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Genes within 1Mb (chr12:93987394:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -663163 sc-eQTL 8.62e-01 0.0149 0.0857 0.47 B L1
ENSG00000136040 PLXNC1 -161183 sc-eQTL 7.21e-01 -0.0174 0.0486 0.47 B L1
ENSG00000169372 CRADD 310019 sc-eQTL 4.20e-02 -0.149 0.0729 0.47 B L1
ENSG00000173588 CEP83 -472594 sc-eQTL 3.41e-01 -0.0585 0.0612 0.47 B L1
ENSG00000173598 NUDT4 609511 sc-eQTL 6.27e-01 0.0266 0.0547 0.47 B L1
ENSG00000177889 UBE2N 545447 sc-eQTL 1.76e-01 0.0653 0.048 0.47 B L1
ENSG00000198015 MRPL42 519906 sc-eQTL 7.43e-01 -0.0247 0.0753 0.47 B L1
ENSG00000257345 LINC02413 988176 sc-eQTL 8.89e-01 -0.0105 0.0749 0.47 B L1
ENSG00000120833 SOCS2 417580 sc-eQTL 5.73e-01 0.028 0.0496 0.47 CD4T L1
ENSG00000136040 PLXNC1 -161183 sc-eQTL 3.24e-01 0.0514 0.052 0.47 CD4T L1
ENSG00000169372 CRADD 310019 sc-eQTL 4.20e-01 -0.0689 0.0852 0.47 CD4T L1
ENSG00000173588 CEP83 -472594 sc-eQTL 7.20e-01 -0.0196 0.0545 0.47 CD4T L1
ENSG00000173598 NUDT4 609511 sc-eQTL 2.13e-01 0.0614 0.0491 0.47 CD4T L1
ENSG00000177889 UBE2N 545447 sc-eQTL 6.81e-01 0.0188 0.0457 0.47 CD4T L1
ENSG00000198015 MRPL42 519906 sc-eQTL 4.97e-01 -0.054 0.0794 0.47 CD4T L1
ENSG00000057704 TMCC3 -663163 sc-eQTL 5.36e-01 -0.0302 0.0487 0.47 CD8T L1
ENSG00000120833 SOCS2 417580 sc-eQTL 1.51e-01 -0.0936 0.0649 0.47 CD8T L1
ENSG00000136040 PLXNC1 -161183 sc-eQTL 2.84e-01 0.0719 0.067 0.47 CD8T L1
ENSG00000169372 CRADD 310019 sc-eQTL 9.24e-01 -0.00756 0.079 0.47 CD8T L1
ENSG00000173588 CEP83 -472594 sc-eQTL 3.51e-01 0.0586 0.0626 0.47 CD8T L1
ENSG00000173598 NUDT4 609511 sc-eQTL 1.01e-01 0.0766 0.0466 0.47 CD8T L1
ENSG00000177889 UBE2N 545447 sc-eQTL 6.01e-01 0.0306 0.0583 0.47 CD8T L1
ENSG00000198015 MRPL42 519906 sc-eQTL 4.40e-01 -0.0642 0.083 0.47 CD8T L1
ENSG00000057704 TMCC3 -663163 sc-eQTL 6.27e-01 0.0451 0.0925 0.473 DC L1
ENSG00000136040 PLXNC1 -161183 sc-eQTL 2.19e-01 0.102 0.0826 0.473 DC L1
ENSG00000169372 CRADD 310019 sc-eQTL 7.57e-01 0.029 0.0935 0.473 DC L1
ENSG00000173588 CEP83 -472594 sc-eQTL 8.40e-02 -0.127 0.0732 0.473 DC L1
ENSG00000173598 NUDT4 609511 sc-eQTL 2.88e-01 -0.0817 0.0767 0.473 DC L1
ENSG00000177889 UBE2N 545447 sc-eQTL 6.16e-01 0.0391 0.0776 0.473 DC L1
ENSG00000198015 MRPL42 519906 sc-eQTL 7.81e-01 -0.0248 0.0892 0.473 DC L1
ENSG00000057704 TMCC3 -663163 sc-eQTL 2.74e-01 -0.0682 0.0622 0.47 Mono L1
ENSG00000136040 PLXNC1 -161183 sc-eQTL 8.52e-01 0.00965 0.0517 0.47 Mono L1
ENSG00000169372 CRADD 310019 sc-eQTL 6.24e-01 -0.0467 0.0951 0.47 Mono L1
ENSG00000173588 CEP83 -472594 sc-eQTL 8.19e-01 0.0175 0.0764 0.47 Mono L1
ENSG00000173598 NUDT4 609511 sc-eQTL 1.83e-01 0.0874 0.0654 0.47 Mono L1
ENSG00000177889 UBE2N 545447 sc-eQTL 9.89e-01 -0.00067 0.0492 0.47 Mono L1
ENSG00000198015 MRPL42 519906 sc-eQTL 4.95e-02 -0.13 0.0657 0.47 Mono L1
ENSG00000057704 TMCC3 -663163 sc-eQTL 9.57e-01 -0.00411 0.0762 0.472 NK L1
ENSG00000120833 SOCS2 417580 sc-eQTL 2.39e-01 -0.0703 0.0595 0.472 NK L1
ENSG00000136040 PLXNC1 -161183 sc-eQTL 8.88e-01 0.00879 0.0624 0.472 NK L1
ENSG00000169372 CRADD 310019 sc-eQTL 9.61e-01 -0.00442 0.0896 0.472 NK L1
ENSG00000173588 CEP83 -472594 sc-eQTL 2.14e-01 0.0881 0.0706 0.472 NK L1
ENSG00000173598 NUDT4 609511 sc-eQTL 7.11e-02 0.104 0.0575 0.472 NK L1
ENSG00000177889 UBE2N 545447 sc-eQTL 3.91e-01 0.0492 0.0573 0.472 NK L1
ENSG00000198015 MRPL42 519906 sc-eQTL 4.62e-01 -0.0604 0.0818 0.472 NK L1
ENSG00000246985 SOCS2-AS1 415626 sc-eQTL 4.53e-01 -0.0702 0.0933 0.472 NK L1
ENSG00000057704 TMCC3 -663163 sc-eQTL 2.61e-01 0.0864 0.0766 0.47 Other_T L1
ENSG00000120833 SOCS2 417580 sc-eQTL 8.50e-01 -0.0143 0.0758 0.47 Other_T L1
ENSG00000136040 PLXNC1 -161183 sc-eQTL 2.22e-01 0.0867 0.0708 0.47 Other_T L1
ENSG00000169372 CRADD 310019 sc-eQTL 4.46e-01 0.0656 0.0858 0.47 Other_T L1
ENSG00000173588 CEP83 -472594 sc-eQTL 9.36e-01 0.00646 0.08 0.47 Other_T L1
ENSG00000173598 NUDT4 609511 sc-eQTL 3.94e-01 -0.0524 0.0613 0.47 Other_T L1
ENSG00000177889 UBE2N 545447 sc-eQTL 1.04e-01 0.0924 0.0565 0.47 Other_T L1
ENSG00000198015 MRPL42 519906 sc-eQTL 5.05e-01 0.0449 0.0672 0.47 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -663163 sc-eQTL 9.86e-01 0.00152 0.0868 0.48 B_Activated L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 7.44e-01 -0.0268 0.0819 0.48 B_Activated L2
ENSG00000169372 CRADD 310019 sc-eQTL 4.12e-01 -0.0788 0.096 0.48 B_Activated L2
ENSG00000173588 CEP83 -472594 sc-eQTL 4.99e-01 0.0691 0.102 0.48 B_Activated L2
ENSG00000173598 NUDT4 609511 sc-eQTL 1.38e-01 0.127 0.085 0.48 B_Activated L2
ENSG00000177889 UBE2N 545447 sc-eQTL 4.02e-01 -0.0891 0.106 0.48 B_Activated L2
ENSG00000198015 MRPL42 519906 sc-eQTL 6.99e-01 0.0399 0.103 0.48 B_Activated L2
ENSG00000257345 LINC02413 988176 sc-eQTL 8.05e-01 -0.0247 0.0999 0.48 B_Activated L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 6.74e-01 -0.037 0.0878 0.47 B_Intermediate L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 3.55e-01 0.0684 0.0738 0.47 B_Intermediate L2
ENSG00000169372 CRADD 310019 sc-eQTL 6.13e-01 -0.0445 0.0878 0.47 B_Intermediate L2
ENSG00000173588 CEP83 -472594 sc-eQTL 2.37e-01 -0.0968 0.0816 0.47 B_Intermediate L2
ENSG00000173598 NUDT4 609511 sc-eQTL 4.07e-01 0.0608 0.0731 0.47 B_Intermediate L2
ENSG00000177889 UBE2N 545447 sc-eQTL 2.74e-01 0.0816 0.0744 0.47 B_Intermediate L2
ENSG00000198015 MRPL42 519906 sc-eQTL 5.21e-01 -0.0584 0.0908 0.47 B_Intermediate L2
ENSG00000257345 LINC02413 988176 sc-eQTL 6.74e-01 -0.0378 0.0896 0.47 B_Intermediate L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 3.61e-02 -0.195 0.0923 0.47 B_Memory L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 7.30e-01 -0.0249 0.0722 0.47 B_Memory L2
ENSG00000169372 CRADD 310019 sc-eQTL 5.04e-01 -0.0631 0.0944 0.47 B_Memory L2
ENSG00000173588 CEP83 -472594 sc-eQTL 5.66e-02 0.16 0.0835 0.47 B_Memory L2
ENSG00000173598 NUDT4 609511 sc-eQTL 8.68e-01 0.0113 0.0677 0.47 B_Memory L2
ENSG00000177889 UBE2N 545447 sc-eQTL 1.07e-01 0.0974 0.0602 0.47 B_Memory L2
ENSG00000198015 MRPL42 519906 sc-eQTL 3.56e-01 -0.083 0.0898 0.47 B_Memory L2
ENSG00000257345 LINC02413 988176 sc-eQTL 2.09e-01 0.113 0.0896 0.47 B_Memory L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 6.36e-02 0.161 0.0861 0.47 B_Naive1 L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 2.52e-01 -0.0845 0.0735 0.47 B_Naive1 L2
ENSG00000169372 CRADD 310019 sc-eQTL 3.54e-02 -0.194 0.0916 0.47 B_Naive1 L2
ENSG00000173588 CEP83 -472594 sc-eQTL 9.95e-01 0.000504 0.0762 0.47 B_Naive1 L2
ENSG00000173598 NUDT4 609511 sc-eQTL 6.54e-01 0.0297 0.0662 0.47 B_Naive1 L2
ENSG00000177889 UBE2N 545447 sc-eQTL 9.83e-01 -0.00152 0.0713 0.47 B_Naive1 L2
ENSG00000198015 MRPL42 519906 sc-eQTL 5.36e-01 -0.051 0.0822 0.47 B_Naive1 L2
ENSG00000257345 LINC02413 988176 sc-eQTL 4.80e-01 0.0616 0.0871 0.47 B_Naive1 L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 3.27e-01 -0.0838 0.0853 0.472 B_Naive2 L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 2.58e-01 -0.0906 0.0798 0.472 B_Naive2 L2
ENSG00000169372 CRADD 310019 sc-eQTL 5.30e-01 -0.0567 0.0901 0.472 B_Naive2 L2
ENSG00000173588 CEP83 -472594 sc-eQTL 2.45e-01 -0.0982 0.0842 0.472 B_Naive2 L2
ENSG00000173598 NUDT4 609511 sc-eQTL 9.60e-01 -0.00375 0.0745 0.472 B_Naive2 L2
ENSG00000177889 UBE2N 545447 sc-eQTL 1.77e-01 0.0983 0.0726 0.472 B_Naive2 L2
ENSG00000198015 MRPL42 519906 sc-eQTL 8.16e-01 0.0221 0.0945 0.472 B_Naive2 L2
ENSG00000257345 LINC02413 988176 sc-eQTL 1.44e-01 0.132 0.0903 0.472 B_Naive2 L2
ENSG00000120833 SOCS2 417580 sc-eQTL 2.53e-01 -0.106 0.0925 0.48 CD4_CTL L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 9.01e-01 -0.011 0.0885 0.48 CD4_CTL L2
ENSG00000169372 CRADD 310019 sc-eQTL 9.87e-01 0.00148 0.0898 0.48 CD4_CTL L2
ENSG00000173588 CEP83 -472594 sc-eQTL 9.72e-01 -0.00323 0.0905 0.48 CD4_CTL L2
ENSG00000173598 NUDT4 609511 sc-eQTL 2.21e-02 0.2 0.0868 0.48 CD4_CTL L2
ENSG00000177889 UBE2N 545447 sc-eQTL 4.74e-01 0.0643 0.0896 0.48 CD4_CTL L2
ENSG00000198015 MRPL42 519906 sc-eQTL 9.10e-01 -0.0113 0.1 0.48 CD4_CTL L2
ENSG00000120833 SOCS2 417580 sc-eQTL 2.53e-01 0.0593 0.0516 0.47 CD4_Naive L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 3.62e-01 0.0534 0.0585 0.47 CD4_Naive L2
ENSG00000169372 CRADD 310019 sc-eQTL 1.41e-01 -0.132 0.089 0.47 CD4_Naive L2
ENSG00000173588 CEP83 -472594 sc-eQTL 7.74e-01 -0.0182 0.0634 0.47 CD4_Naive L2
ENSG00000173598 NUDT4 609511 sc-eQTL 1.94e-01 0.0682 0.0523 0.47 CD4_Naive L2
ENSG00000177889 UBE2N 545447 sc-eQTL 6.96e-01 -0.0198 0.0504 0.47 CD4_Naive L2
ENSG00000198015 MRPL42 519906 sc-eQTL 5.73e-01 -0.0478 0.0846 0.47 CD4_Naive L2
ENSG00000120833 SOCS2 417580 sc-eQTL 9.12e-01 -0.00648 0.0583 0.47 CD4_TCM L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 8.59e-01 0.0123 0.0693 0.47 CD4_TCM L2
ENSG00000169372 CRADD 310019 sc-eQTL 3.63e-01 0.0851 0.0933 0.47 CD4_TCM L2
ENSG00000173588 CEP83 -472594 sc-eQTL 6.42e-01 0.0344 0.0738 0.47 CD4_TCM L2
ENSG00000173598 NUDT4 609511 sc-eQTL 9.76e-01 0.0018 0.0586 0.47 CD4_TCM L2
ENSG00000177889 UBE2N 545447 sc-eQTL 9.81e-01 0.00131 0.0564 0.47 CD4_TCM L2
ENSG00000198015 MRPL42 519906 sc-eQTL 4.19e-01 -0.0695 0.0859 0.47 CD4_TCM L2
ENSG00000120833 SOCS2 417580 sc-eQTL 1.09e-01 -0.1 0.0623 0.47 CD4_TEM L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 6.28e-01 0.0364 0.075 0.47 CD4_TEM L2
ENSG00000169372 CRADD 310019 sc-eQTL 2.29e-01 -0.111 0.0921 0.47 CD4_TEM L2
ENSG00000173588 CEP83 -472594 sc-eQTL 3.02e-03 -0.248 0.0825 0.47 CD4_TEM L2
ENSG00000173598 NUDT4 609511 sc-eQTL 6.36e-01 0.0346 0.0728 0.47 CD4_TEM L2
ENSG00000177889 UBE2N 545447 sc-eQTL 8.89e-04 0.246 0.0729 0.47 CD4_TEM L2
ENSG00000198015 MRPL42 519906 sc-eQTL 2.02e-01 -0.105 0.082 0.47 CD4_TEM L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 8.14e-01 -0.0172 0.0731 0.47 CD8_CTL L2
ENSG00000120833 SOCS2 417580 sc-eQTL 9.35e-01 0.00603 0.074 0.47 CD8_CTL L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 6.79e-01 -0.031 0.075 0.47 CD8_CTL L2
ENSG00000169372 CRADD 310019 sc-eQTL 8.14e-01 0.0215 0.0912 0.47 CD8_CTL L2
ENSG00000173588 CEP83 -472594 sc-eQTL 9.84e-02 0.136 0.0821 0.47 CD8_CTL L2
ENSG00000173598 NUDT4 609511 sc-eQTL 2.34e-01 0.0803 0.0673 0.47 CD8_CTL L2
ENSG00000177889 UBE2N 545447 sc-eQTL 2.75e-01 -0.0856 0.0782 0.47 CD8_CTL L2
ENSG00000198015 MRPL42 519906 sc-eQTL 4.47e-01 -0.0684 0.0898 0.47 CD8_CTL L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 6.83e-01 -0.0276 0.0674 0.47 CD8_Naive L2
ENSG00000120833 SOCS2 417580 sc-eQTL 4.07e-02 -0.144 0.07 0.47 CD8_Naive L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 7.70e-02 0.14 0.0786 0.47 CD8_Naive L2
ENSG00000169372 CRADD 310019 sc-eQTL 7.53e-01 0.0289 0.0916 0.47 CD8_Naive L2
ENSG00000173588 CEP83 -472594 sc-eQTL 6.51e-01 0.0346 0.0763 0.47 CD8_Naive L2
ENSG00000173598 NUDT4 609511 sc-eQTL 9.61e-02 0.105 0.063 0.47 CD8_Naive L2
ENSG00000177889 UBE2N 545447 sc-eQTL 1.26e-01 0.106 0.0688 0.47 CD8_Naive L2
ENSG00000198015 MRPL42 519906 sc-eQTL 1.51e-01 -0.127 0.0879 0.47 CD8_Naive L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 6.32e-01 -0.0348 0.0725 0.472 CD8_TCM L2
ENSG00000120833 SOCS2 417580 sc-eQTL 7.68e-01 -0.0238 0.0809 0.472 CD8_TCM L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 4.14e-03 0.258 0.089 0.472 CD8_TCM L2
ENSG00000169372 CRADD 310019 sc-eQTL 6.10e-01 -0.049 0.096 0.472 CD8_TCM L2
ENSG00000173588 CEP83 -472594 sc-eQTL 1.57e-01 -0.132 0.0928 0.472 CD8_TCM L2
ENSG00000173598 NUDT4 609511 sc-eQTL 9.50e-01 0.00476 0.0763 0.472 CD8_TCM L2
ENSG00000177889 UBE2N 545447 sc-eQTL 5.84e-03 0.248 0.089 0.472 CD8_TCM L2
ENSG00000198015 MRPL42 519906 sc-eQTL 8.62e-01 0.0162 0.0931 0.472 CD8_TCM L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 5.55e-01 0.0473 0.0799 0.479 CD8_TEM L2
ENSG00000120833 SOCS2 417580 sc-eQTL 2.98e-01 -0.0888 0.085 0.479 CD8_TEM L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 9.75e-01 0.00286 0.0898 0.479 CD8_TEM L2
ENSG00000169372 CRADD 310019 sc-eQTL 3.89e-01 0.082 0.0949 0.479 CD8_TEM L2
ENSG00000173588 CEP83 -472594 sc-eQTL 3.51e-01 0.0864 0.0924 0.479 CD8_TEM L2
ENSG00000173598 NUDT4 609511 sc-eQTL 5.59e-01 0.0511 0.0875 0.479 CD8_TEM L2
ENSG00000177889 UBE2N 545447 sc-eQTL 9.89e-02 -0.138 0.0831 0.479 CD8_TEM L2
ENSG00000198015 MRPL42 519906 sc-eQTL 9.20e-01 -0.00873 0.0866 0.479 CD8_TEM L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 1.29e-01 -0.116 0.076 0.472 MAIT L2
ENSG00000120833 SOCS2 417580 sc-eQTL 8.62e-01 0.0141 0.0813 0.472 MAIT L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 7.86e-02 0.131 0.0743 0.472 MAIT L2
ENSG00000169372 CRADD 310019 sc-eQTL 9.66e-01 0.00412 0.0952 0.472 MAIT L2
ENSG00000173588 CEP83 -472594 sc-eQTL 1.16e-01 0.134 0.0852 0.472 MAIT L2
ENSG00000173598 NUDT4 609511 sc-eQTL 9.58e-01 0.00361 0.0691 0.472 MAIT L2
ENSG00000177889 UBE2N 545447 sc-eQTL 2.82e-01 0.0911 0.0845 0.472 MAIT L2
ENSG00000198015 MRPL42 519906 sc-eQTL 2.73e-01 0.0948 0.0863 0.472 MAIT L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 5.07e-01 0.0607 0.0914 0.473 NK_CD56bright L2
ENSG00000120833 SOCS2 417580 sc-eQTL 7.16e-02 -0.149 0.0824 0.473 NK_CD56bright L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 1.53e-01 -0.116 0.0805 0.473 NK_CD56bright L2
ENSG00000169372 CRADD 310019 sc-eQTL 2.42e-01 -0.115 0.0981 0.473 NK_CD56bright L2
ENSG00000173588 CEP83 -472594 sc-eQTL 8.44e-01 0.0161 0.082 0.473 NK_CD56bright L2
ENSG00000173598 NUDT4 609511 sc-eQTL 2.96e-01 0.0916 0.0874 0.473 NK_CD56bright L2
ENSG00000177889 UBE2N 545447 sc-eQTL 8.20e-01 -0.0212 0.0931 0.473 NK_CD56bright L2
ENSG00000198015 MRPL42 519906 sc-eQTL 4.77e-01 -0.0659 0.0926 0.473 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 415626 sc-eQTL 4.43e-01 -0.0663 0.0863 0.473 NK_CD56bright L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 8.19e-01 0.018 0.0787 0.474 NK_CD56dim L2
ENSG00000120833 SOCS2 417580 sc-eQTL 8.29e-01 -0.0146 0.0671 0.474 NK_CD56dim L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 8.75e-01 0.0115 0.073 0.474 NK_CD56dim L2
ENSG00000169372 CRADD 310019 sc-eQTL 5.48e-01 -0.0572 0.0951 0.474 NK_CD56dim L2
ENSG00000173588 CEP83 -472594 sc-eQTL 5.05e-03 0.235 0.0828 0.474 NK_CD56dim L2
ENSG00000173598 NUDT4 609511 sc-eQTL 4.59e-01 0.05 0.0673 0.474 NK_CD56dim L2
ENSG00000177889 UBE2N 545447 sc-eQTL 8.84e-01 0.00948 0.0648 0.474 NK_CD56dim L2
ENSG00000198015 MRPL42 519906 sc-eQTL 9.18e-01 -0.00924 0.0897 0.474 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 415626 sc-eQTL 5.55e-01 0.0545 0.0922 0.474 NK_CD56dim L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 9.72e-01 -0.00306 0.0885 0.475 NK_HLA L2
ENSG00000120833 SOCS2 417580 sc-eQTL 4.68e-01 -0.0637 0.0876 0.475 NK_HLA L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 6.96e-01 0.0313 0.0801 0.475 NK_HLA L2
ENSG00000169372 CRADD 310019 sc-eQTL 8.08e-01 -0.0239 0.0982 0.475 NK_HLA L2
ENSG00000173588 CEP83 -472594 sc-eQTL 1.07e-01 -0.148 0.0914 0.475 NK_HLA L2
ENSG00000173598 NUDT4 609511 sc-eQTL 3.59e-01 0.0753 0.082 0.475 NK_HLA L2
ENSG00000177889 UBE2N 545447 sc-eQTL 4.25e-01 0.0734 0.0919 0.475 NK_HLA L2
ENSG00000198015 MRPL42 519906 sc-eQTL 6.37e-01 0.0485 0.103 0.475 NK_HLA L2
ENSG00000246985 SOCS2-AS1 415626 sc-eQTL 3.17e-01 -0.083 0.0828 0.475 NK_HLA L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 9.63e-01 -0.00397 0.0852 0.474 NK_cytokine L2
ENSG00000120833 SOCS2 417580 sc-eQTL 2.55e-01 -0.0847 0.0742 0.474 NK_cytokine L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 3.64e-01 -0.0685 0.0753 0.474 NK_cytokine L2
ENSG00000169372 CRADD 310019 sc-eQTL 4.69e-01 0.0611 0.0842 0.474 NK_cytokine L2
ENSG00000173588 CEP83 -472594 sc-eQTL 3.42e-01 -0.0824 0.0865 0.474 NK_cytokine L2
ENSG00000173598 NUDT4 609511 sc-eQTL 3.82e-01 0.0579 0.0662 0.474 NK_cytokine L2
ENSG00000177889 UBE2N 545447 sc-eQTL 5.59e-01 0.0446 0.0762 0.474 NK_cytokine L2
ENSG00000198015 MRPL42 519906 sc-eQTL 3.11e-01 -0.0895 0.0881 0.474 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 415626 sc-eQTL 2.28e-01 -0.106 0.088 0.474 NK_cytokine L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 8.68e-01 -0.0166 0.0993 0.433 PB L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 2.02e-01 -0.13 0.101 0.433 PB L2
ENSG00000169372 CRADD 310019 sc-eQTL 3.84e-01 0.0816 0.0934 0.433 PB L2
ENSG00000173588 CEP83 -472594 sc-eQTL 3.69e-01 -0.095 0.105 0.433 PB L2
ENSG00000173598 NUDT4 609511 sc-eQTL 1.00e+00 -3.39e-05 0.0876 0.433 PB L2
ENSG00000177889 UBE2N 545447 sc-eQTL 3.51e-01 0.072 0.0769 0.433 PB L2
ENSG00000198015 MRPL42 519906 sc-eQTL 9.43e-01 0.00761 0.106 0.433 PB L2
ENSG00000257345 LINC02413 988176 sc-eQTL 1.51e-01 -0.147 0.102 0.433 PB L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 3.17e-01 0.077 0.0768 0.47 Pro_T L2
ENSG00000120833 SOCS2 417580 sc-eQTL 2.21e-01 0.101 0.082 0.47 Pro_T L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 6.97e-01 0.0341 0.0876 0.47 Pro_T L2
ENSG00000169372 CRADD 310019 sc-eQTL 5.11e-01 0.0563 0.0855 0.47 Pro_T L2
ENSG00000173588 CEP83 -472594 sc-eQTL 2.63e-01 -0.0971 0.0865 0.47 Pro_T L2
ENSG00000173598 NUDT4 609511 sc-eQTL 1.07e-01 -0.111 0.0689 0.47 Pro_T L2
ENSG00000177889 UBE2N 545447 sc-eQTL 9.96e-01 0.00032 0.0639 0.47 Pro_T L2
ENSG00000198015 MRPL42 519906 sc-eQTL 7.92e-01 0.0203 0.0768 0.47 Pro_T L2
ENSG00000120833 SOCS2 417580 sc-eQTL 9.56e-01 0.00426 0.0777 0.47 Treg L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 6.47e-01 0.0375 0.0818 0.47 Treg L2
ENSG00000169372 CRADD 310019 sc-eQTL 3.74e-01 0.0841 0.0943 0.47 Treg L2
ENSG00000173588 CEP83 -472594 sc-eQTL 8.01e-01 0.0221 0.0876 0.47 Treg L2
ENSG00000173598 NUDT4 609511 sc-eQTL 4.29e-01 0.0529 0.0669 0.47 Treg L2
ENSG00000177889 UBE2N 545447 sc-eQTL 1.58e-01 -0.102 0.0719 0.47 Treg L2
ENSG00000198015 MRPL42 519906 sc-eQTL 7.91e-01 -0.0241 0.0909 0.47 Treg L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 6.01e-01 -0.0525 0.1 0.478 cDC L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 6.80e-01 0.0362 0.0875 0.478 cDC L2
ENSG00000169372 CRADD 310019 sc-eQTL 8.63e-01 0.0167 0.0968 0.478 cDC L2
ENSG00000173588 CEP83 -472594 sc-eQTL 5.22e-02 -0.159 0.0813 0.478 cDC L2
ENSG00000173598 NUDT4 609511 sc-eQTL 6.60e-01 0.0433 0.0983 0.478 cDC L2
ENSG00000177889 UBE2N 545447 sc-eQTL 7.08e-01 0.0321 0.0855 0.478 cDC L2
ENSG00000198015 MRPL42 519906 sc-eQTL 8.30e-01 0.021 0.0981 0.478 cDC L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 4.68e-01 -0.0514 0.0706 0.47 cMono_IL1B L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 6.27e-01 0.0304 0.0623 0.47 cMono_IL1B L2
ENSG00000169372 CRADD 310019 sc-eQTL 4.37e-01 0.0721 0.0926 0.47 cMono_IL1B L2
ENSG00000173588 CEP83 -472594 sc-eQTL 3.35e-01 0.082 0.0848 0.47 cMono_IL1B L2
ENSG00000173598 NUDT4 609511 sc-eQTL 7.79e-01 0.0191 0.0679 0.47 cMono_IL1B L2
ENSG00000177889 UBE2N 545447 sc-eQTL 4.06e-01 -0.0442 0.0531 0.47 cMono_IL1B L2
ENSG00000198015 MRPL42 519906 sc-eQTL 2.95e-01 -0.0773 0.0736 0.47 cMono_IL1B L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 8.02e-01 -0.02 0.0796 0.47 cMono_S100A L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 8.06e-01 0.016 0.0649 0.47 cMono_S100A L2
ENSG00000169372 CRADD 310019 sc-eQTL 3.44e-01 -0.094 0.0992 0.47 cMono_S100A L2
ENSG00000173588 CEP83 -472594 sc-eQTL 1.92e-01 -0.12 0.0915 0.47 cMono_S100A L2
ENSG00000173598 NUDT4 609511 sc-eQTL 3.88e-01 0.0674 0.078 0.47 cMono_S100A L2
ENSG00000177889 UBE2N 545447 sc-eQTL 6.78e-01 0.0282 0.068 0.47 cMono_S100A L2
ENSG00000198015 MRPL42 519906 sc-eQTL 3.45e-01 -0.0736 0.0778 0.47 cMono_S100A L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 4.06e-03 0.252 0.0862 0.476 gdT L2
ENSG00000120833 SOCS2 417580 sc-eQTL 9.48e-01 -0.00696 0.107 0.476 gdT L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 1.47e-01 -0.162 0.111 0.476 gdT L2
ENSG00000169372 CRADD 310019 sc-eQTL 2.99e-02 0.237 0.108 0.476 gdT L2
ENSG00000173588 CEP83 -472594 sc-eQTL 7.35e-01 0.0371 0.109 0.476 gdT L2
ENSG00000173598 NUDT4 609511 sc-eQTL 4.07e-02 -0.212 0.103 0.476 gdT L2
ENSG00000177889 UBE2N 545447 sc-eQTL 8.66e-01 0.0193 0.114 0.476 gdT L2
ENSG00000198015 MRPL42 519906 sc-eQTL 9.07e-01 -0.013 0.111 0.476 gdT L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 8.26e-01 0.0209 0.0946 0.469 intMono L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 1.29e-01 -0.121 0.0793 0.469 intMono L2
ENSG00000169372 CRADD 310019 sc-eQTL 4.63e-01 -0.0675 0.0918 0.469 intMono L2
ENSG00000173588 CEP83 -472594 sc-eQTL 8.47e-01 0.0186 0.0961 0.469 intMono L2
ENSG00000173598 NUDT4 609511 sc-eQTL 3.73e-01 0.0745 0.0835 0.469 intMono L2
ENSG00000177889 UBE2N 545447 sc-eQTL 7.20e-01 0.0286 0.0796 0.469 intMono L2
ENSG00000198015 MRPL42 519906 sc-eQTL 6.57e-01 -0.0381 0.0858 0.469 intMono L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 1.01e-01 -0.14 0.0852 0.473 ncMono L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 9.70e-01 -0.00222 0.0591 0.473 ncMono L2
ENSG00000169372 CRADD 310019 sc-eQTL 2.02e-01 -0.117 0.0916 0.473 ncMono L2
ENSG00000173588 CEP83 -472594 sc-eQTL 4.95e-02 0.181 0.0915 0.473 ncMono L2
ENSG00000173598 NUDT4 609511 sc-eQTL 8.77e-01 -0.0125 0.0808 0.473 ncMono L2
ENSG00000177889 UBE2N 545447 sc-eQTL 1.64e-01 -0.11 0.0784 0.473 ncMono L2
ENSG00000198015 MRPL42 519906 sc-eQTL 1.72e-01 -0.111 0.0813 0.473 ncMono L2
ENSG00000057704 TMCC3 -663163 sc-eQTL 6.82e-01 0.0414 0.101 0.483 pDC L2
ENSG00000136040 PLXNC1 -161183 sc-eQTL 1.33e-01 0.151 0.0996 0.483 pDC L2
ENSG00000169372 CRADD 310019 sc-eQTL 4.10e-01 -0.0838 0.101 0.483 pDC L2
ENSG00000173588 CEP83 -472594 sc-eQTL 6.09e-01 0.0552 0.108 0.483 pDC L2
ENSG00000173598 NUDT4 609511 sc-eQTL 2.29e-01 -0.105 0.087 0.483 pDC L2
ENSG00000177889 UBE2N 545447 sc-eQTL 9.60e-01 -0.00518 0.104 0.483 pDC L2
ENSG00000198015 MRPL42 519906 sc-eQTL 4.82e-01 0.0754 0.107 0.483 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -663163 sc-eQTL 8.96e-01 -0.012 0.0916 0.47 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -161183 sc-eQTL 9.79e-01 0.00148 0.0554 0.47 B_Memory LOneK1K
ENSG00000169372 CRADD 310019 sc-eQTL 2.82e-01 -0.102 0.0941 0.47 B_Memory LOneK1K
ENSG00000173588 CEP83 -472594 sc-eQTL 8.25e-01 0.0171 0.0774 0.47 B_Memory LOneK1K
ENSG00000173598 NUDT4 609511 sc-eQTL 5.37e-01 0.0344 0.0557 0.47 B_Memory LOneK1K
ENSG00000177889 UBE2N 545447 sc-eQTL 1.30e-01 0.0769 0.0506 0.47 B_Memory LOneK1K
ENSG00000198015 MRPL42 519906 sc-eQTL 3.59e-01 -0.0759 0.0827 0.47 B_Memory LOneK1K
ENSG00000257345 LINC02413 988176 sc-eQTL 7.93e-01 -0.0226 0.0863 0.47 B_Memory LOneK1K
ENSG00000057704 TMCC3 -663163 sc-eQTL 4.84e-01 0.0581 0.0828 0.47 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -161183 sc-eQTL 8.29e-02 -0.116 0.0668 0.47 B_Naive LOneK1K
ENSG00000169372 CRADD 310019 sc-eQTL 7.49e-02 -0.159 0.0886 0.47 B_Naive LOneK1K
ENSG00000173588 CEP83 -472594 sc-eQTL 5.69e-01 -0.04 0.0701 0.47 B_Naive LOneK1K
ENSG00000173598 NUDT4 609511 sc-eQTL 9.48e-01 0.00427 0.0651 0.47 B_Naive LOneK1K
ENSG00000177889 UBE2N 545447 sc-eQTL 4.37e-01 0.0519 0.0667 0.47 B_Naive LOneK1K
ENSG00000198015 MRPL42 519906 sc-eQTL 5.39e-01 -0.0506 0.0821 0.47 B_Naive LOneK1K
ENSG00000257345 LINC02413 988176 sc-eQTL 4.07e-01 0.0701 0.0844 0.47 B_Naive LOneK1K
ENSG00000057704 TMCC3 -663163 sc-eQTL 6.54e-01 -0.0289 0.0644 0.47 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -161183 sc-eQTL 7.62e-01 0.0173 0.0571 0.47 CD14_Mono LOneK1K
ENSG00000169372 CRADD 310019 sc-eQTL 9.43e-01 -0.00656 0.0922 0.47 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -472594 sc-eQTL 9.45e-01 -0.00537 0.0779 0.47 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 609511 sc-eQTL 1.65e-01 0.0914 0.0657 0.47 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 545447 sc-eQTL 6.82e-01 0.0204 0.0497 0.47 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 519906 sc-eQTL 9.75e-02 -0.114 0.0684 0.47 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 -663163 sc-eQTL 5.21e-01 -0.0548 0.0852 0.47 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -161183 sc-eQTL 4.27e-01 -0.0432 0.0543 0.47 CD16_Mono LOneK1K
ENSG00000169372 CRADD 310019 sc-eQTL 1.71e-01 -0.134 0.098 0.47 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -472594 sc-eQTL 3.34e-01 0.0874 0.0902 0.47 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 609511 sc-eQTL 7.47e-01 -0.0237 0.0736 0.47 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 545447 sc-eQTL 2.87e-01 -0.0784 0.0735 0.47 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 519906 sc-eQTL 1.17e-01 -0.122 0.0772 0.47 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 -663163 sc-eQTL 8.52e-01 0.0145 0.0777 0.474 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 417580 sc-eQTL 1.54e-01 -0.0861 0.0602 0.474 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -161183 sc-eQTL 5.87e-01 0.036 0.0661 0.474 NK_CD56dim LOneK1K
ENSG00000169372 CRADD 310019 sc-eQTL 9.61e-01 -0.00456 0.0934 0.474 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -472594 sc-eQTL 1.24e-01 0.114 0.0739 0.474 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 609511 sc-eQTL 1.28e-01 0.0901 0.059 0.474 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 545447 sc-eQTL 4.44e-01 0.0439 0.0573 0.474 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 519906 sc-eQTL 5.56e-01 -0.0504 0.0856 0.474 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 415626 sc-eQTL 4.25e-01 -0.0751 0.0939 0.474 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136040 PLXNC1 -161183 eQTL 0.0409 -0.0166 0.00811 0.0 0.0 0.453
ENSG00000169372 CRADD 310019 eQTL 0.00734 -0.036 0.0134 0.00378 0.0 0.453

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000169372 CRADD 310019 1.19e-06 9.33e-07 2.84e-07 7.35e-07 3.36e-07 5.63e-07 1.6e-06 4.04e-07 1.38e-06 6.18e-07 1.75e-06 7.85e-07 2.04e-06 3.03e-07 5.34e-07 9.37e-07 8.94e-07 7.05e-07 7.81e-07 5.23e-07 8.11e-07 1.72e-06 8.61e-07 5.57e-07 2.06e-06 7.54e-07 9.48e-07 7.08e-07 1.31e-06 1.24e-06 6.29e-07 3.03e-07 2.61e-07 6.11e-07 5.63e-07 4.8e-07 7.4e-07 2.39e-07 4.75e-07 2.88e-07 2.82e-07 1.62e-06 1.22e-07 1.95e-08 2.96e-07 1.26e-07 2.3e-07 5.92e-08 1.92e-07