453 0.0845 0.302 CD4_CTL L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 6.48e-01 0.0434 0.095 0.302 CD4_CTL L2
ENSG00000173588 CEP83 380062 sc-eQTL 6.27e-01 0.0472 0.0971 0.302 CD4_CTL L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 9.48e-02 0.146 0.0869 0.302 CD4_CTL L2
ENSG00000028203 VEZT -377696 sc-eQTL 5.53e-01 -0.0458 0.077 0.299 CD4_Naive L2
ENSG00000111142 METAP2 -633470 sc-eQTL 7.64e-01 0.0201 0.0667 0.299 CD4_Naive L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 1.30e-01 0.123 0.081 0.299 CD4_Naive L2
ENSG00000136014 USP44 -711426 sc-eQTL 5.21e-01 0.0603 0.0937 0.299 CD4_Naive L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 8.65e-01 -0.0109 0.0639 0.299 CD4_Naive L2
ENSG00000173588 CEP83 380062 sc-eQTL 5.51e-01 0.0412 0.0691 0.299 CD4_Naive L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 2.55e-03 0.177 0.0581 0.299 CD4_Naive L2
ENSG00000028203 VEZT -377696 sc-eQTL 8.90e-01 -0.0113 0.0812 0.299 CD4_TCM L2
ENSG00000111142 METAP2 -633470 sc-eQTL 8.05e-01 -0.0188 0.0761 0.299 CD4_TCM L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 5.32e-01 0.0554 0.0885 0.299 CD4_TCM L2
ENSG00000136014 USP44 -711426 sc-eQTL 4.63e-01 0.0758 0.103 0.299 CD4_TCM L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 5.40e-01 0.0465 0.0757 0.299 CD4_TCM L2
ENSG00000173588 CEP83 380062 sc-eQTL 9.15e-02 0.136 0.0803 0.299 CD4_TCM L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 2.70e-03 0.207 0.0682 0.299 CD4_TCM L2
ENSG00000028203 VEZT -377696 sc-eQTL 2.35e-01 0.124 0.104 0.299 CD4_TEM L2
ENSG00000111142 METAP2 -633470 sc-eQTL 3.68e-01 0.0835 0.0925 0.299 CD4_TEM L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 8.77e-01 0.015 0.0973 0.299 CD4_TEM L2
ENSG00000136014 USP44 -711426 sc-eQTL 1.88e-01 0.129 0.0974 0.299 CD4_TEM L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 1.08e-01 0.134 0.083 0.299 CD4_TEM L2
ENSG00000173588 CEP83 380062 sc-eQTL 1.37e-01 0.139 0.0933 0.299 CD4_TEM L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 1.74e-02 0.201 0.0836 0.299 CD4_TEM L2
ENSG00000028203 VEZT -377696 sc-eQTL 5.28e-01 0.0579 0.0916 0.299 CD8_CTL L2
ENSG00000057704 TMCC3 189493 sc-eQTL 5.09e-01 0.0534 0.0807 0.299 CD8_CTL L2
ENSG00000111142 METAP2 -633470 sc-eQTL 1.24e-01 -0.141 0.0912 0.299 CD8_CTL L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 9.82e-01 -0.00225 0.101 0.299 CD8_CTL L2
ENSG00000136014 USP44 -711426 sc-eQTL 9.91e-01 -0.00109 0.0972 0.299 CD8_CTL L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 5.23e-02 0.16 0.0822 0.299 CD8_CTL L2
ENSG00000173588 CEP83 380062 sc-eQTL 1.83e-01 0.121 0.0909 0.299 CD8_CTL L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 3.05e-01 0.0737 0.0717 0.299 CD8_CTL L2
ENSG00000028203 VEZT -377696 sc-eQTL 7.35e-02 -0.168 0.0932 0.299 CD8_Naive L2
ENSG00000057704 TMCC3 189493 sc-eQTL 1.21e-01 0.113 0.0729 0.299 CD8_Naive L2
ENSG00000111142 METAP2 -633470 sc-eQTL 2.04e-01 0.108 0.0846 0.299 CD8_Naive L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 4.00e-01 -0.0793 0.0941 0.299 CD8_Naive L2
ENSG00000136014 USP44 -711426 sc-eQTL 7.16e-01 0.031 0.0851 0.299 CD8_Naive L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 8.40e-01 0.0174 0.0861 0.299 CD8_Naive L2
ENSG00000173588 CEP83 380062 sc-eQTL 4.64e-01 -0.0609 0.0829 0.299 CD8_Naive L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 4.46e-01 0.0525 0.0687 0.299 CD8_Naive L2
ENSG00000028203 VEZT -377696 sc-eQTL 1.16e-01 0.161 0.102 0.306 CD8_TCM L2
ENSG00000057704 TMCC3 189493 sc-eQTL 3.54e-01 0.0735 0.079 0.306 CD8_TCM L2
ENSG00000111142 METAP2 -633470 sc-eQTL 3.03e-01 0.107 0.104 0.306 CD8_TCM L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 3.39e-01 -0.1 0.105 0.306 CD8_TCM L2
ENSG00000136014 USP44 -711426 sc-eQTL 5.00e-01 0.0634 0.094 0.306 CD8_TCM L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 7.75e-01 -0.0284 0.0992 0.306 CD8_TCM L2
ENSG00000173588 CEP83 380062 sc-eQTL 1.18e-01 0.159 0.101 0.306 CD8_TCM L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 6.83e-01 0.0335 0.0819 0.306 CD8_TCM L2
ENSG00000028203 VEZT -377696 sc-eQTL 6.73e-01 0.0436 0.103 0.295 CD8_TEM L2
ENSG00000057704 TMCC3 189493 sc-eQTL 2.91e-01 0.0936 0.0884 0.295 CD8_TEM L2
ENSG00000111142 METAP2 -633470 sc-eQTL 2.69e-01 0.111 0.0999 0.295 CD8_TEM L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 9.15e-01 0.0113 0.105 0.295 CD8_TEM L2
ENSG00000136014 USP44 -711426 sc-eQTL 8.61e-01 0.0154 0.0875 0.295 CD8_TEM L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 7.11e-01 -0.037 0.0996 0.295 CD8_TEM L2
ENSG00000173588 CEP83 380062 sc-eQTL 9.94e-01 -0.000724 0.103 0.295 CD8_TEM L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 6.37e-01 0.0415 0.0877 0.295 CD8_TEM L2
ENSG00000028203 VEZT -377696 sc-eQTL 2.13e-01 -0.129 0.103 0.301 MAIT L2
ENSG00000057704 TMCC3 189493 sc-eQTL 4.07e-01 0.0726 0.0875 0.301 MAIT L2
ENSG00000074527 NTN4 -951102 sc-eQTL 2.50e-01 0.092 0.0797 0.301 MAIT L2
ENSG00000111142 METAP2 -633470 sc-eQTL 1.85e-01 0.133 0.1 0.301 MAIT L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 4.00e-01 0.0821 0.0974 0.301 MAIT L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 1.65e-01 -0.119 0.0855 0.301 MAIT L2
ENSG00000173588 CEP83 380062 sc-eQTL 1.58e-01 -0.139 0.0978 0.301 MAIT L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 1.38e-01 0.127 0.0855 0.301 MAIT L2
ENSG00000028203 VEZT -377696 sc-eQTL 5.03e-01 -0.0701 0.105 0.298 NK_CD56bright L2
ENSG00000057704 TMCC3 189493 sc-eQTL 5.96e-01 -0.0531 0.1 0.298 NK_CD56bright L2
ENSG00000111142 METAP2 -633470 sc-eQTL 6.28e-01 0.05 0.103 0.298 NK_CD56bright L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 3.52e-01 -0.101 0.108 0.298 NK_CD56bright L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 5.11e-01 0.0583 0.0885 0.298 NK_CD56bright L2
ENSG00000173588 CEP83 380062 sc-eQTL 9.76e-01 -0.0027 0.0897 0.298 NK_CD56bright L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 8.68e-01 0.0143 0.086 0.298 NK_CD56bright L2
ENSG00000028203 VEZT -377696 sc-eQTL 7.25e-01 -0.0349 0.0992 0.3 NK_CD56dim L2
ENSG00000057704 TMCC3 189493 sc-eQTL 3.63e-01 0.0785 0.0862 0.3 NK_CD56dim L2
ENSG00000111142 METAP2 -633470 sc-eQTL 2.71e-01 0.0986 0.0893 0.3 NK_CD56dim L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 9.05e-01 0.0109 0.0912 0.3 NK_CD56dim L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 4.17e-01 0.0651 0.08 0.3 NK_CD56dim L2
ENSG00000173588 CEP83 380062 sc-eQTL 7.07e-02 0.167 0.0919 0.3 NK_CD56dim L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 1.42e-03 0.204 0.0631 0.3 NK_CD56dim L2
ENSG00000028203 VEZT -377696 sc-eQTL 7.61e-01 -0.033 0.108 0.297 NK_HLA L2
ENSG00000057704 TMCC3 189493 sc-eQTL 3.30e-01 0.0935 0.0957 0.297 NK_HLA L2
ENSG00000111142 METAP2 -633470 sc-eQTL 4.65e-01 -0.0737 0.101 0.297 NK_HLA L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 8.43e-01 0.0212 0.106 0.297 NK_HLA L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 5.91e-01 0.0468 0.0868 0.297 NK_HLA L2
ENSG00000173588 CEP83 380062 sc-eQTL 4.11e-02 -0.203 0.0987 0.297 NK_HLA L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 4.32e-01 0.0706 0.0897 0.297 NK_HLA L2
ENSG00000028203 VEZT -377696 sc-eQTL 6.52e-01 -0.0416 0.092 0.3 NK_cytokine L2
ENSG00000057704 TMCC3 189493 sc-eQTL 3.23e-01 -0.0933 0.0942 0.3 NK_cytokine L2
ENSG00000111142 METAP2 -633470 sc-eQTL 5.14e-01 0.061 0.0933 0.3 NK_cytokine L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 7.55e-01 0.0303 0.0967 0.3 NK_cytokine L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 8.92e-01 -0.0114 0.0837 0.3 NK_cytokine L2
ENSG00000173588 CEP83 380062 sc-eQTL 9.30e-01 -0.00843 0.0961 0.3 NK_cytokine L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 4.65e-01 0.049 0.0669 0.3 NK_cytokine L2
ENSG00000028203 VEZT -377696 sc-eQTL 2.94e-01 0.138 0.131 0.285 PB L2
ENSG00000057704 TMCC3 189493 sc-eQTL 6.49e-01 -0.054 0.118 0.285 PB L2
ENSG00000111142 METAP2 -633470 sc-eQTL 1.13e-01 -0.208 0.13 0.285 PB L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 4.25e-01 -0.0997 0.124 0.285 PB L2
ENSG00000136014 USP44 -711426 sc-eQTL 2.80e-01 -0.127 0.117 0.285 PB L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 7.88e-01 -0.0327 0.121 0.285 PB L2
ENSG00000173588 CEP83 380062 sc-eQTL 9.27e-01 -0.0116 0.126 0.285 PB L2
ENSG00000180263 FGD6 -377432 sc-eQTL 3.76e-01 0.0929 0.105 0.285 PB L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 9.63e-01 -0.00341 0.0738 0.285 PB L2
ENSG00000028203 VEZT -377696 sc-eQTL 2.32e-02 -0.217 0.0947 0.3 Pro_T L2
ENSG00000057704 TMCC3 189493 sc-eQTL 5.37e-01 0.0528 0.0854 0.3 Pro_T L2
ENSG00000074527 NTN4 -951102 sc-eQTL 7.55e-01 0.0218 0.0697 0.3 Pro_T L2
ENSG00000111142 METAP2 -633470 sc-eQTL 7.02e-01 0.0316 0.0823 0.3 Pro_T L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 4.16e-02 0.202 0.0983 0.3 Pro_T L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 2.91e-01 0.103 0.097 0.3 Pro_T L2
ENSG00000173588 CEP83 380062 sc-eQTL 3.53e-01 -0.0894 0.0961 0.3 Pro_T L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 3.77e-01 -0.0531 0.06 0.3 Pro_T L2
ENSG00000028203 VEZT -377696 sc-eQTL 8.06e-01 -0.0242 0.0987 0.299 Treg L2
ENSG00000111142 METAP2 -633470 sc-eQTL 3.84e-01 -0.0811 0.093 0.299 Treg L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 1.70e-01 0.135 0.0981 0.299 Treg L2
ENSG00000136014 USP44 -711426 sc-eQTL 7.35e-01 0.0299 0.0882 0.299 Treg L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 3.50e-01 -0.0849 0.0907 0.299 Treg L2
ENSG00000173588 CEP83 380062 sc-eQTL 3.89e-01 0.0838 0.0971 0.299 Treg L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 8.41e-02 0.129 0.074 0.299 Treg L2
ENSG00000028203 VEZT -377696 sc-eQTL 2.86e-02 -0.216 0.0978 0.302 cDC L2
ENSG00000057704 TMCC3 189493 sc-eQTL 9.68e-01 0.00427 0.107 0.302 cDC L2
ENSG00000111142 METAP2 -633470 sc-eQTL 1.43e-01 0.159 0.108 0.302 cDC L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 5.02e-01 0.0703 0.105 0.302 cDC L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 6.86e-01 -0.0378 0.0933 0.302 cDC L2
ENSG00000173588 CEP83 380062 sc-eQTL 3.76e-01 0.0776 0.0873 0.302 cDC L2
ENSG00000180263 FGD6 -377432 sc-eQTL 7.42e-01 -0.0331 0.101 0.302 cDC L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 8.74e-03 0.222 0.0839 0.302 cDC L2
ENSG00000028203 VEZT -377696 sc-eQTL 4.97e-01 -0.0661 0.0973 0.299 cMono_IL1B L2
ENSG00000057704 TMCC3 189493 sc-eQTL 1.32e-02 0.189 0.0754 0.299 cMono_IL1B L2
ENSG00000111142 METAP2 -633470 sc-eQTL 2.31e-01 0.101 0.0838 0.299 cMono_IL1B L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 7.08e-02 0.16 0.0879 0.299 cMono_IL1B L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 2.17e-01 -0.0833 0.0673 0.299 cMono_IL1B L2
ENSG00000173588 CEP83 380062 sc-eQTL 9.90e-02 -0.151 0.0914 0.299 cMono_IL1B L2
ENSG00000180263 FGD6 -377432 sc-eQTL 1.09e-01 0.126 0.078 0.299 cMono_IL1B L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 3.13e-04 0.198 0.054 0.299 cMono_IL1B L2
ENSG00000028203 VEZT -377696 sc-eQTL 8.83e-01 -0.0145 0.0989 0.299 cMono_S100A L2
ENSG00000057704 TMCC3 189493 sc-eQTL 2.56e-01 0.0983 0.0863 0.299 cMono_S100A L2
ENSG00000111142 METAP2 -633470 sc-eQTL 8.73e-01 -0.0153 0.0956 0.299 cMono_S100A L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 4.03e-01 0.0788 0.094 0.299 cMono_S100A L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 3.55e-02 -0.148 0.0699 0.299 cMono_S100A L2
ENSG00000173588 CEP83 380062 sc-eQTL 2.19e-01 0.123 0.0995 0.299 cMono_S100A L2
ENSG00000180263 FGD6 -377432 sc-eQTL 8.54e-01 -0.0169 0.0914 0.299 cMono_S100A L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 3.41e-04 0.23 0.0631 0.299 cMono_S100A L2
ENSG00000028203 VEZT -377696 sc-eQTL 6.58e-01 0.0546 0.123 0.303 gdT L2
ENSG00000057704 TMCC3 189493 sc-eQTL 7.46e-01 0.0307 0.0944 0.303 gdT L2
ENSG00000074527 NTN4 -951102 sc-eQTL 6.45e-03 0.252 0.0913 0.303 gdT L2
ENSG00000111142 METAP2 -633470 sc-eQTL 8.37e-02 -0.202 0.116 0.303 gdT L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 2.50e-01 0.144 0.125 0.303 gdT L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 3.65e-01 0.108 0.119 0.303 gdT L2
ENSG00000173588 CEP83 380062 sc-eQTL 5.12e-01 0.0763 0.116 0.303 gdT L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 8.97e-01 -0.0131 0.101 0.303 gdT L2
ENSG00000028203 VEZT -377696 sc-eQTL 7.61e-01 0.0321 0.106 0.304 intMono L2
ENSG00000057704 TMCC3 189493 sc-eQTL 9.72e-01 0.00366 0.102 0.304 intMono L2
ENSG00000111142 METAP2 -633470 sc-eQTL 3.50e-01 -0.101 0.107 0.304 intMono L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 8.98e-01 -0.0129 0.1 0.304 intMono L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 2.45e-01 -0.101 0.0862 0.304 intMono L2
ENSG00000173588 CEP83 380062 sc-eQTL 1.75e-01 -0.141 0.104 0.304 intMono L2
ENSG00000180263 FGD6 -377432 sc-eQTL 5.13e-02 0.182 0.0926 0.304 intMono L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 3.61e-03 0.193 0.0654 0.304 intMono L2
ENSG00000028203 VEZT -377696 sc-eQTL 9.36e-01 0.00798 0.0992 0.303 ncMono L2
ENSG00000057704 TMCC3 189493 sc-eQTL 8.48e-01 0.0183 0.0957 0.303 ncMono L2
ENSG00000111142 METAP2 -633470 sc-eQTL 9.74e-01 0.00341 0.104 0.303 ncMono L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 3.26e-01 0.102 0.103 0.303 ncMono L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 1.76e-01 0.0892 0.0656 0.303 ncMono L2
ENSG00000173588 CEP83 380062 sc-eQTL 8.11e-01 0.0247 0.103 0.303 ncMono L2
ENSG00000180263 FGD6 -377432 sc-eQTL 5.35e-01 0.0608 0.0979 0.303 ncMono L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 1.65e-01 0.121 0.0867 0.303 ncMono L2
ENSG00000028203 VEZT -377696 sc-eQTL 3.29e-01 0.107 0.109 0.322 pDC L2
ENSG00000057704 TMCC3 189493 sc-eQTL 1.15e-01 0.168 0.106 0.322 pDC L2
ENSG00000111142 METAP2 -633470 sc-eQTL 3.00e-01 0.116 0.112 0.322 pDC L2
ENSG00000120798 NR2C1 -233578 sc-eQTL 4.79e-02 0.218 0.109 0.322 pDC L2
ENSG00000136040 PLXNC1 691473 sc-eQTL 6.63e-01 0.0464 0.106 0.322 pDC L2
ENSG00000173588 CEP83 380062 sc-eQTL 1.67e-01 -0.158 0.114 0.322 pDC L2
ENSG00000180263 FGD6 -377432 sc-eQTL 3.40e-01 0.0919 0.0959 0.322 pDC L2
ENSG00000184752 NDUFA12 -163698 sc-eQTL 4.26e-01 0.0755 0.0947 0.322 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -377696 sc-eQTL 2.99e-01 0.101 0.0974 0.299 B_Memory LOneK1K
ENSG00000057704 TMCC3 189493 sc-eQTL 3.83e-01 0.0899 0.103 0.299 B_Memory LOneK1K
ENSG00000111142 METAP2 -633470 sc-eQTL 8.19e-01 0.0208 0.0909 0.299 B_Memory LOneK1K
ENSG00000120798 NR2C1 -233578 sc-eQTL 9.01e-02 -0.177 0.104 0.299 B_Memory LOneK1K
ENSG00000136014 USP44 -711426 sc-eQTL 1.56e-01 0.137 0.0963 0.299 B_Memory LOneK1K
ENSG00000136040 PLXNC1 691473 sc-eQTL 6.98e-01 -0.0242 0.0623 0.299 B_Memory LOneK1K
ENSG00000173588 CEP83 380062 sc-eQTL 2.72e-01 0.0956 0.0868 0.299 B_Memory LOneK1K
ENSG00000180263 FGD6 -377432 sc-eQTL 7.34e-02 0.155 0.0859 0.299 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -163698 sc-eQTL 5.28e-01 -0.0378 0.0597 0.299 B_Memory LOneK1K
ENSG00000028203 VEZT -377696 sc-eQTL 8.73e-01 0.0147 0.0921 0.299 B_Naive LOneK1K
ENSG00000057704 TMCC3 189493 sc-eQTL 3.30e-01 0.091 0.0932 0.299 B_Naive LOneK1K
ENSG00000111142 METAP2 -633470 sc-eQTL 5.64e-02 0.146 0.0762 0.299 B_Naive LOneK1K
ENSG00000120798 NR2C1 -233578 sc-eQTL 6.82e-01 -0.0411 0.0999 0.299 B_Naive LOneK1K
ENSG00000136014 USP44 -711426 sc-eQTL 6.85e-01 -0.036 0.0887 0.299 B_Naive LOneK1K
ENSG00000136040 PLXNC1 691473 sc-eQTL 9.05e-01 -0.00901 0.0758 0.299 B_Naive LOneK1K
ENSG00000173588 CEP83 380062 sc-eQTL 9.50e-01 -0.00496 0.079 0.299 B_Naive LOneK1K
ENSG00000180263 FGD6 -377432 sc-eQTL 4.13e-01 0.0799 0.0973 0.299 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -163698 sc-eQTL 3.20e-01 -0.0535 0.0537 0.299 B_Naive LOneK1K
ENSG00000028203 VEZT -377696 sc-eQTL 1.98e-01 -0.115 0.0889 0.299 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 189493 sc-eQTL 7.74e-03 0.187 0.0695 0.299 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -633470 sc-eQTL 6.31e-01 0.0367 0.0763 0.299 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -233578 sc-eQTL 2.98e-02 0.18 0.0821 0.299 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 691473 sc-eQTL 7.11e-02 -0.113 0.0622 0.299 CD14_Mono LOneK1K
ENSG00000173588 CEP83 380062 sc-eQTL 4.32e-01 -0.0671 0.0853 0.299 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -377432 sc-eQTL 1.52e-01 0.11 0.0767 0.299 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -163698 sc-eQTL 2.28e-05 0.22 0.0507 0.299 CD14_Mono LOneK1K
ENSG00000028203 VEZT -377696 sc-eQTL 6.50e-01 -0.0457 0.101 0.302 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 189493 sc-eQTL 8.21e-01 0.0211 0.0933 0.302 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -633470 sc-eQTL 5.61e-01 -0.0537 0.0921 0.302 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -233578 sc-eQTL 6.94e-01 0.0407 0.103 0.302 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 691473 sc-eQTL 6.06e-01 0.0308 0.0595 0.302 CD16_Mono LOneK1K
ENSG00000173588 CEP83 380062 sc-eQTL 1.83e-01 -0.131 0.0985 0.302 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -377432 sc-eQTL 4.64e-02 0.168 0.0837 0.302 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -163698 sc-eQTL 2.63e-02 0.149 0.0665 0.302 CD16_Mono LOneK1K
ENSG00000028203 VEZT -377696 sc-eQTL 5.98e-01 -0.0483 0.0915 0.3 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 189493 sc-eQTL 7.09e-01 0.032 0.0854 0.3 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -633470 sc-eQTL 3.94e-01 0.0624 0.073 0.3 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -233578 sc-eQTL 6.55e-01 0.0371 0.0828 0.3 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 691473 sc-eQTL 6.49e-01 0.0331 0.0727 0.3 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 380062 sc-eQTL 2.79e-01 0.0884 0.0815 0.3 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -163698 sc-eQTL 6.32e-03 0.163 0.059 0.3 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000180263 FGD6 -377432 eQTL 2e-06 0.102 0.0214 0.00527 0.00454 0.266
ENSG00000184752 NDUFA12 -163698 eQTL 2.26e-18 0.171 0.0192 0.0103 0.00612 0.266
ENSG00000236349 SUCLG2P2 291809 eQTL 0.0478 0.0497 0.0251 0.00171 0.0 0.266
ENSG00000278916 CEP83-DT 380047 eQTL 0.0412 0.0805 0.0394 0.0 0.0 0.266

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000180263 FGD6 -377432 5.74e-07 1.19e-07 3.31e-08 1.82e-07 1.02e-07 9.65e-08 1.38e-07 5.24e-08 1.42e-07 4.23e-08 1.62e-07 7.58e-08 1.33e-07 6.56e-08 5.55e-08 7.89e-08 5.12e-08 1.18e-07 5.12e-08 2.85e-08 1.03e-07 1.3e-07 1.3e-07 5.19e-08 1.31e-07 1.13e-07 1.1e-07 8.49e-08 1.02e-07 1.1e-07 9.58e-08 3.29e-08 2.6e-08 8.3e-08 8.93e-08 4.19e-08 4.01e-08 8.48e-08 8.44e-08 3.87e-08 2.6e-08 2.15e-07 3.93e-08 0.0 1.12e-07 1.83e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000184752 NDUFA12 -163698 4.25e-06 1.03e-06 2.01e-07 1.23e-06 9.93e-08 6.06e-07 1.16e-06 7.79e-08 5.88e-07 1.39e-07 1.09e-06 3.62e-07 1.49e-06 2.8e-07 5.58e-07 2.89e-07 2.77e-07 5.72e-07 2.13e-07 9.01e-08 2.17e-07 5.2e-07 5.81e-07 7.36e-08 1.69e-06 2.49e-07 4.7e-07 1.88e-07 9.15e-07 8.5e-07 4.55e-07 3.71e-08 3.13e-08 2.87e-07 4.22e-07 6.94e-08 5.35e-08 8.61e-08 6.71e-08 4.24e-08 4.57e-08 3.32e-06 3.9e-07 1.55e-08 9.79e-08 8.24e-09 9.96e-08 4.33e-09 4.79e-08
ENSG00000236349 SUCLG2P2 291809 1.29e-06 1.59e-07 4.08e-08 2.27e-07 9.65e-08 8.89e-08 1.81e-07 5.35e-08 1.44e-07 4.24e-08 1.57e-07 7.78e-08 1.79e-07 8.07e-08 5.72e-08 7.3e-08 4.63e-08 1.64e-07 5.19e-08 3.59e-08 1.04e-07 1.27e-07 1.45e-07 4.98e-08 1.55e-07 1.14e-07 1.07e-07 8.7e-08 1.2e-07 1.07e-07 1.02e-07 3.19e-08 2.75e-08 8.55e-08 4.92e-08 3.87e-08 4.96e-08 8.75e-08 8.48e-08 3.74e-08 3.07e-08 7.2e-07 5.2e-08 0.0 9.21e-08 1.75e-08 1.45e-07 4.96e-09 4.72e-08