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Genes within 1Mb (chr12:94838874:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -378872 sc-eQTL 3.61e-02 0.17 0.0805 0.299 B L1
ENSG00000057704 TMCC3 188317 sc-eQTL 5.20e-01 0.0615 0.0955 0.299 B L1
ENSG00000111142 METAP2 -634646 sc-eQTL 2.75e-01 0.0782 0.0714 0.299 B L1
ENSG00000120798 NR2C1 -234754 sc-eQTL 1.20e-01 -0.14 0.0899 0.299 B L1
ENSG00000136014 USP44 -712602 sc-eQTL 8.44e-01 0.0163 0.0825 0.299 B L1
ENSG00000136040 PLXNC1 690297 sc-eQTL 7.97e-01 -0.014 0.0542 0.299 B L1
ENSG00000173588 CEP83 378886 sc-eQTL 7.80e-01 0.0192 0.0684 0.299 B L1
ENSG00000180263 FGD6 -378608 sc-eQTL 1.16e-01 0.13 0.0822 0.299 B L1
ENSG00000184752 NDUFA12 -164874 sc-eQTL 6.84e-01 -0.0161 0.0394 0.299 B L1
ENSG00000028203 VEZT -378872 sc-eQTL 4.58e-01 -0.0503 0.0676 0.299 CD4T L1
ENSG00000111142 METAP2 -634646 sc-eQTL 7.70e-01 0.0172 0.0587 0.299 CD4T L1
ENSG00000120798 NR2C1 -234754 sc-eQTL 1.01e-01 0.107 0.065 0.299 CD4T L1
ENSG00000136014 USP44 -712602 sc-eQTL 3.42e-01 0.085 0.0892 0.299 CD4T L1
ENSG00000136040 PLXNC1 690297 sc-eQTL 7.89e-01 0.0154 0.0575 0.299 CD4T L1
ENSG00000173588 CEP83 378886 sc-eQTL 5.12e-02 0.117 0.0597 0.299 CD4T L1
ENSG00000184752 NDUFA12 -164874 sc-eQTL 7.54e-04 0.21 0.0615 0.299 CD4T L1
ENSG00000028203 VEZT -378872 sc-eQTL 5.81e-01 0.0444 0.0803 0.299 CD8T L1
ENSG00000057704 TMCC3 188317 sc-eQTL 7.90e-01 0.0144 0.054 0.299 CD8T L1
ENSG00000111142 METAP2 -634646 sc-eQTL 9.76e-01 0.00204 0.0687 0.299 CD8T L1
ENSG00000120798 NR2C1 -234754 sc-eQTL 5.33e-01 -0.0545 0.0874 0.299 CD8T L1
ENSG00000136014 USP44 -712602 sc-eQTL 7.21e-01 -0.028 0.0783 0.299 CD8T L1
ENSG00000136040 PLXNC1 690297 sc-eQTL 1.07e-01 0.12 0.074 0.299 CD8T L1
ENSG00000173588 CEP83 378886 sc-eQTL 7.10e-01 -0.0259 0.0695 0.299 CD8T L1
ENSG00000184752 NDUFA12 -164874 sc-eQTL 1.16e-01 0.0892 0.0565 0.299 CD8T L1
ENSG00000028203 VEZT -378872 sc-eQTL 7.77e-02 -0.169 0.0955 0.3 DC L1
ENSG00000057704 TMCC3 188317 sc-eQTL 1.33e-01 0.153 0.101 0.3 DC L1
ENSG00000111142 METAP2 -634646 sc-eQTL 3.47e-01 0.095 0.101 0.3 DC L1
ENSG00000120798 NR2C1 -234754 sc-eQTL 3.87e-01 0.0847 0.0977 0.3 DC L1
ENSG00000136040 PLXNC1 690297 sc-eQTL 8.11e-01 -0.0219 0.0913 0.3 DC L1
ENSG00000173588 CEP83 378886 sc-eQTL 8.81e-01 0.0122 0.0813 0.3 DC L1
ENSG00000180263 FGD6 -378608 sc-eQTL 7.93e-01 -0.0238 0.0905 0.3 DC L1
ENSG00000184752 NDUFA12 -164874 sc-eQTL 3.59e-03 0.22 0.0746 0.3 DC L1
ENSG00000028203 VEZT -378872 sc-eQTL 3.08e-01 -0.0895 0.0876 0.299 Mono L1
ENSG00000057704 TMCC3 188317 sc-eQTL 3.83e-02 0.141 0.0676 0.299 Mono L1
ENSG00000111142 METAP2 -634646 sc-eQTL 7.13e-01 0.0258 0.0699 0.299 Mono L1
ENSG00000120798 NR2C1 -234754 sc-eQTL 7.78e-02 0.147 0.0828 0.299 Mono L1
ENSG00000136040 PLXNC1 690297 sc-eQTL 1.42e-01 -0.083 0.0563 0.299 Mono L1
ENSG00000173588 CEP83 378886 sc-eQTL 2.00e-01 -0.107 0.0834 0.299 Mono L1
ENSG00000180263 FGD6 -378608 sc-eQTL 1.30e-01 0.113 0.0741 0.299 Mono L1
ENSG00000184752 NDUFA12 -164874 sc-eQTL 5.58e-06 0.238 0.051 0.299 Mono L1
ENSG00000028203 VEZT -378872 sc-eQTL 6.06e-01 -0.0456 0.0882 0.3 NK L1
ENSG00000057704 TMCC3 188317 sc-eQTL 9.48e-01 0.00543 0.0833 0.3 NK L1
ENSG00000111142 METAP2 -634646 sc-eQTL 3.48e-01 0.0656 0.0697 0.3 NK L1
ENSG00000120798 NR2C1 -234754 sc-eQTL 7.15e-01 -0.0302 0.0827 0.3 NK L1
ENSG00000136040 PLXNC1 690297 sc-eQTL 6.35e-01 0.0324 0.0681 0.3 NK L1
ENSG00000173588 CEP83 378886 sc-eQTL 4.20e-01 0.0625 0.0774 0.3 NK L1
ENSG00000184752 NDUFA12 -164874 sc-eQTL 3.73e-03 0.164 0.056 0.3 NK L1
ENSG00000028203 VEZT -378872 sc-eQTL 1.41e-01 -0.146 0.0989 0.299 Other_T L1
ENSG00000057704 TMCC3 188317 sc-eQTL 3.84e-01 0.0737 0.0845 0.299 Other_T L1
ENSG00000074527 NTN4 -952278 sc-eQTL 6.79e-02 0.136 0.0742 0.299 Other_T L1
ENSG00000111142 METAP2 -634646 sc-eQTL 5.31e-01 0.0484 0.0772 0.299 Other_T L1
ENSG00000120798 NR2C1 -234754 sc-eQTL 3.90e-01 0.0828 0.0962 0.299 Other_T L1
ENSG00000136040 PLXNC1 690297 sc-eQTL 7.75e-01 0.0224 0.0782 0.299 Other_T L1
ENSG00000173588 CEP83 378886 sc-eQTL 4.77e-01 -0.0626 0.0879 0.299 Other_T L1
ENSG00000184752 NDUFA12 -164874 sc-eQTL 2.04e-02 0.113 0.0484 0.299 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -378872 sc-eQTL 8.36e-01 0.0223 0.108 0.306 B_Activated L2
ENSG00000057704 TMCC3 188317 sc-eQTL 4.85e-01 -0.0644 0.0919 0.306 B_Activated L2
ENSG00000111142 METAP2 -634646 sc-eQTL 4.80e-01 -0.0795 0.112 0.306 B_Activated L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 4.28e-01 0.0855 0.108 0.306 B_Activated L2
ENSG00000136014 USP44 -712602 sc-eQTL 7.96e-01 -0.0213 0.0823 0.306 B_Activated L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 7.67e-01 -0.0257 0.0869 0.306 B_Activated L2
ENSG00000173588 CEP83 378886 sc-eQTL 1.37e-01 0.161 0.108 0.306 B_Activated L2
ENSG00000180263 FGD6 -378608 sc-eQTL 1.15e-01 0.12 0.0757 0.306 B_Activated L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 3.72e-01 -0.0852 0.0951 0.306 B_Activated L2
ENSG00000028203 VEZT -378872 sc-eQTL 4.83e-01 0.0682 0.097 0.3 B_Intermediate L2
ENSG00000057704 TMCC3 188317 sc-eQTL 2.66e-01 0.109 0.0979 0.3 B_Intermediate L2
ENSG00000111142 METAP2 -634646 sc-eQTL 7.77e-01 0.0254 0.0896 0.3 B_Intermediate L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 1.16e-01 -0.154 0.0977 0.3 B_Intermediate L2
ENSG00000136014 USP44 -712602 sc-eQTL 1.32e-01 0.151 0.1 0.3 B_Intermediate L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 4.42e-01 -0.0635 0.0825 0.3 B_Intermediate L2
ENSG00000173588 CEP83 378886 sc-eQTL 3.04e-01 0.0941 0.0913 0.3 B_Intermediate L2
ENSG00000180263 FGD6 -378608 sc-eQTL 7.88e-01 0.0242 0.0899 0.3 B_Intermediate L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 6.55e-01 -0.0333 0.0743 0.3 B_Intermediate L2
ENSG00000028203 VEZT -378872 sc-eQTL 4.57e-01 0.0765 0.103 0.3 B_Memory L2
ENSG00000057704 TMCC3 188317 sc-eQTL 7.85e-01 0.0285 0.104 0.3 B_Memory L2
ENSG00000111142 METAP2 -634646 sc-eQTL 9.64e-01 0.00447 0.0997 0.3 B_Memory L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 1.68e-01 -0.148 0.107 0.3 B_Memory L2
ENSG00000136014 USP44 -712602 sc-eQTL 1.49e-01 0.138 0.095 0.3 B_Memory L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 7.89e-01 0.0216 0.0807 0.3 B_Memory L2
ENSG00000173588 CEP83 378886 sc-eQTL 7.75e-01 -0.0269 0.0941 0.3 B_Memory L2
ENSG00000180263 FGD6 -378608 sc-eQTL 3.10e-02 0.204 0.0939 0.3 B_Memory L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 8.73e-01 -0.0122 0.0764 0.3 B_Memory L2
ENSG00000028203 VEZT -378872 sc-eQTL 2.58e-01 0.11 0.0967 0.299 B_Naive1 L2
ENSG00000057704 TMCC3 188317 sc-eQTL 4.23e-01 -0.0786 0.0979 0.299 B_Naive1 L2
ENSG00000111142 METAP2 -634646 sc-eQTL 2.13e-02 0.189 0.0814 0.299 B_Naive1 L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 5.38e-01 0.062 0.1 0.299 B_Naive1 L2
ENSG00000136014 USP44 -712602 sc-eQTL 5.07e-01 -0.0659 0.0991 0.299 B_Naive1 L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 8.35e-01 0.0174 0.0833 0.299 B_Naive1 L2
ENSG00000173588 CEP83 378886 sc-eQTL 8.81e-01 -0.0129 0.086 0.299 B_Naive1 L2
ENSG00000180263 FGD6 -378608 sc-eQTL 7.31e-01 0.0324 0.0942 0.299 B_Naive1 L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 3.46e-01 -0.0518 0.0548 0.299 B_Naive1 L2
ENSG00000028203 VEZT -378872 sc-eQTL 2.12e-01 -0.131 0.105 0.3 B_Naive2 L2
ENSG00000057704 TMCC3 188317 sc-eQTL 2.56e-03 0.287 0.0939 0.3 B_Naive2 L2
ENSG00000111142 METAP2 -634646 sc-eQTL 8.08e-01 0.0236 0.097 0.3 B_Naive2 L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 2.06e-01 -0.134 0.106 0.3 B_Naive2 L2
ENSG00000136014 USP44 -712602 sc-eQTL 9.80e-01 -0.00238 0.097 0.3 B_Naive2 L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 5.26e-01 -0.0569 0.0897 0.3 B_Naive2 L2
ENSG00000173588 CEP83 378886 sc-eQTL 8.77e-01 0.0147 0.0947 0.3 B_Naive2 L2
ENSG00000180263 FGD6 -378608 sc-eQTL 4.79e-01 0.0563 0.0794 0.3 B_Naive2 L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 8.72e-01 -0.0126 0.0781 0.3 B_Naive2 L2
ENSG00000028203 VEZT -378872 sc-eQTL 8.63e-01 -0.0175 0.101 0.302 CD4_CTL L2
ENSG00000111142 METAP2 -634646 sc-eQTL 7.89e-01 0.0283 0.105 0.302 CD4_CTL L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 5.90e-02 0.199 0.105 0.302 CD4_CTL L2
ENSG00000136014 USP44 -712602 sc-eQTL 5.65e-01 0.0483 0.0838 0.302 CD4_CTL L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 5.68e-01 0.0539 0.0942 0.302 CD4_CTL L2
ENSG00000173588 CEP83 378886 sc-eQTL 7.44e-01 0.0315 0.0963 0.302 CD4_CTL L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 8.47e-02 0.149 0.0861 0.302 CD4_CTL L2
ENSG00000028203 VEZT -378872 sc-eQTL 4.87e-01 -0.0534 0.0767 0.299 CD4_Naive L2
ENSG00000111142 METAP2 -634646 sc-eQTL 7.14e-01 0.0244 0.0664 0.299 CD4_Naive L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 1.49e-01 0.117 0.0807 0.299 CD4_Naive L2
ENSG00000136014 USP44 -712602 sc-eQTL 6.73e-01 0.0394 0.0934 0.299 CD4_Naive L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 8.99e-01 0.00807 0.0636 0.299 CD4_Naive L2
ENSG00000173588 CEP83 378886 sc-eQTL 6.10e-01 0.0351 0.0688 0.299 CD4_Naive L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 1.99e-03 0.181 0.0578 0.299 CD4_Naive L2
ENSG00000028203 VEZT -378872 sc-eQTL 7.33e-01 -0.0276 0.0809 0.299 CD4_TCM L2
ENSG00000111142 METAP2 -634646 sc-eQTL 7.08e-01 -0.0284 0.0758 0.299 CD4_TCM L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 4.43e-01 0.0678 0.0881 0.299 CD4_TCM L2
ENSG00000136014 USP44 -712602 sc-eQTL 4.77e-01 0.0731 0.103 0.299 CD4_TCM L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 6.63e-01 0.033 0.0755 0.299 CD4_TCM L2
ENSG00000173588 CEP83 378886 sc-eQTL 1.39e-01 0.119 0.0801 0.299 CD4_TCM L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 1.58e-03 0.217 0.0678 0.299 CD4_TCM L2
ENSG00000028203 VEZT -378872 sc-eQTL 1.29e-01 0.158 0.104 0.299 CD4_TEM L2
ENSG00000111142 METAP2 -634646 sc-eQTL 2.70e-01 0.102 0.0923 0.299 CD4_TEM L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 6.70e-01 0.0414 0.0972 0.299 CD4_TEM L2
ENSG00000136014 USP44 -712602 sc-eQTL 3.34e-01 0.0943 0.0975 0.299 CD4_TEM L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 9.79e-02 0.138 0.0829 0.299 CD4_TEM L2
ENSG00000173588 CEP83 378886 sc-eQTL 1.64e-01 0.13 0.0933 0.299 CD4_TEM L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 1.01e-02 0.217 0.0834 0.299 CD4_TEM L2
ENSG00000028203 VEZT -378872 sc-eQTL 6.15e-01 0.0461 0.0916 0.299 CD8_CTL L2
ENSG00000057704 TMCC3 188317 sc-eQTL 5.39e-01 0.0497 0.0807 0.299 CD8_CTL L2
ENSG00000111142 METAP2 -634646 sc-eQTL 1.54e-01 -0.13 0.0912 0.299 CD8_CTL L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 8.03e-01 -0.0253 0.101 0.299 CD8_CTL L2
ENSG00000136014 USP44 -712602 sc-eQTL 9.06e-01 -0.0115 0.0971 0.299 CD8_CTL L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 4.99e-02 0.162 0.0821 0.299 CD8_CTL L2
ENSG00000173588 CEP83 378886 sc-eQTL 2.06e-01 0.115 0.0909 0.299 CD8_CTL L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 2.47e-01 0.0831 0.0716 0.299 CD8_CTL L2
ENSG00000028203 VEZT -378872 sc-eQTL 8.36e-02 -0.162 0.093 0.299 CD8_Naive L2
ENSG00000057704 TMCC3 188317 sc-eQTL 1.47e-01 0.106 0.0728 0.299 CD8_Naive L2
ENSG00000111142 METAP2 -634646 sc-eQTL 2.45e-01 0.0985 0.0844 0.299 CD8_Naive L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 5.25e-01 -0.0597 0.0939 0.299 CD8_Naive L2
ENSG00000136014 USP44 -712602 sc-eQTL 8.30e-01 0.0182 0.0848 0.299 CD8_Naive L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 7.73e-01 0.0248 0.0858 0.299 CD8_Naive L2
ENSG00000173588 CEP83 378886 sc-eQTL 3.42e-01 -0.0787 0.0826 0.299 CD8_Naive L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 3.14e-01 0.0691 0.0684 0.299 CD8_Naive L2
ENSG00000028203 VEZT -378872 sc-eQTL 9.05e-02 0.173 0.102 0.306 CD8_TCM L2
ENSG00000057704 TMCC3 188317 sc-eQTL 3.85e-01 0.0687 0.0788 0.306 CD8_TCM L2
ENSG00000111142 METAP2 -634646 sc-eQTL 2.49e-01 0.12 0.103 0.306 CD8_TCM L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 4.14e-01 -0.0855 0.104 0.306 CD8_TCM L2
ENSG00000136014 USP44 -712602 sc-eQTL 4.29e-01 0.0742 0.0936 0.306 CD8_TCM L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 8.93e-01 -0.0134 0.0989 0.306 CD8_TCM L2
ENSG00000173588 CEP83 378886 sc-eQTL 1.67e-01 0.14 0.101 0.306 CD8_TCM L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 4.54e-01 0.0611 0.0815 0.306 CD8_TCM L2
ENSG00000028203 VEZT -378872 sc-eQTL 6.05e-01 0.0535 0.103 0.295 CD8_TEM L2
ENSG00000057704 TMCC3 188317 sc-eQTL 2.40e-01 0.104 0.0884 0.295 CD8_TEM L2
ENSG00000111142 METAP2 -634646 sc-eQTL 2.91e-01 0.106 0.0999 0.295 CD8_TEM L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 9.70e-01 0.00401 0.105 0.295 CD8_TEM L2
ENSG00000136014 USP44 -712602 sc-eQTL 8.70e-01 0.0143 0.0875 0.295 CD8_TEM L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 6.75e-01 -0.0418 0.0996 0.295 CD8_TEM L2
ENSG00000173588 CEP83 378886 sc-eQTL 9.03e-01 -0.0126 0.103 0.295 CD8_TEM L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 4.97e-01 0.0596 0.0877 0.295 CD8_TEM L2
ENSG00000028203 VEZT -378872 sc-eQTL 1.70e-01 -0.142 0.103 0.301 MAIT L2
ENSG00000057704 TMCC3 188317 sc-eQTL 2.98e-01 0.0914 0.0875 0.301 MAIT L2
ENSG00000074527 NTN4 -952278 sc-eQTL 2.62e-01 0.0897 0.0798 0.301 MAIT L2
ENSG00000111142 METAP2 -634646 sc-eQTL 1.66e-01 0.14 0.1 0.301 MAIT L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 7.03e-01 0.0373 0.0977 0.301 MAIT L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 2.33e-01 -0.102 0.0857 0.301 MAIT L2
ENSG00000173588 CEP83 378886 sc-eQTL 2.05e-01 -0.125 0.0981 0.301 MAIT L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 8.59e-02 0.148 0.0855 0.301 MAIT L2
ENSG00000028203 VEZT -378872 sc-eQTL 3.37e-01 -0.1 0.104 0.298 NK_CD56bright L2
ENSG00000057704 TMCC3 188317 sc-eQTL 5.76e-01 -0.0559 0.0999 0.298 NK_CD56bright L2
ENSG00000111142 METAP2 -634646 sc-eQTL 6.43e-01 0.0476 0.103 0.298 NK_CD56bright L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 4.05e-01 -0.0898 0.108 0.298 NK_CD56bright L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 5.92e-01 0.0474 0.0883 0.298 NK_CD56bright L2
ENSG00000173588 CEP83 378886 sc-eQTL 7.18e-01 -0.0324 0.0895 0.298 NK_CD56bright L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 7.08e-01 0.0321 0.0857 0.298 NK_CD56bright L2
ENSG00000028203 VEZT -378872 sc-eQTL 7.77e-01 -0.028 0.0987 0.3 NK_CD56dim L2
ENSG00000057704 TMCC3 188317 sc-eQTL 2.88e-01 0.0914 0.0857 0.3 NK_CD56dim L2
ENSG00000111142 METAP2 -634646 sc-eQTL 2.38e-01 0.105 0.0888 0.3 NK_CD56dim L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 8.16e-01 0.0212 0.0908 0.3 NK_CD56dim L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 6.00e-01 0.0418 0.0797 0.3 NK_CD56dim L2
ENSG00000173588 CEP83 378886 sc-eQTL 5.26e-02 0.178 0.0913 0.3 NK_CD56dim L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 3.46e-04 0.227 0.0623 0.3 NK_CD56dim L2
ENSG00000028203 VEZT -378872 sc-eQTL 6.24e-01 -0.053 0.108 0.295 NK_HLA L2
ENSG00000057704 TMCC3 188317 sc-eQTL 3.76e-01 0.0847 0.0954 0.295 NK_HLA L2
ENSG00000111142 METAP2 -634646 sc-eQTL 5.34e-01 -0.0626 0.1 0.295 NK_HLA L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 7.53e-01 0.0334 0.106 0.295 NK_HLA L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 5.11e-01 0.057 0.0865 0.295 NK_HLA L2
ENSG00000173588 CEP83 378886 sc-eQTL 2.09e-02 -0.228 0.0981 0.295 NK_HLA L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 3.93e-01 0.0765 0.0893 0.295 NK_HLA L2
ENSG00000028203 VEZT -378872 sc-eQTL 7.98e-01 -0.0235 0.0917 0.3 NK_cytokine L2
ENSG00000057704 TMCC3 188317 sc-eQTL 2.58e-01 -0.106 0.0938 0.3 NK_cytokine L2
ENSG00000111142 METAP2 -634646 sc-eQTL 4.52e-01 0.0701 0.093 0.3 NK_cytokine L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 7.39e-01 0.0322 0.0964 0.3 NK_cytokine L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 8.01e-01 -0.0211 0.0834 0.3 NK_cytokine L2
ENSG00000173588 CEP83 378886 sc-eQTL 8.50e-01 -0.0181 0.0958 0.3 NK_cytokine L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 3.78e-01 0.0589 0.0667 0.3 NK_cytokine L2
ENSG00000028203 VEZT -378872 sc-eQTL 3.35e-01 0.127 0.131 0.289 PB L2
ENSG00000057704 TMCC3 188317 sc-eQTL 5.42e-01 -0.0726 0.119 0.289 PB L2
ENSG00000111142 METAP2 -634646 sc-eQTL 1.15e-01 -0.207 0.13 0.289 PB L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 5.42e-01 -0.0765 0.125 0.289 PB L2
ENSG00000136014 USP44 -712602 sc-eQTL 4.02e-01 -0.0988 0.117 0.289 PB L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 8.09e-01 -0.0296 0.122 0.289 PB L2
ENSG00000173588 CEP83 378886 sc-eQTL 8.88e-01 0.0178 0.127 0.289 PB L2
ENSG00000180263 FGD6 -378608 sc-eQTL 3.04e-01 0.108 0.105 0.289 PB L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 9.86e-01 0.00134 0.074 0.289 PB L2
ENSG00000028203 VEZT -378872 sc-eQTL 4.48e-02 -0.192 0.0949 0.3 Pro_T L2
ENSG00000057704 TMCC3 188317 sc-eQTL 4.95e-01 0.0583 0.0853 0.3 Pro_T L2
ENSG00000074527 NTN4 -952278 sc-eQTL 6.83e-01 0.0285 0.0696 0.3 Pro_T L2
ENSG00000111142 METAP2 -634646 sc-eQTL 6.45e-01 0.0379 0.0822 0.3 Pro_T L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 3.51e-02 0.208 0.0981 0.3 Pro_T L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 1.49e-01 0.14 0.0966 0.3 Pro_T L2
ENSG00000173588 CEP83 378886 sc-eQTL 3.75e-01 -0.0853 0.096 0.3 Pro_T L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 6.80e-01 -0.0248 0.06 0.3 Pro_T L2
ENSG00000028203 VEZT -378872 sc-eQTL 6.26e-01 -0.0481 0.0986 0.299 Treg L2
ENSG00000111142 METAP2 -634646 sc-eQTL 4.42e-01 -0.0716 0.0929 0.299 Treg L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 1.78e-01 0.132 0.0981 0.299 Treg L2
ENSG00000136014 USP44 -712602 sc-eQTL 8.20e-01 0.0201 0.0881 0.299 Treg L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 3.15e-01 -0.0912 0.0906 0.299 Treg L2
ENSG00000173588 CEP83 378886 sc-eQTL 3.43e-01 0.0922 0.097 0.299 Treg L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 9.34e-02 0.125 0.074 0.299 Treg L2
ENSG00000028203 VEZT -378872 sc-eQTL 3.64e-02 -0.207 0.0979 0.302 cDC L2
ENSG00000057704 TMCC3 188317 sc-eQTL 6.96e-01 0.0417 0.107 0.302 cDC L2
ENSG00000111142 METAP2 -634646 sc-eQTL 2.10e-01 0.136 0.108 0.302 cDC L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 5.11e-01 0.0689 0.105 0.302 cDC L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 9.91e-01 -0.00108 0.0933 0.302 cDC L2
ENSG00000173588 CEP83 378886 sc-eQTL 4.16e-01 0.0713 0.0874 0.302 cDC L2
ENSG00000180263 FGD6 -378608 sc-eQTL 6.17e-01 -0.0503 0.1 0.302 cDC L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 5.95e-03 0.233 0.0838 0.302 cDC L2
ENSG00000028203 VEZT -378872 sc-eQTL 5.96e-01 -0.0515 0.0971 0.299 cMono_IL1B L2
ENSG00000057704 TMCC3 188317 sc-eQTL 1.46e-02 0.185 0.0753 0.299 cMono_IL1B L2
ENSG00000111142 METAP2 -634646 sc-eQTL 1.47e-01 0.122 0.0834 0.299 cMono_IL1B L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 5.44e-02 0.169 0.0876 0.299 cMono_IL1B L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 2.57e-01 -0.0763 0.0671 0.299 cMono_IL1B L2
ENSG00000173588 CEP83 378886 sc-eQTL 1.10e-01 -0.146 0.0912 0.299 cMono_IL1B L2
ENSG00000180263 FGD6 -378608 sc-eQTL 9.35e-02 0.131 0.0778 0.299 cMono_IL1B L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 2.56e-04 0.2 0.0538 0.299 cMono_IL1B L2
ENSG00000028203 VEZT -378872 sc-eQTL 9.21e-01 0.00986 0.0988 0.299 cMono_S100A L2
ENSG00000057704 TMCC3 188317 sc-eQTL 2.93e-01 0.091 0.0863 0.299 cMono_S100A L2
ENSG00000111142 METAP2 -634646 sc-eQTL 9.53e-01 -0.00569 0.0955 0.299 cMono_S100A L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 4.69e-01 0.0683 0.094 0.299 cMono_S100A L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 3.18e-02 -0.151 0.0698 0.299 cMono_S100A L2
ENSG00000173588 CEP83 378886 sc-eQTL 2.95e-01 0.104 0.0995 0.299 cMono_S100A L2
ENSG00000180263 FGD6 -378608 sc-eQTL 9.96e-01 0.000461 0.0914 0.299 cMono_S100A L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 1.44e-04 0.243 0.0628 0.299 cMono_S100A L2
ENSG00000028203 VEZT -378872 sc-eQTL 6.34e-01 0.0588 0.123 0.3 gdT L2
ENSG00000057704 TMCC3 188317 sc-eQTL 7.49e-01 0.0302 0.0943 0.3 gdT L2
ENSG00000074527 NTN4 -952278 sc-eQTL 7.97e-03 0.246 0.0913 0.3 gdT L2
ENSG00000111142 METAP2 -634646 sc-eQTL 6.95e-02 -0.212 0.116 0.3 gdT L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 1.89e-01 0.164 0.124 0.3 gdT L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 2.65e-01 0.132 0.118 0.3 gdT L2
ENSG00000173588 CEP83 378886 sc-eQTL 7.29e-01 0.0403 0.116 0.3 gdT L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 9.25e-01 -0.00946 0.101 0.3 gdT L2
ENSG00000028203 VEZT -378872 sc-eQTL 9.74e-01 0.00347 0.106 0.304 intMono L2
ENSG00000057704 TMCC3 188317 sc-eQTL 9.87e-01 -0.00171 0.103 0.304 intMono L2
ENSG00000111142 METAP2 -634646 sc-eQTL 2.97e-01 -0.112 0.107 0.304 intMono L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 8.74e-01 -0.016 0.1 0.304 intMono L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 2.35e-01 -0.103 0.0862 0.304 intMono L2
ENSG00000173588 CEP83 378886 sc-eQTL 1.26e-01 -0.159 0.104 0.304 intMono L2
ENSG00000180263 FGD6 -378608 sc-eQTL 4.69e-02 0.185 0.0926 0.304 intMono L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 1.39e-03 0.211 0.0651 0.304 intMono L2
ENSG00000028203 VEZT -378872 sc-eQTL 6.44e-01 0.0459 0.0992 0.303 ncMono L2
ENSG00000057704 TMCC3 188317 sc-eQTL 7.19e-01 0.0345 0.0957 0.303 ncMono L2
ENSG00000111142 METAP2 -634646 sc-eQTL 7.79e-01 0.0293 0.104 0.303 ncMono L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 4.61e-01 0.0763 0.103 0.303 ncMono L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 1.26e-01 0.101 0.0656 0.303 ncMono L2
ENSG00000173588 CEP83 378886 sc-eQTL 9.15e-01 0.011 0.103 0.303 ncMono L2
ENSG00000180263 FGD6 -378608 sc-eQTL 5.70e-01 0.0556 0.0979 0.303 ncMono L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 1.26e-01 0.133 0.0866 0.303 ncMono L2
ENSG00000028203 VEZT -378872 sc-eQTL 4.15e-01 0.0888 0.109 0.322 pDC L2
ENSG00000057704 TMCC3 188317 sc-eQTL 1.66e-01 0.147 0.105 0.322 pDC L2
ENSG00000111142 METAP2 -634646 sc-eQTL 4.11e-01 0.0913 0.111 0.322 pDC L2
ENSG00000120798 NR2C1 -234754 sc-eQTL 3.88e-02 0.226 0.108 0.322 pDC L2
ENSG00000136040 PLXNC1 690297 sc-eQTL 7.53e-01 0.0332 0.105 0.322 pDC L2
ENSG00000173588 CEP83 378886 sc-eQTL 1.67e-01 -0.157 0.113 0.322 pDC L2
ENSG00000180263 FGD6 -378608 sc-eQTL 3.32e-01 0.0926 0.0951 0.322 pDC L2
ENSG00000184752 NDUFA12 -164874 sc-eQTL 3.37e-01 0.0904 0.0938 0.322 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -378872 sc-eQTL 2.44e-01 0.113 0.097 0.299 B_Memory LOneK1K
ENSG00000057704 TMCC3 188317 sc-eQTL 4.84e-01 0.0719 0.103 0.299 B_Memory LOneK1K
ENSG00000111142 METAP2 -634646 sc-eQTL 7.70e-01 0.0265 0.0906 0.299 B_Memory LOneK1K
ENSG00000120798 NR2C1 -234754 sc-eQTL 8.11e-02 -0.181 0.103 0.299 B_Memory LOneK1K
ENSG00000136014 USP44 -712602 sc-eQTL 2.06e-01 0.122 0.0961 0.299 B_Memory LOneK1K
ENSG00000136040 PLXNC1 690297 sc-eQTL 5.45e-01 -0.0376 0.0621 0.299 B_Memory LOneK1K
ENSG00000173588 CEP83 378886 sc-eQTL 2.69e-01 0.0959 0.0865 0.299 B_Memory LOneK1K
ENSG00000180263 FGD6 -378608 sc-eQTL 6.78e-02 0.157 0.0856 0.299 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -164874 sc-eQTL 5.85e-01 -0.0326 0.0595 0.299 B_Memory LOneK1K
ENSG00000028203 VEZT -378872 sc-eQTL 7.96e-01 0.0238 0.092 0.299 B_Naive LOneK1K
ENSG00000057704 TMCC3 188317 sc-eQTL 4.36e-01 0.0727 0.0932 0.299 B_Naive LOneK1K
ENSG00000111142 METAP2 -634646 sc-eQTL 3.07e-02 0.165 0.0759 0.299 B_Naive LOneK1K
ENSG00000120798 NR2C1 -234754 sc-eQTL 5.16e-01 -0.0649 0.0998 0.299 B_Naive LOneK1K
ENSG00000136014 USP44 -712602 sc-eQTL 7.21e-01 -0.0316 0.0886 0.299 B_Naive LOneK1K
ENSG00000136040 PLXNC1 690297 sc-eQTL 9.62e-01 -0.00363 0.0757 0.299 B_Naive LOneK1K
ENSG00000173588 CEP83 378886 sc-eQTL 8.55e-01 -0.0144 0.0789 0.299 B_Naive LOneK1K
ENSG00000180263 FGD6 -378608 sc-eQTL 3.38e-01 0.0933 0.0971 0.299 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -164874 sc-eQTL 4.23e-01 -0.0431 0.0537 0.299 B_Naive LOneK1K
ENSG00000028203 VEZT -378872 sc-eQTL 3.16e-01 -0.0891 0.0888 0.299 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 188317 sc-eQTL 8.46e-03 0.184 0.0694 0.299 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -634646 sc-eQTL 4.57e-01 0.0566 0.076 0.299 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -234754 sc-eQTL 3.34e-02 0.175 0.0819 0.299 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 690297 sc-eQTL 8.08e-02 -0.109 0.0621 0.299 CD14_Mono LOneK1K
ENSG00000173588 CEP83 378886 sc-eQTL 3.80e-01 -0.0748 0.085 0.299 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -378608 sc-eQTL 1.08e-01 0.123 0.0764 0.299 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -164874 sc-eQTL 1.34e-05 0.225 0.0505 0.299 CD14_Mono LOneK1K
ENSG00000028203 VEZT -378872 sc-eQTL 7.79e-01 -0.0283 0.101 0.302 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 188317 sc-eQTL 7.51e-01 0.0297 0.0934 0.302 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -634646 sc-eQTL 5.92e-01 -0.0496 0.0922 0.302 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -234754 sc-eQTL 8.06e-01 0.0253 0.103 0.302 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 690297 sc-eQTL 5.39e-01 0.0366 0.0595 0.302 CD16_Mono LOneK1K
ENSG00000173588 CEP83 378886 sc-eQTL 1.53e-01 -0.141 0.0985 0.302 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -378608 sc-eQTL 6.03e-02 0.158 0.0838 0.302 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -164874 sc-eQTL 1.59e-02 0.162 0.0665 0.302 CD16_Mono LOneK1K
ENSG00000028203 VEZT -378872 sc-eQTL 7.13e-01 -0.0336 0.0911 0.3 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 188317 sc-eQTL 6.84e-01 0.0346 0.0851 0.3 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -634646 sc-eQTL 3.14e-01 0.0734 0.0726 0.3 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -234754 sc-eQTL 5.81e-01 0.0456 0.0825 0.3 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 690297 sc-eQTL 8.56e-01 0.0132 0.0724 0.3 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 378886 sc-eQTL 3.00e-01 0.0844 0.0812 0.3 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -164874 sc-eQTL 2.90e-03 0.176 0.0585 0.3 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000180263 FGD6 -378608 eQTL 1.45e-06 0.104 0.0214 0.00563 0.00496 0.266
ENSG00000184752 NDUFA12 -164874 eQTL 1.3e-18 0.173 0.0192 0.00978 0.00608 0.266
ENSG00000236349 SUCLG2P2 290633 eQTL 0.0541 0.0485 0.0251 0.00151 0.0 0.266

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000180263 FGD6 -378608 1.01e-06 6.81e-07 1.12e-07 4.1e-07 1.05e-07 2.86e-07 5.9e-07 1.21e-07 6.03e-07 2.88e-07 8.58e-07 4.55e-07 1.02e-06 1.98e-07 3.35e-07 2.89e-07 3.69e-07 3.95e-07 2.65e-07 2.37e-07 2.38e-07 4.66e-07 3.99e-07 2.24e-07 1.14e-06 2.4e-07 3.37e-07 3.51e-07 4.15e-07 7.39e-07 3.68e-07 4.28e-08 5.75e-08 1.9e-07 3.6e-07 1.55e-07 2.14e-07 1.06e-07 8.26e-08 8.72e-09 1.95e-07 7.54e-07 3.55e-08 1.93e-08 1.58e-07 3.54e-08 1.18e-07 7.28e-08 6.46e-08
ENSG00000184752 NDUFA12 -164874 2.48e-06 2.62e-06 2.73e-07 2.06e-06 4.77e-07 8.27e-07 1.55e-06 4.22e-07 1.82e-06 8.44e-07 2.43e-06 1.34e-06 3.5e-06 1.39e-06 9.5e-07 1.19e-06 1.09e-06 1.55e-06 7.68e-07 1.15e-06 9.25e-07 2.43e-06 2.13e-06 9.59e-07 3.45e-06 9.86e-07 1.21e-06 1.45e-06 1.84e-06 1.85e-06 1.71e-06 2.21e-07 4.53e-07 1.28e-06 1.26e-06 9.21e-07 8.28e-07 3.93e-07 9.94e-07 3.57e-07 1.52e-07 3.23e-06 4.34e-07 1.25e-07 3.56e-07 3.31e-07 4.22e-07 2.34e-07 2.97e-07
ENSG00000236349 SUCLG2P2 290633 1.34e-06 9.31e-07 2.7e-07 7.96e-07 1.79e-07 4.63e-07 1.07e-06 2.71e-07 1.14e-06 3.78e-07 1.35e-06 6.19e-07 2e-06 2.55e-07 4.91e-07 6.36e-07 7.72e-07 5.53e-07 5.26e-07 6.97e-07 3.87e-07 9.92e-07 8.1e-07 5.4e-07 1.95e-06 2.37e-07 6.19e-07 6.51e-07 8.97e-07 1.13e-06 5.45e-07 1.55e-07 2.27e-07 5.39e-07 5.34e-07 4.41e-07 5.03e-07 1.61e-07 2.44e-07 2.42e-07 2.88e-07 1.57e-06 6.28e-08 1.23e-08 1.62e-07 1.14e-07 1.8e-07 8.31e-08 8.83e-08