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Genes within 1Mb (chr12:94824554:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -393192 sc-eQTL 1.57e-01 -0.198 0.139 0.929 B L1
ENSG00000057704 TMCC3 173997 sc-eQTL 2.84e-01 -0.176 0.164 0.929 B L1
ENSG00000111142 METAP2 -648966 sc-eQTL 9.83e-01 0.00267 0.123 0.929 B L1
ENSG00000120798 NR2C1 -249074 sc-eQTL 8.01e-01 0.0393 0.155 0.929 B L1
ENSG00000136014 USP44 -726922 sc-eQTL 6.36e-01 0.0673 0.142 0.929 B L1
ENSG00000136040 PLXNC1 675977 sc-eQTL 1.31e-01 -0.14 0.0927 0.929 B L1
ENSG00000173588 CEP83 364566 sc-eQTL 6.64e-01 0.0512 0.118 0.929 B L1
ENSG00000180263 FGD6 -392928 sc-eQTL 5.11e-01 0.0935 0.142 0.929 B L1
ENSG00000184752 NDUFA12 -179194 sc-eQTL 6.04e-01 0.0352 0.0678 0.929 B L1
ENSG00000028203 VEZT -393192 sc-eQTL 9.16e-01 0.0124 0.117 0.929 CD4T L1
ENSG00000111142 METAP2 -648966 sc-eQTL 8.53e-01 -0.019 0.102 0.929 CD4T L1
ENSG00000120798 NR2C1 -249074 sc-eQTL 1.91e-01 0.148 0.113 0.929 CD4T L1
ENSG00000136014 USP44 -726922 sc-eQTL 7.85e-01 -0.0424 0.155 0.929 CD4T L1
ENSG00000136040 PLXNC1 675977 sc-eQTL 2.90e-01 0.105 0.0995 0.929 CD4T L1
ENSG00000173588 CEP83 364566 sc-eQTL 4.10e-01 -0.0861 0.104 0.929 CD4T L1
ENSG00000184752 NDUFA12 -179194 sc-eQTL 3.76e-01 0.0969 0.109 0.929 CD4T L1
ENSG00000028203 VEZT -393192 sc-eQTL 5.41e-02 -0.27 0.14 0.929 CD8T L1
ENSG00000057704 TMCC3 173997 sc-eQTL 2.79e-01 0.102 0.0943 0.929 CD8T L1
ENSG00000111142 METAP2 -648966 sc-eQTL 3.11e-01 0.122 0.12 0.929 CD8T L1
ENSG00000120798 NR2C1 -249074 sc-eQTL 7.29e-01 0.0532 0.153 0.929 CD8T L1
ENSG00000136014 USP44 -726922 sc-eQTL 6.57e-01 -0.0609 0.137 0.929 CD8T L1
ENSG00000136040 PLXNC1 675977 sc-eQTL 4.17e-01 -0.106 0.13 0.929 CD8T L1
ENSG00000173588 CEP83 364566 sc-eQTL 6.84e-01 0.0496 0.122 0.929 CD8T L1
ENSG00000184752 NDUFA12 -179194 sc-eQTL 4.53e-01 0.0748 0.0995 0.929 CD8T L1
ENSG00000028203 VEZT -393192 sc-eQTL 2.99e-01 0.167 0.161 0.928 DC L1
ENSG00000057704 TMCC3 173997 sc-eQTL 2.46e-01 0.198 0.17 0.928 DC L1
ENSG00000111142 METAP2 -648966 sc-eQTL 8.46e-01 0.0329 0.169 0.928 DC L1
ENSG00000120798 NR2C1 -249074 sc-eQTL 6.23e-01 0.0808 0.164 0.928 DC L1
ENSG00000136040 PLXNC1 675977 sc-eQTL 4.96e-01 0.104 0.153 0.928 DC L1
ENSG00000173588 CEP83 364566 sc-eQTL 6.23e-01 0.0671 0.136 0.928 DC L1
ENSG00000180263 FGD6 -392928 sc-eQTL 1.74e-01 -0.206 0.151 0.928 DC L1
ENSG00000184752 NDUFA12 -179194 sc-eQTL 4.18e-01 0.104 0.127 0.928 DC L1
ENSG00000028203 VEZT -393192 sc-eQTL 4.31e-01 -0.123 0.155 0.929 Mono L1
ENSG00000057704 TMCC3 173997 sc-eQTL 1.17e-01 0.189 0.12 0.929 Mono L1
ENSG00000111142 METAP2 -648966 sc-eQTL 5.60e-01 0.0723 0.124 0.929 Mono L1
ENSG00000120798 NR2C1 -249074 sc-eQTL 9.39e-01 0.0114 0.148 0.929 Mono L1
ENSG00000136040 PLXNC1 675977 sc-eQTL 8.45e-02 0.173 0.0996 0.929 Mono L1
ENSG00000173588 CEP83 364566 sc-eQTL 7.79e-03 -0.392 0.146 0.929 Mono L1
ENSG00000180263 FGD6 -392928 sc-eQTL 6.77e-02 -0.24 0.131 0.929 Mono L1
ENSG00000184752 NDUFA12 -179194 sc-eQTL 7.65e-01 -0.0283 0.0948 0.929 Mono L1
ENSG00000028203 VEZT -393192 sc-eQTL 6.01e-01 0.0804 0.154 0.929 NK L1
ENSG00000057704 TMCC3 173997 sc-eQTL 2.03e-01 0.184 0.144 0.929 NK L1
ENSG00000111142 METAP2 -648966 sc-eQTL 5.70e-01 0.0692 0.122 0.929 NK L1
ENSG00000120798 NR2C1 -249074 sc-eQTL 2.27e-01 0.174 0.144 0.929 NK L1
ENSG00000136040 PLXNC1 675977 sc-eQTL 6.59e-01 -0.0524 0.119 0.929 NK L1
ENSG00000173588 CEP83 364566 sc-eQTL 3.69e-01 0.121 0.135 0.929 NK L1
ENSG00000184752 NDUFA12 -179194 sc-eQTL 6.68e-01 0.0427 0.0995 0.929 NK L1
ENSG00000028203 VEZT -393192 sc-eQTL 3.60e-02 -0.352 0.167 0.929 Other_T L1
ENSG00000057704 TMCC3 173997 sc-eQTL 6.05e-01 0.0743 0.144 0.929 Other_T L1
ENSG00000074527 NTN4 -966598 sc-eQTL 1.79e-02 0.299 0.125 0.929 Other_T L1
ENSG00000111142 METAP2 -648966 sc-eQTL 4.44e-02 0.263 0.13 0.929 Other_T L1
ENSG00000120798 NR2C1 -249074 sc-eQTL 9.34e-01 0.0135 0.164 0.929 Other_T L1
ENSG00000136040 PLXNC1 675977 sc-eQTL 4.84e-01 0.0931 0.133 0.929 Other_T L1
ENSG00000173588 CEP83 364566 sc-eQTL 9.49e-01 0.00965 0.149 0.929 Other_T L1
ENSG00000184752 NDUFA12 -179194 sc-eQTL 8.53e-01 0.0154 0.0832 0.929 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -393192 sc-eQTL 9.68e-01 -0.00772 0.194 0.929 B_Activated L2
ENSG00000057704 TMCC3 173997 sc-eQTL 3.13e-02 -0.355 0.164 0.929 B_Activated L2
ENSG00000111142 METAP2 -648966 sc-eQTL 8.99e-01 0.0259 0.203 0.929 B_Activated L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 5.02e-01 -0.131 0.194 0.929 B_Activated L2
ENSG00000136014 USP44 -726922 sc-eQTL 6.86e-01 0.0601 0.148 0.929 B_Activated L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 5.24e-01 0.1 0.157 0.929 B_Activated L2
ENSG00000173588 CEP83 364566 sc-eQTL 1.03e-01 0.317 0.194 0.929 B_Activated L2
ENSG00000180263 FGD6 -392928 sc-eQTL 3.46e-03 -0.397 0.134 0.929 B_Activated L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 6.57e-01 -0.0765 0.172 0.929 B_Activated L2
ENSG00000028203 VEZT -393192 sc-eQTL 5.04e-02 -0.325 0.165 0.929 B_Intermediate L2
ENSG00000057704 TMCC3 173997 sc-eQTL 7.68e-01 -0.0497 0.169 0.929 B_Intermediate L2
ENSG00000111142 METAP2 -648966 sc-eQTL 8.18e-01 0.0354 0.154 0.929 B_Intermediate L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 9.04e-01 -0.0203 0.169 0.929 B_Intermediate L2
ENSG00000136014 USP44 -726922 sc-eQTL 4.23e-01 0.138 0.172 0.929 B_Intermediate L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 5.67e-01 -0.0813 0.142 0.929 B_Intermediate L2
ENSG00000173588 CEP83 364566 sc-eQTL 5.10e-01 0.104 0.157 0.929 B_Intermediate L2
ENSG00000180263 FGD6 -392928 sc-eQTL 3.97e-01 0.131 0.154 0.929 B_Intermediate L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 1.30e-01 0.193 0.127 0.929 B_Intermediate L2
ENSG00000028203 VEZT -393192 sc-eQTL 9.34e-01 -0.0144 0.174 0.929 B_Memory L2
ENSG00000057704 TMCC3 173997 sc-eQTL 8.19e-02 0.307 0.176 0.929 B_Memory L2
ENSG00000111142 METAP2 -648966 sc-eQTL 9.93e-01 0.00139 0.169 0.929 B_Memory L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 8.69e-01 -0.03 0.182 0.929 B_Memory L2
ENSG00000136014 USP44 -726922 sc-eQTL 5.05e-01 0.108 0.162 0.929 B_Memory L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 5.83e-01 0.0752 0.137 0.929 B_Memory L2
ENSG00000173588 CEP83 364566 sc-eQTL 5.93e-01 0.0856 0.16 0.929 B_Memory L2
ENSG00000180263 FGD6 -392928 sc-eQTL 1.34e-01 0.241 0.16 0.929 B_Memory L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 2.33e-01 0.155 0.129 0.929 B_Memory L2
ENSG00000028203 VEZT -393192 sc-eQTL 2.20e-01 -0.202 0.164 0.929 B_Naive1 L2
ENSG00000057704 TMCC3 173997 sc-eQTL 1.79e-01 -0.224 0.166 0.929 B_Naive1 L2
ENSG00000111142 METAP2 -648966 sc-eQTL 3.04e-01 0.144 0.14 0.929 B_Naive1 L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 9.29e-02 0.287 0.17 0.929 B_Naive1 L2
ENSG00000136014 USP44 -726922 sc-eQTL 5.82e-01 -0.093 0.169 0.929 B_Naive1 L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 1.35e-01 -0.212 0.141 0.929 B_Naive1 L2
ENSG00000173588 CEP83 364566 sc-eQTL 5.66e-01 -0.0842 0.146 0.929 B_Naive1 L2
ENSG00000180263 FGD6 -392928 sc-eQTL 7.94e-01 -0.0419 0.16 0.929 B_Naive1 L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 5.29e-01 -0.0589 0.0934 0.929 B_Naive1 L2
ENSG00000028203 VEZT -393192 sc-eQTL 9.94e-01 -0.00136 0.179 0.929 B_Naive2 L2
ENSG00000057704 TMCC3 173997 sc-eQTL 1.53e-01 0.234 0.163 0.929 B_Naive2 L2
ENSG00000111142 METAP2 -648966 sc-eQTL 4.77e-01 -0.118 0.165 0.929 B_Naive2 L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 2.81e-02 -0.396 0.179 0.929 B_Naive2 L2
ENSG00000136014 USP44 -726922 sc-eQTL 9.74e-01 -0.0054 0.166 0.929 B_Naive2 L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 9.98e-02 -0.252 0.152 0.929 B_Naive2 L2
ENSG00000173588 CEP83 364566 sc-eQTL 8.28e-01 0.0352 0.162 0.929 B_Naive2 L2
ENSG00000180263 FGD6 -392928 sc-eQTL 2.55e-01 0.154 0.135 0.929 B_Naive2 L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 7.70e-01 0.039 0.133 0.929 B_Naive2 L2
ENSG00000028203 VEZT -393192 sc-eQTL 3.90e-01 -0.15 0.174 0.932 CD4_CTL L2
ENSG00000111142 METAP2 -648966 sc-eQTL 9.08e-01 -0.0211 0.182 0.932 CD4_CTL L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 1.46e-01 0.265 0.181 0.932 CD4_CTL L2
ENSG00000136014 USP44 -726922 sc-eQTL 8.56e-02 -0.248 0.144 0.932 CD4_CTL L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 9.01e-01 -0.0203 0.162 0.932 CD4_CTL L2
ENSG00000173588 CEP83 364566 sc-eQTL 7.92e-02 -0.291 0.165 0.932 CD4_CTL L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 9.56e-01 0.0083 0.15 0.932 CD4_CTL L2
ENSG00000028203 VEZT -393192 sc-eQTL 5.71e-01 0.0761 0.134 0.929 CD4_Naive L2
ENSG00000111142 METAP2 -648966 sc-eQTL 6.05e-01 0.0601 0.116 0.929 CD4_Naive L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 2.13e-01 0.177 0.141 0.929 CD4_Naive L2
ENSG00000136014 USP44 -726922 sc-eQTL 8.65e-01 -0.0278 0.163 0.929 CD4_Naive L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 3.49e-01 0.104 0.111 0.929 CD4_Naive L2
ENSG00000173588 CEP83 364566 sc-eQTL 7.93e-01 -0.0317 0.12 0.929 CD4_Naive L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 4.17e-01 0.084 0.103 0.929 CD4_Naive L2
ENSG00000028203 VEZT -393192 sc-eQTL 2.31e-01 -0.168 0.14 0.929 CD4_TCM L2
ENSG00000111142 METAP2 -648966 sc-eQTL 5.50e-01 -0.0785 0.131 0.929 CD4_TCM L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 2.16e-01 0.189 0.152 0.929 CD4_TCM L2
ENSG00000136014 USP44 -726922 sc-eQTL 7.51e-01 -0.0565 0.178 0.929 CD4_TCM L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 8.15e-01 0.0307 0.131 0.929 CD4_TCM L2
ENSG00000173588 CEP83 364566 sc-eQTL 5.32e-01 -0.0871 0.139 0.929 CD4_TCM L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 8.56e-01 0.0218 0.12 0.929 CD4_TCM L2
ENSG00000028203 VEZT -393192 sc-eQTL 5.37e-01 -0.111 0.18 0.929 CD4_TEM L2
ENSG00000111142 METAP2 -648966 sc-eQTL 5.92e-01 -0.0855 0.159 0.929 CD4_TEM L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 6.99e-01 0.0648 0.167 0.929 CD4_TEM L2
ENSG00000136014 USP44 -726922 sc-eQTL 4.06e-02 0.343 0.167 0.929 CD4_TEM L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 9.23e-01 0.0139 0.144 0.929 CD4_TEM L2
ENSG00000173588 CEP83 364566 sc-eQTL 7.79e-01 -0.0454 0.161 0.929 CD4_TEM L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 1.85e-01 0.193 0.145 0.929 CD4_TEM L2
ENSG00000028203 VEZT -393192 sc-eQTL 8.76e-02 -0.271 0.158 0.929 CD8_CTL L2
ENSG00000057704 TMCC3 173997 sc-eQTL 3.18e-01 0.14 0.14 0.929 CD8_CTL L2
ENSG00000111142 METAP2 -648966 sc-eQTL 7.31e-01 0.0548 0.159 0.929 CD8_CTL L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 8.20e-01 0.0401 0.176 0.929 CD8_CTL L2
ENSG00000136014 USP44 -726922 sc-eQTL 4.91e-01 -0.116 0.169 0.929 CD8_CTL L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 6.08e-01 -0.074 0.144 0.929 CD8_CTL L2
ENSG00000173588 CEP83 364566 sc-eQTL 8.77e-01 -0.0247 0.159 0.929 CD8_CTL L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 7.94e-01 -0.0327 0.125 0.929 CD8_CTL L2
ENSG00000028203 VEZT -393192 sc-eQTL 5.25e-02 -0.315 0.162 0.929 CD8_Naive L2
ENSG00000057704 TMCC3 173997 sc-eQTL 4.55e-01 0.0951 0.127 0.929 CD8_Naive L2
ENSG00000111142 METAP2 -648966 sc-eQTL 5.39e-01 0.0906 0.147 0.929 CD8_Naive L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 2.53e-01 -0.187 0.163 0.929 CD8_Naive L2
ENSG00000136014 USP44 -726922 sc-eQTL 5.24e-01 0.0942 0.148 0.929 CD8_Naive L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 9.95e-01 -0.001 0.149 0.929 CD8_Naive L2
ENSG00000173588 CEP83 364566 sc-eQTL 6.13e-01 -0.0729 0.144 0.929 CD8_Naive L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 3.03e-01 0.123 0.119 0.929 CD8_Naive L2
ENSG00000028203 VEZT -393192 sc-eQTL 3.43e-01 -0.164 0.173 0.928 CD8_TCM L2
ENSG00000057704 TMCC3 173997 sc-eQTL 8.15e-01 0.0312 0.133 0.928 CD8_TCM L2
ENSG00000111142 METAP2 -648966 sc-eQTL 9.68e-01 -0.00702 0.175 0.928 CD8_TCM L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 1.30e-01 0.266 0.175 0.928 CD8_TCM L2
ENSG00000136014 USP44 -726922 sc-eQTL 8.68e-01 -0.0264 0.158 0.928 CD8_TCM L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 2.54e-01 -0.191 0.166 0.928 CD8_TCM L2
ENSG00000173588 CEP83 364566 sc-eQTL 3.63e-01 0.156 0.171 0.928 CD8_TCM L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 2.73e-01 -0.151 0.137 0.928 CD8_TCM L2
ENSG00000028203 VEZT -393192 sc-eQTL 5.77e-01 -0.102 0.183 0.936 CD8_TEM L2
ENSG00000057704 TMCC3 173997 sc-eQTL 9.37e-01 -0.0124 0.157 0.936 CD8_TEM L2
ENSG00000111142 METAP2 -648966 sc-eQTL 1.12e-01 0.282 0.177 0.936 CD8_TEM L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 8.39e-02 -0.322 0.185 0.936 CD8_TEM L2
ENSG00000136014 USP44 -726922 sc-eQTL 2.90e-01 -0.164 0.155 0.936 CD8_TEM L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 4.28e-01 0.14 0.176 0.936 CD8_TEM L2
ENSG00000173588 CEP83 364566 sc-eQTL 1.60e-01 -0.256 0.181 0.936 CD8_TEM L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 7.58e-01 -0.0479 0.156 0.936 CD8_TEM L2
ENSG00000028203 VEZT -393192 sc-eQTL 1.30e-02 -0.434 0.173 0.929 MAIT L2
ENSG00000057704 TMCC3 173997 sc-eQTL 7.32e-01 0.051 0.149 0.929 MAIT L2
ENSG00000074527 NTN4 -966598 sc-eQTL 5.46e-02 0.26 0.134 0.929 MAIT L2
ENSG00000111142 METAP2 -648966 sc-eQTL 5.50e-02 0.327 0.169 0.929 MAIT L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 6.86e-01 -0.0669 0.166 0.929 MAIT L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 5.23e-01 0.0931 0.146 0.929 MAIT L2
ENSG00000173588 CEP83 364566 sc-eQTL 2.00e-01 0.214 0.166 0.929 MAIT L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 2.31e-01 0.175 0.145 0.929 MAIT L2
ENSG00000028203 VEZT -393192 sc-eQTL 5.10e-02 -0.342 0.174 0.929 NK_CD56bright L2
ENSG00000057704 TMCC3 173997 sc-eQTL 5.87e-01 -0.0916 0.168 0.929 NK_CD56bright L2
ENSG00000111142 METAP2 -648966 sc-eQTL 1.74e-02 0.409 0.17 0.929 NK_CD56bright L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 6.27e-01 -0.0885 0.182 0.929 NK_CD56bright L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 2.38e-01 -0.175 0.148 0.929 NK_CD56bright L2
ENSG00000173588 CEP83 364566 sc-eQTL 7.22e-01 -0.0537 0.151 0.929 NK_CD56bright L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 7.39e-01 0.0481 0.144 0.929 NK_CD56bright L2
ENSG00000028203 VEZT -393192 sc-eQTL 9.13e-01 -0.0189 0.171 0.929 NK_CD56dim L2
ENSG00000057704 TMCC3 173997 sc-eQTL 4.20e-01 0.121 0.149 0.929 NK_CD56dim L2
ENSG00000111142 METAP2 -648966 sc-eQTL 7.04e-01 0.0589 0.155 0.929 NK_CD56dim L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 9.52e-03 0.406 0.155 0.929 NK_CD56dim L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 8.17e-02 0.241 0.137 0.929 NK_CD56dim L2
ENSG00000173588 CEP83 364566 sc-eQTL 8.01e-01 0.0403 0.16 0.929 NK_CD56dim L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 7.98e-01 0.0286 0.112 0.929 NK_CD56dim L2
ENSG00000028203 VEZT -393192 sc-eQTL 5.43e-01 0.117 0.192 0.932 NK_HLA L2
ENSG00000057704 TMCC3 173997 sc-eQTL 3.44e-02 0.359 0.169 0.932 NK_HLA L2
ENSG00000111142 METAP2 -648966 sc-eQTL 1.24e-01 -0.276 0.178 0.932 NK_HLA L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 1.84e-01 0.251 0.188 0.932 NK_HLA L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 8.10e-01 0.0371 0.155 0.932 NK_HLA L2
ENSG00000173588 CEP83 364566 sc-eQTL 9.94e-01 -0.0014 0.177 0.932 NK_HLA L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 9.53e-01 0.00944 0.16 0.932 NK_HLA L2
ENSG00000028203 VEZT -393192 sc-eQTL 7.63e-01 0.0472 0.156 0.929 NK_cytokine L2
ENSG00000057704 TMCC3 173997 sc-eQTL 4.84e-02 0.315 0.159 0.929 NK_cytokine L2
ENSG00000111142 METAP2 -648966 sc-eQTL 3.82e-01 0.139 0.158 0.929 NK_cytokine L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 2.67e-01 -0.182 0.164 0.929 NK_cytokine L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 4.46e-02 -0.284 0.141 0.929 NK_cytokine L2
ENSG00000173588 CEP83 364566 sc-eQTL 3.65e-01 0.148 0.163 0.929 NK_cytokine L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 5.48e-01 0.0685 0.114 0.929 NK_cytokine L2
ENSG00000028203 VEZT -393192 sc-eQTL 1.99e-01 -0.265 0.205 0.922 PB L2
ENSG00000057704 TMCC3 173997 sc-eQTL 8.30e-01 0.0401 0.186 0.922 PB L2
ENSG00000111142 METAP2 -648966 sc-eQTL 8.63e-01 -0.0357 0.206 0.922 PB L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 4.69e-01 0.142 0.195 0.922 PB L2
ENSG00000136014 USP44 -726922 sc-eQTL 9.29e-02 -0.308 0.182 0.922 PB L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 7.16e-01 -0.0694 0.19 0.922 PB L2
ENSG00000173588 CEP83 364566 sc-eQTL 1.18e-01 0.309 0.196 0.922 PB L2
ENSG00000180263 FGD6 -392928 sc-eQTL 6.04e-01 0.0856 0.164 0.922 PB L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 7.78e-01 0.0327 0.116 0.922 PB L2
ENSG00000028203 VEZT -393192 sc-eQTL 7.64e-01 -0.0495 0.165 0.928 Pro_T L2
ENSG00000057704 TMCC3 173997 sc-eQTL 3.73e-01 -0.131 0.146 0.928 Pro_T L2
ENSG00000074527 NTN4 -966598 sc-eQTL 6.45e-01 0.0553 0.12 0.928 Pro_T L2
ENSG00000111142 METAP2 -648966 sc-eQTL 9.56e-01 0.00773 0.141 0.928 Pro_T L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 5.64e-01 -0.0983 0.17 0.928 Pro_T L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 9.14e-01 -0.018 0.167 0.928 Pro_T L2
ENSG00000173588 CEP83 364566 sc-eQTL 7.35e-01 0.0561 0.165 0.928 Pro_T L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 1.07e-01 -0.166 0.103 0.928 Pro_T L2
ENSG00000028203 VEZT -393192 sc-eQTL 8.01e-01 0.0431 0.171 0.929 Treg L2
ENSG00000111142 METAP2 -648966 sc-eQTL 1.34e-01 0.241 0.16 0.929 Treg L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 6.40e-01 -0.0798 0.17 0.929 Treg L2
ENSG00000136014 USP44 -726922 sc-eQTL 3.18e-01 -0.152 0.152 0.929 Treg L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 2.53e-01 0.179 0.157 0.929 Treg L2
ENSG00000173588 CEP83 364566 sc-eQTL 2.97e-01 -0.175 0.168 0.929 Treg L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 5.83e-01 0.0708 0.129 0.929 Treg L2
ENSG00000028203 VEZT -393192 sc-eQTL 7.43e-01 0.055 0.167 0.929 cDC L2
ENSG00000057704 TMCC3 173997 sc-eQTL 5.97e-01 0.0952 0.18 0.929 cDC L2
ENSG00000111142 METAP2 -648966 sc-eQTL 6.02e-01 0.0955 0.183 0.929 cDC L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 7.12e-01 -0.0652 0.176 0.929 cDC L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 2.51e-01 0.181 0.157 0.929 cDC L2
ENSG00000173588 CEP83 364566 sc-eQTL 9.85e-02 -0.243 0.146 0.929 cDC L2
ENSG00000180263 FGD6 -392928 sc-eQTL 5.02e-01 -0.114 0.169 0.929 cDC L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 1.85e-01 0.191 0.143 0.929 cDC L2
ENSG00000028203 VEZT -393192 sc-eQTL 9.62e-01 -0.00828 0.173 0.929 cMono_IL1B L2
ENSG00000057704 TMCC3 173997 sc-eQTL 2.80e-02 0.297 0.134 0.929 cMono_IL1B L2
ENSG00000111142 METAP2 -648966 sc-eQTL 1.33e-01 0.223 0.148 0.929 cMono_IL1B L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 9.15e-01 -0.0167 0.157 0.929 cMono_IL1B L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 1.17e-01 0.187 0.119 0.929 cMono_IL1B L2
ENSG00000173588 CEP83 364566 sc-eQTL 1.07e-01 -0.262 0.162 0.929 cMono_IL1B L2
ENSG00000180263 FGD6 -392928 sc-eQTL 5.51e-02 -0.266 0.138 0.929 cMono_IL1B L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 8.78e-01 -0.0151 0.0987 0.929 cMono_IL1B L2
ENSG00000028203 VEZT -393192 sc-eQTL 2.51e-01 -0.201 0.175 0.929 cMono_S100A L2
ENSG00000057704 TMCC3 173997 sc-eQTL 5.04e-01 0.103 0.153 0.929 cMono_S100A L2
ENSG00000111142 METAP2 -648966 sc-eQTL 6.61e-01 0.0745 0.169 0.929 cMono_S100A L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 4.95e-01 -0.114 0.167 0.929 cMono_S100A L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 7.11e-01 0.0464 0.125 0.929 cMono_S100A L2
ENSG00000173588 CEP83 364566 sc-eQTL 2.46e-01 -0.205 0.176 0.929 cMono_S100A L2
ENSG00000180263 FGD6 -392928 sc-eQTL 2.27e-01 -0.196 0.161 0.929 cMono_S100A L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 2.84e-01 -0.124 0.115 0.929 cMono_S100A L2
ENSG00000028203 VEZT -393192 sc-eQTL 5.50e-01 -0.125 0.209 0.924 gdT L2
ENSG00000057704 TMCC3 173997 sc-eQTL 8.12e-01 0.038 0.16 0.924 gdT L2
ENSG00000074527 NTN4 -966598 sc-eQTL 4.57e-01 0.118 0.158 0.924 gdT L2
ENSG00000111142 METAP2 -648966 sc-eQTL 9.38e-02 0.332 0.197 0.924 gdT L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 8.79e-01 -0.0323 0.212 0.924 gdT L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 8.34e-01 0.0423 0.201 0.924 gdT L2
ENSG00000173588 CEP83 364566 sc-eQTL 6.66e-01 -0.0851 0.197 0.924 gdT L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 2.28e-01 0.206 0.17 0.924 gdT L2
ENSG00000028203 VEZT -393192 sc-eQTL 5.07e-02 -0.361 0.183 0.931 intMono L2
ENSG00000057704 TMCC3 173997 sc-eQTL 6.51e-01 -0.0812 0.179 0.931 intMono L2
ENSG00000111142 METAP2 -648966 sc-eQTL 5.81e-01 0.104 0.188 0.931 intMono L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 2.31e-01 0.211 0.175 0.931 intMono L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 8.83e-01 0.0222 0.151 0.931 intMono L2
ENSG00000173588 CEP83 364566 sc-eQTL 2.88e-01 -0.194 0.182 0.931 intMono L2
ENSG00000180263 FGD6 -392928 sc-eQTL 5.11e-01 0.108 0.164 0.931 intMono L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 6.91e-01 -0.0466 0.117 0.931 intMono L2
ENSG00000028203 VEZT -393192 sc-eQTL 9.17e-01 0.0171 0.164 0.925 ncMono L2
ENSG00000057704 TMCC3 173997 sc-eQTL 9.17e-01 0.0165 0.158 0.925 ncMono L2
ENSG00000111142 METAP2 -648966 sc-eQTL 3.20e-01 -0.171 0.172 0.925 ncMono L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 4.63e-01 0.125 0.171 0.925 ncMono L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 1.38e-01 0.161 0.108 0.925 ncMono L2
ENSG00000173588 CEP83 364566 sc-eQTL 5.20e-01 -0.11 0.17 0.925 ncMono L2
ENSG00000180263 FGD6 -392928 sc-eQTL 2.92e-01 0.17 0.161 0.925 ncMono L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 6.54e-01 -0.0645 0.144 0.925 ncMono L2
ENSG00000028203 VEZT -393192 sc-eQTL 9.37e-01 -0.0146 0.185 0.921 pDC L2
ENSG00000057704 TMCC3 173997 sc-eQTL 1.71e-02 0.426 0.177 0.921 pDC L2
ENSG00000111142 METAP2 -648966 sc-eQTL 7.79e-01 0.053 0.188 0.921 pDC L2
ENSG00000120798 NR2C1 -249074 sc-eQTL 4.17e-01 0.151 0.186 0.921 pDC L2
ENSG00000136040 PLXNC1 675977 sc-eQTL 3.89e-01 0.155 0.179 0.921 pDC L2
ENSG00000173588 CEP83 364566 sc-eQTL 2.73e-02 0.423 0.19 0.921 pDC L2
ENSG00000180263 FGD6 -392928 sc-eQTL 6.95e-01 -0.0636 0.162 0.921 pDC L2
ENSG00000184752 NDUFA12 -179194 sc-eQTL 2.78e-01 -0.173 0.159 0.921 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -393192 sc-eQTL 6.17e-02 -0.312 0.166 0.929 B_Memory LOneK1K
ENSG00000057704 TMCC3 173997 sc-eQTL 4.40e-01 0.137 0.177 0.929 B_Memory LOneK1K
ENSG00000111142 METAP2 -648966 sc-eQTL 4.82e-01 0.11 0.156 0.929 B_Memory LOneK1K
ENSG00000120798 NR2C1 -249074 sc-eQTL 6.82e-01 0.0737 0.179 0.929 B_Memory LOneK1K
ENSG00000136014 USP44 -726922 sc-eQTL 2.84e-01 0.178 0.166 0.929 B_Memory LOneK1K
ENSG00000136040 PLXNC1 675977 sc-eQTL 7.65e-01 -0.0321 0.107 0.929 B_Memory LOneK1K
ENSG00000173588 CEP83 364566 sc-eQTL 3.17e-01 0.149 0.149 0.929 B_Memory LOneK1K
ENSG00000180263 FGD6 -392928 sc-eQTL 1.47e-01 0.215 0.148 0.929 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -179194 sc-eQTL 8.53e-02 0.176 0.102 0.929 B_Memory LOneK1K
ENSG00000028203 VEZT -393192 sc-eQTL 2.57e-01 -0.179 0.157 0.929 B_Naive LOneK1K
ENSG00000057704 TMCC3 173997 sc-eQTL 4.25e-01 -0.128 0.16 0.929 B_Naive LOneK1K
ENSG00000111142 METAP2 -648966 sc-eQTL 9.60e-01 0.00667 0.132 0.929 B_Naive LOneK1K
ENSG00000120798 NR2C1 -249074 sc-eQTL 9.11e-01 0.0191 0.171 0.929 B_Naive LOneK1K
ENSG00000136014 USP44 -726922 sc-eQTL 9.11e-01 -0.017 0.152 0.929 B_Naive LOneK1K
ENSG00000136040 PLXNC1 675977 sc-eQTL 6.16e-02 -0.242 0.129 0.929 B_Naive LOneK1K
ENSG00000173588 CEP83 364566 sc-eQTL 6.73e-01 -0.0573 0.135 0.929 B_Naive LOneK1K
ENSG00000180263 FGD6 -392928 sc-eQTL 8.70e-01 0.0274 0.167 0.929 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -179194 sc-eQTL 3.51e-01 -0.0861 0.0922 0.929 B_Naive LOneK1K
ENSG00000028203 VEZT -393192 sc-eQTL 5.39e-01 -0.0978 0.159 0.929 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 173997 sc-eQTL 5.90e-02 0.237 0.125 0.929 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -648966 sc-eQTL 2.70e-01 0.15 0.136 0.929 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -249074 sc-eQTL 5.73e-01 -0.0835 0.148 0.929 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 675977 sc-eQTL 1.55e-01 0.159 0.111 0.929 CD14_Mono LOneK1K
ENSG00000173588 CEP83 364566 sc-eQTL 9.32e-03 -0.393 0.15 0.929 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -392928 sc-eQTL 4.28e-02 -0.277 0.136 0.929 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -179194 sc-eQTL 5.93e-01 -0.0505 0.0943 0.929 CD14_Mono LOneK1K
ENSG00000028203 VEZT -393192 sc-eQTL 1.77e-01 -0.234 0.173 0.929 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 173997 sc-eQTL 8.44e-01 0.0317 0.161 0.929 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -648966 sc-eQTL 5.74e-01 -0.0896 0.159 0.929 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -249074 sc-eQTL 3.87e-01 0.154 0.178 0.929 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 675977 sc-eQTL 1.98e-01 0.132 0.102 0.929 CD16_Mono LOneK1K
ENSG00000173588 CEP83 364566 sc-eQTL 3.39e-01 -0.163 0.17 0.929 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -392928 sc-eQTL 2.46e-01 0.169 0.145 0.929 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -179194 sc-eQTL 8.07e-01 -0.0285 0.116 0.929 CD16_Mono LOneK1K
ENSG00000028203 VEZT -393192 sc-eQTL 3.04e-01 0.162 0.158 0.929 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 173997 sc-eQTL 1.86e-01 0.195 0.147 0.929 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -648966 sc-eQTL 8.96e-01 0.0166 0.126 0.929 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -249074 sc-eQTL 3.75e-02 0.297 0.142 0.929 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 675977 sc-eQTL 8.98e-01 0.0161 0.126 0.929 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 364566 sc-eQTL 3.37e-01 0.136 0.141 0.929 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -179194 sc-eQTL 7.67e-01 0.0308 0.104 0.929 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111142 METAP2 -648966 eQTL 0.0455 0.0306 0.0153 0.0 0.0 0.0888
ENSG00000180263 FGD6 -392928 eQTL 0.0155 0.0802 0.0331 0.0 0.0 0.0888

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000136040 \N 675977 4.21e-07 2.67e-07 7.72e-08 2.79e-07 1.03e-07 1.13e-07 3.42e-07 7.12e-08 2.35e-07 1.37e-07 3.32e-07 1.91e-07 4.27e-07 8.26e-08 9.2e-08 1.17e-07 9.3e-08 2.75e-07 9.71e-08 7.26e-08 1.34e-07 2.15e-07 2.11e-07 5.01e-08 3.98e-07 1.94e-07 1.48e-07 1.7e-07 1.58e-07 2.39e-07 1.86e-07 4.75e-08 4.97e-08 1.03e-07 1.01e-07 5.05e-08 8.75e-08 6.11e-08 4.72e-08 7.5e-08 3.24e-08 2.91e-07 3.65e-08 1.62e-08 9.64e-08 1.05e-08 7.8e-08 0.0 4.61e-08