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Genes within 1Mb (chr12:94768055:GA:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -449691 sc-eQTL 4.59e-01 0.0576 0.0777 0.31 B L1
ENSG00000057704 TMCC3 117498 sc-eQTL 9.08e-01 0.0106 0.0914 0.31 B L1
ENSG00000111142 METAP2 -705465 sc-eQTL 3.99e-01 0.0578 0.0684 0.31 B L1
ENSG00000120798 NR2C1 -305573 sc-eQTL 3.22e-01 -0.0857 0.0863 0.31 B L1
ENSG00000136014 USP44 -783421 sc-eQTL 5.20e-01 -0.0508 0.0788 0.31 B L1
ENSG00000136040 PLXNC1 619478 sc-eQTL 4.79e-01 -0.0367 0.0518 0.31 B L1
ENSG00000173588 CEP83 308067 sc-eQTL 9.12e-01 0.00721 0.0654 0.31 B L1
ENSG00000180263 FGD6 -449427 sc-eQTL 3.63e-01 0.072 0.0789 0.31 B L1
ENSG00000184752 NDUFA12 -235693 sc-eQTL 9.84e-01 -0.000747 0.0377 0.31 B L1
ENSG00000028203 VEZT -449691 sc-eQTL 9.14e-01 -0.00709 0.0653 0.31 CD4T L1
ENSG00000111142 METAP2 -705465 sc-eQTL 8.25e-01 0.0126 0.0567 0.31 CD4T L1
ENSG00000120798 NR2C1 -305573 sc-eQTL 3.69e-02 0.131 0.0625 0.31 CD4T L1
ENSG00000136014 USP44 -783421 sc-eQTL 2.26e-01 0.104 0.0859 0.31 CD4T L1
ENSG00000136040 PLXNC1 619478 sc-eQTL 9.27e-01 -0.00509 0.0555 0.31 CD4T L1
ENSG00000173588 CEP83 308067 sc-eQTL 5.07e-02 0.113 0.0576 0.31 CD4T L1
ENSG00000184752 NDUFA12 -235693 sc-eQTL 5.16e-04 0.209 0.0592 0.31 CD4T L1
ENSG00000028203 VEZT -449691 sc-eQTL 4.47e-01 0.0595 0.0781 0.31 CD8T L1
ENSG00000057704 TMCC3 117498 sc-eQTL 1.07e-01 0.0846 0.0523 0.31 CD8T L1
ENSG00000111142 METAP2 -705465 sc-eQTL 4.45e-01 0.0512 0.0668 0.31 CD8T L1
ENSG00000120798 NR2C1 -305573 sc-eQTL 9.43e-01 -0.00615 0.0852 0.31 CD8T L1
ENSG00000136014 USP44 -783421 sc-eQTL 9.09e-01 -0.00869 0.0762 0.31 CD8T L1
ENSG00000136040 PLXNC1 619478 sc-eQTL 9.78e-02 0.12 0.072 0.31 CD8T L1
ENSG00000173588 CEP83 308067 sc-eQTL 9.14e-02 -0.114 0.0672 0.31 CD8T L1
ENSG00000184752 NDUFA12 -235693 sc-eQTL 4.09e-02 0.113 0.0548 0.31 CD8T L1
ENSG00000028203 VEZT -449691 sc-eQTL 1.17e-01 -0.143 0.0909 0.315 DC L1
ENSG00000057704 TMCC3 117498 sc-eQTL 2.96e-01 0.101 0.0966 0.315 DC L1
ENSG00000111142 METAP2 -705465 sc-eQTL 3.58e-01 0.0882 0.0958 0.315 DC L1
ENSG00000120798 NR2C1 -305573 sc-eQTL 3.82e-01 0.0813 0.0928 0.315 DC L1
ENSG00000136040 PLXNC1 619478 sc-eQTL 3.25e-02 -0.185 0.0857 0.315 DC L1
ENSG00000173588 CEP83 308067 sc-eQTL 9.83e-01 0.00168 0.0772 0.315 DC L1
ENSG00000180263 FGD6 -449427 sc-eQTL 6.47e-01 0.0394 0.0859 0.315 DC L1
ENSG00000184752 NDUFA12 -235693 sc-eQTL 9.38e-03 0.187 0.0712 0.315 DC L1
ENSG00000028203 VEZT -449691 sc-eQTL 4.37e-01 -0.0657 0.0844 0.31 Mono L1
ENSG00000057704 TMCC3 117498 sc-eQTL 1.66e-01 0.091 0.0654 0.31 Mono L1
ENSG00000111142 METAP2 -705465 sc-eQTL 7.43e-01 -0.0221 0.0673 0.31 Mono L1
ENSG00000120798 NR2C1 -305573 sc-eQTL 8.08e-02 0.14 0.0796 0.31 Mono L1
ENSG00000136040 PLXNC1 619478 sc-eQTL 7.19e-02 -0.0978 0.0541 0.31 Mono L1
ENSG00000173588 CEP83 308067 sc-eQTL 3.61e-01 -0.0735 0.0803 0.31 Mono L1
ENSG00000180263 FGD6 -449427 sc-eQTL 2.82e-01 0.0771 0.0715 0.31 Mono L1
ENSG00000184752 NDUFA12 -235693 sc-eQTL 2.65e-05 0.212 0.0494 0.31 Mono L1
ENSG00000028203 VEZT -449691 sc-eQTL 3.01e-02 -0.185 0.0848 0.311 NK L1
ENSG00000057704 TMCC3 117498 sc-eQTL 7.01e-01 0.0311 0.0808 0.311 NK L1
ENSG00000111142 METAP2 -705465 sc-eQTL 5.05e-01 0.0452 0.0678 0.311 NK L1
ENSG00000120798 NR2C1 -305573 sc-eQTL 6.65e-01 -0.0348 0.0803 0.311 NK L1
ENSG00000136040 PLXNC1 619478 sc-eQTL 7.82e-01 -0.0183 0.0662 0.311 NK L1
ENSG00000173588 CEP83 308067 sc-eQTL 1.26e-01 0.115 0.0748 0.311 NK L1
ENSG00000184752 NDUFA12 -235693 sc-eQTL 1.88e-03 0.171 0.0543 0.311 NK L1
ENSG00000028203 VEZT -449691 sc-eQTL 1.39e-01 -0.139 0.0937 0.31 Other_T L1
ENSG00000057704 TMCC3 117498 sc-eQTL 8.54e-01 0.0147 0.0801 0.31 Other_T L1
ENSG00000111142 METAP2 -705465 sc-eQTL 6.51e-01 0.0331 0.0731 0.31 Other_T L1
ENSG00000120798 NR2C1 -305573 sc-eQTL 7.64e-01 -0.0274 0.0913 0.31 Other_T L1
ENSG00000136040 PLXNC1 619478 sc-eQTL 9.84e-01 -0.00151 0.0741 0.31 Other_T L1
ENSG00000173588 CEP83 308067 sc-eQTL 9.58e-01 -0.0044 0.0834 0.31 Other_T L1
ENSG00000184752 NDUFA12 -235693 sc-eQTL 2.06e-02 0.107 0.0458 0.31 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -449691 sc-eQTL 8.98e-01 -0.0132 0.103 0.324 B_Activated L2
ENSG00000057704 TMCC3 117498 sc-eQTL 8.06e-01 -0.0216 0.0879 0.324 B_Activated L2
ENSG00000111142 METAP2 -705465 sc-eQTL 4.59e-01 -0.0797 0.107 0.324 B_Activated L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 1.95e-01 0.133 0.103 0.324 B_Activated L2
ENSG00000136014 USP44 -783421 sc-eQTL 7.84e-01 -0.0216 0.0787 0.324 B_Activated L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 4.33e-01 -0.0652 0.0829 0.324 B_Activated L2
ENSG00000173588 CEP83 308067 sc-eQTL 1.75e-01 0.14 0.103 0.324 B_Activated L2
ENSG00000180263 FGD6 -449427 sc-eQTL 1.01e-01 0.119 0.0723 0.324 B_Activated L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 2.69e-01 -0.101 0.0908 0.324 B_Activated L2
ENSG00000028203 VEZT -449691 sc-eQTL 7.84e-01 0.0257 0.0936 0.311 B_Intermediate L2
ENSG00000057704 TMCC3 117498 sc-eQTL 2.05e-01 0.12 0.0944 0.311 B_Intermediate L2
ENSG00000111142 METAP2 -705465 sc-eQTL 8.44e-01 0.017 0.0865 0.311 B_Intermediate L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 7.80e-02 -0.167 0.0941 0.311 B_Intermediate L2
ENSG00000136014 USP44 -783421 sc-eQTL 9.22e-01 0.00946 0.0971 0.311 B_Intermediate L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 2.40e-01 -0.0936 0.0795 0.311 B_Intermediate L2
ENSG00000173588 CEP83 308067 sc-eQTL 1.74e-01 0.12 0.088 0.311 B_Intermediate L2
ENSG00000180263 FGD6 -449427 sc-eQTL 8.36e-01 0.018 0.0867 0.311 B_Intermediate L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 7.39e-01 0.024 0.0718 0.311 B_Intermediate L2
ENSG00000028203 VEZT -449691 sc-eQTL 9.87e-01 -0.0016 0.0983 0.312 B_Memory L2
ENSG00000057704 TMCC3 117498 sc-eQTL 9.09e-01 0.0114 0.0997 0.312 B_Memory L2
ENSG00000111142 METAP2 -705465 sc-eQTL 7.09e-01 0.0356 0.0953 0.312 B_Memory L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 2.71e-01 -0.113 0.102 0.312 B_Memory L2
ENSG00000136014 USP44 -783421 sc-eQTL 1.40e-01 0.134 0.0908 0.312 B_Memory L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 7.22e-02 0.138 0.0766 0.312 B_Memory L2
ENSG00000173588 CEP83 308067 sc-eQTL 6.70e-01 -0.0385 0.09 0.312 B_Memory L2
ENSG00000180263 FGD6 -449427 sc-eQTL 1.21e-01 0.14 0.0903 0.312 B_Memory L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 3.93e-01 0.0624 0.073 0.312 B_Memory L2
ENSG00000028203 VEZT -449691 sc-eQTL 2.26e-01 0.112 0.0924 0.31 B_Naive1 L2
ENSG00000057704 TMCC3 117498 sc-eQTL 2.27e-01 -0.113 0.0935 0.31 B_Naive1 L2
ENSG00000111142 METAP2 -705465 sc-eQTL 1.27e-02 0.195 0.0777 0.31 B_Naive1 L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 2.55e-01 0.11 0.0959 0.31 B_Naive1 L2
ENSG00000136014 USP44 -783421 sc-eQTL 1.90e-01 -0.124 0.0945 0.31 B_Naive1 L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 8.78e-01 0.0123 0.0797 0.31 B_Naive1 L2
ENSG00000173588 CEP83 308067 sc-eQTL 5.04e-01 -0.0551 0.0822 0.31 B_Naive1 L2
ENSG00000180263 FGD6 -449427 sc-eQTL 7.63e-01 0.0272 0.0902 0.31 B_Naive1 L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 4.13e-01 -0.043 0.0525 0.31 B_Naive1 L2
ENSG00000028203 VEZT -449691 sc-eQTL 6.25e-03 -0.271 0.0982 0.311 B_Naive2 L2
ENSG00000057704 TMCC3 117498 sc-eQTL 2.55e-02 0.203 0.0902 0.311 B_Naive2 L2
ENSG00000111142 METAP2 -705465 sc-eQTL 8.48e-01 -0.0178 0.0923 0.311 B_Naive2 L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 3.70e-01 -0.0905 0.101 0.311 B_Naive2 L2
ENSG00000136014 USP44 -783421 sc-eQTL 2.63e-01 -0.103 0.0921 0.311 B_Naive2 L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 3.24e-01 -0.0843 0.0852 0.311 B_Naive2 L2
ENSG00000173588 CEP83 308067 sc-eQTL 8.95e-01 -0.0119 0.0902 0.311 B_Naive2 L2
ENSG00000180263 FGD6 -449427 sc-eQTL 6.77e-01 0.0315 0.0756 0.311 B_Naive2 L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 7.32e-01 0.0255 0.0743 0.311 B_Naive2 L2
ENSG00000028203 VEZT -449691 sc-eQTL 8.58e-01 0.0173 0.096 0.311 CD4_CTL L2
ENSG00000111142 METAP2 -705465 sc-eQTL 5.16e-01 -0.0653 0.1 0.311 CD4_CTL L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 7.74e-02 0.177 0.1 0.311 CD4_CTL L2
ENSG00000136014 USP44 -783421 sc-eQTL 7.04e-01 0.0304 0.0799 0.311 CD4_CTL L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 4.44e-01 0.0688 0.0896 0.311 CD4_CTL L2
ENSG00000173588 CEP83 308067 sc-eQTL 4.78e-01 0.0651 0.0916 0.311 CD4_CTL L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 1.00e-02 0.211 0.0813 0.311 CD4_CTL L2
ENSG00000028203 VEZT -449691 sc-eQTL 9.35e-01 -0.00607 0.0742 0.31 CD4_Naive L2
ENSG00000111142 METAP2 -705465 sc-eQTL 6.45e-01 0.0297 0.0643 0.31 CD4_Naive L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 7.94e-02 0.137 0.0779 0.31 CD4_Naive L2
ENSG00000136014 USP44 -783421 sc-eQTL 3.34e-01 0.0873 0.0902 0.31 CD4_Naive L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 6.95e-01 -0.0241 0.0615 0.31 CD4_Naive L2
ENSG00000173588 CEP83 308067 sc-eQTL 3.93e-01 0.0569 0.0665 0.31 CD4_Naive L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 2.38e-03 0.172 0.0559 0.31 CD4_Naive L2
ENSG00000028203 VEZT -449691 sc-eQTL 9.90e-01 -0.000947 0.0793 0.31 CD4_TCM L2
ENSG00000111142 METAP2 -705465 sc-eQTL 9.85e-01 0.00143 0.0743 0.31 CD4_TCM L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 2.41e-01 0.101 0.0862 0.31 CD4_TCM L2
ENSG00000136014 USP44 -783421 sc-eQTL 5.17e-01 0.0653 0.101 0.31 CD4_TCM L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 7.35e-01 0.0251 0.074 0.31 CD4_TCM L2
ENSG00000173588 CEP83 308067 sc-eQTL 2.54e-01 0.0901 0.0787 0.31 CD4_TCM L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 5.48e-04 0.232 0.0661 0.31 CD4_TCM L2
ENSG00000028203 VEZT -449691 sc-eQTL 6.67e-01 0.0435 0.101 0.31 CD4_TEM L2
ENSG00000111142 METAP2 -705465 sc-eQTL 6.67e-01 0.0386 0.0896 0.31 CD4_TEM L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 4.61e-01 0.0695 0.094 0.31 CD4_TEM L2
ENSG00000136014 USP44 -783421 sc-eQTL 1.09e-01 0.152 0.094 0.31 CD4_TEM L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 2.42e-01 0.0945 0.0805 0.31 CD4_TEM L2
ENSG00000173588 CEP83 308067 sc-eQTL 2.83e-01 0.0974 0.0905 0.31 CD4_TEM L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 4.66e-03 0.23 0.0804 0.31 CD4_TEM L2
ENSG00000028203 VEZT -449691 sc-eQTL 9.85e-01 -0.00163 0.0876 0.31 CD8_CTL L2
ENSG00000057704 TMCC3 117498 sc-eQTL 4.98e-02 0.151 0.0765 0.31 CD8_CTL L2
ENSG00000111142 METAP2 -705465 sc-eQTL 3.54e-01 -0.0812 0.0874 0.31 CD8_CTL L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 3.77e-01 -0.0857 0.0967 0.31 CD8_CTL L2
ENSG00000136014 USP44 -783421 sc-eQTL 9.22e-01 -0.00913 0.0928 0.31 CD8_CTL L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 1.85e-02 0.186 0.0782 0.31 CD8_CTL L2
ENSG00000173588 CEP83 308067 sc-eQTL 9.08e-01 0.0101 0.0872 0.31 CD8_CTL L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 2.25e-01 0.0833 0.0684 0.31 CD8_CTL L2
ENSG00000028203 VEZT -449691 sc-eQTL 4.77e-01 -0.0647 0.0908 0.31 CD8_Naive L2
ENSG00000057704 TMCC3 117498 sc-eQTL 8.06e-02 0.124 0.0705 0.31 CD8_Naive L2
ENSG00000111142 METAP2 -705465 sc-eQTL 1.05e-01 0.133 0.0817 0.31 CD8_Naive L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 7.24e-01 -0.0323 0.0912 0.31 CD8_Naive L2
ENSG00000136014 USP44 -783421 sc-eQTL 6.59e-01 0.0364 0.0823 0.31 CD8_Naive L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 9.15e-01 0.0089 0.0833 0.31 CD8_Naive L2
ENSG00000173588 CEP83 308067 sc-eQTL 3.59e-02 -0.168 0.0795 0.31 CD8_Naive L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 2.24e-01 0.0809 0.0663 0.31 CD8_Naive L2
ENSG00000028203 VEZT -449691 sc-eQTL 5.58e-01 0.0575 0.0981 0.317 CD8_TCM L2
ENSG00000057704 TMCC3 117498 sc-eQTL 1.72e-01 0.103 0.0753 0.317 CD8_TCM L2
ENSG00000111142 METAP2 -705465 sc-eQTL 1.93e-01 0.129 0.0991 0.317 CD8_TCM L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 3.86e-01 -0.0869 0.1 0.317 CD8_TCM L2
ENSG00000136014 USP44 -783421 sc-eQTL 4.50e-01 0.0679 0.0898 0.317 CD8_TCM L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 7.85e-01 -0.0258 0.0948 0.317 CD8_TCM L2
ENSG00000173588 CEP83 308067 sc-eQTL 4.87e-01 0.0677 0.0972 0.317 CD8_TCM L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 5.60e-01 0.0456 0.0782 0.317 CD8_TCM L2
ENSG00000028203 VEZT -449691 sc-eQTL 5.38e-01 -0.061 0.099 0.306 CD8_TEM L2
ENSG00000057704 TMCC3 117498 sc-eQTL 1.40e-01 0.126 0.0847 0.306 CD8_TEM L2
ENSG00000111142 METAP2 -705465 sc-eQTL 1.32e-01 0.145 0.0956 0.306 CD8_TEM L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 9.53e-01 0.00598 0.101 0.306 CD8_TEM L2
ENSG00000136014 USP44 -783421 sc-eQTL 9.64e-01 -0.00382 0.0839 0.306 CD8_TEM L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 9.50e-01 0.00605 0.0956 0.306 CD8_TEM L2
ENSG00000173588 CEP83 308067 sc-eQTL 5.92e-01 -0.0529 0.0986 0.306 CD8_TEM L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 6.46e-01 0.0388 0.0842 0.306 CD8_TEM L2
ENSG00000028203 VEZT -449691 sc-eQTL 7.97e-02 -0.172 0.0978 0.312 MAIT L2
ENSG00000057704 TMCC3 117498 sc-eQTL 6.71e-01 0.0355 0.0833 0.312 MAIT L2
ENSG00000111142 METAP2 -705465 sc-eQTL 1.68e-01 0.132 0.0953 0.312 MAIT L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 4.01e-01 -0.0781 0.0927 0.312 MAIT L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 2.92e-01 -0.086 0.0815 0.312 MAIT L2
ENSG00000173588 CEP83 308067 sc-eQTL 2.87e-01 -0.0995 0.0933 0.312 MAIT L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 9.25e-02 0.137 0.0812 0.312 MAIT L2
ENSG00000028203 VEZT -449691 sc-eQTL 9.34e-02 -0.17 0.101 0.307 NK_CD56bright L2
ENSG00000057704 TMCC3 117498 sc-eQTL 6.64e-01 0.0423 0.0972 0.307 NK_CD56bright L2
ENSG00000111142 METAP2 -705465 sc-eQTL 5.31e-01 0.0627 0.0998 0.307 NK_CD56bright L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 2.32e-01 -0.125 0.105 0.307 NK_CD56bright L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 2.77e-01 0.0935 0.0857 0.307 NK_CD56bright L2
ENSG00000173588 CEP83 308067 sc-eQTL 7.32e-01 0.0298 0.0871 0.307 NK_CD56bright L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 2.10e-01 0.105 0.0831 0.307 NK_CD56bright L2
ENSG00000028203 VEZT -449691 sc-eQTL 1.40e-01 -0.142 0.0958 0.31 NK_CD56dim L2
ENSG00000057704 TMCC3 117498 sc-eQTL 4.52e-01 0.063 0.0837 0.31 NK_CD56dim L2
ENSG00000111142 METAP2 -705465 sc-eQTL 2.94e-01 0.0912 0.0867 0.31 NK_CD56dim L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 7.75e-01 0.0253 0.0885 0.31 NK_CD56dim L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 9.44e-01 0.00552 0.0778 0.31 NK_CD56dim L2
ENSG00000173588 CEP83 308067 sc-eQTL 1.55e-02 0.216 0.0886 0.31 NK_CD56dim L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 2.72e-04 0.225 0.0607 0.31 NK_CD56dim L2
ENSG00000028203 VEZT -449691 sc-eQTL 2.30e-01 -0.126 0.105 0.306 NK_HLA L2
ENSG00000057704 TMCC3 117498 sc-eQTL 7.64e-01 -0.028 0.0932 0.306 NK_HLA L2
ENSG00000111142 METAP2 -705465 sc-eQTL 3.52e-01 -0.0912 0.0978 0.306 NK_HLA L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 9.66e-01 0.00435 0.103 0.306 NK_HLA L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 5.98e-01 0.0446 0.0844 0.306 NK_HLA L2
ENSG00000173588 CEP83 308067 sc-eQTL 9.33e-03 -0.25 0.0953 0.306 NK_HLA L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 1.01e-01 0.143 0.0867 0.306 NK_HLA L2
ENSG00000028203 VEZT -449691 sc-eQTL 3.00e-01 -0.0915 0.0882 0.31 NK_cytokine L2
ENSG00000057704 TMCC3 117498 sc-eQTL 7.07e-01 -0.0342 0.0906 0.31 NK_cytokine L2
ENSG00000111142 METAP2 -705465 sc-eQTL 3.00e-01 0.093 0.0895 0.31 NK_cytokine L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 9.68e-01 -0.00367 0.0929 0.31 NK_cytokine L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 2.14e-01 -0.0998 0.0801 0.31 NK_cytokine L2
ENSG00000173588 CEP83 308067 sc-eQTL 5.05e-01 0.0615 0.0922 0.31 NK_cytokine L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 3.40e-01 0.0614 0.0642 0.31 NK_cytokine L2
ENSG00000028203 VEZT -449691 sc-eQTL 5.54e-01 0.0731 0.123 0.296 PB L2
ENSG00000057704 TMCC3 117498 sc-eQTL 4.55e-01 -0.0831 0.111 0.296 PB L2
ENSG00000111142 METAP2 -705465 sc-eQTL 2.71e-01 -0.135 0.122 0.296 PB L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 5.06e-01 -0.0779 0.117 0.296 PB L2
ENSG00000136014 USP44 -783421 sc-eQTL 8.57e-01 -0.0198 0.11 0.296 PB L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 5.38e-01 -0.0701 0.114 0.296 PB L2
ENSG00000173588 CEP83 308067 sc-eQTL 7.54e-01 0.0372 0.118 0.296 PB L2
ENSG00000180263 FGD6 -449427 sc-eQTL 6.80e-01 0.0406 0.0983 0.296 PB L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 3.11e-01 0.07 0.0688 0.296 PB L2
ENSG00000028203 VEZT -449691 sc-eQTL 9.28e-02 -0.157 0.0927 0.307 Pro_T L2
ENSG00000057704 TMCC3 117498 sc-eQTL 9.37e-01 -0.00656 0.0832 0.307 Pro_T L2
ENSG00000111142 METAP2 -705465 sc-eQTL 8.77e-01 -0.0124 0.0801 0.307 Pro_T L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 1.55e-01 0.137 0.0961 0.307 Pro_T L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 1.89e-01 0.124 0.0942 0.307 Pro_T L2
ENSG00000173588 CEP83 308067 sc-eQTL 3.81e-01 -0.0821 0.0935 0.307 Pro_T L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 6.73e-01 -0.0248 0.0585 0.307 Pro_T L2
ENSG00000028203 VEZT -449691 sc-eQTL 8.02e-01 -0.024 0.0956 0.31 Treg L2
ENSG00000111142 METAP2 -705465 sc-eQTL 3.48e-01 -0.0847 0.09 0.31 Treg L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 5.65e-01 0.055 0.0954 0.31 Treg L2
ENSG00000136014 USP44 -783421 sc-eQTL 5.61e-01 0.0497 0.0854 0.31 Treg L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 1.01e-01 -0.144 0.0875 0.31 Treg L2
ENSG00000173588 CEP83 308067 sc-eQTL 4.58e-01 0.07 0.0941 0.31 Treg L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 8.43e-02 0.124 0.0717 0.31 Treg L2
ENSG00000028203 VEZT -449691 sc-eQTL 5.72e-03 -0.256 0.0914 0.317 cDC L2
ENSG00000057704 TMCC3 117498 sc-eQTL 5.88e-01 0.0545 0.101 0.317 cDC L2
ENSG00000111142 METAP2 -705465 sc-eQTL 3.46e-01 0.0965 0.102 0.317 cDC L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 3.80e-01 0.0864 0.0983 0.317 cDC L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 3.22e-01 -0.0871 0.0876 0.317 cDC L2
ENSG00000173588 CEP83 308067 sc-eQTL 8.16e-01 0.0192 0.0824 0.317 cDC L2
ENSG00000180263 FGD6 -449427 sc-eQTL 9.05e-01 0.0113 0.0947 0.317 cDC L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 1.16e-02 0.202 0.0791 0.317 cDC L2
ENSG00000028203 VEZT -449691 sc-eQTL 9.79e-01 -0.00247 0.0936 0.31 cMono_IL1B L2
ENSG00000057704 TMCC3 117498 sc-eQTL 1.22e-01 0.114 0.0732 0.31 cMono_IL1B L2
ENSG00000111142 METAP2 -705465 sc-eQTL 5.02e-01 0.0543 0.0807 0.31 cMono_IL1B L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 2.47e-01 0.0986 0.0849 0.31 cMono_IL1B L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 1.39e-01 -0.0959 0.0646 0.31 cMono_IL1B L2
ENSG00000173588 CEP83 308067 sc-eQTL 1.29e-01 -0.134 0.088 0.31 cMono_IL1B L2
ENSG00000180263 FGD6 -449427 sc-eQTL 2.52e-01 0.0864 0.0753 0.31 cMono_IL1B L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 3.29e-04 0.19 0.052 0.31 cMono_IL1B L2
ENSG00000028203 VEZT -449691 sc-eQTL 7.06e-01 0.0359 0.0949 0.31 cMono_S100A L2
ENSG00000057704 TMCC3 117498 sc-eQTL 1.74e-01 0.113 0.0828 0.31 cMono_S100A L2
ENSG00000111142 METAP2 -705465 sc-eQTL 4.60e-01 -0.0679 0.0917 0.31 cMono_S100A L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 2.09e-01 0.113 0.0901 0.31 cMono_S100A L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 2.45e-02 -0.152 0.067 0.31 cMono_S100A L2
ENSG00000173588 CEP83 308067 sc-eQTL 1.92e-01 0.125 0.0955 0.31 cMono_S100A L2
ENSG00000180263 FGD6 -449427 sc-eQTL 4.49e-01 -0.0664 0.0877 0.31 cMono_S100A L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 1.73e-03 0.194 0.061 0.31 cMono_S100A L2
ENSG00000028203 VEZT -449691 sc-eQTL 5.00e-01 0.0801 0.118 0.318 gdT L2
ENSG00000057704 TMCC3 117498 sc-eQTL 8.52e-01 -0.0169 0.0908 0.318 gdT L2
ENSG00000111142 METAP2 -705465 sc-eQTL 1.07e-01 -0.181 0.112 0.318 gdT L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 5.27e-01 0.0763 0.12 0.318 gdT L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 9.20e-01 -0.0116 0.114 0.318 gdT L2
ENSG00000173588 CEP83 308067 sc-eQTL 5.92e-01 0.06 0.112 0.318 gdT L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 5.04e-01 -0.065 0.097 0.318 gdT L2
ENSG00000028203 VEZT -449691 sc-eQTL 3.47e-01 -0.0954 0.101 0.313 intMono L2
ENSG00000057704 TMCC3 117498 sc-eQTL 8.36e-01 -0.0203 0.0982 0.313 intMono L2
ENSG00000111142 METAP2 -705465 sc-eQTL 8.01e-01 0.026 0.103 0.313 intMono L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 9.81e-01 0.00228 0.0963 0.313 intMono L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 1.33e-01 -0.124 0.0824 0.313 intMono L2
ENSG00000173588 CEP83 308067 sc-eQTL 2.49e-01 -0.115 0.0995 0.313 intMono L2
ENSG00000180263 FGD6 -449427 sc-eQTL 1.27e-02 0.222 0.0883 0.313 intMono L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 6.54e-02 0.118 0.0635 0.313 intMono L2
ENSG00000028203 VEZT -449691 sc-eQTL 7.86e-01 -0.026 0.0956 0.31 ncMono L2
ENSG00000057704 TMCC3 117498 sc-eQTL 6.93e-01 0.0365 0.0922 0.31 ncMono L2
ENSG00000111142 METAP2 -705465 sc-eQTL 9.39e-01 -0.00773 0.1 0.31 ncMono L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 2.20e-01 0.122 0.0993 0.31 ncMono L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 5.97e-01 0.0336 0.0635 0.31 ncMono L2
ENSG00000173588 CEP83 308067 sc-eQTL 9.37e-01 -0.0078 0.0994 0.31 ncMono L2
ENSG00000180263 FGD6 -449427 sc-eQTL 3.03e-01 0.0973 0.0942 0.31 ncMono L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 2.65e-02 0.185 0.0829 0.31 ncMono L2
ENSG00000028203 VEZT -449691 sc-eQTL 1.74e-01 0.142 0.104 0.333 pDC L2
ENSG00000057704 TMCC3 117498 sc-eQTL 3.91e-01 0.0871 0.101 0.333 pDC L2
ENSG00000111142 METAP2 -705465 sc-eQTL 4.90e-01 0.0735 0.106 0.333 pDC L2
ENSG00000120798 NR2C1 -305573 sc-eQTL 2.20e-02 0.239 0.103 0.333 pDC L2
ENSG00000136040 PLXNC1 619478 sc-eQTL 5.31e-01 -0.0634 0.101 0.333 pDC L2
ENSG00000173588 CEP83 308067 sc-eQTL 5.71e-01 -0.0617 0.109 0.333 pDC L2
ENSG00000180263 FGD6 -449427 sc-eQTL 5.27e-01 0.0579 0.0913 0.333 pDC L2
ENSG00000184752 NDUFA12 -235693 sc-eQTL 5.27e-01 0.0571 0.09 0.333 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -449691 sc-eQTL 5.31e-01 0.0596 0.095 0.31 B_Memory LOneK1K
ENSG00000057704 TMCC3 117498 sc-eQTL 4.95e-01 0.0684 0.1 0.31 B_Memory LOneK1K
ENSG00000111142 METAP2 -705465 sc-eQTL 8.80e-01 0.0134 0.0885 0.31 B_Memory LOneK1K
ENSG00000120798 NR2C1 -305573 sc-eQTL 1.43e-01 -0.149 0.101 0.31 B_Memory LOneK1K
ENSG00000136014 USP44 -783421 sc-eQTL 8.01e-01 0.0238 0.0942 0.31 B_Memory LOneK1K
ENSG00000136040 PLXNC1 619478 sc-eQTL 6.33e-01 -0.029 0.0607 0.31 B_Memory LOneK1K
ENSG00000173588 CEP83 308067 sc-eQTL 3.78e-01 0.0747 0.0846 0.31 B_Memory LOneK1K
ENSG00000180263 FGD6 -449427 sc-eQTL 1.81e-01 0.113 0.0839 0.31 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -235693 sc-eQTL 5.41e-01 0.0356 0.0581 0.31 B_Memory LOneK1K
ENSG00000028203 VEZT -449691 sc-eQTL 8.03e-01 -0.022 0.0881 0.31 B_Naive LOneK1K
ENSG00000057704 TMCC3 117498 sc-eQTL 9.00e-01 0.0113 0.0894 0.31 B_Naive LOneK1K
ENSG00000111142 METAP2 -705465 sc-eQTL 8.17e-02 0.128 0.073 0.31 B_Naive LOneK1K
ENSG00000120798 NR2C1 -305573 sc-eQTL 9.96e-01 -0.000512 0.0956 0.31 B_Naive LOneK1K
ENSG00000136014 USP44 -783421 sc-eQTL 1.82e-01 -0.113 0.0845 0.31 B_Naive LOneK1K
ENSG00000136040 PLXNC1 619478 sc-eQTL 8.02e-01 -0.0182 0.0725 0.31 B_Naive LOneK1K
ENSG00000173588 CEP83 308067 sc-eQTL 4.89e-01 -0.0523 0.0755 0.31 B_Naive LOneK1K
ENSG00000180263 FGD6 -449427 sc-eQTL 4.84e-01 0.0652 0.0931 0.31 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -235693 sc-eQTL 6.50e-01 -0.0234 0.0515 0.31 B_Naive LOneK1K
ENSG00000028203 VEZT -449691 sc-eQTL 7.28e-01 -0.0299 0.0859 0.31 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 117498 sc-eQTL 6.16e-02 0.127 0.0675 0.31 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -705465 sc-eQTL 8.03e-01 -0.0184 0.0735 0.31 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -305573 sc-eQTL 1.02e-01 0.131 0.0794 0.31 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 619478 sc-eQTL 5.28e-02 -0.117 0.0598 0.31 CD14_Mono LOneK1K
ENSG00000173588 CEP83 308067 sc-eQTL 5.23e-01 -0.0525 0.0822 0.31 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -449427 sc-eQTL 3.63e-01 0.0676 0.0741 0.31 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -235693 sc-eQTL 3.72e-05 0.206 0.049 0.31 CD14_Mono LOneK1K
ENSG00000028203 VEZT -449691 sc-eQTL 1.28e-01 -0.146 0.0952 0.312 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 117498 sc-eQTL 9.26e-01 -0.00823 0.0888 0.312 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -705465 sc-eQTL 8.33e-01 -0.0186 0.0877 0.312 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -305573 sc-eQTL 3.68e-01 0.0885 0.098 0.312 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 619478 sc-eQTL 8.65e-01 -0.00967 0.0567 0.312 CD16_Mono LOneK1K
ENSG00000173588 CEP83 308067 sc-eQTL 2.24e-01 -0.114 0.0938 0.312 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -449427 sc-eQTL 9.32e-03 0.208 0.0791 0.312 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -235693 sc-eQTL 3.13e-02 0.137 0.0634 0.312 CD16_Mono LOneK1K
ENSG00000028203 VEZT -449691 sc-eQTL 4.00e-02 -0.181 0.0874 0.31 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 117498 sc-eQTL 5.61e-01 0.0479 0.0824 0.31 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -705465 sc-eQTL 4.84e-01 0.0494 0.0704 0.31 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -305573 sc-eQTL 5.65e-01 0.046 0.0799 0.31 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 619478 sc-eQTL 4.28e-01 -0.0555 0.07 0.31 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 308067 sc-eQTL 8.54e-02 0.135 0.0783 0.31 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -235693 sc-eQTL 2.06e-03 0.177 0.0566 0.31 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111142 METAP2 -705465 eQTL 0.0311 -0.022 0.0102 0.0 0.0 0.267
ENSG00000180263 FGD6 -449427 eQTL 6.1e-06 0.0996 0.0219 0.00245 0.002 0.267
ENSG00000184752 NDUFA12 -235693 eQTL 9.09e-15 0.156 0.0198 0.00352 0.00122 0.267

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000180263 FGD6 -449427 4.21e-07 1.11e-07 3.54e-08 1.67e-07 1.03e-07 9.57e-08 1.36e-07 5.29e-08 1.32e-07 3.99e-08 1.61e-07 7.49e-08 1.2e-07 6.07e-08 4.77e-08 7.76e-08 5.15e-08 1.06e-07 5.12e-08 2.93e-08 1.04e-07 1.31e-07 1.31e-07 5.23e-08 1.33e-07 1.03e-07 1.12e-07 8.27e-08 1.05e-07 1.09e-07 9.5e-08 3.29e-08 2.6e-08 8e-08 1.01e-07 4.23e-08 4.01e-08 8e-08 8.39e-08 3.96e-08 2.71e-08 1.39e-07 4.51e-08 0.0 1.15e-07 1.86e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000184752 NDUFA12 -235693 4.49e-06 2.4e-07 1.54e-07 2.05e-07 9.65e-08 3.36e-07 2.16e-07 5.24e-08 1.5e-07 4.4e-08 1.76e-07 8.59e-08 1.69e-07 9.18e-08 7.79e-08 7.74e-08 4.12e-08 1.8e-07 5.75e-08 3.88e-08 1.08e-07 1.89e-07 1.73e-07 4.54e-08 1.5e-07 1.19e-07 1.07e-07 9.32e-08 1.31e-07 1e-07 1.07e-07 3.29e-08 2.74e-08 8.89e-08 7.66e-08 3.99e-08 4.99e-08 8.78e-08 8.14e-08 3.8e-08 3.46e-08 2.41e-07 5.08e-08 1.11e-08 1.09e-07 1.69e-08 1.27e-07 4.82e-09 4.72e-08
ENSG00000236349 \N 219814 5.03e-06 3.23e-07 2.41e-07 2.26e-07 9.02e-08 4.59e-07 2.74e-07 5.21e-08 1.71e-07 4.57e-08 2.07e-07 9e-08 2.05e-07 1.1e-07 1.24e-07 8.08e-08 4.45e-08 2.33e-07 6.32e-08 4.03e-08 1.19e-07 2.15e-07 2.04e-07 4.13e-08 1.65e-07 1.16e-07 1.1e-07 9.57e-08 1.34e-07 1.06e-07 1.21e-07 3.29e-08 2.91e-08 9.52e-08 5.99e-08 3.76e-08 4.85e-08 9.06e-08 8.22e-08 3.74e-08 3.89e-08 3.06e-07 3.99e-08 1.25e-08 1.09e-07 1.67e-08 1.24e-07 4.82e-09 4.61e-08