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Genes within 1Mb (chr12:93989686:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -660871 sc-eQTL 7.40e-01 0.028 0.0842 0.494 B L1
ENSG00000136040 PLXNC1 -158891 sc-eQTL 9.66e-01 -0.00205 0.0477 0.494 B L1
ENSG00000169372 CRADD 312311 sc-eQTL 4.30e-02 0.146 0.0715 0.494 B L1
ENSG00000173588 CEP83 -470302 sc-eQTL 4.15e-01 0.0491 0.0601 0.494 B L1
ENSG00000173598 NUDT4 611803 sc-eQTL 6.83e-01 -0.0219 0.0537 0.494 B L1
ENSG00000177889 UBE2N 547739 sc-eQTL 2.09e-01 -0.0595 0.0472 0.494 B L1
ENSG00000198015 MRPL42 522198 sc-eQTL 6.59e-01 -0.0327 0.0739 0.494 B L1
ENSG00000257345 LINC02413 990468 sc-eQTL 8.16e-01 0.0172 0.0736 0.494 B L1
ENSG00000120833 SOCS2 419872 sc-eQTL 3.25e-01 -0.0476 0.0483 0.494 CD4T L1
ENSG00000136040 PLXNC1 -158891 sc-eQTL 7.09e-01 -0.019 0.0508 0.494 CD4T L1
ENSG00000169372 CRADD 312311 sc-eQTL 4.10e-02 0.169 0.0824 0.494 CD4T L1
ENSG00000173588 CEP83 -470302 sc-eQTL 6.62e-01 0.0233 0.0532 0.494 CD4T L1
ENSG00000173598 NUDT4 611803 sc-eQTL 2.23e-01 -0.0585 0.0479 0.494 CD4T L1
ENSG00000177889 UBE2N 547739 sc-eQTL 9.54e-01 0.00258 0.0446 0.494 CD4T L1
ENSG00000198015 MRPL42 522198 sc-eQTL 6.16e-01 0.0389 0.0775 0.494 CD4T L1
ENSG00000057704 TMCC3 -660871 sc-eQTL 5.31e-01 0.0302 0.0481 0.494 CD8T L1
ENSG00000120833 SOCS2 419872 sc-eQTL 2.28e-01 0.0776 0.0642 0.494 CD8T L1
ENSG00000136040 PLXNC1 -158891 sc-eQTL 2.06e-01 -0.0838 0.066 0.494 CD8T L1
ENSG00000169372 CRADD 312311 sc-eQTL 7.12e-01 -0.0288 0.078 0.494 CD8T L1
ENSG00000173588 CEP83 -470302 sc-eQTL 3.49e-01 -0.058 0.0618 0.494 CD8T L1
ENSG00000173598 NUDT4 611803 sc-eQTL 7.15e-02 -0.0831 0.0459 0.494 CD8T L1
ENSG00000177889 UBE2N 547739 sc-eQTL 5.06e-01 -0.0384 0.0575 0.494 CD8T L1
ENSG00000198015 MRPL42 522198 sc-eQTL 6.71e-01 0.0349 0.082 0.494 CD8T L1
ENSG00000057704 TMCC3 -660871 sc-eQTL 9.94e-01 -0.000718 0.092 0.489 DC L1
ENSG00000136040 PLXNC1 -158891 sc-eQTL 1.76e-01 -0.111 0.082 0.489 DC L1
ENSG00000169372 CRADD 312311 sc-eQTL 7.84e-01 -0.0255 0.093 0.489 DC L1
ENSG00000173588 CEP83 -470302 sc-eQTL 2.57e-01 0.0832 0.0731 0.489 DC L1
ENSG00000173598 NUDT4 611803 sc-eQTL 4.74e-01 0.0548 0.0764 0.489 DC L1
ENSG00000177889 UBE2N 547739 sc-eQTL 8.62e-01 -0.0134 0.0772 0.489 DC L1
ENSG00000198015 MRPL42 522198 sc-eQTL 7.79e-01 0.0249 0.0887 0.489 DC L1
ENSG00000057704 TMCC3 -660871 sc-eQTL 7.49e-02 0.11 0.0615 0.494 Mono L1
ENSG00000136040 PLXNC1 -158891 sc-eQTL 6.81e-01 -0.0212 0.0514 0.494 Mono L1
ENSG00000169372 CRADD 312311 sc-eQTL 6.26e-01 0.0462 0.0946 0.494 Mono L1
ENSG00000173588 CEP83 -470302 sc-eQTL 7.58e-01 -0.0234 0.076 0.494 Mono L1
ENSG00000173598 NUDT4 611803 sc-eQTL 1.89e-01 -0.0856 0.065 0.494 Mono L1
ENSG00000177889 UBE2N 547739 sc-eQTL 7.87e-01 0.0132 0.049 0.494 Mono L1
ENSG00000198015 MRPL42 522198 sc-eQTL 1.04e-01 0.107 0.0655 0.494 Mono L1
ENSG00000057704 TMCC3 -660871 sc-eQTL 7.06e-01 0.0281 0.0746 0.491 NK L1
ENSG00000120833 SOCS2 419872 sc-eQTL 3.01e-01 0.0605 0.0584 0.491 NK L1
ENSG00000136040 PLXNC1 -158891 sc-eQTL 6.30e-01 -0.0295 0.0611 0.491 NK L1
ENSG00000169372 CRADD 312311 sc-eQTL 6.82e-01 -0.036 0.0877 0.491 NK L1
ENSG00000173588 CEP83 -470302 sc-eQTL 1.98e-01 -0.0892 0.0692 0.491 NK L1
ENSG00000173598 NUDT4 611803 sc-eQTL 8.36e-02 -0.098 0.0564 0.491 NK L1
ENSG00000177889 UBE2N 547739 sc-eQTL 8.48e-01 0.0108 0.0562 0.491 NK L1
ENSG00000198015 MRPL42 522198 sc-eQTL 5.27e-01 0.0509 0.0802 0.491 NK L1
ENSG00000246985 SOCS2-AS1 417918 sc-eQTL 7.04e-01 0.0348 0.0914 0.491 NK L1
ENSG00000057704 TMCC3 -660871 sc-eQTL 5.07e-01 -0.0508 0.0765 0.494 Other_T L1
ENSG00000120833 SOCS2 419872 sc-eQTL 6.55e-01 0.0338 0.0755 0.494 Other_T L1
ENSG00000136040 PLXNC1 -158891 sc-eQTL 3.82e-01 -0.062 0.0707 0.494 Other_T L1
ENSG00000169372 CRADD 312311 sc-eQTL 1.98e-01 -0.11 0.0853 0.494 Other_T L1
ENSG00000173588 CEP83 -470302 sc-eQTL 9.08e-01 -0.00921 0.0797 0.494 Other_T L1
ENSG00000173598 NUDT4 611803 sc-eQTL 5.26e-01 0.0388 0.0611 0.494 Other_T L1
ENSG00000177889 UBE2N 547739 sc-eQTL 9.82e-02 -0.0936 0.0564 0.494 Other_T L1
ENSG00000198015 MRPL42 522198 sc-eQTL 5.35e-01 -0.0417 0.067 0.494 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -660871 sc-eQTL 8.14e-01 -0.0203 0.0863 0.5 B_Activated L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 6.45e-01 0.0376 0.0815 0.5 B_Activated L2
ENSG00000169372 CRADD 312311 sc-eQTL 4.14e-01 0.0782 0.0955 0.5 B_Activated L2
ENSG00000173588 CEP83 -470302 sc-eQTL 4.72e-01 -0.0731 0.101 0.5 B_Activated L2
ENSG00000173598 NUDT4 611803 sc-eQTL 1.27e-01 -0.13 0.0846 0.5 B_Activated L2
ENSG00000177889 UBE2N 547739 sc-eQTL 3.31e-01 0.103 0.105 0.5 B_Activated L2
ENSG00000198015 MRPL42 522198 sc-eQTL 6.50e-01 -0.0465 0.102 0.5 B_Activated L2
ENSG00000257345 LINC02413 990468 sc-eQTL 6.30e-01 0.048 0.0993 0.5 B_Activated L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 5.81e-01 0.0485 0.0877 0.494 B_Intermediate L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 9.95e-01 -0.000474 0.0738 0.494 B_Intermediate L2
ENSG00000169372 CRADD 312311 sc-eQTL 5.09e-01 0.0579 0.0877 0.494 B_Intermediate L2
ENSG00000173588 CEP83 -470302 sc-eQTL 8.29e-01 0.0177 0.0818 0.494 B_Intermediate L2
ENSG00000173598 NUDT4 611803 sc-eQTL 5.01e-01 -0.0492 0.0731 0.494 B_Intermediate L2
ENSG00000177889 UBE2N 547739 sc-eQTL 2.19e-01 -0.0914 0.0742 0.494 B_Intermediate L2
ENSG00000198015 MRPL42 522198 sc-eQTL 2.91e-01 0.0959 0.0905 0.494 B_Intermediate L2
ENSG00000257345 LINC02413 990468 sc-eQTL 4.87e-01 0.0622 0.0894 0.494 B_Intermediate L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 1.85e-02 0.215 0.0907 0.494 B_Memory L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 6.61e-01 0.0312 0.0711 0.494 B_Memory L2
ENSG00000169372 CRADD 312311 sc-eQTL 8.81e-01 0.0139 0.093 0.494 B_Memory L2
ENSG00000173588 CEP83 -470302 sc-eQTL 4.36e-02 -0.167 0.0822 0.494 B_Memory L2
ENSG00000173598 NUDT4 611803 sc-eQTL 9.85e-01 -0.00123 0.0667 0.494 B_Memory L2
ENSG00000177889 UBE2N 547739 sc-eQTL 2.45e-01 -0.0693 0.0594 0.494 B_Memory L2
ENSG00000198015 MRPL42 522198 sc-eQTL 7.59e-01 0.0273 0.0886 0.494 B_Memory L2
ENSG00000257345 LINC02413 990468 sc-eQTL 2.72e-01 -0.0972 0.0883 0.494 B_Memory L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 1.40e-01 -0.126 0.0852 0.494 B_Naive1 L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 7.86e-01 0.0198 0.0727 0.494 B_Naive1 L2
ENSG00000169372 CRADD 312311 sc-eQTL 7.46e-02 0.162 0.0906 0.494 B_Naive1 L2
ENSG00000173588 CEP83 -470302 sc-eQTL 8.12e-01 0.0179 0.0751 0.494 B_Naive1 L2
ENSG00000173598 NUDT4 611803 sc-eQTL 8.08e-01 -0.0159 0.0653 0.494 B_Naive1 L2
ENSG00000177889 UBE2N 547739 sc-eQTL 6.76e-01 0.0294 0.0702 0.494 B_Naive1 L2
ENSG00000198015 MRPL42 522198 sc-eQTL 9.91e-01 -0.000935 0.0811 0.494 B_Naive1 L2
ENSG00000257345 LINC02413 990468 sc-eQTL 6.29e-01 -0.0416 0.086 0.494 B_Naive1 L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 1.30e-01 0.127 0.0837 0.491 B_Naive2 L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 7.05e-01 0.0298 0.0787 0.491 B_Naive2 L2
ENSG00000169372 CRADD 312311 sc-eQTL 3.09e-01 0.0902 0.0885 0.491 B_Naive2 L2
ENSG00000173588 CEP83 -470302 sc-eQTL 1.87e-01 0.11 0.0828 0.491 B_Naive2 L2
ENSG00000173598 NUDT4 611803 sc-eQTL 4.62e-01 0.054 0.0732 0.491 B_Naive2 L2
ENSG00000177889 UBE2N 547739 sc-eQTL 2.90e-01 -0.0759 0.0715 0.491 B_Naive2 L2
ENSG00000198015 MRPL42 522198 sc-eQTL 3.69e-01 -0.0836 0.0928 0.491 B_Naive2 L2
ENSG00000257345 LINC02413 990468 sc-eQTL 3.31e-01 -0.0869 0.0891 0.491 B_Naive2 L2
ENSG00000120833 SOCS2 419872 sc-eQTL 4.18e-01 0.0734 0.0905 0.484 CD4_CTL L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 9.71e-01 0.00319 0.0864 0.484 CD4_CTL L2
ENSG00000169372 CRADD 312311 sc-eQTL 7.43e-01 -0.0288 0.0876 0.484 CD4_CTL L2
ENSG00000173588 CEP83 -470302 sc-eQTL 6.84e-01 0.036 0.0883 0.484 CD4_CTL L2
ENSG00000173598 NUDT4 611803 sc-eQTL 1.64e-01 -0.119 0.0854 0.484 CD4_CTL L2
ENSG00000177889 UBE2N 547739 sc-eQTL 2.80e-01 -0.0946 0.0874 0.484 CD4_CTL L2
ENSG00000198015 MRPL42 522198 sc-eQTL 8.15e-01 -0.0229 0.0979 0.484 CD4_CTL L2
ENSG00000120833 SOCS2 419872 sc-eQTL 7.88e-02 -0.0882 0.0499 0.494 CD4_Naive L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 9.84e-01 0.00115 0.0569 0.494 CD4_Naive L2
ENSG00000169372 CRADD 312311 sc-eQTL 1.82e-02 0.204 0.0857 0.494 CD4_Naive L2
ENSG00000173588 CEP83 -470302 sc-eQTL 5.36e-01 0.0381 0.0615 0.494 CD4_Naive L2
ENSG00000173598 NUDT4 611803 sc-eQTL 2.97e-01 -0.0532 0.0509 0.494 CD4_Naive L2
ENSG00000177889 UBE2N 547739 sc-eQTL 4.00e-01 0.0412 0.0489 0.494 CD4_Naive L2
ENSG00000198015 MRPL42 522198 sc-eQTL 7.11e-01 0.0305 0.0822 0.494 CD4_Naive L2
ENSG00000120833 SOCS2 419872 sc-eQTL 8.98e-01 -0.00739 0.0575 0.494 CD4_TCM L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 8.58e-01 -0.0122 0.0683 0.494 CD4_TCM L2
ENSG00000169372 CRADD 312311 sc-eQTL 7.65e-01 -0.0276 0.0921 0.494 CD4_TCM L2
ENSG00000173588 CEP83 -470302 sc-eQTL 6.79e-01 -0.0302 0.0728 0.494 CD4_TCM L2
ENSG00000173598 NUDT4 611803 sc-eQTL 7.61e-01 -0.0176 0.0578 0.494 CD4_TCM L2
ENSG00000177889 UBE2N 547739 sc-eQTL 9.91e-01 -0.000643 0.0555 0.494 CD4_TCM L2
ENSG00000198015 MRPL42 522198 sc-eQTL 2.85e-01 0.0906 0.0845 0.494 CD4_TCM L2
ENSG00000120833 SOCS2 419872 sc-eQTL 1.78e-01 0.0835 0.0618 0.494 CD4_TEM L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 5.17e-01 -0.0483 0.0743 0.494 CD4_TEM L2
ENSG00000169372 CRADD 312311 sc-eQTL 2.04e-01 0.116 0.0912 0.494 CD4_TEM L2
ENSG00000173588 CEP83 -470302 sc-eQTL 1.32e-02 0.206 0.0823 0.494 CD4_TEM L2
ENSG00000173598 NUDT4 611803 sc-eQTL 6.23e-01 -0.0356 0.0722 0.494 CD4_TEM L2
ENSG00000177889 UBE2N 547739 sc-eQTL 5.37e-03 -0.205 0.0729 0.494 CD4_TEM L2
ENSG00000198015 MRPL42 522198 sc-eQTL 3.43e-01 0.0773 0.0814 0.494 CD4_TEM L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 5.88e-01 0.0392 0.0723 0.494 CD8_CTL L2
ENSG00000120833 SOCS2 419872 sc-eQTL 7.30e-01 -0.0252 0.0731 0.494 CD8_CTL L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 6.77e-01 0.031 0.0742 0.494 CD8_CTL L2
ENSG00000169372 CRADD 312311 sc-eQTL 5.29e-01 -0.0568 0.0901 0.494 CD8_CTL L2
ENSG00000173588 CEP83 -470302 sc-eQTL 9.61e-02 -0.136 0.0812 0.494 CD8_CTL L2
ENSG00000173598 NUDT4 611803 sc-eQTL 3.66e-01 -0.0604 0.0667 0.494 CD8_CTL L2
ENSG00000177889 UBE2N 547739 sc-eQTL 2.84e-01 0.0831 0.0774 0.494 CD8_CTL L2
ENSG00000198015 MRPL42 522198 sc-eQTL 7.04e-01 0.0338 0.0889 0.494 CD8_CTL L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 3.08e-01 0.0679 0.0665 0.494 CD8_Naive L2
ENSG00000120833 SOCS2 419872 sc-eQTL 4.42e-02 0.14 0.0692 0.494 CD8_Naive L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 1.34e-01 -0.117 0.0778 0.494 CD8_Naive L2
ENSG00000169372 CRADD 312311 sc-eQTL 6.97e-01 -0.0353 0.0905 0.494 CD8_Naive L2
ENSG00000173588 CEP83 -470302 sc-eQTL 9.55e-01 -0.00422 0.0754 0.494 CD8_Naive L2
ENSG00000173598 NUDT4 611803 sc-eQTL 9.11e-02 -0.106 0.0622 0.494 CD8_Naive L2
ENSG00000177889 UBE2N 547739 sc-eQTL 1.25e-01 -0.105 0.0679 0.494 CD8_Naive L2
ENSG00000198015 MRPL42 522198 sc-eQTL 1.74e-01 0.119 0.0868 0.494 CD8_Naive L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 7.10e-01 0.0267 0.0717 0.488 CD8_TCM L2
ENSG00000120833 SOCS2 419872 sc-eQTL 9.46e-01 -0.00543 0.0799 0.488 CD8_TCM L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 5.36e-03 -0.248 0.088 0.488 CD8_TCM L2
ENSG00000169372 CRADD 312311 sc-eQTL 9.72e-01 -0.00328 0.0949 0.488 CD8_TCM L2
ENSG00000173588 CEP83 -470302 sc-eQTL 1.90e-01 0.121 0.0918 0.488 CD8_TCM L2
ENSG00000173598 NUDT4 611803 sc-eQTL 4.65e-01 -0.0551 0.0753 0.488 CD8_TCM L2
ENSG00000177889 UBE2N 547739 sc-eQTL 2.87e-02 -0.195 0.0886 0.488 CD8_TCM L2
ENSG00000198015 MRPL42 522198 sc-eQTL 8.94e-01 0.0122 0.0919 0.488 CD8_TCM L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 5.30e-01 -0.0493 0.0784 0.486 CD8_TEM L2
ENSG00000120833 SOCS2 419872 sc-eQTL 1.39e-01 0.124 0.0832 0.486 CD8_TEM L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 9.50e-01 0.00558 0.0881 0.486 CD8_TEM L2
ENSG00000169372 CRADD 312311 sc-eQTL 3.89e-01 -0.0805 0.0932 0.486 CD8_TEM L2
ENSG00000173588 CEP83 -470302 sc-eQTL 3.37e-01 -0.0872 0.0907 0.486 CD8_TEM L2
ENSG00000173598 NUDT4 611803 sc-eQTL 9.67e-01 -0.00356 0.0859 0.486 CD8_TEM L2
ENSG00000177889 UBE2N 547739 sc-eQTL 1.75e-01 0.111 0.0817 0.486 CD8_TEM L2
ENSG00000198015 MRPL42 522198 sc-eQTL 7.28e-01 0.0296 0.085 0.486 CD8_TEM L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 1.25e-01 0.116 0.0755 0.491 MAIT L2
ENSG00000120833 SOCS2 419872 sc-eQTL 8.79e-01 0.0123 0.0808 0.491 MAIT L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 2.00e-01 -0.0952 0.0741 0.491 MAIT L2
ENSG00000169372 CRADD 312311 sc-eQTL 3.65e-01 -0.0857 0.0944 0.491 MAIT L2
ENSG00000173588 CEP83 -470302 sc-eQTL 2.99e-01 -0.0885 0.085 0.491 MAIT L2
ENSG00000173598 NUDT4 611803 sc-eQTL 4.96e-01 -0.0468 0.0686 0.491 MAIT L2
ENSG00000177889 UBE2N 547739 sc-eQTL 3.52e-01 -0.0785 0.0841 0.491 MAIT L2
ENSG00000198015 MRPL42 522198 sc-eQTL 2.76e-01 -0.0937 0.0858 0.491 MAIT L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 4.06e-01 -0.0746 0.0895 0.489 NK_CD56bright L2
ENSG00000120833 SOCS2 419872 sc-eQTL 8.24e-02 0.141 0.0808 0.489 NK_CD56bright L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 2.32e-01 0.0947 0.079 0.489 NK_CD56bright L2
ENSG00000169372 CRADD 312311 sc-eQTL 5.52e-01 0.0573 0.0963 0.489 NK_CD56bright L2
ENSG00000173588 CEP83 -470302 sc-eQTL 7.31e-01 -0.0276 0.0802 0.489 NK_CD56bright L2
ENSG00000173598 NUDT4 611803 sc-eQTL 7.92e-01 -0.0227 0.0858 0.489 NK_CD56bright L2
ENSG00000177889 UBE2N 547739 sc-eQTL 7.22e-01 0.0325 0.0911 0.489 NK_CD56bright L2
ENSG00000198015 MRPL42 522198 sc-eQTL 5.12e-01 0.0595 0.0907 0.489 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 417918 sc-eQTL 1.93e-01 0.11 0.0842 0.489 NK_CD56bright L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 9.75e-01 0.00239 0.0773 0.489 NK_CD56dim L2
ENSG00000120833 SOCS2 419872 sc-eQTL 7.07e-01 -0.0248 0.0659 0.489 NK_CD56dim L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 8.92e-01 -0.00976 0.0717 0.489 NK_CD56dim L2
ENSG00000169372 CRADD 312311 sc-eQTL 9.45e-01 -0.0065 0.0934 0.489 NK_CD56dim L2
ENSG00000173588 CEP83 -470302 sc-eQTL 2.15e-02 -0.19 0.0819 0.489 NK_CD56dim L2
ENSG00000173598 NUDT4 611803 sc-eQTL 4.81e-01 -0.0467 0.0661 0.489 NK_CD56dim L2
ENSG00000177889 UBE2N 547739 sc-eQTL 6.76e-01 0.0266 0.0636 0.489 NK_CD56dim L2
ENSG00000198015 MRPL42 522198 sc-eQTL 5.27e-01 0.0558 0.088 0.489 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 417918 sc-eQTL 4.11e-01 -0.0745 0.0905 0.489 NK_CD56dim L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 8.30e-01 0.0187 0.0866 0.489 NK_HLA L2
ENSG00000120833 SOCS2 419872 sc-eQTL 5.10e-01 0.0567 0.0858 0.489 NK_HLA L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 4.51e-01 -0.0592 0.0784 0.489 NK_HLA L2
ENSG00000169372 CRADD 312311 sc-eQTL 6.09e-01 -0.0493 0.0961 0.489 NK_HLA L2
ENSG00000173588 CEP83 -470302 sc-eQTL 7.05e-02 0.163 0.0894 0.489 NK_HLA L2
ENSG00000173598 NUDT4 611803 sc-eQTL 3.81e-01 -0.0705 0.0802 0.489 NK_HLA L2
ENSG00000177889 UBE2N 547739 sc-eQTL 5.81e-01 -0.0497 0.09 0.489 NK_HLA L2
ENSG00000198015 MRPL42 522198 sc-eQTL 8.17e-01 -0.0233 0.1 0.489 NK_HLA L2
ENSG00000246985 SOCS2-AS1 417918 sc-eQTL 4.74e-01 0.0581 0.0811 0.489 NK_HLA L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 7.01e-01 0.0321 0.0835 0.489 NK_cytokine L2
ENSG00000120833 SOCS2 419872 sc-eQTL 1.03e-01 0.119 0.0725 0.489 NK_cytokine L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 9.51e-01 0.00458 0.074 0.489 NK_cytokine L2
ENSG00000169372 CRADD 312311 sc-eQTL 6.90e-01 -0.0331 0.0827 0.489 NK_cytokine L2
ENSG00000173588 CEP83 -470302 sc-eQTL 8.06e-01 0.0209 0.085 0.489 NK_cytokine L2
ENSG00000173598 NUDT4 611803 sc-eQTL 4.51e-01 -0.0491 0.0649 0.489 NK_cytokine L2
ENSG00000177889 UBE2N 547739 sc-eQTL 9.50e-01 -0.00473 0.0748 0.489 NK_cytokine L2
ENSG00000198015 MRPL42 522198 sc-eQTL 5.87e-01 0.0471 0.0866 0.489 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 417918 sc-eQTL 4.67e-01 0.0631 0.0865 0.489 NK_cytokine L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 8.40e-01 0.0203 0.1 0.537 PB L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 2.42e-01 0.12 0.102 0.537 PB L2
ENSG00000169372 CRADD 312311 sc-eQTL 2.70e-01 -0.104 0.0941 0.537 PB L2
ENSG00000173588 CEP83 -470302 sc-eQTL 1.83e-01 0.142 0.106 0.537 PB L2
ENSG00000173598 NUDT4 611803 sc-eQTL 5.35e-01 -0.0549 0.0883 0.537 PB L2
ENSG00000177889 UBE2N 547739 sc-eQTL 3.07e-01 -0.0796 0.0775 0.537 PB L2
ENSG00000198015 MRPL42 522198 sc-eQTL 4.03e-01 -0.0896 0.107 0.537 PB L2
ENSG00000257345 LINC02413 990468 sc-eQTL 1.48e-01 0.15 0.103 0.537 PB L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 6.75e-01 -0.0322 0.0766 0.493 Pro_T L2
ENSG00000120833 SOCS2 419872 sc-eQTL 3.83e-01 -0.0716 0.0818 0.493 Pro_T L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 5.64e-01 -0.0503 0.0871 0.493 Pro_T L2
ENSG00000169372 CRADD 312311 sc-eQTL 6.09e-01 -0.0435 0.0851 0.493 Pro_T L2
ENSG00000173588 CEP83 -470302 sc-eQTL 7.89e-01 0.0232 0.0863 0.493 Pro_T L2
ENSG00000173598 NUDT4 611803 sc-eQTL 2.00e-01 0.0884 0.0687 0.493 Pro_T L2
ENSG00000177889 UBE2N 547739 sc-eQTL 5.25e-01 -0.0404 0.0636 0.493 Pro_T L2
ENSG00000198015 MRPL42 522198 sc-eQTL 7.63e-01 -0.023 0.0764 0.493 Pro_T L2
ENSG00000120833 SOCS2 419872 sc-eQTL 8.98e-01 0.00988 0.0766 0.494 Treg L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 3.78e-01 -0.0712 0.0807 0.494 Treg L2
ENSG00000169372 CRADD 312311 sc-eQTL 8.78e-01 0.0144 0.0933 0.494 Treg L2
ENSG00000173588 CEP83 -470302 sc-eQTL 7.65e-01 -0.0259 0.0865 0.494 Treg L2
ENSG00000173598 NUDT4 611803 sc-eQTL 6.69e-01 -0.0283 0.0661 0.494 Treg L2
ENSG00000177889 UBE2N 547739 sc-eQTL 7.00e-02 0.129 0.0708 0.494 Treg L2
ENSG00000198015 MRPL42 522198 sc-eQTL 9.70e-01 0.00336 0.0897 0.494 Treg L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 5.64e-01 0.0573 0.0991 0.48 cDC L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 7.03e-01 -0.0331 0.0866 0.48 cDC L2
ENSG00000169372 CRADD 312311 sc-eQTL 8.16e-01 0.0223 0.0958 0.48 cDC L2
ENSG00000173588 CEP83 -470302 sc-eQTL 3.20e-01 0.0808 0.081 0.48 cDC L2
ENSG00000173598 NUDT4 611803 sc-eQTL 6.90e-01 -0.0389 0.0973 0.48 cDC L2
ENSG00000177889 UBE2N 547739 sc-eQTL 4.74e-01 0.0606 0.0845 0.48 cDC L2
ENSG00000198015 MRPL42 522198 sc-eQTL 7.10e-01 -0.0362 0.097 0.48 cDC L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 2.72e-01 0.0771 0.07 0.494 cMono_IL1B L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 4.10e-01 -0.0511 0.0618 0.494 cMono_IL1B L2
ENSG00000169372 CRADD 312311 sc-eQTL 5.18e-01 -0.0595 0.0919 0.494 cMono_IL1B L2
ENSG00000173588 CEP83 -470302 sc-eQTL 2.25e-01 -0.102 0.0841 0.494 cMono_IL1B L2
ENSG00000173598 NUDT4 611803 sc-eQTL 8.80e-01 -0.0102 0.0674 0.494 cMono_IL1B L2
ENSG00000177889 UBE2N 547739 sc-eQTL 2.04e-01 0.0671 0.0526 0.494 cMono_IL1B L2
ENSG00000198015 MRPL42 522198 sc-eQTL 5.41e-01 0.0448 0.0732 0.494 cMono_IL1B L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 5.77e-01 0.0445 0.0796 0.494 cMono_S100A L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 9.22e-01 -0.0064 0.065 0.494 cMono_S100A L2
ENSG00000169372 CRADD 312311 sc-eQTL 5.20e-01 0.064 0.0993 0.494 cMono_S100A L2
ENSG00000173588 CEP83 -470302 sc-eQTL 3.28e-01 0.0898 0.0916 0.494 cMono_S100A L2
ENSG00000173598 NUDT4 611803 sc-eQTL 3.95e-01 -0.0665 0.078 0.494 cMono_S100A L2
ENSG00000177889 UBE2N 547739 sc-eQTL 7.60e-01 -0.0208 0.068 0.494 cMono_S100A L2
ENSG00000198015 MRPL42 522198 sc-eQTL 3.85e-01 0.0678 0.0779 0.494 cMono_S100A L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 1.61e-02 -0.207 0.0849 0.491 gdT L2
ENSG00000120833 SOCS2 419872 sc-eQTL 8.36e-01 0.0216 0.104 0.491 gdT L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 1.13e-01 0.173 0.108 0.491 gdT L2
ENSG00000169372 CRADD 312311 sc-eQTL 2.60e-02 -0.237 0.105 0.491 gdT L2
ENSG00000173588 CEP83 -470302 sc-eQTL 9.88e-01 -0.00155 0.107 0.491 gdT L2
ENSG00000173598 NUDT4 611803 sc-eQTL 2.73e-02 0.223 0.1 0.491 gdT L2
ENSG00000177889 UBE2N 547739 sc-eQTL 9.56e-01 0.00619 0.111 0.491 gdT L2
ENSG00000198015 MRPL42 522198 sc-eQTL 6.93e-01 -0.0429 0.109 0.491 gdT L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 8.19e-01 -0.0217 0.0946 0.493 intMono L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 2.19e-01 0.0981 0.0795 0.493 intMono L2
ENSG00000169372 CRADD 312311 sc-eQTL 5.18e-01 0.0595 0.0919 0.493 intMono L2
ENSG00000173588 CEP83 -470302 sc-eQTL 9.29e-01 -0.00853 0.0961 0.493 intMono L2
ENSG00000173598 NUDT4 611803 sc-eQTL 5.89e-01 -0.0452 0.0837 0.493 intMono L2
ENSG00000177889 UBE2N 547739 sc-eQTL 6.10e-01 -0.0407 0.0797 0.493 intMono L2
ENSG00000198015 MRPL42 522198 sc-eQTL 7.50e-01 0.0273 0.0858 0.493 intMono L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 1.42e-01 0.125 0.0844 0.491 ncMono L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 8.19e-01 -0.0134 0.0584 0.491 ncMono L2
ENSG00000169372 CRADD 312311 sc-eQTL 1.24e-01 0.14 0.0905 0.491 ncMono L2
ENSG00000173588 CEP83 -470302 sc-eQTL 1.31e-01 -0.138 0.0908 0.491 ncMono L2
ENSG00000173598 NUDT4 611803 sc-eQTL 6.08e-01 -0.0411 0.0799 0.491 ncMono L2
ENSG00000177889 UBE2N 547739 sc-eQTL 8.92e-02 0.132 0.0774 0.491 ncMono L2
ENSG00000198015 MRPL42 522198 sc-eQTL 7.04e-01 0.0307 0.0808 0.491 ncMono L2
ENSG00000057704 TMCC3 -660871 sc-eQTL 6.55e-01 0.044 0.0984 0.477 pDC L2
ENSG00000136040 PLXNC1 -158891 sc-eQTL 2.58e-01 -0.111 0.0976 0.477 pDC L2
ENSG00000169372 CRADD 312311 sc-eQTL 3.61e-01 0.0907 0.0989 0.477 pDC L2
ENSG00000173588 CEP83 -470302 sc-eQTL 5.82e-01 -0.0581 0.105 0.477 pDC L2
ENSG00000173598 NUDT4 611803 sc-eQTL 3.43e-01 0.0809 0.0851 0.477 pDC L2
ENSG00000177889 UBE2N 547739 sc-eQTL 8.95e-01 -0.0133 0.101 0.477 pDC L2
ENSG00000198015 MRPL42 522198 sc-eQTL 3.81e-01 -0.0918 0.104 0.477 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -660871 sc-eQTL 5.29e-01 0.0573 0.0908 0.494 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -158891 sc-eQTL 8.30e-01 0.0118 0.055 0.494 B_Memory LOneK1K
ENSG00000169372 CRADD 312311 sc-eQTL 2.74e-01 0.102 0.0933 0.494 B_Memory LOneK1K
ENSG00000173588 CEP83 -470302 sc-eQTL 3.60e-01 -0.0703 0.0766 0.494 B_Memory LOneK1K
ENSG00000173598 NUDT4 611803 sc-eQTL 6.98e-01 -0.0215 0.0553 0.494 B_Memory LOneK1K
ENSG00000177889 UBE2N 547739 sc-eQTL 1.74e-01 -0.0684 0.0502 0.494 B_Memory LOneK1K
ENSG00000198015 MRPL42 522198 sc-eQTL 3.53e-01 0.0764 0.082 0.494 B_Memory LOneK1K
ENSG00000257345 LINC02413 990468 sc-eQTL 4.20e-01 0.0691 0.0855 0.494 B_Memory LOneK1K
ENSG00000057704 TMCC3 -660871 sc-eQTL 9.16e-01 -0.00865 0.082 0.494 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -158891 sc-eQTL 6.23e-01 0.0327 0.0665 0.494 B_Naive LOneK1K
ENSG00000169372 CRADD 312311 sc-eQTL 6.36e-02 0.163 0.0876 0.494 B_Naive LOneK1K
ENSG00000173588 CEP83 -470302 sc-eQTL 3.57e-01 0.0639 0.0693 0.494 B_Naive LOneK1K
ENSG00000173598 NUDT4 611803 sc-eQTL 8.16e-01 0.015 0.0644 0.494 B_Naive LOneK1K
ENSG00000177889 UBE2N 547739 sc-eQTL 7.53e-01 -0.0208 0.0661 0.494 B_Naive LOneK1K
ENSG00000198015 MRPL42 522198 sc-eQTL 7.86e-01 -0.0221 0.0813 0.494 B_Naive LOneK1K
ENSG00000257345 LINC02413 990468 sc-eQTL 4.25e-01 -0.0667 0.0835 0.494 B_Naive LOneK1K
ENSG00000057704 TMCC3 -660871 sc-eQTL 2.86e-01 0.0684 0.0639 0.494 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -158891 sc-eQTL 6.67e-01 -0.0245 0.0568 0.494 CD14_Mono LOneK1K
ENSG00000169372 CRADD 312311 sc-eQTL 8.49e-01 -0.0175 0.0916 0.494 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -470302 sc-eQTL 8.96e-01 -0.0101 0.0774 0.494 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 611803 sc-eQTL 2.06e-01 -0.0829 0.0654 0.494 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 547739 sc-eQTL 9.60e-01 -0.00249 0.0494 0.494 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 522198 sc-eQTL 1.70e-01 0.0938 0.0682 0.494 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 -660871 sc-eQTL 3.99e-01 0.0718 0.085 0.494 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -158891 sc-eQTL 6.21e-01 0.0268 0.0543 0.494 CD16_Mono LOneK1K
ENSG00000169372 CRADD 312311 sc-eQTL 1.14e-01 0.155 0.0975 0.494 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -470302 sc-eQTL 5.67e-01 -0.0517 0.0901 0.494 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 611803 sc-eQTL 7.54e-01 0.023 0.0734 0.494 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 547739 sc-eQTL 3.06e-01 0.0753 0.0733 0.494 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 522198 sc-eQTL 2.26e-01 0.0937 0.0772 0.494 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 -660871 sc-eQTL 8.57e-01 0.0137 0.0762 0.489 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 419872 sc-eQTL 2.31e-01 0.071 0.0591 0.489 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -158891 sc-eQTL 4.45e-01 -0.0495 0.0648 0.489 NK_CD56dim LOneK1K
ENSG00000169372 CRADD 312311 sc-eQTL 6.62e-01 -0.0401 0.0916 0.489 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -470302 sc-eQTL 1.05e-01 -0.118 0.0725 0.489 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 611803 sc-eQTL 1.12e-01 -0.0922 0.0578 0.489 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 547739 sc-eQTL 9.99e-01 5.35e-05 0.0563 0.489 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 522198 sc-eQTL 5.21e-01 0.054 0.0839 0.489 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 417918 sc-eQTL 6.73e-01 0.039 0.0922 0.489 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136040 PLXNC1 -158891 eQTL 0.0075 0.0217 0.00811 0.0 0.0 0.5
ENSG00000169372 CRADD 312311 eQTL 0.0284 0.0295 0.0134 0.00125 0.0 0.5

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000169372 CRADD 312311 1.27e-06 9.82e-07 3.41e-07 6.45e-07 3.48e-07 4.82e-07 1.32e-06 3.65e-07 1.41e-06 4.36e-07 1.49e-06 6.57e-07 2e-06 2.7e-07 5.17e-07 8.22e-07 8.06e-07 6.21e-07 7.25e-07 6.9e-07 6.17e-07 1.33e-06 9.29e-07 6.4e-07 2.06e-06 4.31e-07 8.68e-07 7.03e-07 1.25e-06 1.2e-06 5.88e-07 2.05e-07 2.19e-07 6.53e-07 5.46e-07 4.5e-07 4.54e-07 1.67e-07 3.52e-07 2.65e-07 2.83e-07 1.59e-06 5.66e-08 4.15e-08 2.11e-07 1.24e-07 2.27e-07 6.95e-08 1.34e-07