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Genes within 1Mb (chr12:94814183:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -403563 sc-eQTL 9.68e-01 0.0034 0.0856 0.78 B L1
ENSG00000057704 TMCC3 163626 sc-eQTL 5.81e-02 0.19 0.0997 0.78 B L1
ENSG00000111142 METAP2 -659337 sc-eQTL 3.50e-01 0.0704 0.0752 0.78 B L1
ENSG00000120798 NR2C1 -259445 sc-eQTL 4.06e-01 -0.0791 0.095 0.78 B L1
ENSG00000136014 USP44 -737293 sc-eQTL 4.89e-01 -0.0601 0.0867 0.78 B L1
ENSG00000136040 PLXNC1 665606 sc-eQTL 5.88e-01 -0.0309 0.057 0.78 B L1
ENSG00000173588 CEP83 354195 sc-eQTL 4.33e-02 0.145 0.0713 0.78 B L1
ENSG00000180263 FGD6 -403299 sc-eQTL 4.76e-01 0.062 0.0869 0.78 B L1
ENSG00000184752 NDUFA12 -189565 sc-eQTL 1.13e-01 0.0656 0.0413 0.78 B L1
ENSG00000028203 VEZT -403563 sc-eQTL 8.99e-01 0.00906 0.0711 0.78 CD4T L1
ENSG00000111142 METAP2 -659337 sc-eQTL 5.18e-02 0.12 0.0611 0.78 CD4T L1
ENSG00000120798 NR2C1 -259445 sc-eQTL 1.30e-01 0.104 0.0683 0.78 CD4T L1
ENSG00000136014 USP44 -737293 sc-eQTL 9.97e-01 0.0003 0.0938 0.78 CD4T L1
ENSG00000136040 PLXNC1 665606 sc-eQTL 6.59e-01 0.0266 0.0603 0.78 CD4T L1
ENSG00000173588 CEP83 354195 sc-eQTL 2.93e-01 -0.0664 0.0631 0.78 CD4T L1
ENSG00000184752 NDUFA12 -189565 sc-eQTL 8.72e-03 0.173 0.0652 0.78 CD4T L1
ENSG00000028203 VEZT -403563 sc-eQTL 1.04e-01 -0.14 0.086 0.78 CD8T L1
ENSG00000057704 TMCC3 163626 sc-eQTL 1.24e-01 0.0894 0.0579 0.78 CD8T L1
ENSG00000111142 METAP2 -659337 sc-eQTL 8.89e-01 0.0103 0.0741 0.78 CD8T L1
ENSG00000120798 NR2C1 -259445 sc-eQTL 8.64e-01 0.0161 0.0942 0.78 CD8T L1
ENSG00000136014 USP44 -737293 sc-eQTL 9.05e-01 0.01 0.0843 0.78 CD8T L1
ENSG00000136040 PLXNC1 665606 sc-eQTL 2.07e-01 -0.101 0.0799 0.78 CD8T L1
ENSG00000173588 CEP83 354195 sc-eQTL 2.51e-01 -0.0859 0.0746 0.78 CD8T L1
ENSG00000184752 NDUFA12 -189565 sc-eQTL 4.66e-01 0.0447 0.0612 0.78 CD8T L1
ENSG00000028203 VEZT -403563 sc-eQTL 3.87e-01 -0.0883 0.102 0.777 DC L1
ENSG00000057704 TMCC3 163626 sc-eQTL 8.46e-02 0.186 0.107 0.777 DC L1
ENSG00000111142 METAP2 -659337 sc-eQTL 4.38e-01 -0.0831 0.107 0.777 DC L1
ENSG00000120798 NR2C1 -259445 sc-eQTL 2.28e-01 0.125 0.103 0.777 DC L1
ENSG00000136040 PLXNC1 665606 sc-eQTL 6.81e-01 0.0398 0.0967 0.777 DC L1
ENSG00000173588 CEP83 354195 sc-eQTL 5.50e-01 0.0515 0.0861 0.777 DC L1
ENSG00000180263 FGD6 -403299 sc-eQTL 4.17e-01 0.0779 0.0958 0.777 DC L1
ENSG00000184752 NDUFA12 -189565 sc-eQTL 1.81e-02 0.19 0.0797 0.777 DC L1
ENSG00000028203 VEZT -403563 sc-eQTL 6.42e-01 -0.0442 0.0948 0.78 Mono L1
ENSG00000057704 TMCC3 163626 sc-eQTL 8.69e-01 0.0121 0.0737 0.78 Mono L1
ENSG00000111142 METAP2 -659337 sc-eQTL 5.98e-01 0.0398 0.0755 0.78 Mono L1
ENSG00000120798 NR2C1 -259445 sc-eQTL 2.79e-01 0.0974 0.0898 0.78 Mono L1
ENSG00000136040 PLXNC1 665606 sc-eQTL 4.55e-02 0.122 0.0606 0.78 Mono L1
ENSG00000173588 CEP83 354195 sc-eQTL 1.11e-02 -0.228 0.089 0.78 Mono L1
ENSG00000180263 FGD6 -403299 sc-eQTL 7.78e-01 0.0227 0.0805 0.78 Mono L1
ENSG00000184752 NDUFA12 -189565 sc-eQTL 4.96e-04 0.199 0.0562 0.78 Mono L1
ENSG00000028203 VEZT -403563 sc-eQTL 9.93e-01 0.000817 0.094 0.779 NK L1
ENSG00000057704 TMCC3 163626 sc-eQTL 3.21e-01 0.0879 0.0884 0.779 NK L1
ENSG00000111142 METAP2 -659337 sc-eQTL 7.49e-01 -0.0238 0.0743 0.779 NK L1
ENSG00000120798 NR2C1 -259445 sc-eQTL 4.24e-01 0.0704 0.0879 0.779 NK L1
ENSG00000136040 PLXNC1 665606 sc-eQTL 5.36e-01 0.0449 0.0725 0.779 NK L1
ENSG00000173588 CEP83 354195 sc-eQTL 1.25e-01 0.126 0.082 0.779 NK L1
ENSG00000184752 NDUFA12 -189565 sc-eQTL 2.57e-02 0.135 0.0601 0.779 NK L1
ENSG00000028203 VEZT -403563 sc-eQTL 6.85e-01 0.0423 0.104 0.78 Other_T L1
ENSG00000057704 TMCC3 163626 sc-eQTL 1.17e-01 0.139 0.0882 0.78 Other_T L1
ENSG00000074527 NTN4 -976969 sc-eQTL 2.41e-02 0.176 0.0776 0.78 Other_T L1
ENSG00000111142 METAP2 -659337 sc-eQTL 9.67e-01 0.00333 0.081 0.78 Other_T L1
ENSG00000120798 NR2C1 -259445 sc-eQTL 9.69e-02 -0.168 0.1 0.78 Other_T L1
ENSG00000136040 PLXNC1 665606 sc-eQTL 5.84e-01 -0.045 0.082 0.78 Other_T L1
ENSG00000173588 CEP83 354195 sc-eQTL 9.95e-01 0.000569 0.0924 0.78 Other_T L1
ENSG00000184752 NDUFA12 -189565 sc-eQTL 9.28e-03 0.133 0.0506 0.78 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -403563 sc-eQTL 6.40e-01 0.0552 0.118 0.783 B_Activated L2
ENSG00000057704 TMCC3 163626 sc-eQTL 4.02e-01 0.0843 0.1 0.783 B_Activated L2
ENSG00000111142 METAP2 -659337 sc-eQTL 5.44e-01 -0.0747 0.123 0.783 B_Activated L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 4.27e-01 0.0937 0.118 0.783 B_Activated L2
ENSG00000136014 USP44 -737293 sc-eQTL 8.15e-01 0.0211 0.0899 0.783 B_Activated L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 3.22e-01 0.0941 0.0947 0.783 B_Activated L2
ENSG00000173588 CEP83 354195 sc-eQTL 1.99e-01 0.152 0.118 0.783 B_Activated L2
ENSG00000180263 FGD6 -403299 sc-eQTL 1.60e-01 -0.117 0.0829 0.783 B_Activated L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 8.60e-01 0.0184 0.104 0.783 B_Activated L2
ENSG00000028203 VEZT -403563 sc-eQTL 6.32e-01 -0.0498 0.104 0.783 B_Intermediate L2
ENSG00000057704 TMCC3 163626 sc-eQTL 9.26e-01 0.00972 0.105 0.783 B_Intermediate L2
ENSG00000111142 METAP2 -659337 sc-eQTL 3.52e-02 0.201 0.0949 0.783 B_Intermediate L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 5.43e-02 -0.202 0.104 0.783 B_Intermediate L2
ENSG00000136014 USP44 -737293 sc-eQTL 9.07e-01 0.0127 0.108 0.783 B_Intermediate L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 9.61e-01 -0.00428 0.0885 0.783 B_Intermediate L2
ENSG00000173588 CEP83 354195 sc-eQTL 4.63e-01 0.072 0.0979 0.783 B_Intermediate L2
ENSG00000180263 FGD6 -403299 sc-eQTL 4.05e-01 0.0802 0.0961 0.783 B_Intermediate L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 1.12e-02 0.201 0.0784 0.783 B_Intermediate L2
ENSG00000028203 VEZT -403563 sc-eQTL 4.72e-01 0.0775 0.108 0.778 B_Memory L2
ENSG00000057704 TMCC3 163626 sc-eQTL 2.19e-03 0.331 0.107 0.778 B_Memory L2
ENSG00000111142 METAP2 -659337 sc-eQTL 5.80e-01 -0.0579 0.104 0.778 B_Memory L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 9.55e-01 -0.00634 0.112 0.778 B_Memory L2
ENSG00000136014 USP44 -737293 sc-eQTL 8.75e-01 -0.0158 0.1 0.778 B_Memory L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 7.29e-01 -0.0293 0.0846 0.778 B_Memory L2
ENSG00000173588 CEP83 354195 sc-eQTL 5.29e-01 -0.0622 0.0986 0.778 B_Memory L2
ENSG00000180263 FGD6 -403299 sc-eQTL 1.37e-01 0.148 0.099 0.778 B_Memory L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 3.69e-01 0.072 0.08 0.778 B_Memory L2
ENSG00000028203 VEZT -403563 sc-eQTL 3.87e-01 0.0896 0.103 0.78 B_Naive1 L2
ENSG00000057704 TMCC3 163626 sc-eQTL 5.00e-01 0.0707 0.105 0.78 B_Naive1 L2
ENSG00000111142 METAP2 -659337 sc-eQTL 2.86e-01 0.094 0.0878 0.78 B_Naive1 L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 2.47e-01 0.124 0.107 0.78 B_Naive1 L2
ENSG00000136014 USP44 -737293 sc-eQTL 9.37e-01 0.00844 0.106 0.78 B_Naive1 L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 9.36e-01 -0.00713 0.089 0.78 B_Naive1 L2
ENSG00000173588 CEP83 354195 sc-eQTL 6.10e-01 0.0469 0.0918 0.78 B_Naive1 L2
ENSG00000180263 FGD6 -403299 sc-eQTL 7.89e-01 0.0269 0.101 0.78 B_Naive1 L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 4.72e-01 -0.0422 0.0586 0.78 B_Naive1 L2
ENSG00000028203 VEZT -403563 sc-eQTL 9.03e-03 -0.289 0.11 0.779 B_Naive2 L2
ENSG00000057704 TMCC3 163626 sc-eQTL 5.76e-02 0.193 0.101 0.779 B_Naive2 L2
ENSG00000111142 METAP2 -659337 sc-eQTL 6.32e-01 0.0493 0.103 0.779 B_Naive2 L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 4.12e-01 -0.0924 0.112 0.779 B_Naive2 L2
ENSG00000136014 USP44 -737293 sc-eQTL 7.10e-01 0.0383 0.103 0.779 B_Naive2 L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 1.82e-01 -0.127 0.0948 0.779 B_Naive2 L2
ENSG00000173588 CEP83 354195 sc-eQTL 6.04e-01 0.0521 0.1 0.779 B_Naive2 L2
ENSG00000180263 FGD6 -403299 sc-eQTL 5.68e-01 0.0482 0.0842 0.779 B_Naive2 L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 5.92e-01 0.0444 0.0828 0.779 B_Naive2 L2
ENSG00000028203 VEZT -403563 sc-eQTL 1.71e-01 -0.152 0.11 0.784 CD4_CTL L2
ENSG00000111142 METAP2 -659337 sc-eQTL 6.77e-01 0.0484 0.116 0.784 CD4_CTL L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 9.74e-02 0.192 0.115 0.784 CD4_CTL L2
ENSG00000136014 USP44 -737293 sc-eQTL 6.75e-01 -0.0387 0.0922 0.784 CD4_CTL L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 4.04e-01 0.0865 0.103 0.784 CD4_CTL L2
ENSG00000173588 CEP83 354195 sc-eQTL 5.95e-01 -0.0564 0.106 0.784 CD4_CTL L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 1.88e-02 0.223 0.0941 0.784 CD4_CTL L2
ENSG00000028203 VEZT -403563 sc-eQTL 9.03e-01 -0.00984 0.0805 0.78 CD4_Naive L2
ENSG00000111142 METAP2 -659337 sc-eQTL 5.63e-02 0.133 0.0691 0.78 CD4_Naive L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 8.99e-02 0.144 0.0845 0.78 CD4_Naive L2
ENSG00000136014 USP44 -737293 sc-eQTL 8.86e-01 0.0141 0.098 0.78 CD4_Naive L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 6.31e-01 0.0321 0.0667 0.78 CD4_Naive L2
ENSG00000173588 CEP83 354195 sc-eQTL 3.82e-01 -0.0631 0.0721 0.78 CD4_Naive L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 1.15e-02 0.156 0.061 0.78 CD4_Naive L2
ENSG00000028203 VEZT -403563 sc-eQTL 9.56e-01 -0.00479 0.0861 0.78 CD4_TCM L2
ENSG00000111142 METAP2 -659337 sc-eQTL 3.99e-01 0.068 0.0805 0.78 CD4_TCM L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 6.00e-02 0.176 0.0931 0.78 CD4_TCM L2
ENSG00000136014 USP44 -737293 sc-eQTL 3.28e-01 -0.107 0.109 0.78 CD4_TCM L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 2.58e-01 -0.0908 0.0801 0.78 CD4_TCM L2
ENSG00000173588 CEP83 354195 sc-eQTL 6.87e-01 -0.0346 0.0856 0.78 CD4_TCM L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 5.05e-02 0.144 0.0731 0.78 CD4_TCM L2
ENSG00000028203 VEZT -403563 sc-eQTL 3.89e-01 -0.0963 0.111 0.78 CD4_TEM L2
ENSG00000111142 METAP2 -659337 sc-eQTL 5.69e-01 0.0564 0.0988 0.78 CD4_TEM L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 2.80e-01 -0.112 0.104 0.78 CD4_TEM L2
ENSG00000136014 USP44 -737293 sc-eQTL 2.73e-01 0.115 0.104 0.78 CD4_TEM L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 9.81e-01 0.00217 0.0892 0.78 CD4_TEM L2
ENSG00000173588 CEP83 354195 sc-eQTL 5.27e-01 -0.0634 0.1 0.78 CD4_TEM L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 2.87e-01 0.0963 0.0903 0.78 CD4_TEM L2
ENSG00000028203 VEZT -403563 sc-eQTL 3.42e-02 -0.207 0.0971 0.78 CD8_CTL L2
ENSG00000057704 TMCC3 163626 sc-eQTL 7.39e-01 0.0289 0.0865 0.78 CD8_CTL L2
ENSG00000111142 METAP2 -659337 sc-eQTL 5.82e-01 -0.054 0.0981 0.78 CD8_CTL L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 3.98e-01 0.0919 0.108 0.78 CD8_CTL L2
ENSG00000136014 USP44 -737293 sc-eQTL 3.34e-01 0.101 0.104 0.78 CD8_CTL L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 1.74e-01 -0.121 0.0884 0.78 CD8_CTL L2
ENSG00000173588 CEP83 354195 sc-eQTL 4.25e-01 -0.0781 0.0976 0.78 CD8_CTL L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 8.23e-01 0.0172 0.0769 0.78 CD8_CTL L2
ENSG00000028203 VEZT -403563 sc-eQTL 7.30e-01 -0.0347 0.101 0.78 CD8_Naive L2
ENSG00000057704 TMCC3 163626 sc-eQTL 5.96e-01 0.0417 0.0785 0.78 CD8_Naive L2
ENSG00000111142 METAP2 -659337 sc-eQTL 5.45e-01 -0.0552 0.0909 0.78 CD8_Naive L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 7.39e-01 -0.0337 0.101 0.78 CD8_Naive L2
ENSG00000136014 USP44 -737293 sc-eQTL 9.90e-01 0.0011 0.0912 0.78 CD8_Naive L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 4.95e-01 0.063 0.0921 0.78 CD8_Naive L2
ENSG00000173588 CEP83 354195 sc-eQTL 3.64e-01 -0.0807 0.0888 0.78 CD8_Naive L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 3.51e-01 0.0688 0.0735 0.78 CD8_Naive L2
ENSG00000028203 VEZT -403563 sc-eQTL 4.87e-01 0.0745 0.107 0.78 CD8_TCM L2
ENSG00000057704 TMCC3 163626 sc-eQTL 7.48e-01 -0.0265 0.0826 0.78 CD8_TCM L2
ENSG00000111142 METAP2 -659337 sc-eQTL 4.60e-01 -0.0803 0.109 0.78 CD8_TCM L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 5.07e-01 0.0726 0.109 0.78 CD8_TCM L2
ENSG00000136014 USP44 -737293 sc-eQTL 8.58e-01 -0.0175 0.0981 0.78 CD8_TCM L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 1.31e-01 -0.156 0.103 0.78 CD8_TCM L2
ENSG00000173588 CEP83 354195 sc-eQTL 6.05e-01 0.055 0.106 0.78 CD8_TCM L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 4.17e-01 0.0695 0.0853 0.78 CD8_TCM L2
ENSG00000028203 VEZT -403563 sc-eQTL 5.39e-01 -0.0722 0.117 0.785 CD8_TEM L2
ENSG00000057704 TMCC3 163626 sc-eQTL 3.55e-02 0.212 0.0999 0.785 CD8_TEM L2
ENSG00000111142 METAP2 -659337 sc-eQTL 9.05e-02 0.193 0.113 0.785 CD8_TEM L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 5.04e-01 -0.0803 0.12 0.785 CD8_TEM L2
ENSG00000136014 USP44 -737293 sc-eQTL 8.05e-02 -0.174 0.0989 0.785 CD8_TEM L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 5.93e-01 0.0607 0.113 0.785 CD8_TEM L2
ENSG00000173588 CEP83 354195 sc-eQTL 8.11e-01 -0.028 0.117 0.785 CD8_TEM L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 8.93e-01 -0.0135 0.1 0.785 CD8_TEM L2
ENSG00000028203 VEZT -403563 sc-eQTL 7.81e-01 -0.0306 0.11 0.781 MAIT L2
ENSG00000057704 TMCC3 163626 sc-eQTL 2.76e-02 0.204 0.092 0.781 MAIT L2
ENSG00000074527 NTN4 -976969 sc-eQTL 9.97e-02 0.14 0.0844 0.781 MAIT L2
ENSG00000111142 METAP2 -659337 sc-eQTL 8.00e-01 -0.0271 0.107 0.781 MAIT L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 1.18e-01 -0.162 0.103 0.781 MAIT L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 4.28e-01 -0.0724 0.0911 0.781 MAIT L2
ENSG00000173588 CEP83 354195 sc-eQTL 3.66e-01 0.0946 0.104 0.781 MAIT L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 6.52e-03 0.247 0.0897 0.781 MAIT L2
ENSG00000028203 VEZT -403563 sc-eQTL 3.53e-01 -0.101 0.108 0.771 NK_CD56bright L2
ENSG00000057704 TMCC3 163626 sc-eQTL 5.26e-01 -0.0659 0.104 0.771 NK_CD56bright L2
ENSG00000111142 METAP2 -659337 sc-eQTL 7.28e-01 0.0371 0.107 0.771 NK_CD56bright L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 3.69e-01 -0.101 0.112 0.771 NK_CD56bright L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 1.67e-01 0.127 0.0914 0.771 NK_CD56bright L2
ENSG00000173588 CEP83 354195 sc-eQTL 1.15e-01 0.146 0.0924 0.771 NK_CD56bright L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 4.88e-01 0.0618 0.089 0.771 NK_CD56bright L2
ENSG00000028203 VEZT -403563 sc-eQTL 4.15e-01 0.0855 0.105 0.778 NK_CD56dim L2
ENSG00000057704 TMCC3 163626 sc-eQTL 2.32e-01 0.109 0.0909 0.778 NK_CD56dim L2
ENSG00000111142 METAP2 -659337 sc-eQTL 9.44e-01 -0.00666 0.0945 0.778 NK_CD56dim L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 2.81e-01 0.104 0.096 0.778 NK_CD56dim L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 3.91e-01 0.0725 0.0844 0.778 NK_CD56dim L2
ENSG00000173588 CEP83 354195 sc-eQTL 8.13e-02 0.17 0.097 0.778 NK_CD56dim L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 1.97e-03 0.209 0.0666 0.778 NK_CD56dim L2
ENSG00000028203 VEZT -403563 sc-eQTL 1.48e-01 -0.166 0.114 0.779 NK_HLA L2
ENSG00000057704 TMCC3 163626 sc-eQTL 2.27e-01 0.123 0.101 0.779 NK_HLA L2
ENSG00000111142 METAP2 -659337 sc-eQTL 1.10e-02 -0.27 0.105 0.779 NK_HLA L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 3.03e-01 0.116 0.113 0.779 NK_HLA L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 6.81e-01 0.0379 0.0922 0.779 NK_HLA L2
ENSG00000173588 CEP83 354195 sc-eQTL 3.81e-01 -0.0927 0.106 0.779 NK_HLA L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 9.82e-01 0.00221 0.0953 0.779 NK_HLA L2
ENSG00000028203 VEZT -403563 sc-eQTL 8.89e-01 -0.0136 0.0968 0.778 NK_cytokine L2
ENSG00000057704 TMCC3 163626 sc-eQTL 8.26e-01 -0.0218 0.0993 0.778 NK_cytokine L2
ENSG00000111142 METAP2 -659337 sc-eQTL 6.55e-01 0.044 0.0982 0.778 NK_cytokine L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 7.47e-01 0.0329 0.102 0.778 NK_cytokine L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 1.63e-01 -0.123 0.0876 0.778 NK_cytokine L2
ENSG00000173588 CEP83 354195 sc-eQTL 8.93e-01 0.0136 0.101 0.778 NK_cytokine L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 4.58e-01 0.0524 0.0704 0.778 NK_cytokine L2
ENSG00000028203 VEZT -403563 sc-eQTL 6.68e-01 0.0572 0.133 0.778 PB L2
ENSG00000057704 TMCC3 163626 sc-eQTL 4.24e-01 0.0959 0.12 0.778 PB L2
ENSG00000111142 METAP2 -659337 sc-eQTL 1.66e-01 -0.184 0.132 0.778 PB L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 4.95e-01 0.0864 0.126 0.778 PB L2
ENSG00000136014 USP44 -737293 sc-eQTL 1.24e-03 -0.376 0.114 0.778 PB L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 9.37e-01 -0.00969 0.123 0.778 PB L2
ENSG00000173588 CEP83 354195 sc-eQTL 8.08e-02 0.222 0.126 0.778 PB L2
ENSG00000180263 FGD6 -403299 sc-eQTL 4.01e-01 0.0893 0.106 0.778 PB L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 4.62e-01 0.055 0.0745 0.778 PB L2
ENSG00000028203 VEZT -403563 sc-eQTL 7.33e-01 -0.0346 0.101 0.778 Pro_T L2
ENSG00000057704 TMCC3 163626 sc-eQTL 8.22e-01 0.0204 0.0902 0.778 Pro_T L2
ENSG00000074527 NTN4 -976969 sc-eQTL 6.85e-01 0.0299 0.0736 0.778 Pro_T L2
ENSG00000111142 METAP2 -659337 sc-eQTL 8.58e-01 0.0156 0.0869 0.778 Pro_T L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 9.72e-01 0.00372 0.105 0.778 Pro_T L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 6.11e-01 0.0522 0.103 0.778 Pro_T L2
ENSG00000173588 CEP83 354195 sc-eQTL 8.03e-01 -0.0253 0.102 0.778 Pro_T L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 9.90e-01 0.000829 0.0635 0.778 Pro_T L2
ENSG00000028203 VEZT -403563 sc-eQTL 9.42e-01 0.00779 0.107 0.78 Treg L2
ENSG00000111142 METAP2 -659337 sc-eQTL 6.46e-01 -0.0463 0.1 0.78 Treg L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 3.29e-01 -0.104 0.106 0.78 Treg L2
ENSG00000136014 USP44 -737293 sc-eQTL 1.99e-01 -0.122 0.0948 0.78 Treg L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 2.25e-01 0.119 0.0978 0.78 Treg L2
ENSG00000173588 CEP83 354195 sc-eQTL 9.43e-01 -0.00745 0.105 0.78 Treg L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 1.77e-02 0.19 0.0794 0.78 Treg L2
ENSG00000028203 VEZT -403563 sc-eQTL 5.95e-02 -0.201 0.106 0.788 cDC L2
ENSG00000057704 TMCC3 163626 sc-eQTL 6.83e-01 0.0472 0.116 0.788 cDC L2
ENSG00000111142 METAP2 -659337 sc-eQTL 4.16e-02 -0.238 0.116 0.788 cDC L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 9.98e-01 0.000314 0.113 0.788 cDC L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 7.10e-01 0.0376 0.101 0.788 cDC L2
ENSG00000173588 CEP83 354195 sc-eQTL 6.17e-01 -0.0474 0.0946 0.788 cDC L2
ENSG00000180263 FGD6 -403299 sc-eQTL 1.25e-01 0.167 0.108 0.788 cDC L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 5.49e-02 0.177 0.0916 0.788 cDC L2
ENSG00000028203 VEZT -403563 sc-eQTL 5.41e-01 0.0647 0.106 0.78 cMono_IL1B L2
ENSG00000057704 TMCC3 163626 sc-eQTL 3.84e-01 0.0724 0.0829 0.78 cMono_IL1B L2
ENSG00000111142 METAP2 -659337 sc-eQTL 6.06e-01 0.0471 0.0912 0.78 cMono_IL1B L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 9.98e-01 0.000281 0.0961 0.78 cMono_IL1B L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 4.02e-01 0.0615 0.0731 0.78 cMono_IL1B L2
ENSG00000173588 CEP83 354195 sc-eQTL 1.94e-02 -0.232 0.0985 0.78 cMono_IL1B L2
ENSG00000180263 FGD6 -403299 sc-eQTL 9.46e-01 0.00578 0.0852 0.78 cMono_IL1B L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 1.32e-04 0.228 0.0584 0.78 cMono_IL1B L2
ENSG00000028203 VEZT -403563 sc-eQTL 4.82e-01 -0.0767 0.109 0.78 cMono_S100A L2
ENSG00000057704 TMCC3 163626 sc-eQTL 7.37e-01 -0.0321 0.0954 0.78 cMono_S100A L2
ENSG00000111142 METAP2 -659337 sc-eQTL 9.06e-01 0.0124 0.105 0.78 cMono_S100A L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 7.47e-01 0.0335 0.104 0.78 cMono_S100A L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 2.51e-01 0.0893 0.0776 0.78 cMono_S100A L2
ENSG00000173588 CEP83 354195 sc-eQTL 5.07e-01 -0.073 0.11 0.78 cMono_S100A L2
ENSG00000180263 FGD6 -403299 sc-eQTL 8.73e-01 0.0162 0.101 0.78 cMono_S100A L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 3.44e-01 0.0678 0.0715 0.78 cMono_S100A L2
ENSG00000028203 VEZT -403563 sc-eQTL 8.01e-02 0.225 0.128 0.782 gdT L2
ENSG00000057704 TMCC3 163626 sc-eQTL 7.43e-01 -0.0324 0.0989 0.782 gdT L2
ENSG00000074527 NTN4 -976969 sc-eQTL 1.47e-01 0.142 0.0975 0.782 gdT L2
ENSG00000111142 METAP2 -659337 sc-eQTL 4.41e-01 -0.0947 0.123 0.782 gdT L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 1.13e-01 -0.208 0.13 0.782 gdT L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 8.06e-01 -0.0306 0.125 0.782 gdT L2
ENSG00000173588 CEP83 354195 sc-eQTL 7.66e-01 0.0364 0.122 0.782 gdT L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 6.75e-01 0.0444 0.106 0.782 gdT L2
ENSG00000028203 VEZT -403563 sc-eQTL 2.46e-01 -0.135 0.116 0.782 intMono L2
ENSG00000057704 TMCC3 163626 sc-eQTL 6.13e-01 -0.0572 0.113 0.782 intMono L2
ENSG00000111142 METAP2 -659337 sc-eQTL 6.49e-01 0.054 0.118 0.782 intMono L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 5.76e-01 0.062 0.111 0.782 intMono L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 3.57e-01 0.0878 0.095 0.782 intMono L2
ENSG00000173588 CEP83 354195 sc-eQTL 5.68e-01 -0.0656 0.115 0.782 intMono L2
ENSG00000180263 FGD6 -403299 sc-eQTL 2.94e-02 0.223 0.102 0.782 intMono L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 8.48e-02 0.126 0.073 0.782 intMono L2
ENSG00000028203 VEZT -403563 sc-eQTL 6.33e-01 -0.0499 0.104 0.774 ncMono L2
ENSG00000057704 TMCC3 163626 sc-eQTL 7.19e-01 -0.0362 0.101 0.774 ncMono L2
ENSG00000111142 METAP2 -659337 sc-eQTL 8.73e-01 0.0175 0.11 0.774 ncMono L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 2.40e-01 0.128 0.108 0.774 ncMono L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 5.63e-03 0.19 0.068 0.774 ncMono L2
ENSG00000173588 CEP83 354195 sc-eQTL 4.88e-01 0.0753 0.108 0.774 ncMono L2
ENSG00000180263 FGD6 -403299 sc-eQTL 3.68e-01 0.0926 0.103 0.774 ncMono L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 1.44e-01 0.134 0.0911 0.774 ncMono L2
ENSG00000028203 VEZT -403563 sc-eQTL 4.93e-01 0.0833 0.121 0.78 pDC L2
ENSG00000057704 TMCC3 163626 sc-eQTL 2.58e-02 0.262 0.116 0.78 pDC L2
ENSG00000111142 METAP2 -659337 sc-eQTL 6.55e-01 0.0555 0.124 0.78 pDC L2
ENSG00000120798 NR2C1 -259445 sc-eQTL 3.05e-01 0.126 0.122 0.78 pDC L2
ENSG00000136040 PLXNC1 665606 sc-eQTL 8.37e-01 -0.0242 0.118 0.78 pDC L2
ENSG00000173588 CEP83 354195 sc-eQTL 3.55e-01 0.117 0.126 0.78 pDC L2
ENSG00000180263 FGD6 -403299 sc-eQTL 7.78e-01 0.0301 0.107 0.78 pDC L2
ENSG00000184752 NDUFA12 -189565 sc-eQTL 7.94e-01 -0.0275 0.105 0.78 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -403563 sc-eQTL 9.13e-01 -0.0114 0.105 0.78 B_Memory LOneK1K
ENSG00000057704 TMCC3 163626 sc-eQTL 4.99e-02 0.216 0.109 0.78 B_Memory LOneK1K
ENSG00000111142 METAP2 -659337 sc-eQTL 2.56e-01 0.11 0.0971 0.78 B_Memory LOneK1K
ENSG00000120798 NR2C1 -259445 sc-eQTL 9.63e-02 -0.186 0.111 0.78 B_Memory LOneK1K
ENSG00000136014 USP44 -737293 sc-eQTL 9.87e-01 -0.00164 0.104 0.78 B_Memory LOneK1K
ENSG00000136040 PLXNC1 665606 sc-eQTL 8.55e-01 0.0122 0.0667 0.78 B_Memory LOneK1K
ENSG00000173588 CEP83 354195 sc-eQTL 6.80e-01 0.0385 0.0932 0.78 B_Memory LOneK1K
ENSG00000180263 FGD6 -403299 sc-eQTL 8.17e-02 0.161 0.092 0.78 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -189565 sc-eQTL 2.18e-02 0.146 0.0632 0.78 B_Memory LOneK1K
ENSG00000028203 VEZT -403563 sc-eQTL 2.93e-01 -0.104 0.0983 0.78 B_Naive LOneK1K
ENSG00000057704 TMCC3 163626 sc-eQTL 1.90e-01 0.131 0.0996 0.78 B_Naive LOneK1K
ENSG00000111142 METAP2 -659337 sc-eQTL 2.46e-01 0.0954 0.082 0.78 B_Naive LOneK1K
ENSG00000120798 NR2C1 -259445 sc-eQTL 7.75e-01 0.0306 0.107 0.78 B_Naive LOneK1K
ENSG00000136014 USP44 -737293 sc-eQTL 9.24e-01 0.00902 0.0949 0.78 B_Naive LOneK1K
ENSG00000136040 PLXNC1 665606 sc-eQTL 5.52e-01 -0.0483 0.0811 0.78 B_Naive LOneK1K
ENSG00000173588 CEP83 354195 sc-eQTL 5.03e-01 0.0567 0.0845 0.78 B_Naive LOneK1K
ENSG00000180263 FGD6 -403299 sc-eQTL 7.20e-01 0.0374 0.104 0.78 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -189565 sc-eQTL 7.26e-01 -0.0202 0.0576 0.78 B_Naive LOneK1K
ENSG00000028203 VEZT -403563 sc-eQTL 8.50e-01 -0.0184 0.0973 0.78 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 163626 sc-eQTL 5.64e-01 0.0445 0.077 0.78 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -659337 sc-eQTL 8.35e-01 0.0173 0.0832 0.78 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -259445 sc-eQTL 8.13e-01 0.0214 0.0905 0.78 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 665606 sc-eQTL 1.94e-01 0.0886 0.0681 0.78 CD14_Mono LOneK1K
ENSG00000173588 CEP83 354195 sc-eQTL 2.71e-02 -0.205 0.092 0.78 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -403299 sc-eQTL 7.24e-01 0.0298 0.084 0.78 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -189565 sc-eQTL 1.54e-03 0.181 0.0564 0.78 CD14_Mono LOneK1K
ENSG00000028203 VEZT -403563 sc-eQTL 1.09e-01 -0.173 0.108 0.78 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 163626 sc-eQTL 7.22e-01 -0.0359 0.1 0.78 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -659337 sc-eQTL 7.18e-01 0.0359 0.0993 0.78 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -259445 sc-eQTL 1.63e-01 0.155 0.111 0.78 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 665606 sc-eQTL 5.09e-03 0.178 0.0629 0.78 CD16_Mono LOneK1K
ENSG00000173588 CEP83 354195 sc-eQTL 5.92e-01 -0.0572 0.106 0.78 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -403299 sc-eQTL 7.08e-02 0.164 0.0903 0.78 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -189565 sc-eQTL 3.41e-02 0.153 0.0718 0.78 CD16_Mono LOneK1K
ENSG00000028203 VEZT -403563 sc-eQTL 6.27e-01 0.047 0.0967 0.778 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 163626 sc-eQTL 2.88e-01 0.096 0.0901 0.778 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -659337 sc-eQTL 6.48e-01 -0.0353 0.0772 0.778 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -259445 sc-eQTL 6.76e-02 0.16 0.0869 0.778 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 665606 sc-eQTL 8.00e-01 0.0195 0.0768 0.778 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 354195 sc-eQTL 2.91e-01 0.0912 0.0862 0.778 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -189565 sc-eQTL 1.85e-02 0.149 0.0626 0.778 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000180263 FGD6 -403299 eQTL 0.000562 0.0727 0.021 0.0 0.0 0.283
ENSG00000184752 NDUFA12 -189565 eQTL 8.56e-08 0.104 0.0192 0.0 0.0 0.283

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000180263 FGD6 -403299 1.99e-06 2.43e-06 3.2e-07 1.64e-06 4.53e-07 7.87e-07 1.3e-06 6.28e-07 1.72e-06 7.15e-07 1.99e-06 1.49e-06 3.44e-06 1.16e-06 5.46e-07 1.1e-06 1.17e-06 2.18e-06 1.08e-06 1.31e-06 8.63e-07 2.31e-06 1.64e-06 8.41e-07 2.65e-06 9.37e-07 1.15e-06 1.37e-06 1.73e-06 1.86e-06 1.19e-06 3.28e-07 5.19e-07 9.49e-07 9.45e-07 8.58e-07 8.71e-07 4.65e-07 1.12e-06 3.35e-07 2.87e-07 2.32e-06 3.82e-07 1.99e-07 3.4e-07 3.15e-07 6.93e-07 2.44e-07 2.44e-07
ENSG00000184752 NDUFA12 -189565 5.61e-06 6.92e-06 6.31e-07 3.81e-06 1.62e-06 2.09e-06 7.49e-06 1.34e-06 4.49e-06 2.84e-06 8.01e-06 3.23e-06 1.02e-05 2.8e-06 9.41e-07 3.99e-06 3.7e-06 3.71e-06 1.63e-06 1.79e-06 2.75e-06 6.28e-06 4.74e-06 1.73e-06 8.57e-06 2.19e-06 2.95e-06 1.78e-06 5.08e-06 6.4e-06 3.35e-06 4.84e-07 7.8e-07 2.14e-06 2.38e-06 1.49e-06 1.1e-06 1.49e-06 1.25e-06 7.21e-07 6.39e-07 7.23e-06 1.42e-06 1.56e-07 6.09e-07 9.92e-07 1.07e-06 6.82e-07 4.98e-07