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Genes within 1Mb (chr12:94706859:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -510887 sc-eQTL 3.69e-01 0.068 0.0755 0.316 B L1
ENSG00000057704 TMCC3 56302 sc-eQTL 3.57e-01 0.082 0.0887 0.316 B L1
ENSG00000111142 METAP2 -766661 sc-eQTL 3.90e-01 -0.0572 0.0665 0.316 B L1
ENSG00000120798 NR2C1 -366769 sc-eQTL 1.67e-01 0.116 0.0837 0.316 B L1
ENSG00000136014 USP44 -844617 sc-eQTL 8.93e-01 -0.0103 0.0767 0.316 B L1
ENSG00000136040 PLXNC1 558282 sc-eQTL 6.35e-01 0.0239 0.0504 0.316 B L1
ENSG00000173588 CEP83 246871 sc-eQTL 9.09e-01 -0.00724 0.0636 0.316 B L1
ENSG00000180263 FGD6 -510623 sc-eQTL 6.61e-01 0.0337 0.0769 0.316 B L1
ENSG00000184752 NDUFA12 -296889 sc-eQTL 8.63e-03 -0.0957 0.0361 0.316 B L1
ENSG00000028203 VEZT -510887 sc-eQTL 6.68e-01 -0.0269 0.0626 0.316 CD4T L1
ENSG00000111142 METAP2 -766661 sc-eQTL 1.67e-01 -0.0751 0.0541 0.316 CD4T L1
ENSG00000120798 NR2C1 -366769 sc-eQTL 3.26e-01 -0.0595 0.0604 0.316 CD4T L1
ENSG00000136014 USP44 -844617 sc-eQTL 1.99e-01 -0.106 0.0824 0.316 CD4T L1
ENSG00000136040 PLXNC1 558282 sc-eQTL 5.76e-01 0.0298 0.0532 0.316 CD4T L1
ENSG00000173588 CEP83 246871 sc-eQTL 3.77e-01 0.0493 0.0557 0.316 CD4T L1
ENSG00000184752 NDUFA12 -296889 sc-eQTL 8.17e-01 0.0136 0.0584 0.316 CD4T L1
ENSG00000028203 VEZT -510887 sc-eQTL 1.70e-01 -0.102 0.0744 0.316 CD8T L1
ENSG00000057704 TMCC3 56302 sc-eQTL 1.09e-05 -0.216 0.048 0.316 CD8T L1
ENSG00000111142 METAP2 -766661 sc-eQTL 2.59e-02 -0.142 0.0632 0.316 CD8T L1
ENSG00000120798 NR2C1 -366769 sc-eQTL 7.85e-02 -0.143 0.0807 0.316 CD8T L1
ENSG00000136014 USP44 -844617 sc-eQTL 3.54e-01 -0.0675 0.0727 0.316 CD8T L1
ENSG00000136040 PLXNC1 558282 sc-eQTL 6.04e-01 -0.036 0.0692 0.316 CD8T L1
ENSG00000173588 CEP83 246871 sc-eQTL 7.04e-01 0.0245 0.0646 0.316 CD8T L1
ENSG00000184752 NDUFA12 -296889 sc-eQTL 5.16e-01 0.0344 0.0528 0.316 CD8T L1
ENSG00000028203 VEZT -510887 sc-eQTL 3.78e-01 -0.078 0.0884 0.322 DC L1
ENSG00000057704 TMCC3 56302 sc-eQTL 6.44e-01 -0.0434 0.0938 0.322 DC L1
ENSG00000111142 METAP2 -766661 sc-eQTL 4.88e-01 0.0644 0.0928 0.322 DC L1
ENSG00000120798 NR2C1 -366769 sc-eQTL 1.56e-01 -0.128 0.0895 0.322 DC L1
ENSG00000136040 PLXNC1 558282 sc-eQTL 2.37e-01 0.0992 0.0837 0.322 DC L1
ENSG00000173588 CEP83 246871 sc-eQTL 3.89e-01 0.0645 0.0746 0.322 DC L1
ENSG00000180263 FGD6 -510623 sc-eQTL 8.98e-01 0.0107 0.0832 0.322 DC L1
ENSG00000184752 NDUFA12 -296889 sc-eQTL 4.09e-01 0.0579 0.07 0.322 DC L1
ENSG00000028203 VEZT -510887 sc-eQTL 1.30e-01 0.124 0.0813 0.316 Mono L1
ENSG00000057704 TMCC3 56302 sc-eQTL 6.52e-01 0.0287 0.0635 0.316 Mono L1
ENSG00000111142 METAP2 -766661 sc-eQTL 4.56e-01 -0.0486 0.065 0.316 Mono L1
ENSG00000120798 NR2C1 -366769 sc-eQTL 9.23e-01 -0.00751 0.0776 0.316 Mono L1
ENSG00000136040 PLXNC1 558282 sc-eQTL 8.96e-01 0.00691 0.0527 0.316 Mono L1
ENSG00000173588 CEP83 246871 sc-eQTL 3.79e-01 -0.0686 0.0778 0.316 Mono L1
ENSG00000180263 FGD6 -510623 sc-eQTL 5.58e-01 0.0407 0.0693 0.316 Mono L1
ENSG00000184752 NDUFA12 -296889 sc-eQTL 7.32e-02 0.0891 0.0495 0.316 Mono L1
ENSG00000028203 VEZT -510887 sc-eQTL 9.09e-01 0.00945 0.0822 0.318 NK L1
ENSG00000057704 TMCC3 56302 sc-eQTL 2.10e-01 -0.0971 0.0773 0.318 NK L1
ENSG00000111142 METAP2 -766661 sc-eQTL 3.66e-01 -0.0589 0.065 0.318 NK L1
ENSG00000120798 NR2C1 -366769 sc-eQTL 5.00e-01 0.052 0.077 0.318 NK L1
ENSG00000136040 PLXNC1 558282 sc-eQTL 4.73e-01 -0.0456 0.0634 0.318 NK L1
ENSG00000173588 CEP83 246871 sc-eQTL 4.22e-02 -0.146 0.0715 0.318 NK L1
ENSG00000184752 NDUFA12 -296889 sc-eQTL 7.30e-01 0.0184 0.0532 0.318 NK L1
ENSG00000028203 VEZT -510887 sc-eQTL 6.07e-01 -0.0469 0.0911 0.316 Other_T L1
ENSG00000057704 TMCC3 56302 sc-eQTL 3.22e-03 -0.227 0.076 0.316 Other_T L1
ENSG00000111142 METAP2 -766661 sc-eQTL 2.90e-01 0.075 0.0707 0.316 Other_T L1
ENSG00000120798 NR2C1 -366769 sc-eQTL 3.27e-01 -0.0866 0.0882 0.316 Other_T L1
ENSG00000136040 PLXNC1 558282 sc-eQTL 9.24e-02 0.121 0.0713 0.316 Other_T L1
ENSG00000173588 CEP83 246871 sc-eQTL 5.57e-01 -0.0475 0.0807 0.316 Other_T L1
ENSG00000184752 NDUFA12 -296889 sc-eQTL 9.96e-01 0.000241 0.045 0.316 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -510887 sc-eQTL 6.25e-01 -0.051 0.104 0.309 B_Activated L2
ENSG00000057704 TMCC3 56302 sc-eQTL 2.06e-01 -0.112 0.0884 0.309 B_Activated L2
ENSG00000111142 METAP2 -766661 sc-eQTL 5.56e-02 0.207 0.107 0.309 B_Activated L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 3.49e-01 -0.0974 0.104 0.309 B_Activated L2
ENSG00000136014 USP44 -844617 sc-eQTL 5.35e-01 0.0493 0.0793 0.309 B_Activated L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 6.19e-01 0.0417 0.0838 0.309 B_Activated L2
ENSG00000173588 CEP83 246871 sc-eQTL 2.32e-01 -0.125 0.104 0.309 B_Activated L2
ENSG00000180263 FGD6 -510623 sc-eQTL 3.03e-01 -0.0758 0.0733 0.309 B_Activated L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 1.81e-01 -0.123 0.0915 0.309 B_Activated L2
ENSG00000028203 VEZT -510887 sc-eQTL 8.18e-01 0.0207 0.0896 0.315 B_Intermediate L2
ENSG00000057704 TMCC3 56302 sc-eQTL 1.75e-01 0.123 0.0902 0.315 B_Intermediate L2
ENSG00000111142 METAP2 -766661 sc-eQTL 6.34e-01 -0.0394 0.0827 0.315 B_Intermediate L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 5.68e-01 0.0518 0.0906 0.315 B_Intermediate L2
ENSG00000136014 USP44 -844617 sc-eQTL 2.01e-01 0.119 0.0925 0.315 B_Intermediate L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 3.09e-01 -0.0777 0.0761 0.315 B_Intermediate L2
ENSG00000173588 CEP83 246871 sc-eQTL 3.94e-01 -0.0721 0.0844 0.315 B_Intermediate L2
ENSG00000180263 FGD6 -510623 sc-eQTL 5.30e-01 -0.0521 0.0829 0.315 B_Intermediate L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 1.49e-02 -0.166 0.0677 0.315 B_Intermediate L2
ENSG00000028203 VEZT -510887 sc-eQTL 4.96e-01 0.0648 0.095 0.317 B_Memory L2
ENSG00000057704 TMCC3 56302 sc-eQTL 7.66e-01 -0.0287 0.0965 0.317 B_Memory L2
ENSG00000111142 METAP2 -766661 sc-eQTL 2.97e-01 -0.0963 0.0921 0.317 B_Memory L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 1.71e-01 0.136 0.0988 0.317 B_Memory L2
ENSG00000136014 USP44 -844617 sc-eQTL 2.66e-01 -0.0983 0.0882 0.317 B_Memory L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 9.59e-01 0.00381 0.0748 0.317 B_Memory L2
ENSG00000173588 CEP83 246871 sc-eQTL 4.23e-01 0.07 0.0871 0.317 B_Memory L2
ENSG00000180263 FGD6 -510623 sc-eQTL 5.22e-01 0.0563 0.0879 0.317 B_Memory L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 1.55e-01 -0.101 0.0704 0.317 B_Memory L2
ENSG00000028203 VEZT -510887 sc-eQTL 6.07e-01 -0.0458 0.089 0.316 B_Naive1 L2
ENSG00000057704 TMCC3 56302 sc-eQTL 2.13e-01 0.112 0.0897 0.316 B_Naive1 L2
ENSG00000111142 METAP2 -766661 sc-eQTL 7.54e-01 0.0237 0.0757 0.316 B_Naive1 L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 5.45e-01 -0.0559 0.0923 0.316 B_Naive1 L2
ENSG00000136014 USP44 -844617 sc-eQTL 1.37e-01 -0.135 0.0906 0.316 B_Naive1 L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 1.02e-01 0.125 0.076 0.316 B_Naive1 L2
ENSG00000173588 CEP83 246871 sc-eQTL 7.99e-01 -0.0201 0.079 0.316 B_Naive1 L2
ENSG00000180263 FGD6 -510623 sc-eQTL 2.43e-01 0.101 0.0863 0.316 B_Naive1 L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 3.26e-01 -0.0496 0.0503 0.316 B_Naive1 L2
ENSG00000028203 VEZT -510887 sc-eQTL 1.82e-01 0.13 0.0972 0.315 B_Naive2 L2
ENSG00000057704 TMCC3 56302 sc-eQTL 4.44e-01 0.0683 0.0891 0.315 B_Naive2 L2
ENSG00000111142 METAP2 -766661 sc-eQTL 2.92e-01 -0.095 0.0899 0.315 B_Naive2 L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 9.43e-02 0.165 0.098 0.315 B_Naive2 L2
ENSG00000136014 USP44 -844617 sc-eQTL 4.89e-01 -0.0624 0.0901 0.315 B_Naive2 L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 8.14e-01 0.0196 0.0834 0.315 B_Naive2 L2
ENSG00000173588 CEP83 246871 sc-eQTL 5.86e-01 0.0481 0.088 0.315 B_Naive2 L2
ENSG00000180263 FGD6 -510623 sc-eQTL 6.32e-01 0.0354 0.0738 0.315 B_Naive2 L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 8.58e-01 0.013 0.0726 0.315 B_Naive2 L2
ENSG00000028203 VEZT -510887 sc-eQTL 8.95e-01 0.0128 0.0976 0.323 CD4_CTL L2
ENSG00000111142 METAP2 -766661 sc-eQTL 3.75e-02 0.211 0.101 0.323 CD4_CTL L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 3.78e-01 -0.0903 0.102 0.323 CD4_CTL L2
ENSG00000136014 USP44 -844617 sc-eQTL 8.48e-02 -0.14 0.0806 0.323 CD4_CTL L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 2.92e-01 0.096 0.0909 0.323 CD4_CTL L2
ENSG00000173588 CEP83 246871 sc-eQTL 7.86e-01 -0.0253 0.0932 0.323 CD4_CTL L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 7.34e-01 -0.0285 0.084 0.323 CD4_CTL L2
ENSG00000028203 VEZT -510887 sc-eQTL 5.12e-01 0.0466 0.0709 0.316 CD4_Naive L2
ENSG00000111142 METAP2 -766661 sc-eQTL 9.47e-02 -0.102 0.061 0.316 CD4_Naive L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 1.37e-01 -0.111 0.0746 0.316 CD4_Naive L2
ENSG00000136014 USP44 -844617 sc-eQTL 1.31e-01 -0.13 0.0859 0.316 CD4_Naive L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 5.44e-01 -0.0358 0.0588 0.316 CD4_Naive L2
ENSG00000173588 CEP83 246871 sc-eQTL 6.87e-01 0.0257 0.0636 0.316 CD4_Naive L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 8.57e-01 0.00986 0.0546 0.316 CD4_Naive L2
ENSG00000028203 VEZT -510887 sc-eQTL 5.21e-01 -0.0482 0.0751 0.316 CD4_TCM L2
ENSG00000111142 METAP2 -766661 sc-eQTL 2.64e-01 -0.0787 0.0702 0.316 CD4_TCM L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 3.24e-01 -0.0809 0.0818 0.316 CD4_TCM L2
ENSG00000136014 USP44 -844617 sc-eQTL 4.32e-01 0.075 0.0953 0.316 CD4_TCM L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 1.32e-01 0.106 0.0698 0.316 CD4_TCM L2
ENSG00000173588 CEP83 246871 sc-eQTL 1.19e-01 0.116 0.0744 0.316 CD4_TCM L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 9.66e-01 0.00276 0.0645 0.316 CD4_TCM L2
ENSG00000028203 VEZT -510887 sc-eQTL 2.18e-01 -0.118 0.0956 0.316 CD4_TEM L2
ENSG00000111142 METAP2 -766661 sc-eQTL 7.70e-01 0.0249 0.085 0.316 CD4_TEM L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 1.52e-01 0.128 0.0889 0.316 CD4_TEM L2
ENSG00000136014 USP44 -844617 sc-eQTL 9.97e-01 0.000393 0.0898 0.316 CD4_TEM L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 2.39e-01 0.0902 0.0764 0.316 CD4_TEM L2
ENSG00000173588 CEP83 246871 sc-eQTL 5.52e-01 -0.0512 0.086 0.316 CD4_TEM L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 7.57e-01 0.0241 0.0778 0.316 CD4_TEM L2
ENSG00000028203 VEZT -510887 sc-eQTL 7.50e-01 -0.0272 0.0851 0.316 CD8_CTL L2
ENSG00000057704 TMCC3 56302 sc-eQTL 2.03e-04 -0.275 0.0726 0.316 CD8_CTL L2
ENSG00000111142 METAP2 -766661 sc-eQTL 4.12e-01 -0.0699 0.085 0.316 CD8_CTL L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 8.84e-01 0.0137 0.0942 0.316 CD8_CTL L2
ENSG00000136014 USP44 -844617 sc-eQTL 1.36e-01 -0.134 0.0898 0.316 CD8_CTL L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 6.70e-01 -0.0329 0.0769 0.316 CD8_CTL L2
ENSG00000173588 CEP83 246871 sc-eQTL 4.92e-01 -0.0583 0.0847 0.316 CD8_CTL L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 2.72e-01 0.0733 0.0665 0.316 CD8_CTL L2
ENSG00000028203 VEZT -510887 sc-eQTL 3.49e-01 -0.0818 0.0872 0.316 CD8_Naive L2
ENSG00000057704 TMCC3 56302 sc-eQTL 1.72e-01 -0.0932 0.068 0.316 CD8_Naive L2
ENSG00000111142 METAP2 -766661 sc-eQTL 8.18e-02 -0.137 0.0786 0.316 CD8_Naive L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 5.80e-02 -0.166 0.087 0.316 CD8_Naive L2
ENSG00000136014 USP44 -844617 sc-eQTL 3.13e-01 -0.08 0.0791 0.316 CD8_Naive L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 1.23e-01 0.123 0.0797 0.316 CD8_Naive L2
ENSG00000173588 CEP83 246871 sc-eQTL 3.64e-01 0.0702 0.0772 0.316 CD8_Naive L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 6.64e-01 0.0278 0.064 0.316 CD8_Naive L2
ENSG00000028203 VEZT -510887 sc-eQTL 1.91e-01 -0.124 0.0943 0.317 CD8_TCM L2
ENSG00000057704 TMCC3 56302 sc-eQTL 6.84e-01 -0.0298 0.073 0.317 CD8_TCM L2
ENSG00000111142 METAP2 -766661 sc-eQTL 2.55e-01 0.109 0.0957 0.317 CD8_TCM L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 2.85e-01 -0.103 0.0963 0.317 CD8_TCM L2
ENSG00000136014 USP44 -844617 sc-eQTL 1.84e-01 0.115 0.0863 0.317 CD8_TCM L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 3.11e-01 -0.0926 0.0912 0.317 CD8_TCM L2
ENSG00000173588 CEP83 246871 sc-eQTL 2.10e-01 -0.118 0.0935 0.317 CD8_TCM L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 3.38e-01 -0.0724 0.0753 0.317 CD8_TCM L2
ENSG00000028203 VEZT -510887 sc-eQTL 4.60e-01 0.0724 0.0977 0.313 CD8_TEM L2
ENSG00000057704 TMCC3 56302 sc-eQTL 4.49e-03 -0.237 0.0824 0.313 CD8_TEM L2
ENSG00000111142 METAP2 -766661 sc-eQTL 6.75e-01 -0.0399 0.0949 0.313 CD8_TEM L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 1.70e-01 0.137 0.0994 0.313 CD8_TEM L2
ENSG00000136014 USP44 -844617 sc-eQTL 7.06e-01 0.0314 0.0829 0.313 CD8_TEM L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 4.57e-02 -0.188 0.0935 0.313 CD8_TEM L2
ENSG00000173588 CEP83 246871 sc-eQTL 7.65e-01 0.0291 0.0974 0.313 CD8_TEM L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 3.88e-01 -0.0719 0.083 0.313 CD8_TEM L2
ENSG00000028203 VEZT -510887 sc-eQTL 9.14e-01 -0.0101 0.0931 0.318 MAIT L2
ENSG00000057704 TMCC3 56302 sc-eQTL 2.35e-03 -0.237 0.0771 0.318 MAIT L2
ENSG00000111142 METAP2 -766661 sc-eQTL 1.92e-01 0.118 0.0902 0.318 MAIT L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 5.33e-01 0.0548 0.0877 0.318 MAIT L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 2.44e-02 0.173 0.0763 0.318 MAIT L2
ENSG00000173588 CEP83 246871 sc-eQTL 2.36e-01 -0.105 0.0882 0.318 MAIT L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 6.24e-01 -0.038 0.0773 0.318 MAIT L2
ENSG00000028203 VEZT -510887 sc-eQTL 5.33e-01 -0.0605 0.0968 0.318 NK_CD56bright L2
ENSG00000057704 TMCC3 56302 sc-eQTL 8.66e-01 0.0156 0.0928 0.318 NK_CD56bright L2
ENSG00000111142 METAP2 -766661 sc-eQTL 6.98e-01 -0.0371 0.0953 0.318 NK_CD56bright L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 1.47e-01 0.145 0.0997 0.318 NK_CD56bright L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 8.17e-01 0.019 0.082 0.318 NK_CD56bright L2
ENSG00000173588 CEP83 246871 sc-eQTL 5.21e-02 -0.161 0.0823 0.318 NK_CD56bright L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 2.17e-01 0.0982 0.0793 0.318 NK_CD56bright L2
ENSG00000028203 VEZT -510887 sc-eQTL 7.60e-01 -0.0282 0.0919 0.317 NK_CD56dim L2
ENSG00000057704 TMCC3 56302 sc-eQTL 6.77e-01 -0.0334 0.08 0.317 NK_CD56dim L2
ENSG00000111142 METAP2 -766661 sc-eQTL 6.50e-01 0.0376 0.083 0.317 NK_CD56dim L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 5.34e-01 -0.0527 0.0845 0.317 NK_CD56dim L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 1.71e-01 -0.102 0.0739 0.317 NK_CD56dim L2
ENSG00000173588 CEP83 246871 sc-eQTL 7.81e-01 -0.0239 0.0858 0.317 NK_CD56dim L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 7.03e-01 0.0229 0.0599 0.317 NK_CD56dim L2
ENSG00000028203 VEZT -510887 sc-eQTL 1.02e-01 0.17 0.104 0.317 NK_HLA L2
ENSG00000057704 TMCC3 56302 sc-eQTL 3.71e-03 -0.266 0.0905 0.317 NK_HLA L2
ENSG00000111142 METAP2 -766661 sc-eQTL 5.61e-01 -0.0566 0.0971 0.317 NK_HLA L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 5.85e-01 0.0561 0.102 0.317 NK_HLA L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 5.83e-01 -0.046 0.0837 0.317 NK_HLA L2
ENSG00000173588 CEP83 246871 sc-eQTL 9.11e-01 0.0108 0.0962 0.317 NK_HLA L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 6.78e-01 -0.036 0.0865 0.317 NK_HLA L2
ENSG00000028203 VEZT -510887 sc-eQTL 6.74e-01 0.0357 0.0848 0.317 NK_cytokine L2
ENSG00000057704 TMCC3 56302 sc-eQTL 4.74e-02 -0.172 0.0862 0.317 NK_cytokine L2
ENSG00000111142 METAP2 -766661 sc-eQTL 3.34e-02 -0.182 0.0852 0.317 NK_cytokine L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 3.34e-01 0.0861 0.0889 0.317 NK_cytokine L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 9.32e-01 -0.00655 0.0771 0.317 NK_cytokine L2
ENSG00000173588 CEP83 246871 sc-eQTL 1.80e-01 -0.119 0.0882 0.317 NK_cytokine L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 5.18e-01 0.04 0.0617 0.317 NK_cytokine L2
ENSG00000028203 VEZT -510887 sc-eQTL 3.74e-01 0.105 0.118 0.296 PB L2
ENSG00000057704 TMCC3 56302 sc-eQTL 5.96e-01 -0.0564 0.106 0.296 PB L2
ENSG00000111142 METAP2 -766661 sc-eQTL 6.99e-01 0.0457 0.118 0.296 PB L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 7.84e-01 -0.0308 0.112 0.296 PB L2
ENSG00000136014 USP44 -844617 sc-eQTL 1.71e-01 0.144 0.105 0.296 PB L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 7.16e-01 0.0397 0.109 0.296 PB L2
ENSG00000173588 CEP83 246871 sc-eQTL 3.51e-01 -0.106 0.113 0.296 PB L2
ENSG00000180263 FGD6 -510623 sc-eQTL 3.95e-01 0.0802 0.0939 0.296 PB L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 6.76e-01 -0.0277 0.0661 0.296 PB L2
ENSG00000028203 VEZT -510887 sc-eQTL 5.35e-01 -0.0558 0.0898 0.317 Pro_T L2
ENSG00000057704 TMCC3 56302 sc-eQTL 8.74e-02 -0.137 0.0795 0.317 Pro_T L2
ENSG00000111142 METAP2 -766661 sc-eQTL 4.29e-01 0.0611 0.077 0.317 Pro_T L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 8.83e-01 -0.0137 0.093 0.317 Pro_T L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 9.83e-01 0.00195 0.091 0.317 Pro_T L2
ENSG00000173588 CEP83 246871 sc-eQTL 8.28e-01 0.0196 0.0902 0.317 Pro_T L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 9.52e-01 0.0034 0.0563 0.317 Pro_T L2
ENSG00000028203 VEZT -510887 sc-eQTL 7.55e-01 0.0286 0.0917 0.316 Treg L2
ENSG00000111142 METAP2 -766661 sc-eQTL 1.75e-01 -0.117 0.0862 0.316 Treg L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 6.13e-01 -0.0463 0.0915 0.316 Treg L2
ENSG00000136014 USP44 -844617 sc-eQTL 9.05e-01 0.00981 0.0819 0.316 Treg L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 5.67e-01 -0.0484 0.0844 0.316 Treg L2
ENSG00000173588 CEP83 246871 sc-eQTL 6.15e-01 0.0455 0.0903 0.316 Treg L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 5.75e-01 0.0388 0.0692 0.316 Treg L2
ENSG00000028203 VEZT -510887 sc-eQTL 2.27e-01 -0.109 0.0897 0.322 cDC L2
ENSG00000057704 TMCC3 56302 sc-eQTL 8.69e-01 0.0161 0.0971 0.322 cDC L2
ENSG00000111142 METAP2 -766661 sc-eQTL 7.69e-02 0.174 0.0979 0.322 cDC L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 1.48e-01 -0.137 0.0945 0.322 cDC L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 2.59e-01 0.0957 0.0845 0.322 cDC L2
ENSG00000173588 CEP83 246871 sc-eQTL 9.02e-01 0.00983 0.0795 0.322 cDC L2
ENSG00000180263 FGD6 -510623 sc-eQTL 6.40e-01 0.0427 0.0913 0.322 cDC L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 2.02e-01 0.099 0.0774 0.322 cDC L2
ENSG00000028203 VEZT -510887 sc-eQTL 5.73e-02 0.171 0.0896 0.316 cMono_IL1B L2
ENSG00000057704 TMCC3 56302 sc-eQTL 2.72e-01 0.0779 0.0708 0.316 cMono_IL1B L2
ENSG00000111142 METAP2 -766661 sc-eQTL 9.34e-01 0.00651 0.078 0.316 cMono_IL1B L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 4.52e-01 -0.0618 0.082 0.316 cMono_IL1B L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 8.17e-01 -0.0145 0.0626 0.316 cMono_IL1B L2
ENSG00000173588 CEP83 246871 sc-eQTL 4.68e-01 -0.0619 0.0852 0.316 cMono_IL1B L2
ENSG00000180263 FGD6 -510623 sc-eQTL 5.99e-01 0.0384 0.0728 0.316 cMono_IL1B L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 3.36e-01 0.0497 0.0516 0.316 cMono_IL1B L2
ENSG00000028203 VEZT -510887 sc-eQTL 9.70e-01 -0.00352 0.092 0.316 cMono_S100A L2
ENSG00000057704 TMCC3 56302 sc-eQTL 6.94e-01 0.0318 0.0805 0.316 cMono_S100A L2
ENSG00000111142 METAP2 -766661 sc-eQTL 9.48e-01 0.00579 0.0889 0.316 cMono_S100A L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 9.27e-01 -0.00805 0.0876 0.316 cMono_S100A L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 3.13e-01 -0.0663 0.0655 0.316 cMono_S100A L2
ENSG00000173588 CEP83 246871 sc-eQTL 4.95e-01 -0.0635 0.0928 0.316 cMono_S100A L2
ENSG00000180263 FGD6 -510623 sc-eQTL 2.19e-01 -0.104 0.0847 0.316 cMono_S100A L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 5.02e-03 0.168 0.0594 0.316 cMono_S100A L2
ENSG00000028203 VEZT -510887 sc-eQTL 9.42e-01 -0.00834 0.115 0.333 gdT L2
ENSG00000057704 TMCC3 56302 sc-eQTL 1.31e-01 -0.132 0.0873 0.333 gdT L2
ENSG00000111142 METAP2 -766661 sc-eQTL 2.28e-01 0.132 0.109 0.333 gdT L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 2.11e-01 -0.146 0.116 0.333 gdT L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 5.07e-01 0.0737 0.111 0.333 gdT L2
ENSG00000173588 CEP83 246871 sc-eQTL 7.80e-01 0.0303 0.108 0.333 gdT L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 2.87e-01 0.1 0.0938 0.333 gdT L2
ENSG00000028203 VEZT -510887 sc-eQTL 4.49e-01 0.0741 0.0977 0.318 intMono L2
ENSG00000057704 TMCC3 56302 sc-eQTL 8.56e-01 -0.0172 0.0949 0.318 intMono L2
ENSG00000111142 METAP2 -766661 sc-eQTL 4.45e-01 -0.0762 0.0995 0.318 intMono L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 5.52e-01 0.0553 0.0929 0.318 intMono L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 8.34e-01 -0.0168 0.08 0.318 intMono L2
ENSG00000173588 CEP83 246871 sc-eQTL 5.54e-01 0.0571 0.0963 0.318 intMono L2
ENSG00000180263 FGD6 -510623 sc-eQTL 3.41e-01 -0.0825 0.0864 0.318 intMono L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 9.81e-02 0.102 0.0614 0.318 intMono L2
ENSG00000028203 VEZT -510887 sc-eQTL 1.36e-01 0.134 0.0894 0.321 ncMono L2
ENSG00000057704 TMCC3 56302 sc-eQTL 3.04e-01 -0.0892 0.0866 0.321 ncMono L2
ENSG00000111142 METAP2 -766661 sc-eQTL 3.32e-01 -0.0917 0.0942 0.321 ncMono L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 8.12e-01 0.0223 0.0938 0.321 ncMono L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 1.11e-01 0.0951 0.0594 0.321 ncMono L2
ENSG00000173588 CEP83 246871 sc-eQTL 2.10e-01 -0.117 0.0931 0.321 ncMono L2
ENSG00000180263 FGD6 -510623 sc-eQTL 2.14e-01 0.11 0.0885 0.321 ncMono L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 8.46e-01 0.0153 0.079 0.321 ncMono L2
ENSG00000028203 VEZT -510887 sc-eQTL 6.27e-01 0.0468 0.0962 0.325 pDC L2
ENSG00000057704 TMCC3 56302 sc-eQTL 6.87e-01 -0.0378 0.0937 0.325 pDC L2
ENSG00000111142 METAP2 -766661 sc-eQTL 5.15e-01 -0.0641 0.0981 0.325 pDC L2
ENSG00000120798 NR2C1 -366769 sc-eQTL 8.75e-01 0.0153 0.0971 0.325 pDC L2
ENSG00000136040 PLXNC1 558282 sc-eQTL 1.90e-01 -0.122 0.0928 0.325 pDC L2
ENSG00000173588 CEP83 246871 sc-eQTL 6.25e-01 -0.0491 0.1 0.325 pDC L2
ENSG00000180263 FGD6 -510623 sc-eQTL 1.73e-01 -0.115 0.0839 0.325 pDC L2
ENSG00000184752 NDUFA12 -296889 sc-eQTL 3.13e-01 0.084 0.083 0.325 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -510887 sc-eQTL 6.84e-01 0.037 0.0908 0.316 B_Memory LOneK1K
ENSG00000057704 TMCC3 56302 sc-eQTL 9.65e-01 0.00424 0.0959 0.316 B_Memory LOneK1K
ENSG00000111142 METAP2 -766661 sc-eQTL 7.57e-01 -0.0262 0.0846 0.316 B_Memory LOneK1K
ENSG00000120798 NR2C1 -366769 sc-eQTL 1.87e-01 0.128 0.0968 0.316 B_Memory LOneK1K
ENSG00000136014 USP44 -844617 sc-eQTL 3.91e-01 0.0773 0.0898 0.316 B_Memory LOneK1K
ENSG00000136040 PLXNC1 558282 sc-eQTL 8.60e-01 -0.0102 0.058 0.316 B_Memory LOneK1K
ENSG00000173588 CEP83 246871 sc-eQTL 9.30e-01 0.00708 0.081 0.316 B_Memory LOneK1K
ENSG00000180263 FGD6 -510623 sc-eQTL 8.45e-01 -0.0157 0.0805 0.316 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -296889 sc-eQTL 5.87e-03 -0.152 0.0546 0.316 B_Memory LOneK1K
ENSG00000028203 VEZT -510887 sc-eQTL 8.74e-01 0.0135 0.0848 0.316 B_Naive LOneK1K
ENSG00000057704 TMCC3 56302 sc-eQTL 1.61e-01 0.12 0.0856 0.316 B_Naive LOneK1K
ENSG00000111142 METAP2 -766661 sc-eQTL 9.60e-01 0.00356 0.0708 0.316 B_Naive LOneK1K
ENSG00000120798 NR2C1 -366769 sc-eQTL 8.48e-01 0.0177 0.0921 0.316 B_Naive LOneK1K
ENSG00000136014 USP44 -844617 sc-eQTL 6.70e-02 -0.149 0.0811 0.316 B_Naive LOneK1K
ENSG00000136040 PLXNC1 558282 sc-eQTL 2.09e-01 0.0876 0.0696 0.316 B_Naive LOneK1K
ENSG00000173588 CEP83 246871 sc-eQTL 8.47e-01 0.014 0.0728 0.316 B_Naive LOneK1K
ENSG00000180263 FGD6 -510623 sc-eQTL 2.45e-01 0.104 0.0895 0.316 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -296889 sc-eQTL 3.95e-01 -0.0422 0.0495 0.316 B_Naive LOneK1K
ENSG00000028203 VEZT -510887 sc-eQTL 1.60e-01 0.116 0.0827 0.316 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 56302 sc-eQTL 3.54e-01 0.061 0.0657 0.316 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -766661 sc-eQTL 8.52e-01 -0.0133 0.071 0.316 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -366769 sc-eQTL 9.85e-01 -0.00145 0.0773 0.316 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 558282 sc-eQTL 3.26e-01 -0.0573 0.0582 0.316 CD14_Mono LOneK1K
ENSG00000173588 CEP83 246871 sc-eQTL 3.57e-01 -0.0733 0.0793 0.316 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -510623 sc-eQTL 9.02e-01 0.00884 0.0718 0.316 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -296889 sc-eQTL 3.57e-02 0.103 0.0488 0.316 CD14_Mono LOneK1K
ENSG00000028203 VEZT -510887 sc-eQTL 4.21e-02 0.189 0.0925 0.317 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 56302 sc-eQTL 3.09e-01 -0.0882 0.0864 0.317 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -766661 sc-eQTL 1.57e-01 -0.121 0.0852 0.317 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -366769 sc-eQTL 8.08e-01 0.0233 0.0958 0.317 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 558282 sc-eQTL 4.90e-01 0.0382 0.0552 0.317 CD16_Mono LOneK1K
ENSG00000173588 CEP83 246871 sc-eQTL 6.34e-01 -0.0438 0.0918 0.317 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -510623 sc-eQTL 6.69e-01 0.0336 0.0784 0.317 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -296889 sc-eQTL 1.90e-01 0.0819 0.0623 0.317 CD16_Mono LOneK1K
ENSG00000028203 VEZT -510887 sc-eQTL 7.53e-01 0.0267 0.0848 0.317 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 56302 sc-eQTL 2.28e-01 -0.0954 0.0789 0.317 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -766661 sc-eQTL 6.13e-01 -0.0343 0.0677 0.317 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -366769 sc-eQTL 9.39e-01 0.00586 0.0768 0.317 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 558282 sc-eQTL 3.67e-01 -0.0608 0.0672 0.317 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 246871 sc-eQTL 2.67e-01 -0.0841 0.0756 0.317 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -296889 sc-eQTL 8.16e-01 0.013 0.0557 0.317 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000057704 TMCC3 56302 eQTL 0.00324 -0.0423 0.0143 0.0 0.0 0.313
ENSG00000136014 USP44 -844617 eQTL 0.0389 0.0641 0.031 0.0 0.0 0.313
ENSG00000258303 AC012464.2 870692 eQTL 0.0286 0.0974 0.0444 0.0 0.0 0.313
ENSG00000258357 AC023161.2 184990 eQTL 0.0299 -0.0758 0.0348 0.0 0.0 0.313
ENSG00000258365 AC073655.2 424015 eQTL 0.0174 0.0872 0.0366 0.0 0.0 0.313

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000057704 TMCC3 56302 1.11e-05 1.27e-05 1.51e-06 6.74e-06 2.32e-06 5.21e-06 1.33e-05 2.15e-06 1.05e-05 5.43e-06 1.45e-05 6.66e-06 1.81e-05 4.15e-06 3.49e-06 6.68e-06 5.91e-06 8.54e-06 2.89e-06 2.84e-06 6.05e-06 1.07e-05 1.02e-05 3.41e-06 1.83e-05 4.49e-06 6.66e-06 4.89e-06 1.13e-05 9.11e-06 7.35e-06 1.03e-06 1.19e-06 3.29e-06 5.46e-06 2.65e-06 1.86e-06 1.91e-06 2.14e-06 1.03e-06 9.78e-07 1.36e-05 1.61e-06 2.07e-07 8.46e-07 1.78e-06 1.8e-06 7.39e-07 4.47e-07
ENSG00000136014 USP44 -844617 2.77e-07 1.33e-07 5.14e-08 2.05e-07 9.25e-08 9.91e-08 1.67e-07 5.48e-08 1.45e-07 6.08e-08 1.57e-07 1.15e-07 1.69e-07 7.37e-08 6.12e-08 7.49e-08 4.12e-08 1.27e-07 6.07e-08 4.78e-08 1.21e-07 1.24e-07 1.44e-07 2.79e-08 1.63e-07 1.21e-07 1.1e-07 1.01e-07 1.2e-07 1.07e-07 1.08e-07 3.66e-08 3.66e-08 8.23e-08 2.97e-08 2.99e-08 5.7e-08 8.71e-08 6.43e-08 6.19e-08 5.42e-08 1.46e-07 5.24e-08 1.43e-08 3.81e-08 1.87e-08 1.2e-07 1.88e-09 4.9e-08
ENSG00000258303 AC012464.2 870692 2.8e-07 1.36e-07 4.91e-08 2.05e-07 9.16e-08 9.9e-08 1.6e-07 5.43e-08 1.45e-07 5.67e-08 1.52e-07 1.08e-07 1.59e-07 7.13e-08 5.91e-08 7.36e-08 4.01e-08 1.27e-07 5.97e-08 4.3e-08 1.19e-07 1.24e-07 1.45e-07 2.91e-08 1.63e-07 1.14e-07 1.1e-07 9.92e-08 1.16e-07 1.03e-07 1.06e-07 3.99e-08 3.61e-08 8.11e-08 3.81e-08 3.28e-08 5.3e-08 8.63e-08 6.71e-08 5.56e-08 5.28e-08 1.4e-07 5.21e-08 1.09e-08 3.4e-08 1.84e-08 1.21e-07 3.79e-09 4.9e-08