Genes within 1Mb (chr12:94570479:A:AGT):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -647267 sc-eQTL 2.25e-01 -0.249 0.205 0.051 CD8_TCM L2
ENSG00000057704 TMCC3 -80078 sc-eQTL 8.58e-01 0.0285 0.158 0.051 CD8_TCM L2
ENSG00000111142 METAP2 -903041 sc-eQTL 4.97e-01 -0.142 0.208 0.051 CD8_TCM L2
ENSG00000120798 NR2C1 -503149 sc-eQTL 6.17e-01 0.105 0.21 0.051 CD8_TCM L2
ENSG00000136014 USP44 -980997 sc-eQTL 6.08e-01 -0.0965 0.188 0.051 CD8_TCM L2
ENSG00000136040 PLXNC1 421902 sc-eQTL 5.31e-01 -0.124 0.198 0.051 CD8_TCM L2
ENSG00000169372 CRADD 893104 sc-eQTL 7.84e-01 0.0575 0.21 0.051 CD8_TCM L2
ENSG00000173588 CEP83 110491 sc-eQTL 4.04e-03 0.58 0.199 0.051 CD8_TCM L2
ENSG00000184752 NDUFA12 -433269 sc-eQTL 8.65e-01 -0.0278 0.164 0.051 CD8_TCM L2
ENSG00000028203 VEZT -647267 sc-eQTL 2.20e-01 -0.246 0.2 0.051 cDC L2
ENSG00000057704 TMCC3 -80078 sc-eQTL 6.25e-01 0.106 0.216 0.051 cDC L2
ENSG00000111142 METAP2 -903041 sc-eQTL 8.44e-02 0.379 0.218 0.051 cDC L2
ENSG00000120798 NR2C1 -503149 sc-eQTL 6.60e-01 -0.0933 0.212 0.051 cDC L2
ENSG00000136040 PLXNC1 421902 sc-eQTL 4.82e-01 0.133 0.189 0.051 cDC L2
ENSG00000169372 CRADD 893104 sc-eQTL 3.70e-02 0.434 0.207 0.051 cDC L2
ENSG00000173588 CEP83 110491 sc-eQTL 5.28e-01 0.112 0.177 0.051 cDC L2
ENSG00000180263 FGD6 -647003 sc-eQTL 5.58e-01 0.12 0.204 0.051 cDC L2
ENSG00000184752 NDUFA12 -433269 sc-eQTL 5.61e-01 0.101 0.173 0.051 cDC L2
ENSG00000028203 VEZT -647267 sc-eQTL 8.34e-01 -0.0535 0.255 0.058 gdT L2
ENSG00000057704 TMCC3 -80078 sc-eQTL 6.76e-01 0.0818 0.195 0.058 gdT L2
ENSG00000111142 METAP2 -903041 sc-eQTL 7.76e-02 0.427 0.24 0.058 gdT L2
ENSG00000120798 NR2C1 -503149 sc-eQTL 7.56e-01 -0.0807 0.259 0.058 gdT L2
ENSG00000136040 PLXNC1 421902 sc-eQTL 9.70e-01 -0.00924 0.246 0.058 gdT L2
ENSG00000169372 CRADD 893104 sc-eQTL 1.96e-02 0.559 0.237 0.058 gdT L2
ENSG00000173588 CEP83 110491 sc-eQTL 2.67e-01 0.267 0.24 0.058 gdT L2
ENSG00000184752 NDUFA12 -433269 sc-eQTL 3.09e-01 0.213 0.208 0.058 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000173588 CEP83 110491 eQTL 1.36e-11 0.387 0.0566 0.246 0.237 0.0447


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000057704 \N -80078 0.000129 1.68e-05 5.11e-06 9.8e-06 2.38e-06 1.36e-05 2.2e-05 1.84e-06 1.31e-05 6.93e-06 1.6e-05 6.41e-06 2.55e-05 7.03e-06 5.5e-06 9.17e-06 1.36e-05 1.98e-05 4.15e-06 2.83e-06 8.57e-06 1.45e-05 2e-05 4.97e-06 2.77e-05 5.34e-06 7.6e-06 5.42e-06 1.66e-05 1.91e-05 8.77e-06 1.07e-06 1.28e-06 3.85e-06 6.94e-06 2.67e-06 1.8e-06 1.96e-06 2.01e-06 1.01e-06 1.04e-06 2.84e-05 4.92e-06 1.88e-07 2.45e-06 1.76e-06 2.11e-06 7.66e-07 4.28e-07
ENSG00000173588 CEP83 110491 0.00012 1.26e-05 4.1e-06 7.82e-06 2.25e-06 8.67e-06 1.51e-05 1.22e-06 9.63e-06 5.57e-06 1.24e-05 5.23e-06 1.85e-05 4.55e-06 5.09e-06 6.92e-06 9.43e-06 1.46e-05 3.32e-06 2.65e-06 6.93e-06 1.08e-05 1.39e-05 4.25e-06 2.05e-05 4.71e-06 5.97e-06 4.58e-06 1.25e-05 1.38e-05 6.24e-06 5.67e-07 8.76e-07 3.53e-06 5.48e-06 2.13e-06 1.71e-06 1.84e-06 2.16e-06 7.21e-07 7.81e-07 1.88e-05 3.74e-06 1.35e-07 2.07e-06 1.67e-06 1.7e-06 7.05e-07 6.22e-07
ENSG00000278916 \N 110476 0.00012 1.26e-05 4.1e-06 7.82e-06 2.25e-06 8.67e-06 1.51e-05 1.22e-06 9.63e-06 5.57e-06 1.24e-05 5.23e-06 1.85e-05 4.55e-06 5.09e-06 6.92e-06 9.43e-06 1.46e-05 3.32e-06 2.65e-06 6.93e-06 1.08e-05 1.39e-05 4.25e-06 2.05e-05 4.71e-06 5.97e-06 4.58e-06 1.25e-05 1.38e-05 6.24e-06 5.67e-07 8.76e-07 3.53e-06 5.48e-06 2.13e-06 1.71e-06 1.84e-06 2.16e-06 7.21e-07 7.81e-07 1.88e-05 3.74e-06 1.35e-07 2.07e-06 1.67e-06 1.7e-06 7.05e-07 6.22e-07