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Genes within 1Mb (chr12:93981355:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -669202 sc-eQTL 5.76e-01 0.0464 0.0829 0.506 B L1
ENSG00000136040 PLXNC1 -167222 sc-eQTL 8.76e-01 -0.00732 0.047 0.506 B L1
ENSG00000169372 CRADD 303980 sc-eQTL 4.07e-02 0.145 0.0704 0.506 B L1
ENSG00000173588 CEP83 -478633 sc-eQTL 4.15e-01 0.0484 0.0592 0.506 B L1
ENSG00000173598 NUDT4 603472 sc-eQTL 7.40e-01 -0.0176 0.0529 0.506 B L1
ENSG00000177889 UBE2N 539408 sc-eQTL 1.99e-01 -0.0599 0.0465 0.506 B L1
ENSG00000198015 MRPL42 513867 sc-eQTL 7.76e-01 -0.0207 0.0728 0.506 B L1
ENSG00000257345 LINC02413 982137 sc-eQTL 7.96e-01 0.0188 0.0725 0.506 B L1
ENSG00000120833 SOCS2 411541 sc-eQTL 2.43e-01 -0.0556 0.0475 0.506 CD4T L1
ENSG00000136040 PLXNC1 -167222 sc-eQTL 4.58e-01 -0.0372 0.05 0.506 CD4T L1
ENSG00000169372 CRADD 303980 sc-eQTL 7.53e-03 0.218 0.0807 0.506 CD4T L1
ENSG00000173588 CEP83 -478633 sc-eQTL 5.55e-01 0.031 0.0524 0.506 CD4T L1
ENSG00000173598 NUDT4 603472 sc-eQTL 1.97e-01 -0.061 0.0472 0.506 CD4T L1
ENSG00000177889 UBE2N 539408 sc-eQTL 8.79e-01 -0.0067 0.0439 0.506 CD4T L1
ENSG00000198015 MRPL42 513867 sc-eQTL 5.79e-01 0.0424 0.0764 0.506 CD4T L1
ENSG00000057704 TMCC3 -669202 sc-eQTL 5.79e-01 0.0262 0.0473 0.506 CD8T L1
ENSG00000120833 SOCS2 411541 sc-eQTL 2.51e-01 0.0727 0.0631 0.506 CD8T L1
ENSG00000136040 PLXNC1 -167222 sc-eQTL 1.71e-01 -0.0891 0.0649 0.506 CD8T L1
ENSG00000169372 CRADD 303980 sc-eQTL 4.41e-01 -0.0592 0.0766 0.506 CD8T L1
ENSG00000173588 CEP83 -478633 sc-eQTL 4.87e-01 -0.0424 0.0608 0.506 CD8T L1
ENSG00000173598 NUDT4 603472 sc-eQTL 4.17e-02 -0.0923 0.045 0.506 CD8T L1
ENSG00000177889 UBE2N 539408 sc-eQTL 4.96e-01 -0.0386 0.0566 0.506 CD8T L1
ENSG00000198015 MRPL42 513867 sc-eQTL 5.86e-01 0.044 0.0806 0.506 CD8T L1
ENSG00000057704 TMCC3 -669202 sc-eQTL 9.45e-01 0.00625 0.0898 0.502 DC L1
ENSG00000136040 PLXNC1 -167222 sc-eQTL 1.92e-01 -0.105 0.08 0.502 DC L1
ENSG00000169372 CRADD 303980 sc-eQTL 7.75e-01 0.026 0.0907 0.502 DC L1
ENSG00000173588 CEP83 -478633 sc-eQTL 1.92e-01 0.0933 0.0713 0.502 DC L1
ENSG00000173598 NUDT4 603472 sc-eQTL 3.03e-01 0.0768 0.0744 0.502 DC L1
ENSG00000177889 UBE2N 539408 sc-eQTL 7.32e-01 -0.0258 0.0753 0.502 DC L1
ENSG00000198015 MRPL42 513867 sc-eQTL 8.08e-01 0.0211 0.0866 0.502 DC L1
ENSG00000057704 TMCC3 -669202 sc-eQTL 3.43e-02 0.128 0.0601 0.506 Mono L1
ENSG00000136040 PLXNC1 -167222 sc-eQTL 7.03e-01 -0.0192 0.0504 0.506 Mono L1
ENSG00000169372 CRADD 303980 sc-eQTL 4.42e-01 0.0713 0.0926 0.506 Mono L1
ENSG00000173588 CEP83 -478633 sc-eQTL 5.35e-01 -0.0462 0.0744 0.506 Mono L1
ENSG00000173598 NUDT4 603472 sc-eQTL 2.06e-01 -0.0807 0.0637 0.506 Mono L1
ENSG00000177889 UBE2N 539408 sc-eQTL 9.05e-01 -0.00573 0.048 0.506 Mono L1
ENSG00000198015 MRPL42 513867 sc-eQTL 1.34e-01 0.0966 0.0642 0.506 Mono L1
ENSG00000057704 TMCC3 -669202 sc-eQTL 3.60e-01 0.0673 0.0734 0.504 NK L1
ENSG00000120833 SOCS2 411541 sc-eQTL 4.24e-01 0.0461 0.0576 0.504 NK L1
ENSG00000136040 PLXNC1 -167222 sc-eQTL 8.24e-01 -0.0134 0.0602 0.504 NK L1
ENSG00000169372 CRADD 303980 sc-eQTL 9.39e-01 -0.00666 0.0865 0.504 NK L1
ENSG00000173588 CEP83 -478633 sc-eQTL 2.64e-01 -0.0764 0.0682 0.504 NK L1
ENSG00000173598 NUDT4 603472 sc-eQTL 2.35e-02 -0.126 0.0553 0.504 NK L1
ENSG00000177889 UBE2N 539408 sc-eQTL 9.55e-01 -0.00309 0.0554 0.504 NK L1
ENSG00000198015 MRPL42 513867 sc-eQTL 6.78e-01 0.0329 0.0791 0.504 NK L1
ENSG00000246985 SOCS2-AS1 409587 sc-eQTL 9.85e-01 0.00169 0.0902 0.504 NK L1
ENSG00000057704 TMCC3 -669202 sc-eQTL 8.82e-01 -0.0113 0.0755 0.506 Other_T L1
ENSG00000120833 SOCS2 411541 sc-eQTL 7.73e-01 0.0215 0.0744 0.506 Other_T L1
ENSG00000136040 PLXNC1 -167222 sc-eQTL 2.75e-01 -0.0762 0.0696 0.506 Other_T L1
ENSG00000169372 CRADD 303980 sc-eQTL 1.78e-01 -0.114 0.084 0.506 Other_T L1
ENSG00000173588 CEP83 -478633 sc-eQTL 4.52e-01 -0.0591 0.0784 0.506 Other_T L1
ENSG00000173598 NUDT4 603472 sc-eQTL 4.55e-01 0.045 0.0602 0.506 Other_T L1
ENSG00000177889 UBE2N 539408 sc-eQTL 4.55e-02 -0.111 0.0554 0.506 Other_T L1
ENSG00000198015 MRPL42 513867 sc-eQTL 4.61e-01 -0.0488 0.066 0.506 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -669202 sc-eQTL 5.87e-01 -0.0461 0.0847 0.515 B_Activated L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 7.21e-01 0.0287 0.0801 0.515 B_Activated L2
ENSG00000169372 CRADD 303980 sc-eQTL 4.90e-01 0.0649 0.0939 0.515 B_Activated L2
ENSG00000173588 CEP83 -478633 sc-eQTL 3.85e-01 -0.0867 0.0995 0.515 B_Activated L2
ENSG00000173598 NUDT4 603472 sc-eQTL 1.41e-01 -0.123 0.0831 0.515 B_Activated L2
ENSG00000177889 UBE2N 539408 sc-eQTL 5.14e-01 0.0678 0.104 0.515 B_Activated L2
ENSG00000198015 MRPL42 513867 sc-eQTL 6.89e-01 -0.0404 0.101 0.515 B_Activated L2
ENSG00000257345 LINC02413 982137 sc-eQTL 8.05e-01 0.0242 0.0976 0.515 B_Activated L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 5.60e-01 0.0503 0.0862 0.506 B_Intermediate L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 9.56e-01 0.00399 0.0726 0.506 B_Intermediate L2
ENSG00000169372 CRADD 303980 sc-eQTL 3.14e-01 0.0868 0.0861 0.506 B_Intermediate L2
ENSG00000173588 CEP83 -478633 sc-eQTL 9.07e-01 0.00944 0.0804 0.506 B_Intermediate L2
ENSG00000173598 NUDT4 603472 sc-eQTL 5.62e-01 -0.0417 0.0719 0.506 B_Intermediate L2
ENSG00000177889 UBE2N 539408 sc-eQTL 1.15e-01 -0.115 0.0728 0.506 B_Intermediate L2
ENSG00000198015 MRPL42 513867 sc-eQTL 2.38e-01 0.105 0.0889 0.506 B_Intermediate L2
ENSG00000257345 LINC02413 982137 sc-eQTL 4.76e-01 0.0628 0.0879 0.506 B_Intermediate L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 1.52e-02 0.218 0.089 0.506 B_Memory L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 6.30e-01 0.0337 0.0699 0.506 B_Memory L2
ENSG00000169372 CRADD 303980 sc-eQTL 7.91e-01 0.0243 0.0914 0.506 B_Memory L2
ENSG00000173588 CEP83 -478633 sc-eQTL 5.99e-02 -0.153 0.0809 0.506 B_Memory L2
ENSG00000173598 NUDT4 603472 sc-eQTL 7.69e-01 0.0193 0.0655 0.506 B_Memory L2
ENSG00000177889 UBE2N 539408 sc-eQTL 2.31e-01 -0.0702 0.0584 0.506 B_Memory L2
ENSG00000198015 MRPL42 513867 sc-eQTL 9.85e-01 -0.00162 0.0871 0.506 B_Memory L2
ENSG00000257345 LINC02413 982137 sc-eQTL 3.17e-01 -0.0871 0.0868 0.506 B_Memory L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 2.37e-01 -0.0996 0.0839 0.506 B_Naive1 L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 6.17e-01 0.0358 0.0715 0.506 B_Naive1 L2
ENSG00000169372 CRADD 303980 sc-eQTL 9.64e-02 0.149 0.0892 0.506 B_Naive1 L2
ENSG00000173588 CEP83 -478633 sc-eQTL 8.57e-01 0.0133 0.0739 0.506 B_Naive1 L2
ENSG00000173598 NUDT4 603472 sc-eQTL 8.41e-01 -0.0129 0.0643 0.506 B_Naive1 L2
ENSG00000177889 UBE2N 539408 sc-eQTL 4.35e-01 0.054 0.069 0.506 B_Naive1 L2
ENSG00000198015 MRPL42 513867 sc-eQTL 9.93e-01 -0.000673 0.0798 0.506 B_Naive1 L2
ENSG00000257345 LINC02413 982137 sc-eQTL 8.75e-01 -0.0133 0.0846 0.506 B_Naive1 L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 6.40e-02 0.154 0.0826 0.504 B_Naive2 L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 8.32e-01 0.0165 0.0779 0.504 B_Naive2 L2
ENSG00000169372 CRADD 303980 sc-eQTL 3.45e-01 0.0829 0.0876 0.504 B_Naive2 L2
ENSG00000173588 CEP83 -478633 sc-eQTL 2.89e-01 0.0871 0.082 0.504 B_Naive2 L2
ENSG00000173598 NUDT4 603472 sc-eQTL 3.05e-01 0.0745 0.0724 0.504 B_Naive2 L2
ENSG00000177889 UBE2N 539408 sc-eQTL 3.32e-01 -0.0688 0.0708 0.504 B_Naive2 L2
ENSG00000198015 MRPL42 513867 sc-eQTL 4.01e-01 -0.0774 0.0919 0.504 B_Naive2 L2
ENSG00000257345 LINC02413 982137 sc-eQTL 6.48e-01 -0.0403 0.0883 0.504 B_Naive2 L2
ENSG00000120833 SOCS2 411541 sc-eQTL 5.58e-01 0.0522 0.0889 0.498 CD4_CTL L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 5.66e-01 -0.0487 0.0847 0.498 CD4_CTL L2
ENSG00000169372 CRADD 303980 sc-eQTL 9.89e-01 -0.00118 0.086 0.498 CD4_CTL L2
ENSG00000173588 CEP83 -478633 sc-eQTL 5.99e-01 0.0456 0.0866 0.498 CD4_CTL L2
ENSG00000173598 NUDT4 603472 sc-eQTL 8.61e-02 -0.144 0.0836 0.498 CD4_CTL L2
ENSG00000177889 UBE2N 539408 sc-eQTL 3.11e-01 -0.0871 0.0858 0.498 CD4_CTL L2
ENSG00000198015 MRPL42 513867 sc-eQTL 9.89e-01 -0.00134 0.0961 0.498 CD4_CTL L2
ENSG00000120833 SOCS2 411541 sc-eQTL 3.68e-02 -0.103 0.0491 0.506 CD4_Naive L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 7.58e-01 -0.0173 0.0561 0.506 CD4_Naive L2
ENSG00000169372 CRADD 303980 sc-eQTL 2.38e-03 0.258 0.0838 0.506 CD4_Naive L2
ENSG00000173588 CEP83 -478633 sc-eQTL 4.46e-01 0.0463 0.0606 0.506 CD4_Naive L2
ENSG00000173598 NUDT4 603472 sc-eQTL 2.80e-01 -0.0543 0.0502 0.506 CD4_Naive L2
ENSG00000177889 UBE2N 539408 sc-eQTL 5.69e-01 0.0276 0.0483 0.506 CD4_Naive L2
ENSG00000198015 MRPL42 513867 sc-eQTL 6.60e-01 0.0358 0.0811 0.506 CD4_Naive L2
ENSG00000120833 SOCS2 411541 sc-eQTL 7.78e-01 -0.016 0.0567 0.506 CD4_TCM L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 6.96e-01 -0.0264 0.0674 0.506 CD4_TCM L2
ENSG00000169372 CRADD 303980 sc-eQTL 8.71e-01 -0.0148 0.0909 0.506 CD4_TCM L2
ENSG00000173588 CEP83 -478633 sc-eQTL 7.43e-01 -0.0235 0.0718 0.506 CD4_TCM L2
ENSG00000173598 NUDT4 603472 sc-eQTL 7.26e-01 -0.02 0.057 0.506 CD4_TCM L2
ENSG00000177889 UBE2N 539408 sc-eQTL 9.66e-01 0.00232 0.0548 0.506 CD4_TCM L2
ENSG00000198015 MRPL42 513867 sc-eQTL 2.94e-01 0.0879 0.0835 0.506 CD4_TCM L2
ENSG00000120833 SOCS2 411541 sc-eQTL 1.70e-01 0.0837 0.0608 0.506 CD4_TEM L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 2.90e-01 -0.0774 0.073 0.506 CD4_TEM L2
ENSG00000169372 CRADD 303980 sc-eQTL 3.53e-01 0.0837 0.0899 0.506 CD4_TEM L2
ENSG00000173588 CEP83 -478633 sc-eQTL 2.20e-02 0.187 0.0812 0.506 CD4_TEM L2
ENSG00000173598 NUDT4 603472 sc-eQTL 7.11e-01 -0.0264 0.0711 0.506 CD4_TEM L2
ENSG00000177889 UBE2N 539408 sc-eQTL 4.56e-03 -0.205 0.0717 0.506 CD4_TEM L2
ENSG00000198015 MRPL42 513867 sc-eQTL 5.29e-01 0.0506 0.0802 0.506 CD4_TEM L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 6.14e-01 0.036 0.0714 0.506 CD8_CTL L2
ENSG00000120833 SOCS2 411541 sc-eQTL 8.85e-01 -0.0104 0.0722 0.506 CD8_CTL L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 6.91e-01 0.0292 0.0732 0.506 CD8_CTL L2
ENSG00000169372 CRADD 303980 sc-eQTL 2.97e-01 -0.0928 0.0888 0.506 CD8_CTL L2
ENSG00000173588 CEP83 -478633 sc-eQTL 1.59e-01 -0.113 0.0803 0.506 CD8_CTL L2
ENSG00000173598 NUDT4 603472 sc-eQTL 2.51e-01 -0.0757 0.0657 0.506 CD8_CTL L2
ENSG00000177889 UBE2N 539408 sc-eQTL 3.17e-01 0.0766 0.0764 0.506 CD8_CTL L2
ENSG00000198015 MRPL42 513867 sc-eQTL 6.51e-01 0.0397 0.0877 0.506 CD8_CTL L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 2.65e-01 0.0732 0.0655 0.506 CD8_Naive L2
ENSG00000120833 SOCS2 411541 sc-eQTL 8.16e-02 0.12 0.0684 0.506 CD8_Naive L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 1.42e-01 -0.113 0.0767 0.506 CD8_Naive L2
ENSG00000169372 CRADD 303980 sc-eQTL 7.87e-01 -0.0241 0.0892 0.506 CD8_Naive L2
ENSG00000173588 CEP83 -478633 sc-eQTL 9.64e-01 -0.0034 0.0743 0.506 CD8_Naive L2
ENSG00000173598 NUDT4 603472 sc-eQTL 4.34e-02 -0.124 0.0611 0.506 CD8_Naive L2
ENSG00000177889 UBE2N 539408 sc-eQTL 1.63e-01 -0.0937 0.067 0.506 CD8_Naive L2
ENSG00000198015 MRPL42 513867 sc-eQTL 9.72e-02 0.142 0.0854 0.506 CD8_Naive L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 7.75e-01 0.0202 0.0704 0.5 CD8_TCM L2
ENSG00000120833 SOCS2 411541 sc-eQTL 9.20e-01 0.00793 0.0785 0.5 CD8_TCM L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 1.06e-02 -0.224 0.0868 0.5 CD8_TCM L2
ENSG00000169372 CRADD 303980 sc-eQTL 6.69e-01 0.0399 0.0932 0.5 CD8_TCM L2
ENSG00000173588 CEP83 -478633 sc-eQTL 2.30e-01 0.109 0.0902 0.5 CD8_TCM L2
ENSG00000173598 NUDT4 603472 sc-eQTL 4.37e-01 -0.0576 0.074 0.5 CD8_TCM L2
ENSG00000177889 UBE2N 539408 sc-eQTL 2.19e-02 -0.201 0.087 0.5 CD8_TCM L2
ENSG00000198015 MRPL42 513867 sc-eQTL 8.52e-01 0.0169 0.0903 0.5 CD8_TCM L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 3.87e-01 -0.067 0.0774 0.5 CD8_TEM L2
ENSG00000120833 SOCS2 411541 sc-eQTL 2.62e-01 0.0926 0.0824 0.5 CD8_TEM L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 8.53e-01 -0.0162 0.087 0.5 CD8_TEM L2
ENSG00000169372 CRADD 303980 sc-eQTL 2.12e-01 -0.115 0.0918 0.5 CD8_TEM L2
ENSG00000173588 CEP83 -478633 sc-eQTL 4.29e-01 -0.071 0.0896 0.5 CD8_TEM L2
ENSG00000173598 NUDT4 603472 sc-eQTL 6.98e-01 0.0329 0.0848 0.5 CD8_TEM L2
ENSG00000177889 UBE2N 539408 sc-eQTL 3.01e-01 0.0838 0.0809 0.5 CD8_TEM L2
ENSG00000198015 MRPL42 513867 sc-eQTL 6.82e-01 0.0344 0.084 0.5 CD8_TEM L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 1.22e-01 0.115 0.0743 0.504 MAIT L2
ENSG00000120833 SOCS2 411541 sc-eQTL 9.50e-01 -0.00497 0.0795 0.504 MAIT L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 1.75e-01 -0.0992 0.0729 0.504 MAIT L2
ENSG00000169372 CRADD 303980 sc-eQTL 3.00e-01 -0.0965 0.0928 0.504 MAIT L2
ENSG00000173588 CEP83 -478633 sc-eQTL 1.82e-01 -0.112 0.0835 0.504 MAIT L2
ENSG00000173598 NUDT4 603472 sc-eQTL 5.38e-01 -0.0417 0.0675 0.504 MAIT L2
ENSG00000177889 UBE2N 539408 sc-eQTL 1.92e-01 -0.108 0.0825 0.504 MAIT L2
ENSG00000198015 MRPL42 513867 sc-eQTL 2.46e-01 -0.0982 0.0844 0.504 MAIT L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 5.88e-01 -0.0478 0.088 0.498 NK_CD56bright L2
ENSG00000120833 SOCS2 411541 sc-eQTL 4.97e-02 0.156 0.0792 0.498 NK_CD56bright L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 1.92e-01 0.101 0.0775 0.498 NK_CD56bright L2
ENSG00000169372 CRADD 303980 sc-eQTL 3.75e-01 0.0839 0.0944 0.498 NK_CD56bright L2
ENSG00000173588 CEP83 -478633 sc-eQTL 7.80e-01 -0.0221 0.0788 0.498 NK_CD56bright L2
ENSG00000173598 NUDT4 603472 sc-eQTL 8.30e-01 -0.0182 0.0843 0.498 NK_CD56bright L2
ENSG00000177889 UBE2N 539408 sc-eQTL 7.39e-01 0.0299 0.0895 0.498 NK_CD56bright L2
ENSG00000198015 MRPL42 513867 sc-eQTL 4.04e-01 0.0744 0.089 0.498 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 409587 sc-eQTL 2.31e-01 0.0994 0.0828 0.498 NK_CD56bright L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 6.80e-01 0.0316 0.0764 0.502 NK_CD56dim L2
ENSG00000120833 SOCS2 411541 sc-eQTL 7.24e-01 -0.0231 0.0652 0.502 NK_CD56dim L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 9.30e-01 -0.0062 0.0709 0.502 NK_CD56dim L2
ENSG00000169372 CRADD 303980 sc-eQTL 6.06e-01 0.0477 0.0923 0.502 NK_CD56dim L2
ENSG00000173588 CEP83 -478633 sc-eQTL 2.99e-02 -0.177 0.081 0.502 NK_CD56dim L2
ENSG00000173598 NUDT4 603472 sc-eQTL 3.90e-01 -0.0563 0.0653 0.502 NK_CD56dim L2
ENSG00000177889 UBE2N 539408 sc-eQTL 7.52e-01 0.0199 0.0629 0.502 NK_CD56dim L2
ENSG00000198015 MRPL42 513867 sc-eQTL 4.66e-01 0.0635 0.087 0.502 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 409587 sc-eQTL 3.56e-01 -0.0827 0.0894 0.502 NK_CD56dim L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 8.50e-01 0.0161 0.0849 0.5 NK_HLA L2
ENSG00000120833 SOCS2 411541 sc-eQTL 5.02e-01 0.0566 0.0841 0.5 NK_HLA L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 3.27e-01 -0.0754 0.0767 0.5 NK_HLA L2
ENSG00000169372 CRADD 303980 sc-eQTL 4.48e-01 -0.0715 0.0941 0.5 NK_HLA L2
ENSG00000173588 CEP83 -478633 sc-eQTL 1.09e-01 0.141 0.0878 0.5 NK_HLA L2
ENSG00000173598 NUDT4 603472 sc-eQTL 2.65e-01 -0.0878 0.0786 0.5 NK_HLA L2
ENSG00000177889 UBE2N 539408 sc-eQTL 7.28e-01 -0.0308 0.0883 0.5 NK_HLA L2
ENSG00000198015 MRPL42 513867 sc-eQTL 6.72e-01 -0.0417 0.0984 0.5 NK_HLA L2
ENSG00000246985 SOCS2-AS1 409587 sc-eQTL 4.00e-01 0.0671 0.0795 0.5 NK_HLA L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 8.07e-01 0.02 0.082 0.502 NK_cytokine L2
ENSG00000120833 SOCS2 411541 sc-eQTL 1.94e-01 0.0931 0.0714 0.502 NK_cytokine L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 9.91e-01 -0.000848 0.0727 0.502 NK_cytokine L2
ENSG00000169372 CRADD 303980 sc-eQTL 9.66e-01 -0.00344 0.0812 0.502 NK_cytokine L2
ENSG00000173588 CEP83 -478633 sc-eQTL 4.21e-01 0.0673 0.0834 0.502 NK_cytokine L2
ENSG00000173598 NUDT4 603472 sc-eQTL 2.14e-01 -0.0792 0.0636 0.502 NK_cytokine L2
ENSG00000177889 UBE2N 539408 sc-eQTL 7.94e-01 -0.0192 0.0734 0.502 NK_cytokine L2
ENSG00000198015 MRPL42 513867 sc-eQTL 9.53e-01 0.00498 0.0851 0.502 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 409587 sc-eQTL 7.07e-01 0.032 0.0851 0.502 NK_cytokine L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 8.73e-01 -0.0158 0.0982 0.552 PB L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 3.13e-01 0.102 0.1 0.552 PB L2
ENSG00000169372 CRADD 303980 sc-eQTL 5.42e-01 -0.0566 0.0926 0.552 PB L2
ENSG00000173588 CEP83 -478633 sc-eQTL 1.39e-01 0.154 0.104 0.552 PB L2
ENSG00000173598 NUDT4 603472 sc-eQTL 3.73e-01 -0.0773 0.0864 0.552 PB L2
ENSG00000177889 UBE2N 539408 sc-eQTL 3.81e-01 -0.0669 0.0761 0.552 PB L2
ENSG00000198015 MRPL42 513867 sc-eQTL 2.01e-01 -0.134 0.104 0.552 PB L2
ENSG00000257345 LINC02413 982137 sc-eQTL 2.24e-01 0.124 0.101 0.552 PB L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 8.79e-01 -0.0115 0.0751 0.504 Pro_T L2
ENSG00000120833 SOCS2 411541 sc-eQTL 4.27e-01 -0.0638 0.0802 0.504 Pro_T L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 5.16e-01 -0.0556 0.0854 0.504 Pro_T L2
ENSG00000169372 CRADD 303980 sc-eQTL 4.53e-01 -0.0627 0.0834 0.504 Pro_T L2
ENSG00000173588 CEP83 -478633 sc-eQTL 7.62e-01 -0.0257 0.0846 0.504 Pro_T L2
ENSG00000173598 NUDT4 603472 sc-eQTL 1.94e-01 0.0877 0.0674 0.504 Pro_T L2
ENSG00000177889 UBE2N 539408 sc-eQTL 5.00e-01 -0.0421 0.0623 0.504 Pro_T L2
ENSG00000198015 MRPL42 513867 sc-eQTL 6.95e-01 -0.0294 0.0749 0.504 Pro_T L2
ENSG00000120833 SOCS2 411541 sc-eQTL 9.64e-01 0.00342 0.0753 0.506 Treg L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 3.55e-01 -0.0734 0.0792 0.506 Treg L2
ENSG00000169372 CRADD 303980 sc-eQTL 5.74e-01 0.0515 0.0916 0.506 Treg L2
ENSG00000173588 CEP83 -478633 sc-eQTL 8.40e-01 -0.0171 0.085 0.506 Treg L2
ENSG00000173598 NUDT4 603472 sc-eQTL 5.62e-01 -0.0377 0.0649 0.506 Treg L2
ENSG00000177889 UBE2N 539408 sc-eQTL 6.93e-02 0.127 0.0695 0.506 Treg L2
ENSG00000198015 MRPL42 513867 sc-eQTL 9.48e-01 -0.00577 0.0882 0.506 Treg L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 6.41e-01 0.0447 0.0957 0.493 cDC L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 6.50e-01 -0.038 0.0836 0.493 cDC L2
ENSG00000169372 CRADD 303980 sc-eQTL 4.11e-01 0.076 0.0923 0.493 cDC L2
ENSG00000173588 CEP83 -478633 sc-eQTL 4.42e-01 0.0604 0.0783 0.493 cDC L2
ENSG00000173598 NUDT4 603472 sc-eQTL 8.80e-01 0.0142 0.0939 0.493 cDC L2
ENSG00000177889 UBE2N 539408 sc-eQTL 4.48e-01 0.062 0.0816 0.493 cDC L2
ENSG00000198015 MRPL42 513867 sc-eQTL 7.67e-01 -0.0277 0.0936 0.493 cDC L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 1.34e-01 0.103 0.0685 0.506 cMono_IL1B L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 3.65e-01 -0.055 0.0606 0.506 cMono_IL1B L2
ENSG00000169372 CRADD 303980 sc-eQTL 8.06e-01 -0.0222 0.0903 0.506 cMono_IL1B L2
ENSG00000173588 CEP83 -478633 sc-eQTL 1.90e-01 -0.108 0.0824 0.506 cMono_IL1B L2
ENSG00000173598 NUDT4 603472 sc-eQTL 6.78e-01 -0.0274 0.0661 0.506 cMono_IL1B L2
ENSG00000177889 UBE2N 539408 sc-eQTL 3.13e-01 0.0523 0.0517 0.506 cMono_IL1B L2
ENSG00000198015 MRPL42 513867 sc-eQTL 5.24e-01 0.0458 0.0718 0.506 cMono_IL1B L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 5.42e-01 0.0476 0.0778 0.506 cMono_S100A L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 7.82e-01 0.0176 0.0635 0.506 cMono_S100A L2
ENSG00000169372 CRADD 303980 sc-eQTL 5.24e-01 0.0621 0.0971 0.506 cMono_S100A L2
ENSG00000173588 CEP83 -478633 sc-eQTL 5.77e-01 0.0502 0.0898 0.506 cMono_S100A L2
ENSG00000173598 NUDT4 603472 sc-eQTL 6.77e-01 -0.0319 0.0764 0.506 cMono_S100A L2
ENSG00000177889 UBE2N 539408 sc-eQTL 5.45e-01 -0.0403 0.0665 0.506 cMono_S100A L2
ENSG00000198015 MRPL42 513867 sc-eQTL 4.58e-01 0.0567 0.0762 0.506 cMono_S100A L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 1.96e-02 -0.199 0.0841 0.497 gdT L2
ENSG00000120833 SOCS2 411541 sc-eQTL 6.83e-01 0.0423 0.103 0.497 gdT L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 1.41e-01 0.159 0.107 0.497 gdT L2
ENSG00000169372 CRADD 303980 sc-eQTL 3.21e-02 -0.226 0.104 0.497 gdT L2
ENSG00000173588 CEP83 -478633 sc-eQTL 9.38e-01 0.00823 0.106 0.497 gdT L2
ENSG00000173598 NUDT4 603472 sc-eQTL 3.20e-02 0.215 0.0992 0.497 gdT L2
ENSG00000177889 UBE2N 539408 sc-eQTL 7.53e-01 0.0348 0.11 0.497 gdT L2
ENSG00000198015 MRPL42 513867 sc-eQTL 7.59e-01 -0.033 0.107 0.497 gdT L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 8.01e-01 -0.0236 0.0934 0.507 intMono L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 2.95e-01 0.0825 0.0786 0.507 intMono L2
ENSG00000169372 CRADD 303980 sc-eQTL 4.01e-01 0.0762 0.0906 0.507 intMono L2
ENSG00000173588 CEP83 -478633 sc-eQTL 8.12e-01 -0.0226 0.0949 0.507 intMono L2
ENSG00000173598 NUDT4 603472 sc-eQTL 6.65e-01 -0.0358 0.0826 0.507 intMono L2
ENSG00000177889 UBE2N 539408 sc-eQTL 6.26e-01 -0.0384 0.0786 0.507 intMono L2
ENSG00000198015 MRPL42 513867 sc-eQTL 9.25e-01 0.00804 0.0847 0.507 intMono L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 2.98e-01 0.0862 0.0826 0.502 ncMono L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 6.59e-01 -0.0252 0.057 0.502 ncMono L2
ENSG00000169372 CRADD 303980 sc-eQTL 1.42e-01 0.13 0.0884 0.502 ncMono L2
ENSG00000173588 CEP83 -478633 sc-eQTL 1.25e-01 -0.137 0.0887 0.502 ncMono L2
ENSG00000173598 NUDT4 603472 sc-eQTL 6.15e-01 -0.0393 0.078 0.502 ncMono L2
ENSG00000177889 UBE2N 539408 sc-eQTL 2.28e-01 0.0918 0.0758 0.502 ncMono L2
ENSG00000198015 MRPL42 513867 sc-eQTL 5.41e-01 0.0483 0.0788 0.502 ncMono L2
ENSG00000057704 TMCC3 -669202 sc-eQTL 3.58e-01 0.0894 0.0969 0.486 pDC L2
ENSG00000136040 PLXNC1 -167222 sc-eQTL 4.15e-01 -0.0789 0.0965 0.486 pDC L2
ENSG00000169372 CRADD 303980 sc-eQTL 2.92e-01 0.103 0.0975 0.486 pDC L2
ENSG00000173588 CEP83 -478633 sc-eQTL 8.84e-01 -0.0153 0.104 0.486 pDC L2
ENSG00000173598 NUDT4 603472 sc-eQTL 4.62e-01 0.062 0.0841 0.486 pDC L2
ENSG00000177889 UBE2N 539408 sc-eQTL 6.62e-01 -0.0437 0.0998 0.486 pDC L2
ENSG00000198015 MRPL42 513867 sc-eQTL 3.98e-01 -0.0872 0.103 0.486 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -669202 sc-eQTL 5.28e-01 0.0565 0.0896 0.506 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -167222 sc-eQTL 9.84e-01 0.00108 0.0542 0.506 B_Memory LOneK1K
ENSG00000169372 CRADD 303980 sc-eQTL 2.13e-01 0.115 0.092 0.506 B_Memory LOneK1K
ENSG00000173588 CEP83 -478633 sc-eQTL 2.95e-01 -0.0792 0.0755 0.506 B_Memory LOneK1K
ENSG00000173598 NUDT4 603472 sc-eQTL 8.00e-01 -0.0138 0.0546 0.506 B_Memory LOneK1K
ENSG00000177889 UBE2N 539408 sc-eQTL 9.26e-02 -0.0835 0.0494 0.506 B_Memory LOneK1K
ENSG00000198015 MRPL42 513867 sc-eQTL 4.12e-01 0.0666 0.0809 0.506 B_Memory LOneK1K
ENSG00000257345 LINC02413 982137 sc-eQTL 4.44e-01 0.0647 0.0843 0.506 B_Memory LOneK1K
ENSG00000057704 TMCC3 -669202 sc-eQTL 8.21e-01 0.0183 0.081 0.506 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -167222 sc-eQTL 6.02e-01 0.0343 0.0657 0.506 B_Naive LOneK1K
ENSG00000169372 CRADD 303980 sc-eQTL 9.11e-02 0.147 0.0865 0.506 B_Naive LOneK1K
ENSG00000173588 CEP83 -478633 sc-eQTL 4.13e-01 0.0561 0.0684 0.506 B_Naive LOneK1K
ENSG00000173598 NUDT4 603472 sc-eQTL 7.42e-01 0.021 0.0636 0.506 B_Naive LOneK1K
ENSG00000177889 UBE2N 539408 sc-eQTL 9.72e-01 0.00232 0.0652 0.506 B_Naive LOneK1K
ENSG00000198015 MRPL42 513867 sc-eQTL 8.80e-01 -0.0122 0.0803 0.506 B_Naive LOneK1K
ENSG00000257345 LINC02413 982137 sc-eQTL 6.25e-01 -0.0404 0.0825 0.506 B_Naive LOneK1K
ENSG00000057704 TMCC3 -669202 sc-eQTL 1.56e-01 0.0891 0.0626 0.506 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -167222 sc-eQTL 7.20e-01 -0.02 0.0557 0.506 CD14_Mono LOneK1K
ENSG00000169372 CRADD 303980 sc-eQTL 9.43e-01 0.00644 0.0899 0.506 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -478633 sc-eQTL 6.97e-01 -0.0296 0.076 0.506 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 603472 sc-eQTL 2.29e-01 -0.0774 0.0642 0.506 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 539408 sc-eQTL 7.12e-01 -0.0179 0.0485 0.506 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 513867 sc-eQTL 1.65e-01 0.0933 0.0669 0.506 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 -669202 sc-eQTL 5.91e-01 0.0449 0.0833 0.506 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -167222 sc-eQTL 7.08e-01 0.0199 0.0532 0.506 CD16_Mono LOneK1K
ENSG00000169372 CRADD 303980 sc-eQTL 1.14e-01 0.152 0.0956 0.506 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -478633 sc-eQTL 5.10e-01 -0.0582 0.0883 0.506 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 603472 sc-eQTL 8.55e-01 0.0132 0.0719 0.506 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 539408 sc-eQTL 4.69e-01 0.0522 0.0719 0.506 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 513867 sc-eQTL 3.32e-01 0.0737 0.0758 0.506 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 -669202 sc-eQTL 5.17e-01 0.0487 0.075 0.502 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 411541 sc-eQTL 3.36e-01 0.0562 0.0583 0.502 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -167222 sc-eQTL 4.08e-01 -0.0529 0.0638 0.502 NK_CD56dim LOneK1K
ENSG00000169372 CRADD 303980 sc-eQTL 9.25e-01 -0.00853 0.0902 0.502 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -478633 sc-eQTL 1.52e-01 -0.103 0.0715 0.502 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 603472 sc-eQTL 3.58e-02 -0.12 0.0567 0.502 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 539408 sc-eQTL 8.82e-01 -0.00821 0.0554 0.502 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 513867 sc-eQTL 6.58e-01 0.0367 0.0827 0.502 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 409587 sc-eQTL 9.43e-01 0.00652 0.0908 0.502 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136040 PLXNC1 -167222 eQTL 0.0137 0.02 0.00809 0.0 0.0 0.494

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000169372 \N 303980 1.33e-06 9.44e-07 3.08e-07 4.72e-07 2.58e-07 4.39e-07 1.18e-06 3.22e-07 1.14e-06 3.77e-07 1.35e-06 5.93e-07 1.73e-06 2.61e-07 4.19e-07 7.13e-07 7.73e-07 5.8e-07 5.07e-07 6.44e-07 3.61e-07 1.08e-06 7.96e-07 5.79e-07 1.92e-06 3.28e-07 6.53e-07 6e-07 1.02e-06 1.07e-06 5.3e-07 9.48e-08 2.27e-07 5.28e-07 4.22e-07 4.09e-07 4.21e-07 1.4e-07 2.94e-07 9.07e-08 3.05e-07 1.43e-06 7.6e-08 1.92e-08 2.01e-07 7.77e-08 2.08e-07 8.66e-08 9.32e-08