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Genes within 1Mb (chr12:94733515:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -484231 sc-eQTL 1.43e-01 0.316 0.215 0.05 CD8_TEM L2
ENSG00000057704 TMCC3 82958 sc-eQTL 9.61e-01 -0.00909 0.186 0.05 CD8_TEM L2
ENSG00000111142 METAP2 -740005 sc-eQTL 2.28e-01 0.253 0.209 0.05 CD8_TEM L2
ENSG00000120798 NR2C1 -340113 sc-eQTL 2.40e-01 -0.259 0.22 0.05 CD8_TEM L2
ENSG00000136014 USP44 -817961 sc-eQTL 7.33e-01 0.0626 0.183 0.05 CD8_TEM L2
ENSG00000136040 PLXNC1 584938 sc-eQTL 2.28e-01 0.251 0.208 0.05 CD8_TEM L2
ENSG00000173588 CEP83 273527 sc-eQTL 2.14e-01 -0.267 0.214 0.05 CD8_TEM L2
ENSG00000184752 NDUFA12 -270233 sc-eQTL 9.11e-01 -0.0206 0.184 0.05 CD8_TEM L2
ENSG00000028203 VEZT -484231 sc-eQTL 2.73e-01 0.254 0.232 0.05 NK_HLA L2
ENSG00000057704 TMCC3 82958 sc-eQTL 8.13e-01 -0.0489 0.206 0.05 NK_HLA L2
ENSG00000111142 METAP2 -740005 sc-eQTL 5.78e-02 0.409 0.214 0.05 NK_HLA L2
ENSG00000120798 NR2C1 -340113 sc-eQTL 4.83e-01 0.16 0.228 0.05 NK_HLA L2
ENSG00000136040 PLXNC1 584938 sc-eQTL 8.01e-01 0.0471 0.186 0.05 NK_HLA L2
ENSG00000173588 CEP83 273527 sc-eQTL 7.45e-01 0.0697 0.214 0.05 NK_HLA L2
ENSG00000184752 NDUFA12 -270233 sc-eQTL 5.92e-01 0.103 0.193 0.05 NK_HLA L2
ENSG00000028203 VEZT -484231 sc-eQTL 6.48e-01 0.117 0.255 0.055 gdT L2
ENSG00000057704 TMCC3 82958 sc-eQTL 6.11e-01 0.0995 0.195 0.055 gdT L2
ENSG00000111142 METAP2 -740005 sc-eQTL 9.76e-01 -0.00723 0.242 0.055 gdT L2
ENSG00000120798 NR2C1 -340113 sc-eQTL 7.52e-01 -0.082 0.259 0.055 gdT L2
ENSG00000136040 PLXNC1 584938 sc-eQTL 1.66e-01 -0.34 0.244 0.055 gdT L2
ENSG00000173588 CEP83 273527 sc-eQTL 7.40e-01 -0.0797 0.24 0.055 gdT L2
ENSG00000184752 NDUFA12 -270233 sc-eQTL 1.54e-01 -0.297 0.207 0.055 gdT L2
ENSG00000028203 VEZT -484231 sc-eQTL 5.73e-01 0.126 0.223 0.051 pDC L2
ENSG00000057704 TMCC3 82958 sc-eQTL 8.19e-01 -0.0499 0.217 0.051 pDC L2
ENSG00000111142 METAP2 -740005 sc-eQTL 9.18e-01 -0.0234 0.228 0.051 pDC L2
ENSG00000120798 NR2C1 -340113 sc-eQTL 3.72e-01 0.201 0.224 0.051 pDC L2
ENSG00000136040 PLXNC1 584938 sc-eQTL 8.03e-01 0.0539 0.216 0.051 pDC L2
ENSG00000173588 CEP83 273527 sc-eQTL 8.53e-02 -0.399 0.231 0.051 pDC L2
ENSG00000180263 FGD6 -483967 sc-eQTL 7.44e-01 0.0639 0.196 0.051 pDC L2
ENSG00000184752 NDUFA12 -270233 sc-eQTL 1.87e-01 0.254 0.192 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000258172 \N 456320 1.11e-06 6.46e-07 1.27e-07 4.27e-07 1.12e-07 2.64e-07 6.09e-07 1.56e-07 5.88e-07 2.82e-07 9.07e-07 4.31e-07 9.77e-07 1.52e-07 2.86e-07 2.85e-07 4.54e-07 4.33e-07 2.65e-07 1.9e-07 2.09e-07 4.66e-07 4.2e-07 2.22e-07 1.06e-06 2.49e-07 3.26e-07 2.73e-07 4.9e-07 7.06e-07 3.66e-07 6.77e-08 5.39e-08 1.71e-07 3.38e-07 1.46e-07 8.43e-08 1.1e-07 7.99e-08 2.24e-08 1.39e-07 6.81e-07 4.3e-08 1.07e-08 1.94e-07 1.37e-08 1.32e-07 1.24e-08 5.96e-08