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Genes within 1Mb (chr12:94755029:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -462717 sc-eQTL 5.42e-01 0.0462 0.0756 0.355 B L1
ENSG00000057704 TMCC3 104472 sc-eQTL 1.30e-01 0.134 0.0884 0.355 B L1
ENSG00000111142 METAP2 -718491 sc-eQTL 7.17e-01 0.0242 0.0665 0.355 B L1
ENSG00000120798 NR2C1 -318599 sc-eQTL 4.88e-01 -0.0583 0.084 0.355 B L1
ENSG00000136014 USP44 -796447 sc-eQTL 8.77e-01 -0.0119 0.0767 0.355 B L1
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.95e-01 0.000311 0.0504 0.355 B L1
ENSG00000173588 CEP83 295041 sc-eQTL 7.22e-01 -0.0226 0.0636 0.355 B L1
ENSG00000180263 FGD6 -462453 sc-eQTL 4.47e-01 -0.0585 0.0768 0.355 B L1
ENSG00000184752 NDUFA12 -248719 sc-eQTL 7.16e-01 0.0134 0.0367 0.355 B L1
ENSG00000028203 VEZT -462717 sc-eQTL 5.61e-01 -0.0363 0.0624 0.355 CD4T L1
ENSG00000111142 METAP2 -718491 sc-eQTL 3.30e-01 0.0528 0.0541 0.355 CD4T L1
ENSG00000120798 NR2C1 -318599 sc-eQTL 1.38e-01 0.0894 0.06 0.355 CD4T L1
ENSG00000136014 USP44 -796447 sc-eQTL 4.80e-01 0.0582 0.0823 0.355 CD4T L1
ENSG00000136040 PLXNC1 606452 sc-eQTL 4.01e-01 -0.0446 0.0529 0.355 CD4T L1
ENSG00000173588 CEP83 295041 sc-eQTL 3.95e-01 0.0473 0.0554 0.355 CD4T L1
ENSG00000184752 NDUFA12 -248719 sc-eQTL 5.41e-02 0.112 0.0577 0.355 CD4T L1
ENSG00000028203 VEZT -462717 sc-eQTL 6.33e-01 0.036 0.0753 0.355 CD8T L1
ENSG00000057704 TMCC3 104472 sc-eQTL 5.11e-01 0.0333 0.0506 0.355 CD8T L1
ENSG00000111142 METAP2 -718491 sc-eQTL 5.61e-02 0.123 0.0639 0.355 CD8T L1
ENSG00000120798 NR2C1 -318599 sc-eQTL 6.01e-01 0.043 0.082 0.355 CD8T L1
ENSG00000136014 USP44 -796447 sc-eQTL 5.59e-01 0.043 0.0734 0.355 CD8T L1
ENSG00000136040 PLXNC1 606452 sc-eQTL 4.81e-01 0.0493 0.0697 0.355 CD8T L1
ENSG00000173588 CEP83 295041 sc-eQTL 1.98e-01 -0.0839 0.0649 0.355 CD8T L1
ENSG00000184752 NDUFA12 -248719 sc-eQTL 5.94e-01 0.0285 0.0533 0.355 CD8T L1
ENSG00000028203 VEZT -462717 sc-eQTL 1.70e-01 -0.123 0.0896 0.356 DC L1
ENSG00000057704 TMCC3 104472 sc-eQTL 5.70e-01 0.0542 0.0953 0.356 DC L1
ENSG00000111142 METAP2 -718491 sc-eQTL 3.94e-01 0.0806 0.0943 0.356 DC L1
ENSG00000120798 NR2C1 -318599 sc-eQTL 6.95e-01 0.0359 0.0915 0.356 DC L1
ENSG00000136040 PLXNC1 606452 sc-eQTL 5.06e-01 -0.0568 0.0853 0.356 DC L1
ENSG00000173588 CEP83 295041 sc-eQTL 4.61e-01 -0.0561 0.076 0.356 DC L1
ENSG00000180263 FGD6 -462453 sc-eQTL 6.97e-01 -0.033 0.0846 0.356 DC L1
ENSG00000184752 NDUFA12 -248719 sc-eQTL 3.31e-01 0.0694 0.0711 0.356 DC L1
ENSG00000028203 VEZT -462717 sc-eQTL 1.87e-01 -0.109 0.0825 0.355 Mono L1
ENSG00000057704 TMCC3 104472 sc-eQTL 5.68e-02 0.122 0.0638 0.355 Mono L1
ENSG00000111142 METAP2 -718491 sc-eQTL 2.13e-02 -0.151 0.0651 0.355 Mono L1
ENSG00000120798 NR2C1 -318599 sc-eQTL 3.59e-01 -0.0721 0.0785 0.355 Mono L1
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.47e-01 -0.00353 0.0534 0.355 Mono L1
ENSG00000173588 CEP83 295041 sc-eQTL 2.04e-01 -0.1 0.0786 0.355 Mono L1
ENSG00000180263 FGD6 -462453 sc-eQTL 4.95e-01 0.048 0.0702 0.355 Mono L1
ENSG00000184752 NDUFA12 -248719 sc-eQTL 1.09e-01 0.0808 0.0502 0.355 Mono L1
ENSG00000028203 VEZT -462717 sc-eQTL 5.48e-01 -0.0498 0.0828 0.356 NK L1
ENSG00000057704 TMCC3 104472 sc-eQTL 7.60e-01 0.0239 0.0782 0.356 NK L1
ENSG00000111142 METAP2 -718491 sc-eQTL 1.15e-01 0.103 0.0652 0.356 NK L1
ENSG00000120798 NR2C1 -318599 sc-eQTL 7.14e-01 -0.0285 0.0777 0.356 NK L1
ENSG00000136040 PLXNC1 606452 sc-eQTL 8.05e-01 0.0158 0.064 0.356 NK L1
ENSG00000173588 CEP83 295041 sc-eQTL 7.71e-02 0.128 0.0722 0.356 NK L1
ENSG00000184752 NDUFA12 -248719 sc-eQTL 7.35e-02 0.0958 0.0533 0.356 NK L1
ENSG00000028203 VEZT -462717 sc-eQTL 4.16e-01 -0.0744 0.0913 0.355 Other_T L1
ENSG00000057704 TMCC3 104472 sc-eQTL 7.52e-01 0.0246 0.0778 0.355 Other_T L1
ENSG00000111142 METAP2 -718491 sc-eQTL 8.48e-01 0.0137 0.0711 0.355 Other_T L1
ENSG00000120798 NR2C1 -318599 sc-eQTL 9.92e-01 -0.000905 0.0887 0.355 Other_T L1
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.40e-01 -0.00546 0.072 0.355 Other_T L1
ENSG00000173588 CEP83 295041 sc-eQTL 8.70e-01 0.0132 0.081 0.355 Other_T L1
ENSG00000184752 NDUFA12 -248719 sc-eQTL 3.33e-02 0.0956 0.0446 0.355 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -462717 sc-eQTL 7.03e-01 0.038 0.0996 0.367 B_Activated L2
ENSG00000057704 TMCC3 104472 sc-eQTL 7.41e-01 0.0282 0.085 0.367 B_Activated L2
ENSG00000111142 METAP2 -718491 sc-eQTL 5.80e-01 -0.0575 0.104 0.367 B_Activated L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 2.68e-01 0.11 0.0993 0.367 B_Activated L2
ENSG00000136014 USP44 -796447 sc-eQTL 3.96e-01 -0.0645 0.0759 0.367 B_Activated L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.10e-01 0.00908 0.0803 0.367 B_Activated L2
ENSG00000173588 CEP83 295041 sc-eQTL 3.28e-02 0.212 0.0986 0.367 B_Activated L2
ENSG00000180263 FGD6 -462453 sc-eQTL 1.37e-01 0.105 0.07 0.367 B_Activated L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 5.59e-03 -0.242 0.0862 0.367 B_Activated L2
ENSG00000028203 VEZT -462717 sc-eQTL 7.80e-02 0.161 0.0909 0.356 B_Intermediate L2
ENSG00000057704 TMCC3 104472 sc-eQTL 8.27e-03 0.243 0.0911 0.356 B_Intermediate L2
ENSG00000111142 METAP2 -718491 sc-eQTL 2.73e-01 -0.0928 0.0843 0.356 B_Intermediate L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 2.63e-01 -0.104 0.0924 0.356 B_Intermediate L2
ENSG00000136014 USP44 -796447 sc-eQTL 3.60e-01 -0.0869 0.0948 0.356 B_Intermediate L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 3.81e-01 -0.0684 0.0779 0.356 B_Intermediate L2
ENSG00000173588 CEP83 295041 sc-eQTL 4.84e-01 -0.0606 0.0863 0.356 B_Intermediate L2
ENSG00000180263 FGD6 -462453 sc-eQTL 3.90e-01 -0.073 0.0847 0.356 B_Intermediate L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 8.22e-01 -0.0158 0.0702 0.356 B_Intermediate L2
ENSG00000028203 VEZT -462717 sc-eQTL 7.48e-01 0.0307 0.0953 0.358 B_Memory L2
ENSG00000057704 TMCC3 104472 sc-eQTL 8.89e-01 -0.0135 0.0967 0.358 B_Memory L2
ENSG00000111142 METAP2 -718491 sc-eQTL 7.99e-01 0.0236 0.0924 0.358 B_Memory L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 1.82e-03 -0.307 0.0971 0.358 B_Memory L2
ENSG00000136014 USP44 -796447 sc-eQTL 3.24e-02 0.189 0.0876 0.358 B_Memory L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 2.11e-01 0.0936 0.0746 0.358 B_Memory L2
ENSG00000173588 CEP83 295041 sc-eQTL 5.51e-01 -0.0522 0.0872 0.358 B_Memory L2
ENSG00000180263 FGD6 -462453 sc-eQTL 9.21e-01 0.00879 0.0881 0.358 B_Memory L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 3.86e-01 0.0615 0.0707 0.358 B_Memory L2
ENSG00000028203 VEZT -462717 sc-eQTL 3.80e-01 -0.0791 0.0899 0.355 B_Naive1 L2
ENSG00000057704 TMCC3 104472 sc-eQTL 7.04e-01 -0.0347 0.091 0.355 B_Naive1 L2
ENSG00000111142 METAP2 -718491 sc-eQTL 5.09e-02 0.149 0.0759 0.355 B_Naive1 L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 3.06e-01 0.0957 0.0932 0.355 B_Naive1 L2
ENSG00000136014 USP44 -796447 sc-eQTL 6.87e-01 -0.0372 0.0921 0.355 B_Naive1 L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 5.92e-01 -0.0415 0.0773 0.355 B_Naive1 L2
ENSG00000173588 CEP83 295041 sc-eQTL 2.30e-01 -0.0958 0.0797 0.355 B_Naive1 L2
ENSG00000180263 FGD6 -462453 sc-eQTL 8.43e-01 -0.0174 0.0876 0.355 B_Naive1 L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 8.92e-01 -0.00696 0.051 0.355 B_Naive1 L2
ENSG00000028203 VEZT -462717 sc-eQTL 1.97e-01 -0.125 0.0965 0.356 B_Naive2 L2
ENSG00000057704 TMCC3 104472 sc-eQTL 9.83e-02 0.146 0.088 0.356 B_Naive2 L2
ENSG00000111142 METAP2 -718491 sc-eQTL 7.94e-01 -0.0234 0.0895 0.356 B_Naive2 L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 7.59e-01 -0.0301 0.098 0.356 B_Naive2 L2
ENSG00000136014 USP44 -796447 sc-eQTL 8.50e-01 -0.0169 0.0895 0.356 B_Naive2 L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.32e-01 0.00709 0.0829 0.356 B_Naive2 L2
ENSG00000173588 CEP83 295041 sc-eQTL 5.19e-01 0.0564 0.0874 0.356 B_Naive2 L2
ENSG00000180263 FGD6 -462453 sc-eQTL 5.75e-01 0.0412 0.0733 0.356 B_Naive2 L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 5.93e-01 0.0385 0.072 0.356 B_Naive2 L2
ENSG00000028203 VEZT -462717 sc-eQTL 6.93e-01 -0.0378 0.0955 0.35 CD4_CTL L2
ENSG00000111142 METAP2 -718491 sc-eQTL 8.02e-01 -0.0251 0.0998 0.35 CD4_CTL L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 7.76e-03 0.265 0.0984 0.35 CD4_CTL L2
ENSG00000136014 USP44 -796447 sc-eQTL 4.09e-01 0.0656 0.0793 0.35 CD4_CTL L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 6.74e-01 0.0376 0.0892 0.35 CD4_CTL L2
ENSG00000173588 CEP83 295041 sc-eQTL 9.21e-01 0.00905 0.0913 0.35 CD4_CTL L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 1.12e-01 0.131 0.0817 0.35 CD4_CTL L2
ENSG00000028203 VEZT -462717 sc-eQTL 7.56e-01 -0.022 0.0708 0.355 CD4_Naive L2
ENSG00000111142 METAP2 -718491 sc-eQTL 1.15e-01 0.0964 0.0609 0.355 CD4_Naive L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 9.83e-02 0.123 0.0743 0.355 CD4_Naive L2
ENSG00000136014 USP44 -796447 sc-eQTL 4.90e-01 0.0595 0.0861 0.355 CD4_Naive L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 4.68e-01 -0.0426 0.0586 0.355 CD4_Naive L2
ENSG00000173588 CEP83 295041 sc-eQTL 8.12e-01 0.0151 0.0635 0.355 CD4_Naive L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 9.43e-02 0.091 0.0541 0.355 CD4_Naive L2
ENSG00000028203 VEZT -462717 sc-eQTL 3.02e-01 -0.078 0.0754 0.355 CD4_TCM L2
ENSG00000111142 METAP2 -718491 sc-eQTL 7.59e-01 0.0218 0.0708 0.355 CD4_TCM L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 3.28e-01 0.0806 0.0823 0.355 CD4_TCM L2
ENSG00000136014 USP44 -796447 sc-eQTL 5.89e-01 0.0518 0.0959 0.355 CD4_TCM L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.38e-01 -0.00546 0.0705 0.355 CD4_TCM L2
ENSG00000173588 CEP83 295041 sc-eQTL 7.38e-01 0.0252 0.0752 0.355 CD4_TCM L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 9.42e-02 0.108 0.0644 0.355 CD4_TCM L2
ENSG00000028203 VEZT -462717 sc-eQTL 9.63e-01 -0.00451 0.0965 0.355 CD4_TEM L2
ENSG00000111142 METAP2 -718491 sc-eQTL 2.07e-01 -0.108 0.0852 0.355 CD4_TEM L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 4.32e-01 -0.0706 0.0897 0.355 CD4_TEM L2
ENSG00000136014 USP44 -796447 sc-eQTL 2.37e-01 0.107 0.09 0.355 CD4_TEM L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 3.86e-01 -0.0669 0.0769 0.355 CD4_TEM L2
ENSG00000173588 CEP83 295041 sc-eQTL 3.74e-01 -0.077 0.0864 0.355 CD4_TEM L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 6.71e-02 0.143 0.0776 0.355 CD4_TEM L2
ENSG00000028203 VEZT -462717 sc-eQTL 9.33e-01 -0.00727 0.0859 0.355 CD8_CTL L2
ENSG00000057704 TMCC3 104472 sc-eQTL 7.90e-01 0.0202 0.0757 0.355 CD8_CTL L2
ENSG00000111142 METAP2 -718491 sc-eQTL 5.42e-01 -0.0525 0.0859 0.355 CD8_CTL L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 7.21e-01 0.034 0.095 0.355 CD8_CTL L2
ENSG00000136014 USP44 -796447 sc-eQTL 2.10e-01 0.114 0.0908 0.355 CD8_CTL L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 1.44e-01 0.113 0.0773 0.355 CD8_CTL L2
ENSG00000173588 CEP83 295041 sc-eQTL 6.45e-01 -0.0394 0.0856 0.355 CD8_CTL L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 5.62e-01 -0.0391 0.0673 0.355 CD8_CTL L2
ENSG00000028203 VEZT -462717 sc-eQTL 8.16e-01 0.0205 0.0878 0.355 CD8_Naive L2
ENSG00000057704 TMCC3 104472 sc-eQTL 4.73e-01 0.0493 0.0685 0.355 CD8_Naive L2
ENSG00000111142 METAP2 -718491 sc-eQTL 1.09e-01 0.127 0.079 0.355 CD8_Naive L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 5.21e-01 0.0567 0.0881 0.355 CD8_Naive L2
ENSG00000136014 USP44 -796447 sc-eQTL 8.66e-01 0.0134 0.0796 0.355 CD8_Naive L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.75e-01 0.00254 0.0806 0.355 CD8_Naive L2
ENSG00000173588 CEP83 295041 sc-eQTL 1.23e-01 -0.12 0.0772 0.355 CD8_Naive L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 5.92e-01 0.0345 0.0643 0.355 CD8_Naive L2
ENSG00000028203 VEZT -462717 sc-eQTL 4.58e-01 -0.0701 0.0942 0.356 CD8_TCM L2
ENSG00000057704 TMCC3 104472 sc-eQTL 5.98e-02 0.136 0.072 0.356 CD8_TCM L2
ENSG00000111142 METAP2 -718491 sc-eQTL 2.81e-01 0.103 0.0953 0.356 CD8_TCM L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 1.48e-01 -0.139 0.0957 0.356 CD8_TCM L2
ENSG00000136014 USP44 -796447 sc-eQTL 7.99e-01 -0.022 0.0863 0.356 CD8_TCM L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.05e-01 -0.0109 0.091 0.356 CD8_TCM L2
ENSG00000173588 CEP83 295041 sc-eQTL 2.40e-01 -0.11 0.0931 0.356 CD8_TCM L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 9.87e-01 -0.00127 0.0752 0.356 CD8_TCM L2
ENSG00000028203 VEZT -462717 sc-eQTL 7.11e-01 0.0365 0.0983 0.354 CD8_TEM L2
ENSG00000057704 TMCC3 104472 sc-eQTL 3.96e-01 0.0717 0.0844 0.354 CD8_TEM L2
ENSG00000111142 METAP2 -718491 sc-eQTL 6.79e-01 -0.0396 0.0954 0.354 CD8_TEM L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 6.10e-01 -0.0512 0.1 0.354 CD8_TEM L2
ENSG00000136014 USP44 -796447 sc-eQTL 6.98e-01 0.0324 0.0833 0.354 CD8_TEM L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 4.91e-01 0.0654 0.0948 0.354 CD8_TEM L2
ENSG00000173588 CEP83 295041 sc-eQTL 2.72e-01 0.107 0.0976 0.354 CD8_TEM L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 4.71e-01 -0.0604 0.0835 0.354 CD8_TEM L2
ENSG00000028203 VEZT -462717 sc-eQTL 9.56e-01 0.00522 0.0955 0.355 MAIT L2
ENSG00000057704 TMCC3 104472 sc-eQTL 3.88e-01 -0.0699 0.0807 0.355 MAIT L2
ENSG00000111142 METAP2 -718491 sc-eQTL 5.50e-01 0.0556 0.0928 0.355 MAIT L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 9.10e-01 -0.0102 0.09 0.355 MAIT L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 4.81e-01 -0.0558 0.0791 0.355 MAIT L2
ENSG00000173588 CEP83 295041 sc-eQTL 5.30e-01 -0.057 0.0906 0.355 MAIT L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 4.28e-01 0.0629 0.0792 0.355 MAIT L2
ENSG00000028203 VEZT -462717 sc-eQTL 3.22e-01 -0.0987 0.0993 0.351 NK_CD56bright L2
ENSG00000057704 TMCC3 104472 sc-eQTL 1.47e-01 0.138 0.0948 0.351 NK_CD56bright L2
ENSG00000111142 METAP2 -718491 sc-eQTL 4.60e-01 0.0724 0.0978 0.351 NK_CD56bright L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 4.24e-01 -0.0823 0.103 0.351 NK_CD56bright L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 2.15e-01 0.104 0.0839 0.351 NK_CD56bright L2
ENSG00000173588 CEP83 295041 sc-eQTL 6.94e-02 0.155 0.0847 0.351 NK_CD56bright L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 1.07e-01 0.131 0.0812 0.351 NK_CD56bright L2
ENSG00000028203 VEZT -462717 sc-eQTL 5.84e-01 -0.051 0.093 0.356 NK_CD56dim L2
ENSG00000057704 TMCC3 104472 sc-eQTL 4.77e-01 0.0577 0.081 0.356 NK_CD56dim L2
ENSG00000111142 METAP2 -718491 sc-eQTL 1.03e-01 0.137 0.0835 0.356 NK_CD56dim L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 3.82e-01 0.0748 0.0855 0.356 NK_CD56dim L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 2.96e-01 0.0785 0.075 0.356 NK_CD56dim L2
ENSG00000173588 CEP83 295041 sc-eQTL 1.24e-01 0.134 0.0864 0.356 NK_CD56dim L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 1.42e-01 0.0889 0.0603 0.356 NK_CD56dim L2
ENSG00000028203 VEZT -462717 sc-eQTL 9.58e-01 -0.00547 0.103 0.356 NK_HLA L2
ENSG00000057704 TMCC3 104472 sc-eQTL 1.72e-01 0.125 0.0911 0.356 NK_HLA L2
ENSG00000111142 METAP2 -718491 sc-eQTL 4.66e-01 -0.0703 0.0962 0.356 NK_HLA L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 7.40e-01 -0.0338 0.102 0.356 NK_HLA L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 4.26e-01 0.0661 0.0828 0.356 NK_HLA L2
ENSG00000173588 CEP83 295041 sc-eQTL 9.88e-02 -0.157 0.0946 0.356 NK_HLA L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 9.88e-01 -0.0013 0.0857 0.356 NK_HLA L2
ENSG00000028203 VEZT -462717 sc-eQTL 9.31e-01 0.0075 0.086 0.356 NK_cytokine L2
ENSG00000057704 TMCC3 104472 sc-eQTL 4.63e-01 -0.0648 0.0881 0.356 NK_cytokine L2
ENSG00000111142 METAP2 -718491 sc-eQTL 7.02e-01 0.0335 0.0873 0.356 NK_cytokine L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 9.59e-01 0.00462 0.0904 0.356 NK_cytokine L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 2.48e-01 -0.0903 0.078 0.356 NK_cytokine L2
ENSG00000173588 CEP83 295041 sc-eQTL 9.05e-01 0.0107 0.0898 0.356 NK_cytokine L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 1.03e-01 0.102 0.0623 0.356 NK_cytokine L2
ENSG00000028203 VEZT -462717 sc-eQTL 1.35e-01 -0.179 0.119 0.341 PB L2
ENSG00000057704 TMCC3 104472 sc-eQTL 9.64e-01 0.00495 0.108 0.341 PB L2
ENSG00000111142 METAP2 -718491 sc-eQTL 3.49e-01 -0.112 0.119 0.341 PB L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 5.50e-01 -0.0683 0.114 0.341 PB L2
ENSG00000136014 USP44 -796447 sc-eQTL 5.29e-01 -0.0676 0.107 0.341 PB L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.28e-01 -0.00998 0.111 0.341 PB L2
ENSG00000173588 CEP83 295041 sc-eQTL 3.80e-01 0.101 0.115 0.341 PB L2
ENSG00000180263 FGD6 -462453 sc-eQTL 8.15e-01 0.0225 0.0958 0.341 PB L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 6.79e-01 0.0279 0.0673 0.341 PB L2
ENSG00000028203 VEZT -462717 sc-eQTL 8.70e-01 -0.0147 0.0896 0.354 Pro_T L2
ENSG00000057704 TMCC3 104472 sc-eQTL 9.31e-01 0.0069 0.0798 0.354 Pro_T L2
ENSG00000111142 METAP2 -718491 sc-eQTL 6.83e-02 0.14 0.0763 0.354 Pro_T L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 1.34e-01 0.139 0.0922 0.354 Pro_T L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 1.70e-01 0.124 0.0904 0.354 Pro_T L2
ENSG00000173588 CEP83 295041 sc-eQTL 9.76e-01 0.00268 0.0899 0.354 Pro_T L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 7.93e-01 0.0147 0.0562 0.354 Pro_T L2
ENSG00000028203 VEZT -462717 sc-eQTL 8.08e-01 -0.0224 0.0923 0.355 Treg L2
ENSG00000111142 METAP2 -718491 sc-eQTL 7.57e-01 0.0269 0.0871 0.355 Treg L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 6.08e-01 -0.0474 0.0921 0.355 Treg L2
ENSG00000136014 USP44 -796447 sc-eQTL 4.08e-01 -0.0683 0.0824 0.355 Treg L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 1.76e-01 -0.115 0.0846 0.355 Treg L2
ENSG00000173588 CEP83 295041 sc-eQTL 5.02e-01 0.0611 0.0909 0.355 Treg L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 6.98e-01 0.0271 0.0697 0.355 Treg L2
ENSG00000028203 VEZT -462717 sc-eQTL 1.40e-01 -0.134 0.0908 0.361 cDC L2
ENSG00000057704 TMCC3 104472 sc-eQTL 8.96e-01 0.0128 0.0984 0.361 cDC L2
ENSG00000111142 METAP2 -718491 sc-eQTL 9.79e-01 -0.00265 0.1 0.361 cDC L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 6.88e-01 0.0388 0.0964 0.361 cDC L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 8.46e-01 -0.0167 0.0859 0.361 cDC L2
ENSG00000173588 CEP83 295041 sc-eQTL 4.13e-01 -0.066 0.0805 0.361 cDC L2
ENSG00000180263 FGD6 -462453 sc-eQTL 4.76e-01 -0.066 0.0925 0.361 cDC L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 2.44e-01 0.0918 0.0785 0.361 cDC L2
ENSG00000028203 VEZT -462717 sc-eQTL 7.08e-01 -0.0343 0.0916 0.355 cMono_IL1B L2
ENSG00000057704 TMCC3 104472 sc-eQTL 3.41e-02 0.152 0.0713 0.355 cMono_IL1B L2
ENSG00000111142 METAP2 -718491 sc-eQTL 1.06e-02 -0.201 0.0779 0.355 cMono_IL1B L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 7.18e-01 -0.0301 0.0833 0.355 cMono_IL1B L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 3.91e-01 0.0545 0.0634 0.355 cMono_IL1B L2
ENSG00000173588 CEP83 295041 sc-eQTL 9.38e-02 -0.145 0.086 0.355 cMono_IL1B L2
ENSG00000180263 FGD6 -462453 sc-eQTL 5.07e-01 0.0491 0.0738 0.355 cMono_IL1B L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 3.63e-01 0.0478 0.0524 0.355 cMono_IL1B L2
ENSG00000028203 VEZT -462717 sc-eQTL 1.19e-01 -0.145 0.0925 0.355 cMono_S100A L2
ENSG00000057704 TMCC3 104472 sc-eQTL 6.18e-02 0.152 0.0808 0.355 cMono_S100A L2
ENSG00000111142 METAP2 -718491 sc-eQTL 2.20e-01 -0.11 0.0896 0.355 cMono_S100A L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 4.79e-01 -0.0628 0.0885 0.355 cMono_S100A L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 1.99e-01 -0.0853 0.0662 0.355 cMono_S100A L2
ENSG00000173588 CEP83 295041 sc-eQTL 8.07e-01 -0.0229 0.0939 0.355 cMono_S100A L2
ENSG00000180263 FGD6 -462453 sc-eQTL 6.10e-01 -0.0439 0.086 0.355 cMono_S100A L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 2.52e-01 0.07 0.061 0.355 cMono_S100A L2
ENSG00000028203 VEZT -462717 sc-eQTL 5.61e-01 -0.0664 0.114 0.348 gdT L2
ENSG00000057704 TMCC3 104472 sc-eQTL 9.63e-01 -0.00408 0.0872 0.348 gdT L2
ENSG00000111142 METAP2 -718491 sc-eQTL 1.72e-01 -0.148 0.108 0.348 gdT L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 9.00e-01 -0.0146 0.116 0.348 gdT L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.97e-01 0.000367 0.11 0.348 gdT L2
ENSG00000173588 CEP83 295041 sc-eQTL 9.69e-01 0.00419 0.107 0.348 gdT L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 4.96e-01 -0.0636 0.0932 0.348 gdT L2
ENSG00000028203 VEZT -462717 sc-eQTL 5.35e-01 -0.061 0.0983 0.358 intMono L2
ENSG00000057704 TMCC3 104472 sc-eQTL 9.61e-01 -0.00469 0.0955 0.358 intMono L2
ENSG00000111142 METAP2 -718491 sc-eQTL 5.98e-01 -0.0528 0.1 0.358 intMono L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 4.97e-01 -0.0636 0.0934 0.358 intMono L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 4.22e-01 -0.0647 0.0804 0.358 intMono L2
ENSG00000173588 CEP83 295041 sc-eQTL 4.43e-01 -0.0744 0.0968 0.358 intMono L2
ENSG00000180263 FGD6 -462453 sc-eQTL 6.26e-01 0.0425 0.0871 0.358 intMono L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 2.08e-01 0.0782 0.0619 0.358 intMono L2
ENSG00000028203 VEZT -462717 sc-eQTL 7.11e-01 0.0345 0.0928 0.353 ncMono L2
ENSG00000057704 TMCC3 104472 sc-eQTL 7.78e-01 0.0253 0.0896 0.353 ncMono L2
ENSG00000111142 METAP2 -718491 sc-eQTL 6.11e-01 0.0497 0.0975 0.353 ncMono L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 1.16e-01 0.152 0.0963 0.353 ncMono L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 3.73e-01 0.055 0.0616 0.353 ncMono L2
ENSG00000173588 CEP83 295041 sc-eQTL 6.79e-01 0.04 0.0965 0.353 ncMono L2
ENSG00000180263 FGD6 -462453 sc-eQTL 5.54e-01 0.0543 0.0916 0.353 ncMono L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 7.62e-01 0.0247 0.0815 0.353 ncMono L2
ENSG00000028203 VEZT -462717 sc-eQTL 2.78e-01 -0.112 0.103 0.364 pDC L2
ENSG00000057704 TMCC3 104472 sc-eQTL 2.47e-01 0.116 0.1 0.364 pDC L2
ENSG00000111142 METAP2 -718491 sc-eQTL 7.90e-01 -0.0281 0.105 0.364 pDC L2
ENSG00000120798 NR2C1 -318599 sc-eQTL 4.63e-01 0.0765 0.104 0.364 pDC L2
ENSG00000136040 PLXNC1 606452 sc-eQTL 2.82e-01 0.108 0.0997 0.364 pDC L2
ENSG00000173588 CEP83 295041 sc-eQTL 3.63e-01 0.0979 0.107 0.364 pDC L2
ENSG00000180263 FGD6 -462453 sc-eQTL 7.40e-01 -0.0301 0.0905 0.364 pDC L2
ENSG00000184752 NDUFA12 -248719 sc-eQTL 4.61e-01 -0.0658 0.0891 0.364 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -462717 sc-eQTL 1.15e-01 0.145 0.0919 0.355 B_Memory LOneK1K
ENSG00000057704 TMCC3 104472 sc-eQTL 2.92e-02 0.212 0.0965 0.355 B_Memory LOneK1K
ENSG00000111142 METAP2 -718491 sc-eQTL 5.11e-01 -0.0567 0.086 0.355 B_Memory LOneK1K
ENSG00000120798 NR2C1 -318599 sc-eQTL 1.30e-02 -0.244 0.0975 0.355 B_Memory LOneK1K
ENSG00000136014 USP44 -796447 sc-eQTL 6.25e-01 -0.0449 0.0915 0.355 B_Memory LOneK1K
ENSG00000136040 PLXNC1 606452 sc-eQTL 7.86e-01 0.0161 0.059 0.355 B_Memory LOneK1K
ENSG00000173588 CEP83 295041 sc-eQTL 6.30e-01 -0.0398 0.0824 0.355 B_Memory LOneK1K
ENSG00000180263 FGD6 -462453 sc-eQTL 7.64e-01 -0.0246 0.0819 0.355 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -248719 sc-eQTL 9.85e-01 0.00106 0.0566 0.355 B_Memory LOneK1K
ENSG00000028203 VEZT -462717 sc-eQTL 2.28e-01 -0.103 0.0854 0.355 B_Naive LOneK1K
ENSG00000057704 TMCC3 104472 sc-eQTL 6.81e-01 0.0357 0.0868 0.355 B_Naive LOneK1K
ENSG00000111142 METAP2 -718491 sc-eQTL 2.75e-01 0.078 0.0713 0.355 B_Naive LOneK1K
ENSG00000120798 NR2C1 -318599 sc-eQTL 4.93e-01 0.0638 0.0929 0.355 B_Naive LOneK1K
ENSG00000136014 USP44 -796447 sc-eQTL 7.75e-01 -0.0236 0.0825 0.355 B_Naive LOneK1K
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.34e-01 0.00584 0.0705 0.355 B_Naive LOneK1K
ENSG00000173588 CEP83 295041 sc-eQTL 3.51e-01 -0.0685 0.0733 0.355 B_Naive LOneK1K
ENSG00000180263 FGD6 -462453 sc-eQTL 8.30e-01 0.0195 0.0906 0.355 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -248719 sc-eQTL 7.34e-01 0.017 0.0501 0.355 B_Naive LOneK1K
ENSG00000028203 VEZT -462717 sc-eQTL 1.79e-01 -0.113 0.0841 0.355 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 104472 sc-eQTL 8.98e-03 0.174 0.0658 0.355 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -718491 sc-eQTL 2.23e-02 -0.164 0.0713 0.355 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -318599 sc-eQTL 3.56e-01 -0.0725 0.0784 0.355 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 606452 sc-eQTL 8.88e-01 0.00834 0.0593 0.355 CD14_Mono LOneK1K
ENSG00000173588 CEP83 295041 sc-eQTL 1.66e-01 -0.112 0.0804 0.355 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -462453 sc-eQTL 5.59e-01 0.0427 0.0729 0.355 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -248719 sc-eQTL 1.87e-01 0.0661 0.0499 0.355 CD14_Mono LOneK1K
ENSG00000028203 VEZT -462717 sc-eQTL 6.06e-01 -0.0485 0.094 0.358 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 104472 sc-eQTL 9.97e-01 0.000303 0.0872 0.358 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -718491 sc-eQTL 7.53e-01 -0.0272 0.0861 0.358 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -318599 sc-eQTL 4.49e-01 0.0731 0.0963 0.358 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 606452 sc-eQTL 8.14e-01 0.0131 0.0556 0.358 CD16_Mono LOneK1K
ENSG00000173588 CEP83 295041 sc-eQTL 5.00e-01 -0.0623 0.0923 0.358 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -462453 sc-eQTL 1.68e-01 0.109 0.0786 0.358 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -248719 sc-eQTL 5.24e-01 0.0401 0.0629 0.358 CD16_Mono LOneK1K
ENSG00000028203 VEZT -462717 sc-eQTL 7.93e-01 -0.0226 0.0857 0.356 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 104472 sc-eQTL 7.11e-01 0.0297 0.08 0.356 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -718491 sc-eQTL 1.50e-01 0.0985 0.0681 0.356 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -318599 sc-eQTL 5.21e-01 0.0499 0.0775 0.356 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 606452 sc-eQTL 9.02e-01 -0.00838 0.068 0.356 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 295041 sc-eQTL 2.19e-01 0.094 0.0762 0.356 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -248719 sc-eQTL 1.13e-01 0.0888 0.0559 0.356 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000180263 FGD6 -462453 eQTL 0.000708 0.0685 0.0202 0.0 0.0 0.33
ENSG00000184752 NDUFA12 -248719 eQTL 2.98e-05 0.0779 0.0186 0.0 0.0 0.33

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000136040 \N 606452 3.27e-07 2.89e-07 7e-08 2.53e-07 1.03e-07 1.26e-07 3.11e-07 5.84e-08 2.26e-07 1.05e-07 2.04e-07 1.52e-07 3.77e-07 9.18e-08 6.6e-08 9.35e-08 6.63e-08 2.04e-07 7.76e-08 7.49e-08 1.33e-07 2.09e-07 2e-07 4.17e-08 3.27e-07 1.56e-07 1.33e-07 1.61e-07 1.44e-07 1.69e-07 1.43e-07 5.22e-08 4.74e-08 1.02e-07 6.35e-08 3.43e-08 8.87e-08 5.8e-08 4.83e-08 5.56e-08 6e-08 2.15e-07 3.31e-08 2.1e-08 3.29e-08 9.31e-09 7.26e-08 2.2e-09 4.85e-08
ENSG00000184752 NDUFA12 -248719 1.89e-06 3.09e-06 2.93e-07 1.7e-06 4.75e-07 8.62e-07 1.48e-06 4.17e-07 1.81e-06 7.24e-07 1.99e-06 1.45e-06 3.58e-06 1.36e-06 4.61e-07 1.15e-06 9.79e-07 1.32e-06 6.65e-07 1.04e-06 7.37e-07 2.44e-06 2.13e-06 8.29e-07 3.36e-06 9.68e-07 1.15e-06 1.44e-06 1.78e-06 1.65e-06 1.38e-06 2.86e-07 3.84e-07 6.15e-07 8.8e-07 5.4e-07 8.1e-07 4.62e-07 7.16e-07 2.31e-07 3.05e-07 3e-06 4.93e-07 1.66e-07 2.98e-07 3.21e-07 4.02e-07 1.42e-07 1.63e-07