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Genes within 1Mb (chr12:94803974:C:CA):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -413772 sc-eQTL 8.00e-01 0.0192 0.0757 0.474 B L1
ENSG00000057704 TMCC3 153417 sc-eQTL 1.22e-01 -0.137 0.0884 0.474 B L1
ENSG00000111142 METAP2 -669546 sc-eQTL 7.00e-01 0.0257 0.0666 0.474 B L1
ENSG00000120798 NR2C1 -269654 sc-eQTL 2.82e-01 -0.0905 0.0839 0.474 B L1
ENSG00000136014 USP44 -747502 sc-eQTL 3.31e-01 0.0747 0.0766 0.474 B L1
ENSG00000136040 PLXNC1 655397 sc-eQTL 8.23e-01 0.0113 0.0504 0.474 B L1
ENSG00000173588 CEP83 343986 sc-eQTL 3.00e-01 -0.0659 0.0635 0.474 B L1
ENSG00000180263 FGD6 -413508 sc-eQTL 4.92e-01 0.0528 0.0768 0.474 B L1
ENSG00000184752 NDUFA12 -199774 sc-eQTL 3.13e-01 -0.037 0.0366 0.474 B L1
ENSG00000028203 VEZT -413772 sc-eQTL 4.11e-01 -0.0505 0.0612 0.474 CD4T L1
ENSG00000111142 METAP2 -669546 sc-eQTL 6.03e-01 -0.0277 0.0532 0.474 CD4T L1
ENSG00000120798 NR2C1 -269654 sc-eQTL 3.42e-01 0.0563 0.0591 0.474 CD4T L1
ENSG00000136014 USP44 -747502 sc-eQTL 2.87e-01 0.0863 0.0807 0.474 CD4T L1
ENSG00000136040 PLXNC1 655397 sc-eQTL 7.34e-01 0.0177 0.0521 0.474 CD4T L1
ENSG00000173588 CEP83 343986 sc-eQTL 3.26e-02 0.116 0.054 0.474 CD4T L1
ENSG00000184752 NDUFA12 -199774 sc-eQTL 2.38e-01 0.0675 0.057 0.474 CD4T L1
ENSG00000028203 VEZT -413772 sc-eQTL 2.97e-01 0.0765 0.0732 0.474 CD8T L1
ENSG00000057704 TMCC3 153417 sc-eQTL 5.43e-01 -0.03 0.0493 0.474 CD8T L1
ENSG00000111142 METAP2 -669546 sc-eQTL 6.53e-01 0.0282 0.0627 0.474 CD8T L1
ENSG00000120798 NR2C1 -269654 sc-eQTL 2.04e-01 -0.101 0.0795 0.474 CD8T L1
ENSG00000136014 USP44 -747502 sc-eQTL 8.38e-01 -0.0146 0.0715 0.474 CD8T L1
ENSG00000136040 PLXNC1 655397 sc-eQTL 5.25e-02 0.131 0.0673 0.474 CD8T L1
ENSG00000173588 CEP83 343986 sc-eQTL 6.99e-01 0.0246 0.0634 0.474 CD8T L1
ENSG00000184752 NDUFA12 -199774 sc-eQTL 5.02e-01 0.0349 0.0519 0.474 CD8T L1
ENSG00000028203 VEZT -413772 sc-eQTL 7.84e-01 -0.0234 0.0852 0.48 DC L1
ENSG00000057704 TMCC3 153417 sc-eQTL 5.41e-01 0.0552 0.0902 0.48 DC L1
ENSG00000111142 METAP2 -669546 sc-eQTL 8.54e-02 0.153 0.0888 0.48 DC L1
ENSG00000120798 NR2C1 -269654 sc-eQTL 8.00e-01 0.022 0.0866 0.48 DC L1
ENSG00000136040 PLXNC1 655397 sc-eQTL 1.00e+00 3.22e-05 0.0808 0.48 DC L1
ENSG00000173588 CEP83 343986 sc-eQTL 5.37e-01 -0.0445 0.0719 0.48 DC L1
ENSG00000180263 FGD6 -413508 sc-eQTL 2.95e-01 -0.0839 0.0799 0.48 DC L1
ENSG00000184752 NDUFA12 -199774 sc-eQTL 5.52e-01 0.0402 0.0674 0.48 DC L1
ENSG00000028203 VEZT -413772 sc-eQTL 6.58e-01 -0.0349 0.0789 0.474 Mono L1
ENSG00000057704 TMCC3 153417 sc-eQTL 6.96e-02 0.111 0.0609 0.474 Mono L1
ENSG00000111142 METAP2 -669546 sc-eQTL 9.97e-01 -0.000267 0.0628 0.474 Mono L1
ENSG00000120798 NR2C1 -269654 sc-eQTL 6.93e-01 0.0296 0.0749 0.474 Mono L1
ENSG00000136040 PLXNC1 655397 sc-eQTL 4.37e-02 -0.102 0.0504 0.474 Mono L1
ENSG00000173588 CEP83 343986 sc-eQTL 8.06e-01 -0.0185 0.0752 0.474 Mono L1
ENSG00000180263 FGD6 -413508 sc-eQTL 6.75e-01 0.0281 0.0669 0.474 Mono L1
ENSG00000184752 NDUFA12 -199774 sc-eQTL 4.56e-01 0.0359 0.048 0.474 Mono L1
ENSG00000028203 VEZT -413772 sc-eQTL 5.43e-01 -0.0495 0.0813 0.476 NK L1
ENSG00000057704 TMCC3 153417 sc-eQTL 9.13e-01 0.0084 0.0767 0.476 NK L1
ENSG00000111142 METAP2 -669546 sc-eQTL 4.43e-02 0.129 0.0638 0.476 NK L1
ENSG00000120798 NR2C1 -269654 sc-eQTL 3.19e-01 -0.0759 0.076 0.476 NK L1
ENSG00000136040 PLXNC1 655397 sc-eQTL 2.62e-01 -0.0704 0.0626 0.476 NK L1
ENSG00000173588 CEP83 343986 sc-eQTL 9.41e-01 0.00525 0.0714 0.476 NK L1
ENSG00000184752 NDUFA12 -199774 sc-eQTL 2.85e-01 0.0563 0.0525 0.476 NK L1
ENSG00000028203 VEZT -413772 sc-eQTL 1.11e-03 -0.285 0.0862 0.474 Other_T L1
ENSG00000057704 TMCC3 153417 sc-eQTL 1.83e-01 -0.1 0.075 0.474 Other_T L1
ENSG00000074527 NTN4 -987178 sc-eQTL 8.71e-01 0.0108 0.0666 0.474 Other_T L1
ENSG00000111142 METAP2 -669546 sc-eQTL 4.53e-01 0.0517 0.0687 0.474 Other_T L1
ENSG00000120798 NR2C1 -269654 sc-eQTL 4.06e-01 0.0713 0.0857 0.474 Other_T L1
ENSG00000136040 PLXNC1 655397 sc-eQTL 1.97e-01 0.0898 0.0694 0.474 Other_T L1
ENSG00000173588 CEP83 343986 sc-eQTL 4.97e-01 -0.0532 0.0783 0.474 Other_T L1
ENSG00000184752 NDUFA12 -199774 sc-eQTL 7.78e-01 -0.0123 0.0436 0.474 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -413772 sc-eQTL 4.29e-01 -0.082 0.104 0.482 B_Activated L2
ENSG00000057704 TMCC3 153417 sc-eQTL 3.68e-02 -0.184 0.0874 0.482 B_Activated L2
ENSG00000111142 METAP2 -669546 sc-eQTL 8.07e-01 -0.0265 0.108 0.482 B_Activated L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 8.27e-01 0.0227 0.104 0.482 B_Activated L2
ENSG00000136014 USP44 -747502 sc-eQTL 9.82e-01 -0.00178 0.0792 0.482 B_Activated L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 6.31e-01 -0.0402 0.0836 0.482 B_Activated L2
ENSG00000173588 CEP83 343986 sc-eQTL 3.43e-01 0.0988 0.104 0.482 B_Activated L2
ENSG00000180263 FGD6 -413508 sc-eQTL 2.61e-01 0.0823 0.0731 0.482 B_Activated L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 1.03e-01 -0.149 0.091 0.482 B_Activated L2
ENSG00000028203 VEZT -413772 sc-eQTL 9.28e-01 0.00797 0.0886 0.472 B_Intermediate L2
ENSG00000057704 TMCC3 153417 sc-eQTL 3.85e-01 0.0779 0.0895 0.472 B_Intermediate L2
ENSG00000111142 METAP2 -669546 sc-eQTL 4.76e-01 -0.0583 0.0817 0.472 B_Intermediate L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 3.90e-01 -0.077 0.0895 0.472 B_Intermediate L2
ENSG00000136014 USP44 -747502 sc-eQTL 3.86e-01 0.0797 0.0917 0.472 B_Intermediate L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 5.40e-01 -0.0463 0.0754 0.472 B_Intermediate L2
ENSG00000173588 CEP83 343986 sc-eQTL 8.59e-01 -0.0149 0.0836 0.472 B_Intermediate L2
ENSG00000180263 FGD6 -413508 sc-eQTL 9.45e-01 -0.00562 0.0821 0.472 B_Intermediate L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 1.33e-01 -0.102 0.0675 0.472 B_Intermediate L2
ENSG00000028203 VEZT -413772 sc-eQTL 3.30e-01 -0.0908 0.093 0.476 B_Memory L2
ENSG00000057704 TMCC3 153417 sc-eQTL 1.75e-01 -0.128 0.0942 0.476 B_Memory L2
ENSG00000111142 METAP2 -669546 sc-eQTL 4.84e-01 0.0634 0.0903 0.476 B_Memory L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 1.92e-01 -0.127 0.0969 0.476 B_Memory L2
ENSG00000136014 USP44 -747502 sc-eQTL 1.99e-01 0.111 0.0863 0.476 B_Memory L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 2.32e-01 0.0875 0.073 0.476 B_Memory L2
ENSG00000173588 CEP83 343986 sc-eQTL 1.82e-01 0.114 0.0851 0.476 B_Memory L2
ENSG00000180263 FGD6 -413508 sc-eQTL 2.42e-01 0.101 0.0859 0.476 B_Memory L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 7.90e-01 -0.0185 0.0693 0.476 B_Memory L2
ENSG00000028203 VEZT -413772 sc-eQTL 7.43e-01 -0.0296 0.09 0.474 B_Naive1 L2
ENSG00000057704 TMCC3 153417 sc-eQTL 5.95e-02 -0.171 0.0903 0.474 B_Naive1 L2
ENSG00000111142 METAP2 -669546 sc-eQTL 1.01e-01 0.125 0.0761 0.474 B_Naive1 L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 5.30e-01 0.0587 0.0933 0.474 B_Naive1 L2
ENSG00000136014 USP44 -747502 sc-eQTL 5.29e-01 -0.0581 0.092 0.474 B_Naive1 L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 8.38e-01 0.0158 0.0773 0.474 B_Naive1 L2
ENSG00000173588 CEP83 343986 sc-eQTL 5.93e-01 -0.0428 0.0798 0.474 B_Naive1 L2
ENSG00000180263 FGD6 -413508 sc-eQTL 7.73e-01 -0.0253 0.0875 0.474 B_Naive1 L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 8.30e-01 -0.0109 0.051 0.474 B_Naive1 L2
ENSG00000028203 VEZT -413772 sc-eQTL 6.18e-01 -0.0472 0.0947 0.476 B_Naive2 L2
ENSG00000057704 TMCC3 153417 sc-eQTL 2.40e-01 0.102 0.0863 0.476 B_Naive2 L2
ENSG00000111142 METAP2 -669546 sc-eQTL 6.11e-01 -0.0445 0.0875 0.476 B_Naive2 L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 2.41e-01 -0.112 0.0955 0.476 B_Naive2 L2
ENSG00000136014 USP44 -747502 sc-eQTL 8.40e-01 0.0177 0.0875 0.476 B_Naive2 L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 9.92e-01 0.000781 0.081 0.476 B_Naive2 L2
ENSG00000173588 CEP83 343986 sc-eQTL 8.64e-01 0.0147 0.0855 0.476 B_Naive2 L2
ENSG00000180263 FGD6 -413508 sc-eQTL 2.02e-01 0.0914 0.0714 0.476 B_Naive2 L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 8.86e-01 0.0101 0.0705 0.476 B_Naive2 L2
ENSG00000028203 VEZT -413772 sc-eQTL 8.04e-01 0.0231 0.0933 0.48 CD4_CTL L2
ENSG00000111142 METAP2 -669546 sc-eQTL 3.33e-01 -0.0943 0.0973 0.48 CD4_CTL L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 6.02e-02 0.183 0.0971 0.48 CD4_CTL L2
ENSG00000136014 USP44 -747502 sc-eQTL 6.50e-01 0.0353 0.0776 0.48 CD4_CTL L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 8.22e-01 0.0196 0.0872 0.48 CD4_CTL L2
ENSG00000173588 CEP83 343986 sc-eQTL 8.98e-01 0.0114 0.0892 0.48 CD4_CTL L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 9.32e-01 0.0069 0.0803 0.48 CD4_CTL L2
ENSG00000028203 VEZT -413772 sc-eQTL 7.63e-01 0.021 0.0696 0.474 CD4_Naive L2
ENSG00000111142 METAP2 -669546 sc-eQTL 7.00e-01 0.0232 0.0602 0.474 CD4_Naive L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 7.36e-01 0.0248 0.0735 0.474 CD4_Naive L2
ENSG00000136014 USP44 -747502 sc-eQTL 5.53e-01 0.0503 0.0847 0.474 CD4_Naive L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 8.07e-01 0.0141 0.0577 0.474 CD4_Naive L2
ENSG00000173588 CEP83 343986 sc-eQTL 5.85e-01 0.0341 0.0624 0.474 CD4_Naive L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 3.87e-01 0.0464 0.0535 0.474 CD4_Naive L2
ENSG00000028203 VEZT -413772 sc-eQTL 7.99e-02 -0.13 0.0737 0.474 CD4_TCM L2
ENSG00000111142 METAP2 -669546 sc-eQTL 3.08e-01 -0.0709 0.0694 0.474 CD4_TCM L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 8.66e-01 0.0137 0.081 0.474 CD4_TCM L2
ENSG00000136014 USP44 -747502 sc-eQTL 1.29e-01 0.143 0.0938 0.474 CD4_TCM L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 3.00e-01 0.0719 0.0692 0.474 CD4_TCM L2
ENSG00000173588 CEP83 343986 sc-eQTL 1.13e-01 0.117 0.0735 0.474 CD4_TCM L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 1.98e-01 0.082 0.0634 0.474 CD4_TCM L2
ENSG00000028203 VEZT -413772 sc-eQTL 5.11e-01 0.0615 0.0935 0.474 CD4_TEM L2
ENSG00000111142 METAP2 -669546 sc-eQTL 8.83e-01 -0.0122 0.0829 0.474 CD4_TEM L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 1.69e-01 0.12 0.0867 0.474 CD4_TEM L2
ENSG00000136014 USP44 -747502 sc-eQTL 4.39e-01 0.0677 0.0874 0.474 CD4_TEM L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 2.44e-01 0.087 0.0745 0.474 CD4_TEM L2
ENSG00000173588 CEP83 343986 sc-eQTL 3.54e-01 0.0778 0.0838 0.474 CD4_TEM L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 3.03e-01 0.0781 0.0757 0.474 CD4_TEM L2
ENSG00000028203 VEZT -413772 sc-eQTL 6.81e-01 0.0345 0.0838 0.474 CD8_CTL L2
ENSG00000057704 TMCC3 153417 sc-eQTL 4.59e-01 0.0548 0.0738 0.474 CD8_CTL L2
ENSG00000111142 METAP2 -669546 sc-eQTL 2.40e-01 -0.0985 0.0836 0.474 CD8_CTL L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 1.20e-01 -0.144 0.0923 0.474 CD8_CTL L2
ENSG00000136014 USP44 -747502 sc-eQTL 3.13e-01 -0.0897 0.0887 0.474 CD8_CTL L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 4.01e-03 0.216 0.0744 0.474 CD8_CTL L2
ENSG00000173588 CEP83 343986 sc-eQTL 5.33e-01 0.0521 0.0835 0.474 CD8_CTL L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 7.42e-01 0.0217 0.0657 0.474 CD8_CTL L2
ENSG00000028203 VEZT -413772 sc-eQTL 3.39e-01 -0.0806 0.0841 0.474 CD8_Naive L2
ENSG00000057704 TMCC3 153417 sc-eQTL 1.92e-01 0.0859 0.0656 0.474 CD8_Naive L2
ENSG00000111142 METAP2 -669546 sc-eQTL 2.11e-01 0.0954 0.076 0.474 CD8_Naive L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 5.15e-01 -0.0551 0.0845 0.474 CD8_Naive L2
ENSG00000136014 USP44 -747502 sc-eQTL 5.41e-01 0.0467 0.0763 0.474 CD8_Naive L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 8.09e-01 0.0187 0.0773 0.474 CD8_Naive L2
ENSG00000173588 CEP83 343986 sc-eQTL 8.38e-01 -0.0153 0.0745 0.474 CD8_Naive L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 9.34e-01 0.00511 0.0617 0.474 CD8_Naive L2
ENSG00000028203 VEZT -413772 sc-eQTL 9.82e-01 -0.00205 0.0927 0.472 CD8_TCM L2
ENSG00000057704 TMCC3 153417 sc-eQTL 1.51e-01 0.103 0.0711 0.472 CD8_TCM L2
ENSG00000111142 METAP2 -669546 sc-eQTL 6.95e-02 0.17 0.0932 0.472 CD8_TCM L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 2.88e-01 -0.1 0.0943 0.472 CD8_TCM L2
ENSG00000136014 USP44 -747502 sc-eQTL 5.87e-01 0.0461 0.0848 0.472 CD8_TCM L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 7.94e-01 0.0235 0.0895 0.472 CD8_TCM L2
ENSG00000173588 CEP83 343986 sc-eQTL 1.96e-01 0.119 0.0915 0.472 CD8_TCM L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 3.40e-01 -0.0705 0.0738 0.472 CD8_TCM L2
ENSG00000028203 VEZT -413772 sc-eQTL 3.63e-01 0.0847 0.0928 0.47 CD8_TEM L2
ENSG00000057704 TMCC3 153417 sc-eQTL 6.24e-01 -0.0392 0.0799 0.47 CD8_TEM L2
ENSG00000111142 METAP2 -669546 sc-eQTL 3.45e-01 0.0853 0.0901 0.47 CD8_TEM L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 7.59e-01 -0.0291 0.0949 0.47 CD8_TEM L2
ENSG00000136014 USP44 -747502 sc-eQTL 3.53e-01 0.0732 0.0786 0.47 CD8_TEM L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 7.70e-01 -0.0263 0.0897 0.47 CD8_TEM L2
ENSG00000173588 CEP83 343986 sc-eQTL 6.48e-01 -0.0423 0.0925 0.47 CD8_TEM L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 9.79e-01 -0.00205 0.0791 0.47 CD8_TEM L2
ENSG00000028203 VEZT -413772 sc-eQTL 3.70e-02 -0.191 0.0907 0.476 MAIT L2
ENSG00000057704 TMCC3 153417 sc-eQTL 1.38e-01 -0.115 0.0772 0.476 MAIT L2
ENSG00000074527 NTN4 -987178 sc-eQTL 5.44e-01 0.043 0.0708 0.476 MAIT L2
ENSG00000111142 METAP2 -669546 sc-eQTL 1.16e-01 0.14 0.0887 0.476 MAIT L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 9.32e-01 0.00742 0.0865 0.476 MAIT L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 7.01e-01 0.0292 0.076 0.476 MAIT L2
ENSG00000173588 CEP83 343986 sc-eQTL 1.27e-01 -0.133 0.0866 0.476 MAIT L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 9.82e-01 -0.0017 0.0762 0.476 MAIT L2
ENSG00000028203 VEZT -413772 sc-eQTL 4.59e-01 -0.0708 0.0954 0.478 NK_CD56bright L2
ENSG00000057704 TMCC3 153417 sc-eQTL 7.06e-01 -0.0346 0.0915 0.478 NK_CD56bright L2
ENSG00000111142 METAP2 -669546 sc-eQTL 4.40e-01 0.0726 0.0939 0.478 NK_CD56bright L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 6.75e-01 -0.0414 0.0988 0.478 NK_CD56bright L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 8.08e-02 -0.141 0.0803 0.478 NK_CD56bright L2
ENSG00000173588 CEP83 343986 sc-eQTL 1.14e-01 -0.129 0.0814 0.478 NK_CD56bright L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 8.73e-01 0.0126 0.0785 0.478 NK_CD56bright L2
ENSG00000028203 VEZT -413772 sc-eQTL 9.31e-02 -0.152 0.0901 0.476 NK_CD56dim L2
ENSG00000057704 TMCC3 153417 sc-eQTL 3.97e-01 0.067 0.0789 0.476 NK_CD56dim L2
ENSG00000111142 METAP2 -669546 sc-eQTL 3.59e-02 0.171 0.081 0.476 NK_CD56dim L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 4.43e-01 0.064 0.0833 0.476 NK_CD56dim L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 8.87e-01 0.0105 0.0733 0.476 NK_CD56dim L2
ENSG00000173588 CEP83 343986 sc-eQTL 2.87e-01 0.0902 0.0845 0.476 NK_CD56dim L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 2.61e-01 0.0664 0.0589 0.476 NK_CD56dim L2
ENSG00000028203 VEZT -413772 sc-eQTL 4.89e-01 0.0696 0.1 0.473 NK_HLA L2
ENSG00000057704 TMCC3 153417 sc-eQTL 4.68e-01 0.0648 0.089 0.473 NK_HLA L2
ENSG00000111142 METAP2 -669546 sc-eQTL 9.99e-02 0.154 0.0931 0.473 NK_HLA L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 7.35e-01 -0.0335 0.0988 0.473 NK_HLA L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 6.85e-01 0.0328 0.0807 0.473 NK_HLA L2
ENSG00000173588 CEP83 343986 sc-eQTL 1.51e-01 -0.133 0.0922 0.473 NK_HLA L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 5.96e-01 0.0443 0.0834 0.473 NK_HLA L2
ENSG00000028203 VEZT -413772 sc-eQTL 7.29e-01 0.0293 0.0844 0.476 NK_cytokine L2
ENSG00000057704 TMCC3 153417 sc-eQTL 6.73e-01 -0.0366 0.0865 0.476 NK_cytokine L2
ENSG00000111142 METAP2 -669546 sc-eQTL 9.94e-01 0.000694 0.0857 0.476 NK_cytokine L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 1.39e-01 -0.131 0.0882 0.476 NK_cytokine L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 3.90e-01 -0.0659 0.0766 0.476 NK_cytokine L2
ENSG00000173588 CEP83 343986 sc-eQTL 9.05e-01 0.0105 0.0881 0.476 NK_cytokine L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 9.96e-01 0.000333 0.0615 0.476 NK_cytokine L2
ENSG00000028203 VEZT -413772 sc-eQTL 9.22e-01 -0.0105 0.106 0.463 PB L2
ENSG00000057704 TMCC3 153417 sc-eQTL 1.81e-01 -0.128 0.0951 0.463 PB L2
ENSG00000111142 METAP2 -669546 sc-eQTL 9.05e-01 -0.0127 0.106 0.463 PB L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 2.86e-01 -0.108 0.1 0.463 PB L2
ENSG00000136014 USP44 -747502 sc-eQTL 8.27e-01 0.0209 0.0951 0.463 PB L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 6.76e-01 -0.0412 0.0981 0.463 PB L2
ENSG00000173588 CEP83 343986 sc-eQTL 7.98e-01 0.0262 0.102 0.463 PB L2
ENSG00000180263 FGD6 -413508 sc-eQTL 6.20e-01 0.0421 0.0848 0.463 PB L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 9.28e-01 -0.00541 0.0597 0.463 PB L2
ENSG00000028203 VEZT -413772 sc-eQTL 3.73e-02 -0.181 0.0866 0.474 Pro_T L2
ENSG00000057704 TMCC3 153417 sc-eQTL 5.39e-01 -0.048 0.0779 0.474 Pro_T L2
ENSG00000074527 NTN4 -987178 sc-eQTL 7.96e-01 -0.0165 0.0636 0.474 Pro_T L2
ENSG00000111142 METAP2 -669546 sc-eQTL 9.24e-01 0.00713 0.0751 0.474 Pro_T L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 2.75e-01 0.0988 0.0903 0.474 Pro_T L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 5.45e-01 0.0537 0.0886 0.474 Pro_T L2
ENSG00000173588 CEP83 343986 sc-eQTL 5.81e-01 -0.0485 0.0877 0.474 Pro_T L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 7.33e-02 -0.0979 0.0544 0.474 Pro_T L2
ENSG00000028203 VEZT -413772 sc-eQTL 8.32e-01 -0.0191 0.0901 0.474 Treg L2
ENSG00000111142 METAP2 -669546 sc-eQTL 1.59e-01 0.12 0.0846 0.474 Treg L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 3.94e-01 0.0766 0.0898 0.474 Treg L2
ENSG00000136014 USP44 -747502 sc-eQTL 5.23e-01 0.0514 0.0804 0.474 Treg L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 5.10e-01 -0.0547 0.0829 0.474 Treg L2
ENSG00000173588 CEP83 343986 sc-eQTL 1.75e-01 0.12 0.0884 0.474 Treg L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 7.52e-01 -0.0215 0.0681 0.474 Treg L2
ENSG00000028203 VEZT -413772 sc-eQTL 4.97e-01 -0.0595 0.0874 0.478 cDC L2
ENSG00000057704 TMCC3 153417 sc-eQTL 5.17e-01 0.0612 0.0942 0.478 cDC L2
ENSG00000111142 METAP2 -669546 sc-eQTL 2.45e-03 0.287 0.0935 0.478 cDC L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 7.57e-01 0.0286 0.0923 0.478 cDC L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 7.17e-01 0.0299 0.0823 0.478 cDC L2
ENSG00000173588 CEP83 343986 sc-eQTL 8.71e-01 -0.0126 0.0772 0.478 cDC L2
ENSG00000180263 FGD6 -413508 sc-eQTL 1.17e-01 -0.139 0.0881 0.478 cDC L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 3.83e-01 0.0659 0.0753 0.478 cDC L2
ENSG00000028203 VEZT -413772 sc-eQTL 6.53e-01 -0.0392 0.0871 0.474 cMono_IL1B L2
ENSG00000057704 TMCC3 153417 sc-eQTL 1.42e-02 0.167 0.0675 0.474 cMono_IL1B L2
ENSG00000111142 METAP2 -669546 sc-eQTL 1.49e-01 0.108 0.0749 0.474 cMono_IL1B L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 3.27e-01 0.0777 0.0791 0.474 cMono_IL1B L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 4.24e-01 -0.0484 0.0603 0.474 cMono_IL1B L2
ENSG00000173588 CEP83 343986 sc-eQTL 7.98e-01 0.021 0.0823 0.474 cMono_IL1B L2
ENSG00000180263 FGD6 -413508 sc-eQTL 5.62e-01 0.0408 0.0702 0.474 cMono_IL1B L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 8.29e-01 0.0108 0.0499 0.474 cMono_IL1B L2
ENSG00000028203 VEZT -413772 sc-eQTL 9.47e-01 -0.00583 0.0883 0.474 cMono_S100A L2
ENSG00000057704 TMCC3 153417 sc-eQTL 2.66e-01 0.086 0.0771 0.474 cMono_S100A L2
ENSG00000111142 METAP2 -669546 sc-eQTL 9.96e-01 0.000376 0.0853 0.474 cMono_S100A L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 8.47e-01 0.0162 0.0841 0.474 cMono_S100A L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 2.80e-03 -0.187 0.0617 0.474 cMono_S100A L2
ENSG00000173588 CEP83 343986 sc-eQTL 4.67e-01 0.0648 0.089 0.474 cMono_S100A L2
ENSG00000180263 FGD6 -413508 sc-eQTL 6.19e-01 -0.0406 0.0816 0.474 cMono_S100A L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 7.46e-02 0.103 0.0576 0.474 cMono_S100A L2
ENSG00000028203 VEZT -413772 sc-eQTL 3.10e-01 -0.113 0.111 0.464 gdT L2
ENSG00000057704 TMCC3 153417 sc-eQTL 8.93e-01 0.0114 0.0851 0.464 gdT L2
ENSG00000074527 NTN4 -987178 sc-eQTL 1.34e-01 0.126 0.0838 0.464 gdT L2
ENSG00000111142 METAP2 -669546 sc-eQTL 5.96e-01 -0.056 0.106 0.464 gdT L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 5.26e-02 0.218 0.111 0.464 gdT L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 3.26e-01 0.105 0.107 0.464 gdT L2
ENSG00000173588 CEP83 343986 sc-eQTL 9.61e-01 -0.00518 0.105 0.464 gdT L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 8.67e-01 -0.0153 0.0911 0.464 gdT L2
ENSG00000028203 VEZT -413772 sc-eQTL 9.89e-01 -0.00127 0.0943 0.478 intMono L2
ENSG00000057704 TMCC3 153417 sc-eQTL 5.87e-01 -0.0498 0.0914 0.478 intMono L2
ENSG00000111142 METAP2 -669546 sc-eQTL 4.66e-01 -0.07 0.0959 0.478 intMono L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 7.56e-01 -0.0279 0.0896 0.478 intMono L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 2.44e-01 -0.0899 0.0769 0.478 intMono L2
ENSG00000173588 CEP83 343986 sc-eQTL 1.23e-01 -0.143 0.0924 0.478 intMono L2
ENSG00000180263 FGD6 -413508 sc-eQTL 9.99e-01 -9.87e-05 0.0834 0.478 intMono L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 7.18e-01 0.0216 0.0595 0.478 intMono L2
ENSG00000028203 VEZT -413772 sc-eQTL 2.19e-01 0.111 0.0899 0.48 ncMono L2
ENSG00000057704 TMCC3 153417 sc-eQTL 7.95e-01 0.0227 0.0871 0.48 ncMono L2
ENSG00000111142 METAP2 -669546 sc-eQTL 9.34e-01 0.00792 0.0948 0.48 ncMono L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 8.36e-01 0.0195 0.0941 0.48 ncMono L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 5.48e-01 -0.036 0.0599 0.48 ncMono L2
ENSG00000173588 CEP83 343986 sc-eQTL 8.84e-01 -0.0137 0.0938 0.48 ncMono L2
ENSG00000180263 FGD6 -413508 sc-eQTL 8.46e-01 0.0174 0.0891 0.48 ncMono L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 9.75e-01 -0.00252 0.0792 0.48 ncMono L2
ENSG00000028203 VEZT -413772 sc-eQTL 6.85e-01 0.0401 0.0986 0.494 pDC L2
ENSG00000057704 TMCC3 153417 sc-eQTL 8.43e-01 0.0191 0.0961 0.494 pDC L2
ENSG00000111142 METAP2 -669546 sc-eQTL 4.87e-01 0.07 0.101 0.494 pDC L2
ENSG00000120798 NR2C1 -269654 sc-eQTL 1.14e-01 0.157 0.0987 0.494 pDC L2
ENSG00000136040 PLXNC1 655397 sc-eQTL 3.45e-01 0.0904 0.0954 0.494 pDC L2
ENSG00000173588 CEP83 343986 sc-eQTL 1.74e-01 -0.14 0.102 0.494 pDC L2
ENSG00000180263 FGD6 -413508 sc-eQTL 5.20e-01 0.0558 0.0864 0.494 pDC L2
ENSG00000184752 NDUFA12 -199774 sc-eQTL 7.26e-01 0.0299 0.0853 0.494 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -413772 sc-eQTL 6.14e-01 -0.0453 0.0895 0.474 B_Memory LOneK1K
ENSG00000057704 TMCC3 153417 sc-eQTL 9.55e-01 -0.00534 0.0946 0.474 B_Memory LOneK1K
ENSG00000111142 METAP2 -669546 sc-eQTL 6.52e-01 0.0377 0.0834 0.474 B_Memory LOneK1K
ENSG00000120798 NR2C1 -269654 sc-eQTL 3.49e-01 -0.0899 0.0957 0.474 B_Memory LOneK1K
ENSG00000136014 USP44 -747502 sc-eQTL 4.22e-01 0.0713 0.0886 0.474 B_Memory LOneK1K
ENSG00000136040 PLXNC1 655397 sc-eQTL 6.28e-01 -0.0278 0.0572 0.474 B_Memory LOneK1K
ENSG00000173588 CEP83 343986 sc-eQTL 3.71e-01 0.0714 0.0797 0.474 B_Memory LOneK1K
ENSG00000180263 FGD6 -413508 sc-eQTL 5.01e-01 0.0535 0.0794 0.474 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -199774 sc-eQTL 1.85e-01 -0.0727 0.0546 0.474 B_Memory LOneK1K
ENSG00000028203 VEZT -413772 sc-eQTL 9.30e-01 -0.0075 0.0857 0.474 B_Naive LOneK1K
ENSG00000057704 TMCC3 153417 sc-eQTL 2.98e-01 -0.0905 0.0867 0.474 B_Naive LOneK1K
ENSG00000111142 METAP2 -669546 sc-eQTL 3.65e-01 0.0648 0.0714 0.474 B_Naive LOneK1K
ENSG00000120798 NR2C1 -269654 sc-eQTL 6.18e-01 -0.0465 0.093 0.474 B_Naive LOneK1K
ENSG00000136014 USP44 -747502 sc-eQTL 7.65e-01 0.0248 0.0825 0.474 B_Naive LOneK1K
ENSG00000136040 PLXNC1 655397 sc-eQTL 9.26e-01 0.00654 0.0705 0.474 B_Naive LOneK1K
ENSG00000173588 CEP83 343986 sc-eQTL 5.94e-01 -0.0393 0.0735 0.474 B_Naive LOneK1K
ENSG00000180263 FGD6 -413508 sc-eQTL 5.24e-01 0.0578 0.0906 0.474 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -199774 sc-eQTL 6.04e-01 -0.026 0.0501 0.474 B_Naive LOneK1K
ENSG00000028203 VEZT -413772 sc-eQTL 5.14e-01 -0.0524 0.0801 0.474 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 153417 sc-eQTL 1.41e-02 0.155 0.0627 0.474 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -669546 sc-eQTL 4.35e-01 0.0536 0.0685 0.474 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -269654 sc-eQTL 3.31e-01 0.0726 0.0745 0.474 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 655397 sc-eQTL 4.95e-02 -0.11 0.0558 0.474 CD14_Mono LOneK1K
ENSG00000173588 CEP83 343986 sc-eQTL 9.77e-01 -0.00222 0.0768 0.474 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -413508 sc-eQTL 7.84e-01 0.019 0.0693 0.474 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -199774 sc-eQTL 4.38e-01 0.0369 0.0475 0.474 CD14_Mono LOneK1K
ENSG00000028203 VEZT -413772 sc-eQTL 6.00e-01 0.0475 0.0904 0.476 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 153417 sc-eQTL 7.44e-01 -0.0274 0.0839 0.476 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -669546 sc-eQTL 5.65e-01 -0.0477 0.0828 0.476 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -269654 sc-eQTL 4.35e-01 -0.0725 0.0927 0.476 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 655397 sc-eQTL 2.36e-01 -0.0635 0.0534 0.476 CD16_Mono LOneK1K
ENSG00000173588 CEP83 343986 sc-eQTL 2.05e-01 -0.113 0.0886 0.476 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -413508 sc-eQTL 4.08e-01 0.0628 0.0758 0.476 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -199774 sc-eQTL 9.20e-01 -0.0061 0.0606 0.476 CD16_Mono LOneK1K
ENSG00000028203 VEZT -413772 sc-eQTL 4.59e-01 -0.0622 0.0839 0.476 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 153417 sc-eQTL 7.27e-01 0.0275 0.0784 0.476 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -669546 sc-eQTL 5.08e-02 0.131 0.0665 0.476 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -269654 sc-eQTL 6.60e-01 -0.0335 0.0761 0.476 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 655397 sc-eQTL 6.62e-01 -0.0292 0.0667 0.476 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 343986 sc-eQTL 3.23e-01 0.0741 0.0749 0.476 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -199774 sc-eQTL 3.79e-01 0.0485 0.055 0.476 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000184752 \N -199774 2.13e-06 1.19e-06 6.71e-07 1.14e-06 1.07e-07 6.17e-07 1.54e-06 6.72e-08 1.32e-06 2.26e-07 2.03e-06 4.24e-07 2.34e-06 2.81e-07 4.26e-07 5.7e-07 8.4e-07 5.57e-07 3.06e-07 2.76e-07 2.97e-07 1.28e-06 9.11e-07 2.7e-07 2.19e-06 2.4e-07 4.55e-07 4.94e-07 9.73e-07 1.29e-06 4.39e-07 3.94e-08 4.28e-08 1.23e-06 5.93e-07 6.85e-08 1.42e-07 5.71e-08 5.69e-08 5.96e-08 9.7e-08 2.09e-06 5.53e-08 7.47e-09 4e-08 7.29e-08 7.89e-08 1.88e-09 4.94e-08