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Genes within 1Mb (chr12:94813074:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -404672 sc-eQTL 1.06e-01 0.125 0.0772 0.323 B L1
ENSG00000057704 TMCC3 162517 sc-eQTL 6.03e-01 0.0476 0.0912 0.323 B L1
ENSG00000111142 METAP2 -660446 sc-eQTL 2.03e-01 0.087 0.0681 0.323 B L1
ENSG00000120798 NR2C1 -260554 sc-eQTL 1.55e-01 -0.123 0.0859 0.323 B L1
ENSG00000136014 USP44 -738402 sc-eQTL 9.04e-01 0.00952 0.0788 0.323 B L1
ENSG00000136040 PLXNC1 664497 sc-eQTL 9.98e-01 -0.000136 0.0518 0.323 B L1
ENSG00000173588 CEP83 353086 sc-eQTL 7.37e-01 0.022 0.0653 0.323 B L1
ENSG00000180263 FGD6 -404408 sc-eQTL 3.55e-01 0.073 0.0788 0.323 B L1
ENSG00000184752 NDUFA12 -190674 sc-eQTL 7.53e-01 -0.0119 0.0377 0.323 B L1
ENSG00000028203 VEZT -404672 sc-eQTL 6.17e-01 -0.0325 0.065 0.323 CD4T L1
ENSG00000111142 METAP2 -660446 sc-eQTL 4.34e-01 0.0442 0.0564 0.323 CD4T L1
ENSG00000120798 NR2C1 -260554 sc-eQTL 1.20e-01 0.0975 0.0625 0.323 CD4T L1
ENSG00000136014 USP44 -738402 sc-eQTL 1.83e-01 0.114 0.0855 0.323 CD4T L1
ENSG00000136040 PLXNC1 664497 sc-eQTL 6.11e-01 0.0281 0.0552 0.323 CD4T L1
ENSG00000173588 CEP83 353086 sc-eQTL 8.13e-02 0.101 0.0575 0.323 CD4T L1
ENSG00000184752 NDUFA12 -190674 sc-eQTL 4.70e-04 0.209 0.0589 0.323 CD4T L1
ENSG00000028203 VEZT -404672 sc-eQTL 3.31e-01 0.0754 0.0773 0.323 CD8T L1
ENSG00000057704 TMCC3 162517 sc-eQTL 8.54e-01 0.00959 0.0521 0.323 CD8T L1
ENSG00000111142 METAP2 -660446 sc-eQTL 6.97e-01 0.0259 0.0663 0.323 CD8T L1
ENSG00000120798 NR2C1 -260554 sc-eQTL 4.84e-01 -0.059 0.0842 0.323 CD8T L1
ENSG00000136014 USP44 -738402 sc-eQTL 7.67e-01 0.0224 0.0755 0.323 CD8T L1
ENSG00000136040 PLXNC1 664497 sc-eQTL 1.60e-01 0.101 0.0714 0.323 CD8T L1
ENSG00000173588 CEP83 353086 sc-eQTL 7.46e-01 -0.0217 0.067 0.323 CD8T L1
ENSG00000184752 NDUFA12 -190674 sc-eQTL 1.27e-01 0.0836 0.0545 0.323 CD8T L1
ENSG00000028203 VEZT -404672 sc-eQTL 1.59e-01 -0.13 0.0922 0.324 DC L1
ENSG00000057704 TMCC3 162517 sc-eQTL 8.61e-02 0.168 0.0975 0.324 DC L1
ENSG00000111142 METAP2 -660446 sc-eQTL 3.09e-01 0.099 0.097 0.324 DC L1
ENSG00000120798 NR2C1 -260554 sc-eQTL 2.52e-01 0.108 0.0939 0.324 DC L1
ENSG00000136040 PLXNC1 664497 sc-eQTL 5.21e-01 -0.0564 0.0878 0.324 DC L1
ENSG00000173588 CEP83 353086 sc-eQTL 9.10e-01 -0.0089 0.0783 0.324 DC L1
ENSG00000180263 FGD6 -404408 sc-eQTL 9.10e-01 -0.00991 0.0871 0.324 DC L1
ENSG00000184752 NDUFA12 -190674 sc-eQTL 2.82e-02 0.16 0.0725 0.324 DC L1
ENSG00000028203 VEZT -404672 sc-eQTL 4.70e-01 -0.0607 0.084 0.323 Mono L1
ENSG00000057704 TMCC3 162517 sc-eQTL 1.88e-01 0.086 0.0651 0.323 Mono L1
ENSG00000111142 METAP2 -660446 sc-eQTL 7.60e-01 0.0205 0.067 0.323 Mono L1
ENSG00000120798 NR2C1 -260554 sc-eQTL 1.14e-01 0.126 0.0794 0.323 Mono L1
ENSG00000136040 PLXNC1 664497 sc-eQTL 1.35e-01 -0.0809 0.0539 0.323 Mono L1
ENSG00000173588 CEP83 353086 sc-eQTL 3.96e-01 -0.0681 0.08 0.323 Mono L1
ENSG00000180263 FGD6 -404408 sc-eQTL 1.63e-01 0.0994 0.071 0.323 Mono L1
ENSG00000184752 NDUFA12 -190674 sc-eQTL 2.09e-05 0.214 0.0491 0.323 Mono L1
ENSG00000028203 VEZT -404672 sc-eQTL 3.18e-01 -0.0852 0.0851 0.324 NK L1
ENSG00000057704 TMCC3 162517 sc-eQTL 6.00e-01 -0.0422 0.0804 0.324 NK L1
ENSG00000111142 METAP2 -660446 sc-eQTL 3.58e-01 0.0621 0.0673 0.324 NK L1
ENSG00000120798 NR2C1 -260554 sc-eQTL 4.22e-01 -0.0642 0.0798 0.324 NK L1
ENSG00000136040 PLXNC1 664497 sc-eQTL 9.96e-01 -0.000303 0.0658 0.324 NK L1
ENSG00000173588 CEP83 353086 sc-eQTL 1.60e-01 0.105 0.0745 0.324 NK L1
ENSG00000184752 NDUFA12 -190674 sc-eQTL 3.85e-03 0.158 0.0541 0.324 NK L1
ENSG00000028203 VEZT -404672 sc-eQTL 7.17e-02 -0.17 0.094 0.323 Other_T L1
ENSG00000057704 TMCC3 162517 sc-eQTL 9.64e-01 -0.00365 0.0807 0.323 Other_T L1
ENSG00000074527 NTN4 -978078 sc-eQTL 8.34e-02 0.123 0.0708 0.323 Other_T L1
ENSG00000111142 METAP2 -660446 sc-eQTL 6.07e-01 -0.038 0.0736 0.323 Other_T L1
ENSG00000120798 NR2C1 -260554 sc-eQTL 9.29e-01 0.00822 0.0919 0.323 Other_T L1
ENSG00000136040 PLXNC1 664497 sc-eQTL 6.94e-01 0.0294 0.0746 0.323 Other_T L1
ENSG00000173588 CEP83 353086 sc-eQTL 7.64e-01 -0.0252 0.0839 0.323 Other_T L1
ENSG00000184752 NDUFA12 -190674 sc-eQTL 2.02e-02 0.108 0.0461 0.323 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -404672 sc-eQTL 9.61e-01 -0.00515 0.104 0.332 B_Activated L2
ENSG00000057704 TMCC3 162517 sc-eQTL 3.04e-01 -0.0913 0.0886 0.332 B_Activated L2
ENSG00000111142 METAP2 -660446 sc-eQTL 4.04e-01 -0.0907 0.108 0.332 B_Activated L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 3.74e-01 0.0926 0.104 0.332 B_Activated L2
ENSG00000136014 USP44 -738402 sc-eQTL 8.04e-01 -0.0197 0.0794 0.332 B_Activated L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 6.94e-01 -0.0331 0.0839 0.332 B_Activated L2
ENSG00000173588 CEP83 353086 sc-eQTL 1.36e-01 0.156 0.104 0.332 B_Activated L2
ENSG00000180263 FGD6 -404408 sc-eQTL 1.77e-01 0.0991 0.0732 0.332 B_Activated L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 4.49e-01 -0.0697 0.0919 0.332 B_Activated L2
ENSG00000028203 VEZT -404672 sc-eQTL 5.14e-01 0.0609 0.0932 0.324 B_Intermediate L2
ENSG00000057704 TMCC3 162517 sc-eQTL 2.99e-01 0.098 0.0941 0.324 B_Intermediate L2
ENSG00000111142 METAP2 -660446 sc-eQTL 4.89e-01 0.0596 0.086 0.324 B_Intermediate L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 4.90e-02 -0.185 0.0935 0.324 B_Intermediate L2
ENSG00000136014 USP44 -738402 sc-eQTL 2.43e-01 0.113 0.0964 0.324 B_Intermediate L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 4.12e-01 -0.0653 0.0793 0.324 B_Intermediate L2
ENSG00000173588 CEP83 353086 sc-eQTL 3.61e-01 0.0805 0.0878 0.324 B_Intermediate L2
ENSG00000180263 FGD6 -404408 sc-eQTL 5.91e-01 0.0465 0.0863 0.324 B_Intermediate L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 9.28e-01 -0.00649 0.0715 0.324 B_Intermediate L2
ENSG00000028203 VEZT -404672 sc-eQTL 7.64e-01 0.0296 0.0985 0.323 B_Memory L2
ENSG00000057704 TMCC3 162517 sc-eQTL 6.97e-01 0.0389 0.1 0.323 B_Memory L2
ENSG00000111142 METAP2 -660446 sc-eQTL 6.95e-01 0.0376 0.0956 0.323 B_Memory L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 2.15e-01 -0.127 0.102 0.323 B_Memory L2
ENSG00000136014 USP44 -738402 sc-eQTL 3.97e-01 0.0776 0.0914 0.323 B_Memory L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 3.53e-01 0.0719 0.0773 0.323 B_Memory L2
ENSG00000173588 CEP83 353086 sc-eQTL 8.89e-01 0.0127 0.0903 0.323 B_Memory L2
ENSG00000180263 FGD6 -404408 sc-eQTL 6.77e-02 0.166 0.0904 0.323 B_Memory L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 9.50e-01 0.00456 0.0733 0.323 B_Memory L2
ENSG00000028203 VEZT -404672 sc-eQTL 1.03e-01 0.151 0.0924 0.323 B_Naive1 L2
ENSG00000057704 TMCC3 162517 sc-eQTL 3.63e-01 -0.0856 0.0939 0.323 B_Naive1 L2
ENSG00000111142 METAP2 -660446 sc-eQTL 2.32e-02 0.179 0.0781 0.323 B_Naive1 L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 3.36e-01 0.0928 0.0963 0.323 B_Naive1 L2
ENSG00000136014 USP44 -738402 sc-eQTL 6.40e-01 -0.0446 0.0951 0.323 B_Naive1 L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 7.23e-01 0.0284 0.0799 0.323 B_Naive1 L2
ENSG00000173588 CEP83 353086 sc-eQTL 8.89e-01 -0.0115 0.0825 0.323 B_Naive1 L2
ENSG00000180263 FGD6 -404408 sc-eQTL 9.09e-01 0.0103 0.0904 0.323 B_Naive1 L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 3.60e-01 -0.0483 0.0526 0.323 B_Naive1 L2
ENSG00000028203 VEZT -404672 sc-eQTL 4.17e-02 -0.202 0.0987 0.324 B_Naive2 L2
ENSG00000057704 TMCC3 162517 sc-eQTL 1.53e-02 0.22 0.0898 0.324 B_Naive2 L2
ENSG00000111142 METAP2 -660446 sc-eQTL 8.32e-01 0.0195 0.0921 0.324 B_Naive2 L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 3.49e-01 -0.0944 0.101 0.324 B_Naive2 L2
ENSG00000136014 USP44 -738402 sc-eQTL 9.85e-01 0.0017 0.0921 0.324 B_Naive2 L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 5.34e-01 -0.053 0.0851 0.324 B_Naive2 L2
ENSG00000173588 CEP83 353086 sc-eQTL 7.25e-01 0.0317 0.0899 0.324 B_Naive2 L2
ENSG00000180263 FGD6 -404408 sc-eQTL 4.76e-01 0.0538 0.0754 0.324 B_Naive2 L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 9.02e-01 -0.00916 0.0741 0.324 B_Naive2 L2
ENSG00000028203 VEZT -404672 sc-eQTL 7.60e-01 -0.0297 0.0971 0.325 CD4_CTL L2
ENSG00000111142 METAP2 -660446 sc-eQTL 7.94e-01 -0.0265 0.101 0.325 CD4_CTL L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 2.64e-02 0.225 0.101 0.325 CD4_CTL L2
ENSG00000136014 USP44 -738402 sc-eQTL 6.69e-01 0.0346 0.0807 0.325 CD4_CTL L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 4.99e-01 0.0613 0.0906 0.325 CD4_CTL L2
ENSG00000173588 CEP83 353086 sc-eQTL 7.16e-01 0.0338 0.0928 0.325 CD4_CTL L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 2.56e-02 0.186 0.0825 0.325 CD4_CTL L2
ENSG00000028203 VEZT -404672 sc-eQTL 8.81e-01 -0.011 0.0736 0.323 CD4_Naive L2
ENSG00000111142 METAP2 -660446 sc-eQTL 3.14e-01 0.0642 0.0636 0.323 CD4_Naive L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 2.53e-01 0.0888 0.0776 0.323 CD4_Naive L2
ENSG00000136014 USP44 -738402 sc-eQTL 4.03e-01 0.075 0.0895 0.323 CD4_Naive L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 9.44e-01 0.00429 0.061 0.323 CD4_Naive L2
ENSG00000173588 CEP83 353086 sc-eQTL 8.09e-01 0.016 0.066 0.323 CD4_Naive L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 1.34e-03 0.18 0.0553 0.323 CD4_Naive L2
ENSG00000028203 VEZT -404672 sc-eQTL 7.46e-01 -0.0255 0.0787 0.323 CD4_TCM L2
ENSG00000111142 METAP2 -660446 sc-eQTL 9.29e-01 0.00659 0.0738 0.323 CD4_TCM L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 2.51e-01 0.0985 0.0856 0.323 CD4_TCM L2
ENSG00000136014 USP44 -738402 sc-eQTL 3.03e-01 0.103 0.0997 0.323 CD4_TCM L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 7.01e-01 0.0283 0.0735 0.323 CD4_TCM L2
ENSG00000173588 CEP83 353086 sc-eQTL 1.02e-01 0.128 0.0779 0.323 CD4_TCM L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 1.14e-03 0.217 0.0658 0.323 CD4_TCM L2
ENSG00000028203 VEZT -404672 sc-eQTL 3.67e-01 0.0907 0.1 0.323 CD4_TEM L2
ENSG00000111142 METAP2 -660446 sc-eQTL 5.07e-01 0.0592 0.089 0.323 CD4_TEM L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 2.97e-01 0.0975 0.0933 0.323 CD4_TEM L2
ENSG00000136014 USP44 -738402 sc-eQTL 1.89e-01 0.123 0.0937 0.323 CD4_TEM L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 4.96e-02 0.157 0.0796 0.323 CD4_TEM L2
ENSG00000173588 CEP83 353086 sc-eQTL 3.41e-01 0.0858 0.09 0.323 CD4_TEM L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 1.06e-02 0.207 0.0802 0.323 CD4_TEM L2
ENSG00000028203 VEZT -404672 sc-eQTL 7.53e-01 0.0275 0.0874 0.323 CD8_CTL L2
ENSG00000057704 TMCC3 162517 sc-eQTL 4.06e-01 0.0641 0.077 0.323 CD8_CTL L2
ENSG00000111142 METAP2 -660446 sc-eQTL 2.29e-01 -0.105 0.0872 0.323 CD8_CTL L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 3.81e-01 -0.0849 0.0966 0.323 CD8_CTL L2
ENSG00000136014 USP44 -738402 sc-eQTL 7.80e-01 0.0259 0.0927 0.323 CD8_CTL L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 6.93e-02 0.143 0.0785 0.323 CD8_CTL L2
ENSG00000173588 CEP83 353086 sc-eQTL 6.23e-01 0.0429 0.0871 0.323 CD8_CTL L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 2.81e-01 0.074 0.0684 0.323 CD8_CTL L2
ENSG00000028203 VEZT -404672 sc-eQTL 2.45e-01 -0.104 0.0896 0.323 CD8_Naive L2
ENSG00000057704 TMCC3 162517 sc-eQTL 2.10e-01 0.088 0.0699 0.323 CD8_Naive L2
ENSG00000111142 METAP2 -660446 sc-eQTL 2.61e-01 0.0913 0.0811 0.323 CD8_Naive L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 6.92e-01 -0.0358 0.0902 0.323 CD8_Naive L2
ENSG00000136014 USP44 -738402 sc-eQTL 3.41e-01 0.0776 0.0813 0.323 CD8_Naive L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 8.24e-01 0.0184 0.0824 0.323 CD8_Naive L2
ENSG00000173588 CEP83 353086 sc-eQTL 5.52e-01 -0.0473 0.0794 0.323 CD8_Naive L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 2.78e-01 0.0714 0.0657 0.323 CD8_Naive L2
ENSG00000028203 VEZT -404672 sc-eQTL 2.03e-01 0.124 0.0972 0.326 CD8_TCM L2
ENSG00000057704 TMCC3 162517 sc-eQTL 1.76e-01 0.102 0.0749 0.326 CD8_TCM L2
ENSG00000111142 METAP2 -660446 sc-eQTL 2.48e-01 0.114 0.0987 0.326 CD8_TCM L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 3.29e-01 -0.0973 0.0994 0.326 CD8_TCM L2
ENSG00000136014 USP44 -738402 sc-eQTL 4.23e-01 0.0717 0.0893 0.326 CD8_TCM L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 8.78e-01 -0.0145 0.0943 0.326 CD8_TCM L2
ENSG00000173588 CEP83 353086 sc-eQTL 2.46e-01 0.112 0.0964 0.326 CD8_TCM L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 6.36e-01 0.0369 0.0778 0.326 CD8_TCM L2
ENSG00000028203 VEZT -404672 sc-eQTL 5.05e-01 0.0662 0.0991 0.32 CD8_TEM L2
ENSG00000057704 TMCC3 162517 sc-eQTL 2.87e-01 0.0908 0.085 0.32 CD8_TEM L2
ENSG00000111142 METAP2 -660446 sc-eQTL 1.54e-01 0.137 0.0958 0.32 CD8_TEM L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 8.82e-01 -0.015 0.101 0.32 CD8_TEM L2
ENSG00000136014 USP44 -738402 sc-eQTL 8.61e-01 -0.0147 0.0841 0.32 CD8_TEM L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 7.71e-01 -0.0279 0.0957 0.32 CD8_TEM L2
ENSG00000173588 CEP83 353086 sc-eQTL 9.50e-01 0.00619 0.0988 0.32 CD8_TEM L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 9.60e-01 0.00426 0.0843 0.32 CD8_TEM L2
ENSG00000028203 VEZT -404672 sc-eQTL 1.09e-01 -0.158 0.0981 0.325 MAIT L2
ENSG00000057704 TMCC3 162517 sc-eQTL 6.88e-01 0.0336 0.0835 0.325 MAIT L2
ENSG00000074527 NTN4 -978078 sc-eQTL 1.95e-01 0.0988 0.0759 0.325 MAIT L2
ENSG00000111142 METAP2 -660446 sc-eQTL 4.39e-01 0.0743 0.0959 0.325 MAIT L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 8.41e-01 -0.0187 0.093 0.325 MAIT L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 3.69e-01 -0.0736 0.0817 0.325 MAIT L2
ENSG00000173588 CEP83 353086 sc-eQTL 2.91e-01 -0.099 0.0935 0.325 MAIT L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 6.49e-02 0.151 0.0813 0.325 MAIT L2
ENSG00000028203 VEZT -404672 sc-eQTL 2.93e-01 -0.106 0.101 0.322 NK_CD56bright L2
ENSG00000057704 TMCC3 162517 sc-eQTL 5.31e-01 -0.0607 0.0968 0.322 NK_CD56bright L2
ENSG00000111142 METAP2 -660446 sc-eQTL 6.78e-01 0.0414 0.0995 0.322 NK_CD56bright L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 2.19e-01 -0.128 0.104 0.322 NK_CD56bright L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 7.15e-01 0.0313 0.0856 0.322 NK_CD56bright L2
ENSG00000173588 CEP83 353086 sc-eQTL 9.19e-01 -0.00884 0.0868 0.322 NK_CD56bright L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 6.35e-01 0.0394 0.0831 0.322 NK_CD56bright L2
ENSG00000028203 VEZT -404672 sc-eQTL 3.54e-01 -0.0888 0.0954 0.323 NK_CD56dim L2
ENSG00000057704 TMCC3 162517 sc-eQTL 4.14e-01 0.068 0.0831 0.323 NK_CD56dim L2
ENSG00000111142 METAP2 -660446 sc-eQTL 2.38e-01 0.102 0.086 0.323 NK_CD56dim L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 8.74e-01 0.014 0.0879 0.323 NK_CD56dim L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 7.42e-01 0.0254 0.0772 0.323 NK_CD56dim L2
ENSG00000173588 CEP83 353086 sc-eQTL 2.01e-02 0.206 0.0881 0.323 NK_CD56dim L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 2.24e-04 0.226 0.0603 0.323 NK_CD56dim L2
ENSG00000028203 VEZT -404672 sc-eQTL 3.80e-01 -0.0921 0.105 0.317 NK_HLA L2
ENSG00000057704 TMCC3 162517 sc-eQTL 8.89e-01 0.013 0.0929 0.317 NK_HLA L2
ENSG00000111142 METAP2 -660446 sc-eQTL 7.55e-01 -0.0305 0.0976 0.317 NK_HLA L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 8.81e-01 -0.0154 0.103 0.317 NK_HLA L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 3.44e-01 0.0796 0.0839 0.317 NK_HLA L2
ENSG00000173588 CEP83 353086 sc-eQTL 2.97e-02 -0.209 0.0954 0.317 NK_HLA L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 3.02e-01 0.0898 0.0867 0.317 NK_HLA L2
ENSG00000028203 VEZT -404672 sc-eQTL 7.31e-01 -0.0304 0.0882 0.323 NK_cytokine L2
ENSG00000057704 TMCC3 162517 sc-eQTL 1.57e-01 -0.128 0.09 0.323 NK_cytokine L2
ENSG00000111142 METAP2 -660446 sc-eQTL 3.45e-01 0.0846 0.0893 0.323 NK_cytokine L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 9.18e-01 0.00958 0.0927 0.323 NK_cytokine L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 5.07e-01 -0.0533 0.0801 0.323 NK_cytokine L2
ENSG00000173588 CEP83 353086 sc-eQTL 9.30e-01 0.00804 0.0921 0.323 NK_cytokine L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 6.33e-01 0.0307 0.0642 0.323 NK_cytokine L2
ENSG00000028203 VEZT -404672 sc-eQTL 5.70e-01 0.0691 0.121 0.311 PB L2
ENSG00000057704 TMCC3 162517 sc-eQTL 4.51e-01 -0.0826 0.109 0.311 PB L2
ENSG00000111142 METAP2 -660446 sc-eQTL 2.87e-01 -0.129 0.121 0.311 PB L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 5.36e-01 -0.0714 0.115 0.311 PB L2
ENSG00000136014 USP44 -738402 sc-eQTL 3.67e-01 -0.098 0.108 0.311 PB L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 8.67e-01 -0.0188 0.112 0.311 PB L2
ENSG00000173588 CEP83 353086 sc-eQTL 7.66e-01 0.0347 0.117 0.311 PB L2
ENSG00000180263 FGD6 -404408 sc-eQTL 5.10e-01 0.064 0.0968 0.311 PB L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 7.78e-01 0.0192 0.0681 0.311 PB L2
ENSG00000028203 VEZT -404672 sc-eQTL 4.48e-02 -0.183 0.0908 0.322 Pro_T L2
ENSG00000057704 TMCC3 162517 sc-eQTL 9.13e-01 0.00895 0.0817 0.322 Pro_T L2
ENSG00000074527 NTN4 -978078 sc-eQTL 9.77e-01 -0.00192 0.0667 0.322 Pro_T L2
ENSG00000111142 METAP2 -660446 sc-eQTL 9.97e-01 0.000305 0.0787 0.322 Pro_T L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 7.64e-02 0.168 0.0942 0.322 Pro_T L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 2.85e-01 0.0993 0.0927 0.322 Pro_T L2
ENSG00000173588 CEP83 353086 sc-eQTL 4.41e-01 -0.071 0.0919 0.322 Pro_T L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 6.24e-01 -0.0282 0.0575 0.322 Pro_T L2
ENSG00000028203 VEZT -404672 sc-eQTL 6.32e-01 -0.0457 0.0952 0.323 Treg L2
ENSG00000111142 METAP2 -660446 sc-eQTL 6.20e-01 -0.0446 0.0899 0.323 Treg L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 4.79e-01 0.0675 0.0951 0.323 Treg L2
ENSG00000136014 USP44 -738402 sc-eQTL 8.17e-01 0.0197 0.0852 0.323 Treg L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 5.63e-01 -0.0508 0.0877 0.323 Treg L2
ENSG00000173588 CEP83 353086 sc-eQTL 3.29e-01 0.0917 0.0937 0.323 Treg L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 1.05e-01 0.117 0.0716 0.323 Treg L2
ENSG00000028203 VEZT -404672 sc-eQTL 2.74e-02 -0.205 0.0924 0.329 cDC L2
ENSG00000057704 TMCC3 162517 sc-eQTL 3.21e-01 0.1 0.101 0.329 cDC L2
ENSG00000111142 METAP2 -660446 sc-eQTL 1.81e-01 0.137 0.102 0.329 cDC L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 3.25e-01 0.0973 0.0986 0.329 cDC L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 9.05e-01 -0.0106 0.0882 0.329 cDC L2
ENSG00000173588 CEP83 353086 sc-eQTL 7.29e-01 0.0287 0.0827 0.329 cDC L2
ENSG00000180263 FGD6 -404408 sc-eQTL 9.84e-01 -0.00189 0.095 0.329 cDC L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 5.22e-02 0.156 0.08 0.329 cDC L2
ENSG00000028203 VEZT -404672 sc-eQTL 7.82e-01 -0.0256 0.0926 0.323 cMono_IL1B L2
ENSG00000057704 TMCC3 162517 sc-eQTL 3.60e-02 0.152 0.072 0.323 cMono_IL1B L2
ENSG00000111142 METAP2 -660446 sc-eQTL 1.63e-01 0.111 0.0796 0.323 cMono_IL1B L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 1.79e-01 0.113 0.0839 0.323 cMono_IL1B L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 2.92e-01 -0.0676 0.0641 0.323 cMono_IL1B L2
ENSG00000173588 CEP83 353086 sc-eQTL 3.45e-01 -0.0826 0.0873 0.323 cMono_IL1B L2
ENSG00000180263 FGD6 -404408 sc-eQTL 1.47e-01 0.108 0.0743 0.323 cMono_IL1B L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 3.15e-04 0.188 0.0514 0.323 cMono_IL1B L2
ENSG00000028203 VEZT -404672 sc-eQTL 8.97e-01 -0.0122 0.0944 0.323 cMono_S100A L2
ENSG00000057704 TMCC3 162517 sc-eQTL 4.16e-01 0.0672 0.0826 0.323 cMono_S100A L2
ENSG00000111142 METAP2 -660446 sc-eQTL 9.61e-01 -0.00452 0.0913 0.323 cMono_S100A L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 3.63e-01 0.0818 0.0897 0.323 cMono_S100A L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 2.08e-02 -0.155 0.0666 0.323 cMono_S100A L2
ENSG00000173588 CEP83 353086 sc-eQTL 2.30e-01 0.114 0.095 0.323 cMono_S100A L2
ENSG00000180263 FGD6 -404408 sc-eQTL 9.59e-01 -0.00445 0.0873 0.323 cMono_S100A L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 6.49e-04 0.209 0.0604 0.323 cMono_S100A L2
ENSG00000028203 VEZT -404672 sc-eQTL 4.64e-01 0.0857 0.117 0.324 gdT L2
ENSG00000057704 TMCC3 162517 sc-eQTL 8.59e-01 -0.0159 0.0894 0.324 gdT L2
ENSG00000074527 NTN4 -978078 sc-eQTL 5.31e-03 0.245 0.0864 0.324 gdT L2
ENSG00000111142 METAP2 -660446 sc-eQTL 1.99e-02 -0.256 0.109 0.324 gdT L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 5.03e-01 0.0796 0.119 0.324 gdT L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 5.07e-01 0.0748 0.113 0.324 gdT L2
ENSG00000173588 CEP83 353086 sc-eQTL 6.18e-01 0.0551 0.11 0.324 gdT L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 6.56e-01 -0.0427 0.0957 0.324 gdT L2
ENSG00000028203 VEZT -404672 sc-eQTL 9.98e-01 0.000203 0.101 0.327 intMono L2
ENSG00000057704 TMCC3 162517 sc-eQTL 6.73e-01 -0.0412 0.0976 0.327 intMono L2
ENSG00000111142 METAP2 -660446 sc-eQTL 5.49e-01 -0.0615 0.102 0.327 intMono L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 9.27e-01 0.00875 0.0957 0.327 intMono L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 2.80e-01 -0.089 0.0822 0.327 intMono L2
ENSG00000173588 CEP83 353086 sc-eQTL 1.21e-01 -0.154 0.0987 0.327 intMono L2
ENSG00000180263 FGD6 -404408 sc-eQTL 8.96e-02 0.151 0.0885 0.327 intMono L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 1.84e-02 0.149 0.0628 0.327 intMono L2
ENSG00000028203 VEZT -404672 sc-eQTL 6.43e-01 0.0445 0.0959 0.324 ncMono L2
ENSG00000057704 TMCC3 162517 sc-eQTL 8.42e-01 -0.0184 0.0926 0.324 ncMono L2
ENSG00000111142 METAP2 -660446 sc-eQTL 6.56e-01 0.045 0.101 0.324 ncMono L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 5.24e-01 0.0637 0.0999 0.324 ncMono L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 4.21e-01 0.0513 0.0637 0.324 ncMono L2
ENSG00000173588 CEP83 353086 sc-eQTL 8.43e-01 0.0198 0.0997 0.324 ncMono L2
ENSG00000180263 FGD6 -404408 sc-eQTL 6.13e-01 0.0479 0.0947 0.324 ncMono L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 6.28e-02 0.156 0.0835 0.324 ncMono L2
ENSG00000028203 VEZT -404672 sc-eQTL 2.70e-01 0.118 0.107 0.347 pDC L2
ENSG00000057704 TMCC3 162517 sc-eQTL 2.48e-01 0.12 0.104 0.347 pDC L2
ENSG00000111142 METAP2 -660446 sc-eQTL 3.49e-01 0.102 0.109 0.347 pDC L2
ENSG00000120798 NR2C1 -260554 sc-eQTL 2.98e-02 0.233 0.106 0.347 pDC L2
ENSG00000136040 PLXNC1 664497 sc-eQTL 9.98e-01 -0.000265 0.104 0.347 pDC L2
ENSG00000173588 CEP83 353086 sc-eQTL 1.46e-01 -0.162 0.111 0.347 pDC L2
ENSG00000180263 FGD6 -404408 sc-eQTL 5.12e-01 0.0616 0.0937 0.347 pDC L2
ENSG00000184752 NDUFA12 -190674 sc-eQTL 5.36e-01 0.0574 0.0924 0.347 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -404672 sc-eQTL 3.53e-01 0.0871 0.0937 0.323 B_Memory LOneK1K
ENSG00000057704 TMCC3 162517 sc-eQTL 4.70e-01 0.0716 0.0989 0.323 B_Memory LOneK1K
ENSG00000111142 METAP2 -660446 sc-eQTL 4.04e-01 0.0729 0.0873 0.323 B_Memory LOneK1K
ENSG00000120798 NR2C1 -260554 sc-eQTL 4.76e-02 -0.198 0.0995 0.323 B_Memory LOneK1K
ENSG00000136014 USP44 -738402 sc-eQTL 4.91e-01 0.064 0.0929 0.323 B_Memory LOneK1K
ENSG00000136040 PLXNC1 664497 sc-eQTL 6.62e-01 -0.0262 0.0599 0.323 B_Memory LOneK1K
ENSG00000173588 CEP83 353086 sc-eQTL 2.65e-01 0.0932 0.0834 0.323 B_Memory LOneK1K
ENSG00000180263 FGD6 -404408 sc-eQTL 1.20e-01 0.129 0.0828 0.323 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -190674 sc-eQTL 8.56e-01 -0.0105 0.0575 0.323 B_Memory LOneK1K
ENSG00000028203 VEZT -404672 sc-eQTL 7.21e-01 0.0314 0.088 0.323 B_Naive LOneK1K
ENSG00000057704 TMCC3 162517 sc-eQTL 6.72e-01 0.0378 0.0893 0.323 B_Naive LOneK1K
ENSG00000111142 METAP2 -660446 sc-eQTL 5.94e-02 0.138 0.0729 0.323 B_Naive LOneK1K
ENSG00000120798 NR2C1 -260554 sc-eQTL 8.05e-01 -0.0236 0.0956 0.323 B_Naive LOneK1K
ENSG00000136014 USP44 -738402 sc-eQTL 9.94e-01 0.000626 0.0848 0.323 B_Naive LOneK1K
ENSG00000136040 PLXNC1 664497 sc-eQTL 8.73e-01 -0.0116 0.0725 0.323 B_Naive LOneK1K
ENSG00000173588 CEP83 353086 sc-eQTL 9.95e-01 0.00044 0.0755 0.323 B_Naive LOneK1K
ENSG00000180263 FGD6 -404408 sc-eQTL 5.26e-01 0.0591 0.0931 0.323 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -190674 sc-eQTL 3.63e-01 -0.0468 0.0514 0.323 B_Naive LOneK1K
ENSG00000028203 VEZT -404672 sc-eQTL 4.23e-01 -0.0683 0.085 0.323 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 162517 sc-eQTL 3.43e-02 0.142 0.0668 0.323 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -660446 sc-eQTL 6.06e-01 0.0376 0.0728 0.323 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -260554 sc-eQTL 8.92e-02 0.134 0.0787 0.323 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 664497 sc-eQTL 9.86e-02 -0.0986 0.0594 0.323 CD14_Mono LOneK1K
ENSG00000173588 CEP83 353086 sc-eQTL 7.44e-01 -0.0266 0.0815 0.323 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -404408 sc-eQTL 1.55e-01 0.104 0.0733 0.323 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -190674 sc-eQTL 4.99e-05 0.201 0.0486 0.323 CD14_Mono LOneK1K
ENSG00000028203 VEZT -404672 sc-eQTL 7.26e-01 -0.0337 0.0962 0.325 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 162517 sc-eQTL 6.67e-01 -0.0385 0.0892 0.325 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -660446 sc-eQTL 9.59e-01 -0.00456 0.0881 0.325 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -260554 sc-eQTL 6.67e-01 0.0425 0.0986 0.325 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 664497 sc-eQTL 9.70e-01 0.00212 0.0569 0.325 CD16_Mono LOneK1K
ENSG00000173588 CEP83 353086 sc-eQTL 1.32e-01 -0.142 0.094 0.325 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -404408 sc-eQTL 5.95e-02 0.152 0.0801 0.325 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -190674 sc-eQTL 2.43e-02 0.144 0.0636 0.325 CD16_Mono LOneK1K
ENSG00000028203 VEZT -404672 sc-eQTL 3.61e-01 -0.0804 0.0878 0.323 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 162517 sc-eQTL 8.25e-01 -0.0182 0.0821 0.323 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -660446 sc-eQTL 3.24e-01 0.0693 0.0701 0.323 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -260554 sc-eQTL 7.98e-01 0.0204 0.0796 0.323 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 664497 sc-eQTL 9.95e-01 0.000426 0.0698 0.323 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 353086 sc-eQTL 1.03e-01 0.128 0.0781 0.323 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -190674 sc-eQTL 3.31e-03 0.168 0.0565 0.323 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000028203 VEZT -404672 eQTL 0.04 0.0323 0.0157 0.0 0.0 0.28
ENSG00000111142 METAP2 -660446 pQTL 0.03 -0.0295 0.0136 0.0 0.0 0.286
ENSG00000180263 FGD6 -404408 eQTL 2.34e-06 0.1 0.0211 0.00472 0.00412 0.28
ENSG00000184752 NDUFA12 -190674 eQTL 2.47e-16 0.159 0.0191 0.00479 0.00218 0.28
ENSG00000236349 SUCLG2P2 264833 eQTL 0.0888 0.0423 0.0248 0.001 0.0 0.28

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000074527 \N -978078 2.64e-07 1.11e-07 3.59e-08 1.79e-07 9.02e-08 9.71e-08 1.38e-07 5.33e-08 1.41e-07 4.38e-08 1.6e-07 7.75e-08 1.26e-07 6.21e-08 5.53e-08 7.5e-08 4.63e-08 1.14e-07 5.19e-08 4.03e-08 1.04e-07 1.28e-07 1.26e-07 4.26e-08 1.31e-07 1.19e-07 1.12e-07 8.71e-08 1.02e-07 1.12e-07 9.58e-08 3.98e-08 2.92e-08 8.68e-08 8.93e-08 4.02e-08 4.89e-08 9.49e-08 7.58e-08 3.54e-08 4.51e-08 1.31e-07 4.1e-08 2.88e-08 6.38e-08 1.7e-08 1.26e-07 4.09e-09 5.04e-08
ENSG00000180263 FGD6 -404408 7.57e-07 4e-07 8.02e-08 3.19e-07 1.03e-07 1.57e-07 4.42e-07 7.65e-08 2.56e-07 1.6e-07 3.66e-07 2.33e-07 5.39e-07 1.07e-07 1.26e-07 1.49e-07 1.01e-07 2.93e-07 1.27e-07 8.25e-08 1.48e-07 2.48e-07 3.02e-07 7.94e-08 5.15e-07 2.07e-07 1.87e-07 1.77e-07 2.19e-07 3.39e-07 1.93e-07 8.02e-08 5.17e-08 1.15e-07 2.15e-07 5.23e-08 7.52e-08 5.8e-08 5.62e-08 5.88e-08 3.43e-08 4.35e-07 2.32e-08 1.71e-08 7.89e-08 8.42e-09 9.25e-08 0.0 4.54e-08
ENSG00000184752 NDUFA12 -190674 1.49e-06 1.5e-06 2.74e-07 1.26e-06 3.23e-07 6.12e-07 1.46e-06 3.85e-07 1.5e-06 5.9e-07 1.99e-06 8.67e-07 2.61e-06 3.39e-07 5.4e-07 9.57e-07 9.07e-07 9.1e-07 8.34e-07 6.19e-07 6.66e-07 1.8e-06 1.12e-06 5.66e-07 2.46e-06 6.73e-07 1.03e-06 8.37e-07 1.63e-06 1.27e-06 8.17e-07 1.92e-07 1.89e-07 6.9e-07 5.67e-07 4.4e-07 5.53e-07 1.92e-07 4.58e-07 3.02e-07 2.77e-07 2.12e-06 1.67e-07 8.06e-08 1.79e-07 1.38e-07 2.22e-07 8.87e-08 1.04e-07
ENSG00000236349 SUCLG2P2 264833 1.29e-06 9.07e-07 2.1e-07 4.15e-07 9.93e-08 4.12e-07 1.02e-06 2.7e-07 9.02e-07 2.81e-07 1.24e-06 6.07e-07 1.55e-06 2.61e-07 4.26e-07 5.29e-07 7.47e-07 5.27e-07 4e-07 3.99e-07 2.38e-07 7.21e-07 7.39e-07 3.62e-07 1.86e-06 2.47e-07 6.16e-07 4.75e-07 8.24e-07 1e-06 4.65e-07 4.44e-08 9.89e-08 2.74e-07 3.96e-07 2.42e-07 2.36e-07 1.27e-07 1.48e-07 4.17e-08 1.45e-07 1.54e-06 5.65e-08 1.28e-08 1.87e-07 4.33e-08 1.46e-07 3.09e-08 6.14e-08