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Genes within 1Mb (chr12:94777189:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -440557 sc-eQTL 1.72e-01 -0.167 0.122 0.897 B L1
ENSG00000057704 TMCC3 126632 sc-eQTL 4.92e-01 -0.099 0.144 0.897 B L1
ENSG00000111142 METAP2 -696331 sc-eQTL 7.55e-01 0.0336 0.108 0.897 B L1
ENSG00000120798 NR2C1 -296439 sc-eQTL 3.37e-01 -0.131 0.136 0.897 B L1
ENSG00000136014 USP44 -774287 sc-eQTL 4.03e-01 0.104 0.124 0.897 B L1
ENSG00000136040 PLXNC1 628612 sc-eQTL 1.82e-01 -0.109 0.0813 0.897 B L1
ENSG00000173588 CEP83 317201 sc-eQTL 1.96e-01 -0.133 0.103 0.897 B L1
ENSG00000180263 FGD6 -440293 sc-eQTL 9.44e-01 -0.00869 0.125 0.897 B L1
ENSG00000184752 NDUFA12 -226559 sc-eQTL 8.69e-01 -0.0098 0.0594 0.897 B L1
ENSG00000028203 VEZT -440557 sc-eQTL 9.33e-01 0.00858 0.102 0.897 CD4T L1
ENSG00000111142 METAP2 -696331 sc-eQTL 9.41e-01 -0.00653 0.0881 0.897 CD4T L1
ENSG00000120798 NR2C1 -296439 sc-eQTL 8.06e-02 0.171 0.0974 0.897 CD4T L1
ENSG00000136014 USP44 -774287 sc-eQTL 7.20e-01 0.048 0.134 0.897 CD4T L1
ENSG00000136040 PLXNC1 628612 sc-eQTL 8.52e-01 -0.0161 0.0862 0.897 CD4T L1
ENSG00000173588 CEP83 317201 sc-eQTL 7.42e-01 -0.0298 0.0903 0.897 CD4T L1
ENSG00000184752 NDUFA12 -226559 sc-eQTL 1.14e-01 0.149 0.0942 0.897 CD4T L1
ENSG00000028203 VEZT -440557 sc-eQTL 8.98e-01 -0.0155 0.121 0.897 CD8T L1
ENSG00000057704 TMCC3 126632 sc-eQTL 3.16e-01 0.0814 0.0811 0.897 CD8T L1
ENSG00000111142 METAP2 -696331 sc-eQTL 5.38e-01 0.0637 0.103 0.897 CD8T L1
ENSG00000120798 NR2C1 -296439 sc-eQTL 5.04e-01 -0.0879 0.131 0.897 CD8T L1
ENSG00000136014 USP44 -774287 sc-eQTL 9.12e-01 -0.013 0.118 0.897 CD8T L1
ENSG00000136040 PLXNC1 628612 sc-eQTL 4.22e-01 0.0899 0.112 0.897 CD8T L1
ENSG00000173588 CEP83 317201 sc-eQTL 4.81e-01 -0.0737 0.104 0.897 CD8T L1
ENSG00000184752 NDUFA12 -226559 sc-eQTL 5.38e-02 0.164 0.0848 0.897 CD8T L1
ENSG00000028203 VEZT -440557 sc-eQTL 4.30e-01 0.112 0.141 0.894 DC L1
ENSG00000057704 TMCC3 126632 sc-eQTL 3.70e-01 0.134 0.15 0.894 DC L1
ENSG00000111142 METAP2 -696331 sc-eQTL 4.40e-01 0.115 0.148 0.894 DC L1
ENSG00000120798 NR2C1 -296439 sc-eQTL 7.47e-01 0.0464 0.144 0.894 DC L1
ENSG00000136040 PLXNC1 628612 sc-eQTL 2.85e-01 0.143 0.134 0.894 DC L1
ENSG00000173588 CEP83 317201 sc-eQTL 8.86e-01 0.0171 0.119 0.894 DC L1
ENSG00000180263 FGD6 -440293 sc-eQTL 8.88e-01 -0.0187 0.133 0.894 DC L1
ENSG00000184752 NDUFA12 -226559 sc-eQTL 2.78e-01 0.121 0.112 0.894 DC L1
ENSG00000028203 VEZT -440557 sc-eQTL 6.73e-01 -0.0564 0.134 0.897 Mono L1
ENSG00000057704 TMCC3 126632 sc-eQTL 1.96e-01 0.134 0.104 0.897 Mono L1
ENSG00000111142 METAP2 -696331 sc-eQTL 5.69e-01 0.0607 0.106 0.897 Mono L1
ENSG00000120798 NR2C1 -296439 sc-eQTL 9.72e-01 0.00445 0.127 0.897 Mono L1
ENSG00000136040 PLXNC1 628612 sc-eQTL 9.57e-01 -0.00462 0.0862 0.897 Mono L1
ENSG00000173588 CEP83 317201 sc-eQTL 4.74e-02 -0.252 0.126 0.897 Mono L1
ENSG00000180263 FGD6 -440293 sc-eQTL 9.88e-01 -0.00171 0.113 0.897 Mono L1
ENSG00000184752 NDUFA12 -226559 sc-eQTL 2.00e-01 0.104 0.0812 0.897 Mono L1
ENSG00000028203 VEZT -440557 sc-eQTL 7.87e-01 -0.0359 0.132 0.897 NK L1
ENSG00000057704 TMCC3 126632 sc-eQTL 5.04e-02 0.244 0.124 0.897 NK L1
ENSG00000111142 METAP2 -696331 sc-eQTL 5.23e-01 0.067 0.105 0.897 NK L1
ENSG00000120798 NR2C1 -296439 sc-eQTL 5.43e-01 0.0756 0.124 0.897 NK L1
ENSG00000136040 PLXNC1 628612 sc-eQTL 2.86e-01 -0.109 0.102 0.897 NK L1
ENSG00000173588 CEP83 317201 sc-eQTL 6.65e-01 0.0503 0.116 0.897 NK L1
ENSG00000184752 NDUFA12 -226559 sc-eQTL 3.98e-01 0.0726 0.0856 0.897 NK L1
ENSG00000028203 VEZT -440557 sc-eQTL 1.42e-01 -0.217 0.147 0.897 Other_T L1
ENSG00000057704 TMCC3 126632 sc-eQTL 8.50e-01 0.0238 0.126 0.897 Other_T L1
ENSG00000111142 METAP2 -696331 sc-eQTL 2.00e-02 0.266 0.114 0.897 Other_T L1
ENSG00000120798 NR2C1 -296439 sc-eQTL 5.41e-01 -0.0879 0.143 0.897 Other_T L1
ENSG00000136040 PLXNC1 628612 sc-eQTL 9.82e-01 -0.00261 0.117 0.897 Other_T L1
ENSG00000173588 CEP83 317201 sc-eQTL 8.23e-01 -0.0293 0.131 0.897 Other_T L1
ENSG00000184752 NDUFA12 -226559 sc-eQTL 7.02e-01 0.0279 0.0729 0.897 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -440557 sc-eQTL 8.15e-01 -0.0373 0.159 0.885 B_Activated L2
ENSG00000057704 TMCC3 126632 sc-eQTL 2.18e-01 -0.167 0.135 0.885 B_Activated L2
ENSG00000111142 METAP2 -696331 sc-eQTL 4.44e-01 0.127 0.166 0.885 B_Activated L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 7.26e-01 0.0558 0.159 0.885 B_Activated L2
ENSG00000136014 USP44 -774287 sc-eQTL 4.12e-01 -0.0997 0.121 0.885 B_Activated L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 7.19e-01 -0.0462 0.128 0.885 B_Activated L2
ENSG00000173588 CEP83 317201 sc-eQTL 3.62e-02 0.333 0.158 0.885 B_Activated L2
ENSG00000180263 FGD6 -440293 sc-eQTL 2.22e-01 -0.137 0.112 0.885 B_Activated L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 6.60e-01 -0.0618 0.141 0.885 B_Activated L2
ENSG00000028203 VEZT -440557 sc-eQTL 4.68e-01 -0.105 0.145 0.897 B_Intermediate L2
ENSG00000057704 TMCC3 126632 sc-eQTL 3.99e-01 0.124 0.147 0.897 B_Intermediate L2
ENSG00000111142 METAP2 -696331 sc-eQTL 9.33e-01 0.0112 0.134 0.897 B_Intermediate L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 3.31e-01 0.143 0.147 0.897 B_Intermediate L2
ENSG00000136014 USP44 -774287 sc-eQTL 4.30e-01 -0.119 0.15 0.897 B_Intermediate L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 2.48e-01 -0.143 0.123 0.897 B_Intermediate L2
ENSG00000173588 CEP83 317201 sc-eQTL 8.69e-01 -0.0226 0.137 0.897 B_Intermediate L2
ENSG00000180263 FGD6 -440293 sc-eQTL 7.13e-01 -0.0495 0.134 0.897 B_Intermediate L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 5.14e-01 -0.0726 0.111 0.897 B_Intermediate L2
ENSG00000028203 VEZT -440557 sc-eQTL 7.72e-01 -0.0439 0.151 0.897 B_Memory L2
ENSG00000057704 TMCC3 126632 sc-eQTL 4.29e-01 -0.121 0.153 0.897 B_Memory L2
ENSG00000111142 METAP2 -696331 sc-eQTL 8.18e-01 0.0338 0.147 0.897 B_Memory L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 7.21e-03 -0.42 0.155 0.897 B_Memory L2
ENSG00000136014 USP44 -774287 sc-eQTL 8.72e-01 -0.0227 0.14 0.897 B_Memory L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 5.58e-01 -0.0696 0.119 0.897 B_Memory L2
ENSG00000173588 CEP83 317201 sc-eQTL 7.11e-01 0.0514 0.138 0.897 B_Memory L2
ENSG00000180263 FGD6 -440293 sc-eQTL 7.56e-01 -0.0435 0.14 0.897 B_Memory L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 6.24e-01 -0.0551 0.112 0.897 B_Memory L2
ENSG00000028203 VEZT -440557 sc-eQTL 7.94e-02 -0.252 0.143 0.897 B_Naive1 L2
ENSG00000057704 TMCC3 126632 sc-eQTL 3.66e-01 -0.132 0.146 0.897 B_Naive1 L2
ENSG00000111142 METAP2 -696331 sc-eQTL 6.54e-01 0.055 0.123 0.897 B_Naive1 L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 8.27e-01 -0.0328 0.15 0.897 B_Naive1 L2
ENSG00000136014 USP44 -774287 sc-eQTL 6.69e-01 0.0631 0.148 0.897 B_Naive1 L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 1.86e-01 -0.164 0.123 0.897 B_Naive1 L2
ENSG00000173588 CEP83 317201 sc-eQTL 1.52e-01 -0.183 0.127 0.897 B_Naive1 L2
ENSG00000180263 FGD6 -440293 sc-eQTL 6.77e-01 -0.0585 0.14 0.897 B_Naive1 L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 6.23e-01 0.0403 0.0817 0.897 B_Naive1 L2
ENSG00000028203 VEZT -440557 sc-eQTL 4.43e-01 -0.12 0.156 0.897 B_Naive2 L2
ENSG00000057704 TMCC3 126632 sc-eQTL 7.07e-01 0.0539 0.143 0.897 B_Naive2 L2
ENSG00000111142 METAP2 -696331 sc-eQTL 4.75e-01 0.103 0.145 0.897 B_Naive2 L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 1.08e-01 -0.254 0.157 0.897 B_Naive2 L2
ENSG00000136014 USP44 -774287 sc-eQTL 2.44e-01 0.168 0.144 0.897 B_Naive2 L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 3.53e-01 -0.124 0.134 0.897 B_Naive2 L2
ENSG00000173588 CEP83 317201 sc-eQTL 3.58e-01 -0.13 0.141 0.897 B_Naive2 L2
ENSG00000180263 FGD6 -440293 sc-eQTL 3.35e-01 0.114 0.118 0.897 B_Naive2 L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 6.89e-01 0.0466 0.116 0.897 B_Naive2 L2
ENSG00000028203 VEZT -440557 sc-eQTL 5.85e-01 0.0846 0.155 0.9 CD4_CTL L2
ENSG00000111142 METAP2 -696331 sc-eQTL 4.85e-01 0.113 0.161 0.9 CD4_CTL L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 8.86e-02 0.276 0.161 0.9 CD4_CTL L2
ENSG00000136014 USP44 -774287 sc-eQTL 7.94e-01 0.0337 0.129 0.9 CD4_CTL L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 5.71e-01 -0.0819 0.144 0.9 CD4_CTL L2
ENSG00000173588 CEP83 317201 sc-eQTL 5.38e-01 -0.091 0.148 0.9 CD4_CTL L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 5.26e-01 -0.0845 0.133 0.9 CD4_CTL L2
ENSG00000028203 VEZT -440557 sc-eQTL 3.11e-01 0.117 0.116 0.897 CD4_Naive L2
ENSG00000111142 METAP2 -696331 sc-eQTL 6.72e-01 0.0425 0.1 0.897 CD4_Naive L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 2.87e-01 0.13 0.122 0.897 CD4_Naive L2
ENSG00000136014 USP44 -774287 sc-eQTL 6.75e-01 0.0591 0.141 0.897 CD4_Naive L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 4.62e-01 0.0706 0.0959 0.897 CD4_Naive L2
ENSG00000173588 CEP83 317201 sc-eQTL 6.33e-01 -0.0496 0.104 0.897 CD4_Naive L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 7.44e-02 0.159 0.0885 0.897 CD4_Naive L2
ENSG00000028203 VEZT -440557 sc-eQTL 1.72e-01 -0.166 0.121 0.897 CD4_TCM L2
ENSG00000111142 METAP2 -696331 sc-eQTL 2.54e-01 -0.13 0.114 0.897 CD4_TCM L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 6.43e-01 0.0615 0.133 0.897 CD4_TCM L2
ENSG00000136014 USP44 -774287 sc-eQTL 9.58e-01 -0.00819 0.154 0.897 CD4_TCM L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 8.52e-01 0.0211 0.114 0.897 CD4_TCM L2
ENSG00000173588 CEP83 317201 sc-eQTL 3.44e-01 -0.115 0.121 0.897 CD4_TCM L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 4.49e-01 0.079 0.104 0.897 CD4_TCM L2
ENSG00000028203 VEZT -440557 sc-eQTL 8.03e-01 -0.039 0.156 0.897 CD4_TEM L2
ENSG00000111142 METAP2 -696331 sc-eQTL 4.95e-01 0.0946 0.138 0.897 CD4_TEM L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 2.00e-01 0.186 0.145 0.897 CD4_TEM L2
ENSG00000136014 USP44 -774287 sc-eQTL 8.47e-01 0.0281 0.146 0.897 CD4_TEM L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 1.57e-01 -0.176 0.124 0.897 CD4_TEM L2
ENSG00000173588 CEP83 317201 sc-eQTL 6.30e-01 0.0675 0.14 0.897 CD4_TEM L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 4.57e-01 0.0942 0.126 0.897 CD4_TEM L2
ENSG00000028203 VEZT -440557 sc-eQTL 1.79e-01 -0.186 0.138 0.897 CD8_CTL L2
ENSG00000057704 TMCC3 126632 sc-eQTL 2.83e-01 0.131 0.122 0.897 CD8_CTL L2
ENSG00000111142 METAP2 -696331 sc-eQTL 7.94e-01 -0.0363 0.139 0.897 CD8_CTL L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 6.84e-01 0.0625 0.153 0.897 CD8_CTL L2
ENSG00000136014 USP44 -774287 sc-eQTL 6.82e-01 -0.0602 0.147 0.897 CD8_CTL L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 5.79e-01 0.0696 0.125 0.897 CD8_CTL L2
ENSG00000173588 CEP83 317201 sc-eQTL 3.35e-01 -0.133 0.138 0.897 CD8_CTL L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 3.65e-01 0.0985 0.109 0.897 CD8_CTL L2
ENSG00000028203 VEZT -440557 sc-eQTL 7.09e-01 -0.0522 0.14 0.897 CD8_Naive L2
ENSG00000057704 TMCC3 126632 sc-eQTL 2.76e-01 0.119 0.109 0.897 CD8_Naive L2
ENSG00000111142 METAP2 -696331 sc-eQTL 4.95e-01 0.0864 0.126 0.897 CD8_Naive L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 1.72e-01 -0.191 0.14 0.897 CD8_Naive L2
ENSG00000136014 USP44 -774287 sc-eQTL 3.64e-01 0.115 0.126 0.897 CD8_Naive L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 1.78e-01 0.172 0.128 0.897 CD8_Naive L2
ENSG00000173588 CEP83 317201 sc-eQTL 5.06e-01 -0.0823 0.123 0.897 CD8_Naive L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 2.00e-01 0.131 0.102 0.897 CD8_Naive L2
ENSG00000028203 VEZT -440557 sc-eQTL 5.70e-01 -0.0864 0.152 0.894 CD8_TCM L2
ENSG00000057704 TMCC3 126632 sc-eQTL 6.54e-01 0.0526 0.117 0.894 CD8_TCM L2
ENSG00000111142 METAP2 -696331 sc-eQTL 2.39e-01 0.181 0.153 0.894 CD8_TCM L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 8.00e-01 -0.0393 0.155 0.894 CD8_TCM L2
ENSG00000136014 USP44 -774287 sc-eQTL 2.91e-01 0.147 0.139 0.894 CD8_TCM L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 8.20e-01 0.0333 0.147 0.894 CD8_TCM L2
ENSG00000173588 CEP83 317201 sc-eQTL 1.27e-01 0.229 0.15 0.894 CD8_TCM L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 7.59e-01 0.0373 0.121 0.894 CD8_TCM L2
ENSG00000028203 VEZT -440557 sc-eQTL 7.64e-01 0.0476 0.158 0.9 CD8_TEM L2
ENSG00000057704 TMCC3 126632 sc-eQTL 4.71e-01 -0.0983 0.136 0.9 CD8_TEM L2
ENSG00000111142 METAP2 -696331 sc-eQTL 6.26e-01 0.075 0.154 0.9 CD8_TEM L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 8.29e-02 -0.28 0.161 0.9 CD8_TEM L2
ENSG00000136014 USP44 -774287 sc-eQTL 4.43e-01 0.103 0.134 0.9 CD8_TEM L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 4.19e-01 0.124 0.153 0.9 CD8_TEM L2
ENSG00000173588 CEP83 317201 sc-eQTL 9.94e-01 -0.00117 0.158 0.9 CD8_TEM L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 8.25e-01 0.0299 0.135 0.9 CD8_TEM L2
ENSG00000028203 VEZT -440557 sc-eQTL 4.68e-01 -0.113 0.155 0.898 MAIT L2
ENSG00000057704 TMCC3 126632 sc-eQTL 8.07e-01 0.0322 0.132 0.898 MAIT L2
ENSG00000111142 METAP2 -696331 sc-eQTL 1.02e-02 0.386 0.149 0.898 MAIT L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 7.17e-02 -0.263 0.146 0.898 MAIT L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 7.89e-01 0.0346 0.129 0.898 MAIT L2
ENSG00000173588 CEP83 317201 sc-eQTL 9.52e-01 -0.00892 0.148 0.898 MAIT L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 2.74e-01 0.141 0.129 0.898 MAIT L2
ENSG00000028203 VEZT -440557 sc-eQTL 2.87e-01 -0.162 0.152 0.896 NK_CD56bright L2
ENSG00000057704 TMCC3 126632 sc-eQTL 4.47e-01 0.111 0.146 0.896 NK_CD56bright L2
ENSG00000111142 METAP2 -696331 sc-eQTL 4.47e-01 0.114 0.15 0.896 NK_CD56bright L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 5.08e-01 0.104 0.157 0.896 NK_CD56bright L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 2.05e-01 -0.164 0.129 0.896 NK_CD56bright L2
ENSG00000173588 CEP83 317201 sc-eQTL 9.07e-01 0.0154 0.131 0.896 NK_CD56bright L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 2.16e-01 0.155 0.125 0.896 NK_CD56bright L2
ENSG00000028203 VEZT -440557 sc-eQTL 5.67e-01 -0.0851 0.148 0.897 NK_CD56dim L2
ENSG00000057704 TMCC3 126632 sc-eQTL 2.74e-01 0.142 0.129 0.897 NK_CD56dim L2
ENSG00000111142 METAP2 -696331 sc-eQTL 2.72e-01 0.147 0.134 0.897 NK_CD56dim L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 2.92e-01 0.144 0.136 0.897 NK_CD56dim L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 6.83e-01 -0.0491 0.12 0.897 NK_CD56dim L2
ENSG00000173588 CEP83 317201 sc-eQTL 7.54e-01 0.0436 0.139 0.897 NK_CD56dim L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 5.30e-01 0.0608 0.0967 0.897 NK_CD56dim L2
ENSG00000028203 VEZT -440557 sc-eQTL 8.82e-01 0.0247 0.166 0.9 NK_HLA L2
ENSG00000057704 TMCC3 126632 sc-eQTL 3.89e-02 0.303 0.146 0.9 NK_HLA L2
ENSG00000111142 METAP2 -696331 sc-eQTL 4.07e-01 0.128 0.155 0.9 NK_HLA L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 3.78e-01 0.144 0.163 0.9 NK_HLA L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 6.22e-01 0.0657 0.133 0.9 NK_HLA L2
ENSG00000173588 CEP83 317201 sc-eQTL 9.06e-01 -0.0181 0.153 0.9 NK_HLA L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 4.57e-01 0.102 0.138 0.9 NK_HLA L2
ENSG00000028203 VEZT -440557 sc-eQTL 7.61e-01 -0.0417 0.137 0.897 NK_cytokine L2
ENSG00000057704 TMCC3 126632 sc-eQTL 4.72e-01 0.101 0.14 0.897 NK_cytokine L2
ENSG00000111142 METAP2 -696331 sc-eQTL 3.54e-01 -0.129 0.139 0.897 NK_cytokine L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 5.44e-01 -0.0875 0.144 0.897 NK_cytokine L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 1.41e-01 -0.183 0.124 0.897 NK_cytokine L2
ENSG00000173588 CEP83 317201 sc-eQTL 9.54e-01 -0.00832 0.143 0.897 NK_cytokine L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 2.69e-01 0.11 0.0996 0.897 NK_cytokine L2
ENSG00000028203 VEZT -440557 sc-eQTL 2.99e-01 -0.209 0.2 0.904 PB L2
ENSG00000057704 TMCC3 126632 sc-eQTL 8.35e-01 -0.0378 0.181 0.904 PB L2
ENSG00000111142 METAP2 -696331 sc-eQTL 8.59e-01 0.0358 0.2 0.904 PB L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 2.06e-01 0.241 0.189 0.904 PB L2
ENSG00000136014 USP44 -774287 sc-eQTL 8.98e-01 -0.0229 0.179 0.904 PB L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 8.80e-01 -0.0281 0.185 0.904 PB L2
ENSG00000173588 CEP83 317201 sc-eQTL 2.29e-01 0.232 0.192 0.904 PB L2
ENSG00000180263 FGD6 -440293 sc-eQTL 4.66e-01 -0.117 0.16 0.904 PB L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 2.66e-02 -0.248 0.11 0.904 PB L2
ENSG00000028203 VEZT -440557 sc-eQTL 7.27e-01 -0.0509 0.146 0.898 Pro_T L2
ENSG00000057704 TMCC3 126632 sc-eQTL 2.38e-01 -0.153 0.129 0.898 Pro_T L2
ENSG00000111142 METAP2 -696331 sc-eQTL 2.42e-01 0.146 0.125 0.898 Pro_T L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 9.89e-01 -0.00212 0.151 0.898 Pro_T L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 4.25e-01 -0.118 0.147 0.898 Pro_T L2
ENSG00000173588 CEP83 317201 sc-eQTL 5.62e-01 0.0848 0.146 0.898 Pro_T L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 4.52e-01 -0.0687 0.0912 0.898 Pro_T L2
ENSG00000028203 VEZT -440557 sc-eQTL 3.83e-01 -0.131 0.15 0.897 Treg L2
ENSG00000111142 METAP2 -696331 sc-eQTL 3.18e-02 0.303 0.14 0.897 Treg L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 2.26e-01 0.182 0.15 0.897 Treg L2
ENSG00000136014 USP44 -774287 sc-eQTL 3.58e-01 -0.123 0.134 0.897 Treg L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 8.95e-01 0.0182 0.138 0.897 Treg L2
ENSG00000173588 CEP83 317201 sc-eQTL 6.33e-01 0.0707 0.148 0.897 Treg L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 3.75e-01 0.101 0.113 0.897 Treg L2
ENSG00000028203 VEZT -440557 sc-eQTL 5.12e-01 0.093 0.142 0.89 cDC L2
ENSG00000057704 TMCC3 126632 sc-eQTL 8.63e-01 0.0265 0.153 0.89 cDC L2
ENSG00000111142 METAP2 -696331 sc-eQTL 8.21e-01 0.0352 0.155 0.89 cDC L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 4.16e-01 -0.122 0.149 0.89 cDC L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 7.93e-01 0.0351 0.134 0.89 cDC L2
ENSG00000173588 CEP83 317201 sc-eQTL 4.44e-01 -0.0959 0.125 0.89 cDC L2
ENSG00000180263 FGD6 -440293 sc-eQTL 4.27e-01 -0.114 0.144 0.89 cDC L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 2.03e-01 0.156 0.122 0.89 cDC L2
ENSG00000028203 VEZT -440557 sc-eQTL 9.57e-01 -0.00799 0.149 0.897 cMono_IL1B L2
ENSG00000057704 TMCC3 126632 sc-eQTL 2.22e-01 0.142 0.116 0.897 cMono_IL1B L2
ENSG00000111142 METAP2 -696331 sc-eQTL 2.42e-01 0.15 0.128 0.897 cMono_IL1B L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 7.19e-01 -0.0487 0.135 0.897 cMono_IL1B L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 8.97e-01 0.0134 0.103 0.897 cMono_IL1B L2
ENSG00000173588 CEP83 317201 sc-eQTL 3.20e-01 -0.139 0.14 0.897 cMono_IL1B L2
ENSG00000180263 FGD6 -440293 sc-eQTL 8.58e-01 0.0214 0.12 0.897 cMono_IL1B L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 8.71e-01 0.0138 0.085 0.897 cMono_IL1B L2
ENSG00000028203 VEZT -440557 sc-eQTL 9.72e-01 0.00537 0.151 0.897 cMono_S100A L2
ENSG00000057704 TMCC3 126632 sc-eQTL 1.17e-01 0.207 0.131 0.897 cMono_S100A L2
ENSG00000111142 METAP2 -696331 sc-eQTL 9.94e-01 0.00103 0.146 0.897 cMono_S100A L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 7.77e-01 -0.0408 0.144 0.897 cMono_S100A L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 8.66e-01 -0.0182 0.108 0.897 cMono_S100A L2
ENSG00000173588 CEP83 317201 sc-eQTL 4.82e-02 -0.3 0.151 0.897 cMono_S100A L2
ENSG00000180263 FGD6 -440293 sc-eQTL 9.13e-01 -0.0153 0.14 0.897 cMono_S100A L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 6.96e-01 0.0388 0.0993 0.897 cMono_S100A L2
ENSG00000028203 VEZT -440557 sc-eQTL 3.46e-01 -0.169 0.178 0.888 gdT L2
ENSG00000057704 TMCC3 126632 sc-eQTL 4.65e-01 0.1 0.137 0.888 gdT L2
ENSG00000111142 METAP2 -696331 sc-eQTL 2.05e-01 0.215 0.169 0.888 gdT L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 9.66e-02 0.301 0.18 0.888 gdT L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 5.34e-01 -0.108 0.172 0.888 gdT L2
ENSG00000173588 CEP83 317201 sc-eQTL 1.04e-01 -0.273 0.167 0.888 gdT L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 6.38e-01 0.0691 0.147 0.888 gdT L2
ENSG00000028203 VEZT -440557 sc-eQTL 6.41e-01 -0.0746 0.16 0.898 intMono L2
ENSG00000057704 TMCC3 126632 sc-eQTL 9.15e-01 0.0167 0.155 0.898 intMono L2
ENSG00000111142 METAP2 -696331 sc-eQTL 3.35e-01 0.157 0.163 0.898 intMono L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 5.38e-01 0.0937 0.152 0.898 intMono L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 3.75e-01 -0.116 0.131 0.898 intMono L2
ENSG00000173588 CEP83 317201 sc-eQTL 8.65e-01 0.0269 0.158 0.898 intMono L2
ENSG00000180263 FGD6 -440293 sc-eQTL 8.65e-01 0.0241 0.142 0.898 intMono L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 2.33e-01 0.12 0.101 0.898 intMono L2
ENSG00000028203 VEZT -440557 sc-eQTL 7.77e-01 -0.0404 0.143 0.894 ncMono L2
ENSG00000057704 TMCC3 126632 sc-eQTL 9.67e-01 -0.00572 0.138 0.894 ncMono L2
ENSG00000111142 METAP2 -696331 sc-eQTL 7.01e-01 0.0577 0.15 0.894 ncMono L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 4.36e-01 0.116 0.149 0.894 ncMono L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 6.70e-01 0.0406 0.0949 0.894 ncMono L2
ENSG00000173588 CEP83 317201 sc-eQTL 9.92e-01 0.00147 0.149 0.894 ncMono L2
ENSG00000180263 FGD6 -440293 sc-eQTL 6.64e-01 0.0614 0.141 0.894 ncMono L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 6.11e-01 0.0639 0.125 0.894 ncMono L2
ENSG00000028203 VEZT -440557 sc-eQTL 7.89e-01 -0.0418 0.156 0.884 pDC L2
ENSG00000057704 TMCC3 126632 sc-eQTL 1.58e-01 0.215 0.151 0.884 pDC L2
ENSG00000111142 METAP2 -696331 sc-eQTL 3.73e-01 0.142 0.159 0.884 pDC L2
ENSG00000120798 NR2C1 -296439 sc-eQTL 6.17e-02 0.293 0.156 0.884 pDC L2
ENSG00000136040 PLXNC1 628612 sc-eQTL 3.12e-01 0.153 0.151 0.884 pDC L2
ENSG00000173588 CEP83 317201 sc-eQTL 3.66e-01 0.148 0.163 0.884 pDC L2
ENSG00000180263 FGD6 -440293 sc-eQTL 3.28e-01 0.134 0.137 0.884 pDC L2
ENSG00000184752 NDUFA12 -226559 sc-eQTL 7.05e-01 0.0512 0.135 0.884 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -440557 sc-eQTL 3.05e-01 -0.149 0.145 0.897 B_Memory LOneK1K
ENSG00000057704 TMCC3 126632 sc-eQTL 8.80e-01 -0.0232 0.154 0.897 B_Memory LOneK1K
ENSG00000111142 METAP2 -696331 sc-eQTL 6.30e-01 0.0654 0.136 0.897 B_Memory LOneK1K
ENSG00000120798 NR2C1 -296439 sc-eQTL 7.81e-01 -0.0434 0.156 0.897 B_Memory LOneK1K
ENSG00000136014 USP44 -774287 sc-eQTL 4.65e-01 -0.106 0.144 0.897 B_Memory LOneK1K
ENSG00000136040 PLXNC1 628612 sc-eQTL 2.22e-01 -0.114 0.0927 0.897 B_Memory LOneK1K
ENSG00000173588 CEP83 317201 sc-eQTL 5.41e-01 0.0794 0.13 0.897 B_Memory LOneK1K
ENSG00000180263 FGD6 -440293 sc-eQTL 6.52e-01 -0.0584 0.129 0.897 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -226559 sc-eQTL 4.48e-01 -0.0677 0.0891 0.897 B_Memory LOneK1K
ENSG00000028203 VEZT -440557 sc-eQTL 8.47e-02 -0.238 0.137 0.897 B_Naive LOneK1K
ENSG00000057704 TMCC3 126632 sc-eQTL 6.38e-01 -0.0659 0.14 0.897 B_Naive LOneK1K
ENSG00000111142 METAP2 -696331 sc-eQTL 6.13e-01 0.0584 0.115 0.897 B_Naive LOneK1K
ENSG00000120798 NR2C1 -296439 sc-eQTL 3.89e-01 -0.129 0.15 0.897 B_Naive LOneK1K
ENSG00000136014 USP44 -774287 sc-eQTL 2.83e-01 0.143 0.133 0.897 B_Naive LOneK1K
ENSG00000136040 PLXNC1 628612 sc-eQTL 2.08e-01 -0.143 0.113 0.897 B_Naive LOneK1K
ENSG00000173588 CEP83 317201 sc-eQTL 5.93e-02 -0.223 0.118 0.897 B_Naive LOneK1K
ENSG00000180263 FGD6 -440293 sc-eQTL 7.85e-01 0.0399 0.146 0.897 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -226559 sc-eQTL 8.81e-01 0.0122 0.0809 0.897 B_Naive LOneK1K
ENSG00000028203 VEZT -440557 sc-eQTL 8.58e-01 -0.0245 0.137 0.897 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 126632 sc-eQTL 1.08e-01 0.173 0.108 0.897 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -696331 sc-eQTL 6.67e-01 0.0503 0.117 0.897 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -296439 sc-eQTL 6.16e-01 -0.0637 0.127 0.897 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 628612 sc-eQTL 8.95e-01 -0.0127 0.0959 0.897 CD14_Mono LOneK1K
ENSG00000173588 CEP83 317201 sc-eQTL 2.66e-02 -0.289 0.129 0.897 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -440293 sc-eQTL 9.93e-01 0.00104 0.118 0.897 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -226559 sc-eQTL 5.52e-01 0.0483 0.081 0.897 CD14_Mono LOneK1K
ENSG00000028203 VEZT -440557 sc-eQTL 6.12e-01 -0.077 0.152 0.897 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 126632 sc-eQTL 8.97e-01 0.0183 0.141 0.897 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -696331 sc-eQTL 4.00e-01 0.117 0.139 0.897 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -296439 sc-eQTL 5.87e-01 0.0848 0.156 0.897 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 628612 sc-eQTL 7.87e-01 0.0244 0.0898 0.897 CD16_Mono LOneK1K
ENSG00000173588 CEP83 317201 sc-eQTL 9.69e-01 -0.00574 0.149 0.897 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -440293 sc-eQTL 7.56e-01 0.0396 0.127 0.897 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -226559 sc-eQTL 2.06e-01 0.129 0.101 0.897 CD16_Mono LOneK1K
ENSG00000028203 VEZT -440557 sc-eQTL 7.42e-01 -0.0449 0.136 0.897 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 126632 sc-eQTL 4.57e-02 0.253 0.126 0.897 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -696331 sc-eQTL 5.11e-01 0.0716 0.109 0.897 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -296439 sc-eQTL 4.70e-01 0.0892 0.123 0.897 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 628612 sc-eQTL 3.42e-01 -0.103 0.108 0.897 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 317201 sc-eQTL 6.73e-01 0.0514 0.122 0.897 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -226559 sc-eQTL 5.03e-01 0.06 0.0893 0.897 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000184752 NDUFA12 -226559 eQTL 0.0315 0.0592 0.0275 0.0 0.0 0.113

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000184752 NDUFA12 -226559 1.44e-06 9.83e-07 3.28e-07 1.23e-06 3.4e-07 5.83e-07 1.55e-06 3.69e-07 1.49e-06 4.65e-07 1.86e-06 6.61e-07 2.29e-06 2.89e-07 5.22e-07 9.2e-07 9.33e-07 7.89e-07 8.13e-07 6.86e-07 6.61e-07 1.63e-06 9.18e-07 6.25e-07 2.16e-06 5.38e-07 8.75e-07 7.08e-07 1.48e-06 1.21e-06 6.78e-07 1.91e-07 2.19e-07 6.24e-07 5.21e-07 4.42e-07 5.1e-07 2.38e-07 5.01e-07 3.15e-07 2.88e-07 1.6e-06 1.1e-07 8.04e-08 1.69e-07 1.23e-07 2.33e-07 8.37e-08 9.51e-08