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Genes within 1Mb (chr12:94770729:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -447017 sc-eQTL 9.80e-02 -0.197 0.119 0.891 B L1
ENSG00000057704 TMCC3 120172 sc-eQTL 4.67e-01 -0.102 0.14 0.891 B L1
ENSG00000111142 METAP2 -702791 sc-eQTL 9.24e-01 0.0101 0.105 0.891 B L1
ENSG00000120798 NR2C1 -302899 sc-eQTL 5.68e-01 -0.0757 0.133 0.891 B L1
ENSG00000136014 USP44 -780747 sc-eQTL 5.37e-01 0.0749 0.121 0.891 B L1
ENSG00000136040 PLXNC1 622152 sc-eQTL 1.93e-01 -0.103 0.0792 0.891 B L1
ENSG00000173588 CEP83 310741 sc-eQTL 1.87e-01 -0.132 0.0999 0.891 B L1
ENSG00000180263 FGD6 -446753 sc-eQTL 7.01e-01 -0.0466 0.121 0.891 B L1
ENSG00000184752 NDUFA12 -233019 sc-eQTL 6.35e-01 -0.0275 0.0578 0.891 B L1
ENSG00000028203 VEZT -447017 sc-eQTL 7.93e-01 -0.026 0.099 0.891 CD4T L1
ENSG00000111142 METAP2 -702791 sc-eQTL 8.63e-01 -0.0148 0.0859 0.891 CD4T L1
ENSG00000120798 NR2C1 -302899 sc-eQTL 9.14e-02 0.161 0.0951 0.891 CD4T L1
ENSG00000136014 USP44 -780747 sc-eQTL 7.76e-01 0.0373 0.131 0.891 CD4T L1
ENSG00000136040 PLXNC1 622152 sc-eQTL 8.01e-01 -0.0212 0.0841 0.891 CD4T L1
ENSG00000173588 CEP83 310741 sc-eQTL 9.45e-01 -0.00612 0.0881 0.891 CD4T L1
ENSG00000184752 NDUFA12 -233019 sc-eQTL 1.99e-01 0.119 0.092 0.891 CD4T L1
ENSG00000028203 VEZT -447017 sc-eQTL 9.38e-01 -0.00912 0.118 0.891 CD8T L1
ENSG00000057704 TMCC3 120172 sc-eQTL 3.16e-01 0.0794 0.079 0.891 CD8T L1
ENSG00000111142 METAP2 -702791 sc-eQTL 4.29e-01 0.0798 0.101 0.891 CD8T L1
ENSG00000120798 NR2C1 -302899 sc-eQTL 6.02e-01 -0.0669 0.128 0.891 CD8T L1
ENSG00000136014 USP44 -780747 sc-eQTL 4.76e-01 -0.0818 0.115 0.891 CD8T L1
ENSG00000136040 PLXNC1 622152 sc-eQTL 4.57e-01 0.0812 0.109 0.891 CD8T L1
ENSG00000173588 CEP83 310741 sc-eQTL 3.47e-01 -0.0958 0.102 0.891 CD8T L1
ENSG00000184752 NDUFA12 -233019 sc-eQTL 4.94e-02 0.163 0.0826 0.891 CD8T L1
ENSG00000028203 VEZT -447017 sc-eQTL 4.96e-01 0.0946 0.139 0.89 DC L1
ENSG00000057704 TMCC3 120172 sc-eQTL 5.33e-01 0.0919 0.147 0.89 DC L1
ENSG00000111142 METAP2 -702791 sc-eQTL 4.77e-01 0.104 0.146 0.89 DC L1
ENSG00000120798 NR2C1 -302899 sc-eQTL 9.94e-01 0.00113 0.141 0.89 DC L1
ENSG00000136040 PLXNC1 622152 sc-eQTL 5.09e-01 0.0872 0.132 0.89 DC L1
ENSG00000173588 CEP83 310741 sc-eQTL 9.47e-01 0.00782 0.117 0.89 DC L1
ENSG00000180263 FGD6 -446753 sc-eQTL 8.05e-01 -0.0322 0.131 0.89 DC L1
ENSG00000184752 NDUFA12 -233019 sc-eQTL 4.18e-01 0.0891 0.11 0.89 DC L1
ENSG00000028203 VEZT -447017 sc-eQTL 6.00e-01 -0.0679 0.129 0.891 Mono L1
ENSG00000057704 TMCC3 120172 sc-eQTL 8.49e-02 0.173 0.1 0.891 Mono L1
ENSG00000111142 METAP2 -702791 sc-eQTL 7.43e-01 0.0339 0.103 0.891 Mono L1
ENSG00000120798 NR2C1 -302899 sc-eQTL 6.75e-01 -0.0516 0.123 0.891 Mono L1
ENSG00000136040 PLXNC1 622152 sc-eQTL 9.32e-01 -0.00716 0.0835 0.891 Mono L1
ENSG00000173588 CEP83 310741 sc-eQTL 4.37e-02 -0.248 0.122 0.891 Mono L1
ENSG00000180263 FGD6 -446753 sc-eQTL 7.84e-01 -0.0302 0.11 0.891 Mono L1
ENSG00000184752 NDUFA12 -233019 sc-eQTL 2.47e-01 0.0914 0.0787 0.891 Mono L1
ENSG00000028203 VEZT -447017 sc-eQTL 5.21e-01 -0.083 0.129 0.891 NK L1
ENSG00000057704 TMCC3 120172 sc-eQTL 1.12e-01 0.193 0.121 0.891 NK L1
ENSG00000111142 METAP2 -702791 sc-eQTL 5.90e-01 0.0552 0.102 0.891 NK L1
ENSG00000120798 NR2C1 -302899 sc-eQTL 4.06e-01 0.101 0.121 0.891 NK L1
ENSG00000136040 PLXNC1 622152 sc-eQTL 2.79e-01 -0.108 0.0995 0.891 NK L1
ENSG00000173588 CEP83 310741 sc-eQTL 7.22e-01 0.0404 0.113 0.891 NK L1
ENSG00000184752 NDUFA12 -233019 sc-eQTL 4.48e-01 0.0635 0.0835 0.891 NK L1
ENSG00000028203 VEZT -447017 sc-eQTL 1.71e-01 -0.197 0.143 0.891 Other_T L1
ENSG00000057704 TMCC3 120172 sc-eQTL 8.98e-01 -0.0157 0.123 0.891 Other_T L1
ENSG00000111142 METAP2 -702791 sc-eQTL 1.69e-02 0.266 0.11 0.891 Other_T L1
ENSG00000120798 NR2C1 -302899 sc-eQTL 4.03e-01 -0.117 0.139 0.891 Other_T L1
ENSG00000136040 PLXNC1 622152 sc-eQTL 7.02e-01 0.0434 0.113 0.891 Other_T L1
ENSG00000173588 CEP83 310741 sc-eQTL 9.60e-01 0.00644 0.128 0.891 Other_T L1
ENSG00000184752 NDUFA12 -233019 sc-eQTL 5.79e-01 0.0394 0.071 0.891 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -447017 sc-eQTL 8.93e-01 -0.0209 0.156 0.878 B_Activated L2
ENSG00000057704 TMCC3 120172 sc-eQTL 2.12e-01 -0.166 0.132 0.878 B_Activated L2
ENSG00000111142 METAP2 -702791 sc-eQTL 3.94e-01 0.138 0.162 0.878 B_Activated L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 7.19e-01 0.0562 0.156 0.878 B_Activated L2
ENSG00000136014 USP44 -780747 sc-eQTL 3.48e-01 -0.111 0.118 0.878 B_Activated L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 6.44e-01 -0.058 0.125 0.878 B_Activated L2
ENSG00000173588 CEP83 310741 sc-eQTL 2.08e-02 0.359 0.154 0.878 B_Activated L2
ENSG00000180263 FGD6 -446753 sc-eQTL 1.46e-01 -0.16 0.109 0.878 B_Activated L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 4.41e-01 -0.106 0.137 0.878 B_Activated L2
ENSG00000028203 VEZT -447017 sc-eQTL 3.53e-01 -0.132 0.142 0.891 B_Intermediate L2
ENSG00000057704 TMCC3 120172 sc-eQTL 3.70e-01 0.129 0.144 0.891 B_Intermediate L2
ENSG00000111142 METAP2 -702791 sc-eQTL 9.35e-01 0.0108 0.131 0.891 B_Intermediate L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 4.32e-01 0.113 0.144 0.891 B_Intermediate L2
ENSG00000136014 USP44 -780747 sc-eQTL 4.10e-01 -0.122 0.147 0.891 B_Intermediate L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 3.29e-01 -0.118 0.121 0.891 B_Intermediate L2
ENSG00000173588 CEP83 310741 sc-eQTL 8.22e-01 -0.0303 0.134 0.891 B_Intermediate L2
ENSG00000180263 FGD6 -446753 sc-eQTL 6.80e-01 -0.0544 0.132 0.891 B_Intermediate L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 7.88e-01 -0.0294 0.109 0.891 B_Intermediate L2
ENSG00000028203 VEZT -447017 sc-eQTL 7.69e-01 -0.0438 0.149 0.892 B_Memory L2
ENSG00000057704 TMCC3 120172 sc-eQTL 2.24e-01 -0.184 0.151 0.892 B_Memory L2
ENSG00000111142 METAP2 -702791 sc-eQTL 6.01e-01 0.0756 0.144 0.892 B_Memory L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 2.34e-02 -0.351 0.154 0.892 B_Memory L2
ENSG00000136014 USP44 -780747 sc-eQTL 9.17e-01 0.0144 0.138 0.892 B_Memory L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 7.84e-01 -0.0322 0.117 0.892 B_Memory L2
ENSG00000173588 CEP83 310741 sc-eQTL 9.92e-01 -0.00145 0.137 0.892 B_Memory L2
ENSG00000180263 FGD6 -446753 sc-eQTL 4.27e-01 -0.109 0.138 0.892 B_Memory L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 7.97e-01 -0.0286 0.111 0.892 B_Memory L2
ENSG00000028203 VEZT -447017 sc-eQTL 3.46e-02 -0.296 0.139 0.891 B_Naive1 L2
ENSG00000057704 TMCC3 120172 sc-eQTL 3.48e-01 -0.134 0.142 0.891 B_Naive1 L2
ENSG00000111142 METAP2 -702791 sc-eQTL 7.81e-01 0.0334 0.12 0.891 B_Naive1 L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 8.30e-01 0.0314 0.146 0.891 B_Naive1 L2
ENSG00000136014 USP44 -780747 sc-eQTL 6.61e-01 0.0634 0.144 0.891 B_Naive1 L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 3.15e-01 -0.122 0.121 0.891 B_Naive1 L2
ENSG00000173588 CEP83 310741 sc-eQTL 1.99e-01 -0.16 0.125 0.891 B_Naive1 L2
ENSG00000180263 FGD6 -446753 sc-eQTL 8.61e-01 -0.0241 0.137 0.891 B_Naive1 L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 6.63e-01 0.0348 0.0798 0.891 B_Naive1 L2
ENSG00000028203 VEZT -447017 sc-eQTL 2.67e-01 -0.17 0.152 0.891 B_Naive2 L2
ENSG00000057704 TMCC3 120172 sc-eQTL 7.90e-01 0.0373 0.14 0.891 B_Naive2 L2
ENSG00000111142 METAP2 -702791 sc-eQTL 7.71e-01 0.0412 0.141 0.891 B_Naive2 L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 1.45e-01 -0.225 0.154 0.891 B_Naive2 L2
ENSG00000136014 USP44 -780747 sc-eQTL 5.60e-01 0.0823 0.141 0.891 B_Naive2 L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 3.18e-01 -0.13 0.13 0.891 B_Naive2 L2
ENSG00000173588 CEP83 310741 sc-eQTL 2.76e-01 -0.15 0.138 0.891 B_Naive2 L2
ENSG00000180263 FGD6 -446753 sc-eQTL 6.42e-01 0.0538 0.116 0.891 B_Naive2 L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 7.65e-01 0.034 0.114 0.891 B_Naive2 L2
ENSG00000028203 VEZT -447017 sc-eQTL 7.37e-01 0.0506 0.151 0.893 CD4_CTL L2
ENSG00000111142 METAP2 -702791 sc-eQTL 8.26e-01 0.0347 0.157 0.893 CD4_CTL L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 1.25e-01 0.242 0.157 0.893 CD4_CTL L2
ENSG00000136014 USP44 -780747 sc-eQTL 6.77e-01 0.0522 0.125 0.893 CD4_CTL L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 7.60e-01 -0.0431 0.141 0.893 CD4_CTL L2
ENSG00000173588 CEP83 310741 sc-eQTL 6.07e-01 -0.0742 0.144 0.893 CD4_CTL L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 7.29e-01 -0.0449 0.13 0.893 CD4_CTL L2
ENSG00000028203 VEZT -447017 sc-eQTL 3.79e-01 0.0992 0.113 0.891 CD4_Naive L2
ENSG00000111142 METAP2 -702791 sc-eQTL 5.52e-01 0.0581 0.0976 0.891 CD4_Naive L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 2.41e-01 0.14 0.119 0.891 CD4_Naive L2
ENSG00000136014 USP44 -780747 sc-eQTL 6.16e-01 0.0689 0.137 0.891 CD4_Naive L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 6.35e-01 0.0444 0.0934 0.891 CD4_Naive L2
ENSG00000173588 CEP83 310741 sc-eQTL 9.10e-01 -0.0115 0.101 0.891 CD4_Naive L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 1.98e-01 0.112 0.0865 0.891 CD4_Naive L2
ENSG00000028203 VEZT -447017 sc-eQTL 3.76e-02 -0.245 0.117 0.891 CD4_TCM L2
ENSG00000111142 METAP2 -702791 sc-eQTL 1.76e-01 -0.15 0.11 0.891 CD4_TCM L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 6.93e-01 0.0509 0.129 0.891 CD4_TCM L2
ENSG00000136014 USP44 -780747 sc-eQTL 8.96e-01 -0.0197 0.15 0.891 CD4_TCM L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 5.60e-01 0.0644 0.11 0.891 CD4_TCM L2
ENSG00000173588 CEP83 310741 sc-eQTL 2.54e-01 -0.134 0.117 0.891 CD4_TCM L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 3.80e-01 0.089 0.101 0.891 CD4_TCM L2
ENSG00000028203 VEZT -447017 sc-eQTL 9.45e-01 -0.0105 0.152 0.891 CD4_TEM L2
ENSG00000111142 METAP2 -702791 sc-eQTL 8.19e-01 0.0308 0.134 0.891 CD4_TEM L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 3.48e-01 0.133 0.141 0.891 CD4_TEM L2
ENSG00000136014 USP44 -780747 sc-eQTL 9.07e-01 -0.0167 0.142 0.891 CD4_TEM L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 1.74e-01 -0.164 0.121 0.891 CD4_TEM L2
ENSG00000173588 CEP83 310741 sc-eQTL 6.33e-01 0.0651 0.136 0.891 CD4_TEM L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 3.71e-01 0.11 0.123 0.891 CD4_TEM L2
ENSG00000028203 VEZT -447017 sc-eQTL 1.20e-01 -0.21 0.134 0.891 CD8_CTL L2
ENSG00000057704 TMCC3 120172 sc-eQTL 1.58e-01 0.168 0.119 0.891 CD8_CTL L2
ENSG00000111142 METAP2 -702791 sc-eQTL 7.76e-01 -0.0386 0.135 0.891 CD8_CTL L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 6.16e-01 0.075 0.149 0.891 CD8_CTL L2
ENSG00000136014 USP44 -780747 sc-eQTL 4.61e-01 -0.106 0.143 0.891 CD8_CTL L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 8.55e-01 0.0224 0.122 0.891 CD8_CTL L2
ENSG00000173588 CEP83 310741 sc-eQTL 2.05e-01 -0.17 0.134 0.891 CD8_CTL L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 2.90e-01 0.112 0.106 0.891 CD8_CTL L2
ENSG00000028203 VEZT -447017 sc-eQTL 9.23e-01 -0.0132 0.136 0.891 CD8_Naive L2
ENSG00000057704 TMCC3 120172 sc-eQTL 6.13e-01 0.0539 0.107 0.891 CD8_Naive L2
ENSG00000111142 METAP2 -702791 sc-eQTL 3.54e-01 0.115 0.123 0.891 CD8_Naive L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 2.15e-01 -0.17 0.136 0.891 CD8_Naive L2
ENSG00000136014 USP44 -780747 sc-eQTL 9.89e-01 -0.00177 0.124 0.891 CD8_Naive L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 1.38e-01 0.185 0.125 0.891 CD8_Naive L2
ENSG00000173588 CEP83 310741 sc-eQTL 4.09e-01 -0.0997 0.121 0.891 CD8_Naive L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 2.42e-01 0.117 0.0997 0.891 CD8_Naive L2
ENSG00000028203 VEZT -447017 sc-eQTL 5.16e-01 -0.0962 0.148 0.887 CD8_TCM L2
ENSG00000057704 TMCC3 120172 sc-eQTL 7.90e-01 0.0305 0.114 0.887 CD8_TCM L2
ENSG00000111142 METAP2 -702791 sc-eQTL 3.05e-01 0.154 0.15 0.887 CD8_TCM L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 5.66e-01 -0.0868 0.151 0.887 CD8_TCM L2
ENSG00000136014 USP44 -780747 sc-eQTL 3.09e-01 0.138 0.135 0.887 CD8_TCM L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 8.71e-01 0.0233 0.143 0.887 CD8_TCM L2
ENSG00000173588 CEP83 310741 sc-eQTL 2.24e-01 0.179 0.146 0.887 CD8_TCM L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 8.39e-01 0.024 0.118 0.887 CD8_TCM L2
ENSG00000028203 VEZT -447017 sc-eQTL 7.29e-01 0.0532 0.153 0.893 CD8_TEM L2
ENSG00000057704 TMCC3 120172 sc-eQTL 3.46e-01 -0.124 0.132 0.893 CD8_TEM L2
ENSG00000111142 METAP2 -702791 sc-eQTL 7.98e-01 0.0382 0.149 0.893 CD8_TEM L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 9.22e-02 -0.263 0.155 0.893 CD8_TEM L2
ENSG00000136014 USP44 -780747 sc-eQTL 5.35e-01 0.0807 0.13 0.893 CD8_TEM L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 3.94e-01 0.126 0.148 0.893 CD8_TEM L2
ENSG00000173588 CEP83 310741 sc-eQTL 8.02e-01 0.0384 0.153 0.893 CD8_TEM L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 5.41e-01 0.0797 0.13 0.893 CD8_TEM L2
ENSG00000028203 VEZT -447017 sc-eQTL 3.30e-01 -0.147 0.15 0.892 MAIT L2
ENSG00000057704 TMCC3 120172 sc-eQTL 7.33e-01 -0.0436 0.127 0.892 MAIT L2
ENSG00000111142 METAP2 -702791 sc-eQTL 1.55e-02 0.352 0.144 0.892 MAIT L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 3.87e-02 -0.292 0.14 0.892 MAIT L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 3.86e-01 0.108 0.125 0.892 MAIT L2
ENSG00000173588 CEP83 310741 sc-eQTL 8.17e-01 -0.0331 0.143 0.892 MAIT L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 3.74e-01 0.111 0.125 0.892 MAIT L2
ENSG00000028203 VEZT -447017 sc-eQTL 3.16e-01 -0.15 0.149 0.889 NK_CD56bright L2
ENSG00000057704 TMCC3 120172 sc-eQTL 4.27e-01 0.114 0.143 0.889 NK_CD56bright L2
ENSG00000111142 METAP2 -702791 sc-eQTL 5.54e-01 0.0872 0.147 0.889 NK_CD56bright L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 4.77e-01 0.11 0.155 0.889 NK_CD56bright L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 2.30e-01 -0.152 0.126 0.889 NK_CD56bright L2
ENSG00000173588 CEP83 310741 sc-eQTL 9.98e-01 0.000276 0.128 0.889 NK_CD56bright L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 2.15e-01 0.152 0.123 0.889 NK_CD56bright L2
ENSG00000028203 VEZT -447017 sc-eQTL 2.54e-01 -0.165 0.144 0.89 NK_CD56dim L2
ENSG00000057704 TMCC3 120172 sc-eQTL 3.35e-01 0.122 0.126 0.89 NK_CD56dim L2
ENSG00000111142 METAP2 -702791 sc-eQTL 1.65e-01 0.181 0.13 0.89 NK_CD56dim L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 2.60e-01 0.15 0.133 0.89 NK_CD56dim L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 6.98e-01 -0.0455 0.117 0.89 NK_CD56dim L2
ENSG00000173588 CEP83 310741 sc-eQTL 6.65e-01 0.0587 0.135 0.89 NK_CD56dim L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 5.42e-01 0.0576 0.0942 0.89 NK_CD56dim L2
ENSG00000028203 VEZT -447017 sc-eQTL 7.76e-01 0.0459 0.161 0.893 NK_HLA L2
ENSG00000057704 TMCC3 120172 sc-eQTL 1.55e-01 0.203 0.142 0.893 NK_HLA L2
ENSG00000111142 METAP2 -702791 sc-eQTL 5.26e-01 0.0955 0.15 0.893 NK_HLA L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 2.85e-01 0.169 0.158 0.893 NK_HLA L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 7.15e-01 0.0474 0.13 0.893 NK_HLA L2
ENSG00000173588 CEP83 310741 sc-eQTL 7.26e-01 -0.0521 0.149 0.893 NK_HLA L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 6.58e-01 0.0593 0.134 0.893 NK_HLA L2
ENSG00000028203 VEZT -447017 sc-eQTL 6.87e-01 -0.054 0.134 0.89 NK_cytokine L2
ENSG00000057704 TMCC3 120172 sc-eQTL 5.58e-01 0.0805 0.137 0.89 NK_cytokine L2
ENSG00000111142 METAP2 -702791 sc-eQTL 3.19e-01 -0.135 0.135 0.89 NK_cytokine L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 7.25e-01 -0.0496 0.141 0.89 NK_cytokine L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 1.39e-01 -0.18 0.121 0.89 NK_cytokine L2
ENSG00000173588 CEP83 310741 sc-eQTL 9.81e-01 0.00325 0.14 0.89 NK_cytokine L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 2.33e-01 0.116 0.0971 0.89 NK_cytokine L2
ENSG00000028203 VEZT -447017 sc-eQTL 3.69e-01 -0.175 0.194 0.896 PB L2
ENSG00000057704 TMCC3 120172 sc-eQTL 9.69e-01 -0.00673 0.175 0.896 PB L2
ENSG00000111142 METAP2 -702791 sc-eQTL 6.82e-01 0.0798 0.194 0.896 PB L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 2.58e-01 0.209 0.184 0.896 PB L2
ENSG00000136014 USP44 -780747 sc-eQTL 7.79e-01 0.049 0.174 0.896 PB L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 9.75e-01 -0.00564 0.18 0.896 PB L2
ENSG00000173588 CEP83 310741 sc-eQTL 1.75e-01 0.253 0.185 0.896 PB L2
ENSG00000180263 FGD6 -446753 sc-eQTL 3.58e-01 -0.143 0.155 0.896 PB L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 1.64e-02 -0.259 0.106 0.896 PB L2
ENSG00000028203 VEZT -447017 sc-eQTL 8.37e-01 -0.0293 0.142 0.891 Pro_T L2
ENSG00000057704 TMCC3 120172 sc-eQTL 2.96e-01 -0.132 0.126 0.891 Pro_T L2
ENSG00000111142 METAP2 -702791 sc-eQTL 1.54e-01 0.174 0.121 0.891 Pro_T L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 8.74e-01 -0.0233 0.147 0.891 Pro_T L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 6.89e-01 -0.0577 0.144 0.891 Pro_T L2
ENSG00000173588 CEP83 310741 sc-eQTL 5.18e-01 0.0924 0.143 0.891 Pro_T L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 7.11e-01 -0.0331 0.0891 0.891 Pro_T L2
ENSG00000028203 VEZT -447017 sc-eQTL 1.47e-01 -0.212 0.146 0.891 Treg L2
ENSG00000111142 METAP2 -702791 sc-eQTL 3.69e-02 0.287 0.137 0.891 Treg L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 1.79e-01 0.196 0.145 0.891 Treg L2
ENSG00000136014 USP44 -780747 sc-eQTL 5.63e-01 -0.0757 0.131 0.891 Treg L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 6.15e-01 -0.0678 0.135 0.891 Treg L2
ENSG00000173588 CEP83 310741 sc-eQTL 7.89e-01 0.0386 0.144 0.891 Treg L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 5.37e-01 0.0682 0.11 0.891 Treg L2
ENSG00000028203 VEZT -447017 sc-eQTL 6.44e-01 0.0643 0.139 0.885 cDC L2
ENSG00000057704 TMCC3 120172 sc-eQTL 9.29e-01 0.0135 0.15 0.885 cDC L2
ENSG00000111142 METAP2 -702791 sc-eQTL 7.08e-01 0.0572 0.153 0.885 cDC L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 3.88e-01 -0.127 0.147 0.885 cDC L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 9.85e-01 0.00254 0.131 0.885 cDC L2
ENSG00000173588 CEP83 310741 sc-eQTL 4.30e-01 -0.0971 0.123 0.885 cDC L2
ENSG00000180263 FGD6 -446753 sc-eQTL 3.74e-01 -0.126 0.141 0.885 cDC L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 2.96e-01 0.126 0.12 0.885 cDC L2
ENSG00000028203 VEZT -447017 sc-eQTL 8.69e-01 -0.0237 0.144 0.891 cMono_IL1B L2
ENSG00000057704 TMCC3 120172 sc-eQTL 9.32e-02 0.19 0.112 0.891 cMono_IL1B L2
ENSG00000111142 METAP2 -702791 sc-eQTL 3.80e-01 0.109 0.124 0.891 cMono_IL1B L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 5.31e-01 -0.082 0.131 0.891 cMono_IL1B L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 8.09e-01 0.0242 0.0998 0.891 cMono_IL1B L2
ENSG00000173588 CEP83 310741 sc-eQTL 2.87e-01 -0.145 0.136 0.891 cMono_IL1B L2
ENSG00000180263 FGD6 -446753 sc-eQTL 8.66e-01 -0.0196 0.116 0.891 cMono_IL1B L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 9.36e-01 0.00663 0.0824 0.891 cMono_IL1B L2
ENSG00000028203 VEZT -447017 sc-eQTL 9.78e-01 0.00401 0.147 0.891 cMono_S100A L2
ENSG00000057704 TMCC3 120172 sc-eQTL 8.89e-02 0.218 0.127 0.891 cMono_S100A L2
ENSG00000111142 METAP2 -702791 sc-eQTL 9.09e-01 -0.0163 0.142 0.891 cMono_S100A L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 2.97e-01 -0.146 0.139 0.891 cMono_S100A L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 7.88e-01 -0.0282 0.105 0.891 cMono_S100A L2
ENSG00000173588 CEP83 310741 sc-eQTL 6.51e-02 -0.272 0.147 0.891 cMono_S100A L2
ENSG00000180263 FGD6 -446753 sc-eQTL 9.08e-01 -0.0156 0.136 0.891 cMono_S100A L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 7.76e-01 0.0275 0.0964 0.891 cMono_S100A L2
ENSG00000028203 VEZT -447017 sc-eQTL 3.05e-01 -0.182 0.177 0.882 gdT L2
ENSG00000057704 TMCC3 120172 sc-eQTL 4.89e-01 0.0941 0.136 0.882 gdT L2
ENSG00000111142 METAP2 -702791 sc-eQTL 3.03e-01 0.174 0.168 0.882 gdT L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 2.02e-01 0.23 0.179 0.882 gdT L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 6.43e-01 -0.0796 0.171 0.882 gdT L2
ENSG00000173588 CEP83 310741 sc-eQTL 1.97e-01 -0.216 0.166 0.882 gdT L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 8.41e-01 0.0293 0.145 0.882 gdT L2
ENSG00000028203 VEZT -447017 sc-eQTL 5.49e-01 -0.093 0.155 0.891 intMono L2
ENSG00000057704 TMCC3 120172 sc-eQTL 9.11e-01 0.0168 0.15 0.891 intMono L2
ENSG00000111142 METAP2 -702791 sc-eQTL 3.64e-01 0.143 0.158 0.891 intMono L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 4.73e-01 0.106 0.147 0.891 intMono L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 1.89e-01 -0.166 0.126 0.891 intMono L2
ENSG00000173588 CEP83 310741 sc-eQTL 9.04e-01 0.0184 0.153 0.891 intMono L2
ENSG00000180263 FGD6 -446753 sc-eQTL 7.52e-01 0.0433 0.137 0.891 intMono L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 3.61e-01 0.0895 0.0977 0.891 intMono L2
ENSG00000028203 VEZT -447017 sc-eQTL 9.13e-01 -0.0152 0.139 0.887 ncMono L2
ENSG00000057704 TMCC3 120172 sc-eQTL 8.77e-01 0.0208 0.135 0.887 ncMono L2
ENSG00000111142 METAP2 -702791 sc-eQTL 9.07e-01 0.0172 0.146 0.887 ncMono L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 1.97e-01 0.187 0.145 0.887 ncMono L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 5.75e-01 0.052 0.0926 0.887 ncMono L2
ENSG00000173588 CEP83 310741 sc-eQTL 5.73e-01 -0.0818 0.145 0.887 ncMono L2
ENSG00000180263 FGD6 -446753 sc-eQTL 7.33e-01 0.047 0.138 0.887 ncMono L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 6.76e-01 0.0513 0.122 0.887 ncMono L2
ENSG00000028203 VEZT -447017 sc-eQTL 8.64e-01 -0.0264 0.154 0.879 pDC L2
ENSG00000057704 TMCC3 120172 sc-eQTL 2.97e-01 0.156 0.149 0.879 pDC L2
ENSG00000111142 METAP2 -702791 sc-eQTL 5.70e-01 0.0891 0.157 0.879 pDC L2
ENSG00000120798 NR2C1 -302899 sc-eQTL 1.96e-01 0.2 0.154 0.879 pDC L2
ENSG00000136040 PLXNC1 622152 sc-eQTL 5.71e-01 0.0845 0.149 0.879 pDC L2
ENSG00000173588 CEP83 310741 sc-eQTL 2.88e-01 0.17 0.16 0.879 pDC L2
ENSG00000180263 FGD6 -446753 sc-eQTL 5.23e-01 0.0863 0.135 0.879 pDC L2
ENSG00000184752 NDUFA12 -233019 sc-eQTL 8.28e-01 0.0289 0.133 0.879 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -447017 sc-eQTL 3.16e-01 -0.143 0.143 0.891 B_Memory LOneK1K
ENSG00000057704 TMCC3 120172 sc-eQTL 6.46e-01 -0.0693 0.151 0.891 B_Memory LOneK1K
ENSG00000111142 METAP2 -702791 sc-eQTL 6.38e-01 0.0627 0.133 0.891 B_Memory LOneK1K
ENSG00000120798 NR2C1 -302899 sc-eQTL 9.71e-01 -0.00549 0.153 0.891 B_Memory LOneK1K
ENSG00000136014 USP44 -780747 sc-eQTL 4.67e-01 -0.103 0.141 0.891 B_Memory LOneK1K
ENSG00000136040 PLXNC1 622152 sc-eQTL 1.93e-01 -0.119 0.0909 0.891 B_Memory LOneK1K
ENSG00000173588 CEP83 310741 sc-eQTL 8.19e-01 0.0292 0.127 0.891 B_Memory LOneK1K
ENSG00000180263 FGD6 -446753 sc-eQTL 3.87e-01 -0.11 0.127 0.891 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -233019 sc-eQTL 7.07e-01 -0.0329 0.0875 0.891 B_Memory LOneK1K
ENSG00000028203 VEZT -447017 sc-eQTL 3.46e-02 -0.284 0.133 0.891 B_Naive LOneK1K
ENSG00000057704 TMCC3 120172 sc-eQTL 5.62e-01 -0.0794 0.137 0.891 B_Naive LOneK1K
ENSG00000111142 METAP2 -702791 sc-eQTL 8.55e-01 0.0206 0.112 0.891 B_Naive LOneK1K
ENSG00000120798 NR2C1 -302899 sc-eQTL 6.31e-01 -0.0704 0.146 0.891 B_Naive LOneK1K
ENSG00000136014 USP44 -780747 sc-eQTL 4.63e-01 0.0953 0.13 0.891 B_Naive LOneK1K
ENSG00000136040 PLXNC1 622152 sc-eQTL 3.20e-01 -0.11 0.111 0.891 B_Naive LOneK1K
ENSG00000173588 CEP83 310741 sc-eQTL 8.22e-02 -0.201 0.115 0.891 B_Naive LOneK1K
ENSG00000180263 FGD6 -446753 sc-eQTL 7.84e-01 0.0391 0.143 0.891 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -233019 sc-eQTL 8.93e-01 0.0107 0.0789 0.891 B_Naive LOneK1K
ENSG00000028203 VEZT -447017 sc-eQTL 7.98e-01 -0.0339 0.132 0.891 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 120172 sc-eQTL 4.42e-02 0.21 0.104 0.891 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -702791 sc-eQTL 8.28e-01 0.0247 0.113 0.891 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -302899 sc-eQTL 3.06e-01 -0.126 0.123 0.891 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 622152 sc-eQTL 9.02e-01 -0.0115 0.0929 0.891 CD14_Mono LOneK1K
ENSG00000173588 CEP83 310741 sc-eQTL 3.54e-02 -0.265 0.125 0.891 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -446753 sc-eQTL 8.05e-01 -0.0283 0.114 0.891 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -233019 sc-eQTL 6.22e-01 0.0387 0.0784 0.891 CD14_Mono LOneK1K
ENSG00000028203 VEZT -447017 sc-eQTL 6.40e-01 -0.0691 0.147 0.89 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 120172 sc-eQTL 8.21e-01 0.031 0.137 0.89 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -702791 sc-eQTL 5.26e-01 0.0856 0.135 0.89 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -302899 sc-eQTL 3.63e-01 0.138 0.151 0.89 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 622152 sc-eQTL 9.77e-01 0.00256 0.0872 0.89 CD16_Mono LOneK1K
ENSG00000173588 CEP83 310741 sc-eQTL 6.82e-01 -0.0593 0.145 0.89 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -446753 sc-eQTL 6.94e-01 0.0487 0.124 0.89 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -233019 sc-eQTL 3.12e-01 0.0997 0.0984 0.89 CD16_Mono LOneK1K
ENSG00000028203 VEZT -447017 sc-eQTL 4.52e-01 -0.1 0.133 0.89 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 120172 sc-eQTL 1.10e-01 0.198 0.123 0.89 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -702791 sc-eQTL 5.20e-01 0.0684 0.106 0.89 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -302899 sc-eQTL 3.41e-01 0.115 0.12 0.89 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 622152 sc-eQTL 3.04e-01 -0.109 0.105 0.89 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 310741 sc-eQTL 6.12e-01 0.0603 0.119 0.89 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -233019 sc-eQTL 5.70e-01 0.0496 0.0872 0.89 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000184752 NDUFA12 -233019 eQTL 0.0349 0.0581 0.0275 0.0 0.0 0.113

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000184752 NDUFA12 -233019 5.53e-06 5.82e-06 1.04e-06 3.32e-06 1.61e-06 1.93e-06 5.66e-06 1.17e-06 5.17e-06 2.44e-06 6.53e-06 3.32e-06 7.51e-06 2.39e-06 9.59e-07 3.74e-06 2.76e-06 3.52e-06 1.55e-06 1.72e-06 2.95e-06 4.86e-06 4.68e-06 1.84e-06 8.52e-06 1.74e-06 3.35e-06 1.44e-06 4.48e-06 4.3e-06 2.91e-06 4.43e-07 5.37e-07 2.1e-06 2.91e-06 1.16e-06 1.01e-06 4.5e-07 9.96e-07 8.28e-07 6.17e-07 7.35e-06 1.61e-06 2.5e-07 7.17e-07 9.55e-07 8.39e-07 6.58e-07 3.26e-07