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Genes within 1Mb (chr12:93976322:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -674235 sc-eQTL 4.65e-01 -0.0625 0.0854 0.406 B L1
ENSG00000136040 PLXNC1 -172255 sc-eQTL 8.80e-01 0.00735 0.0485 0.406 B L1
ENSG00000169372 CRADD 298947 sc-eQTL 8.90e-02 -0.125 0.0729 0.406 B L1
ENSG00000173588 CEP83 -483666 sc-eQTL 1.19e-01 -0.0953 0.0608 0.406 B L1
ENSG00000173598 NUDT4 598439 sc-eQTL 5.76e-01 0.0306 0.0545 0.406 B L1
ENSG00000177889 UBE2N 534375 sc-eQTL 1.03e-01 0.0784 0.0478 0.406 B L1
ENSG00000198015 MRPL42 508834 sc-eQTL 1.73e-01 -0.102 0.0748 0.406 B L1
ENSG00000257345 LINC02413 977104 sc-eQTL 8.86e-01 0.0107 0.0747 0.406 B L1
ENSG00000120833 SOCS2 406508 sc-eQTL 4.32e-01 0.0387 0.0491 0.406 CD4T L1
ENSG00000136040 PLXNC1 -172255 sc-eQTL 1.55e-01 0.0734 0.0514 0.406 CD4T L1
ENSG00000169372 CRADD 298947 sc-eQTL 2.56e-01 -0.096 0.0843 0.406 CD4T L1
ENSG00000173588 CEP83 -483666 sc-eQTL 8.80e-01 -0.00817 0.0541 0.406 CD4T L1
ENSG00000173598 NUDT4 598439 sc-eQTL 4.57e-01 0.0363 0.0488 0.406 CD4T L1
ENSG00000177889 UBE2N 534375 sc-eQTL 7.26e-01 0.0159 0.0453 0.406 CD4T L1
ENSG00000198015 MRPL42 508834 sc-eQTL 3.46e-01 -0.0742 0.0786 0.406 CD4T L1
ENSG00000057704 TMCC3 -674235 sc-eQTL 4.70e-01 -0.0352 0.0486 0.406 CD8T L1
ENSG00000120833 SOCS2 406508 sc-eQTL 9.85e-02 -0.107 0.0647 0.406 CD8T L1
ENSG00000136040 PLXNC1 -172255 sc-eQTL 5.94e-01 0.0358 0.067 0.406 CD8T L1
ENSG00000169372 CRADD 298947 sc-eQTL 5.84e-01 0.0432 0.0788 0.406 CD8T L1
ENSG00000173588 CEP83 -483666 sc-eQTL 5.22e-01 0.0401 0.0625 0.406 CD8T L1
ENSG00000173598 NUDT4 598439 sc-eQTL 5.29e-02 0.0903 0.0464 0.406 CD8T L1
ENSG00000177889 UBE2N 534375 sc-eQTL 3.28e-01 0.0569 0.0581 0.406 CD8T L1
ENSG00000198015 MRPL42 508834 sc-eQTL 8.80e-02 -0.141 0.0824 0.406 CD8T L1
ENSG00000057704 TMCC3 -674235 sc-eQTL 7.26e-01 0.0326 0.0927 0.408 DC L1
ENSG00000136040 PLXNC1 -172255 sc-eQTL 1.57e-01 0.117 0.0826 0.408 DC L1
ENSG00000169372 CRADD 298947 sc-eQTL 8.01e-01 -0.0237 0.0937 0.408 DC L1
ENSG00000173588 CEP83 -483666 sc-eQTL 3.73e-02 -0.153 0.0731 0.408 DC L1
ENSG00000173598 NUDT4 598439 sc-eQTL 1.40e-01 -0.113 0.0766 0.408 DC L1
ENSG00000177889 UBE2N 534375 sc-eQTL 6.48e-01 0.0355 0.0778 0.408 DC L1
ENSG00000198015 MRPL42 508834 sc-eQTL 9.37e-01 0.0071 0.0894 0.408 DC L1
ENSG00000057704 TMCC3 -674235 sc-eQTL 1.61e-01 -0.0873 0.062 0.406 Mono L1
ENSG00000136040 PLXNC1 -172255 sc-eQTL 8.34e-01 -0.0108 0.0517 0.406 Mono L1
ENSG00000169372 CRADD 298947 sc-eQTL 5.59e-01 -0.0556 0.095 0.406 Mono L1
ENSG00000173588 CEP83 -483666 sc-eQTL 9.79e-01 -0.00201 0.0763 0.406 Mono L1
ENSG00000173598 NUDT4 598439 sc-eQTL 4.53e-01 0.0492 0.0655 0.406 Mono L1
ENSG00000177889 UBE2N 534375 sc-eQTL 4.89e-01 0.034 0.0491 0.406 Mono L1
ENSG00000198015 MRPL42 508834 sc-eQTL 2.45e-01 -0.0769 0.066 0.406 Mono L1
ENSG00000057704 TMCC3 -674235 sc-eQTL 1.37e-01 -0.113 0.0758 0.408 NK L1
ENSG00000120833 SOCS2 406508 sc-eQTL 5.00e-01 -0.0403 0.0597 0.408 NK L1
ENSG00000136040 PLXNC1 -172255 sc-eQTL 8.18e-01 -0.0143 0.0624 0.408 NK L1
ENSG00000169372 CRADD 298947 sc-eQTL 5.38e-01 -0.0552 0.0895 0.408 NK L1
ENSG00000173588 CEP83 -483666 sc-eQTL 7.93e-01 0.0186 0.0709 0.408 NK L1
ENSG00000173598 NUDT4 598439 sc-eQTL 3.23e-02 0.123 0.0573 0.408 NK L1
ENSG00000177889 UBE2N 534375 sc-eQTL 1.83e-01 0.0763 0.0571 0.408 NK L1
ENSG00000198015 MRPL42 508834 sc-eQTL 4.94e-01 -0.0561 0.0818 0.408 NK L1
ENSG00000246985 SOCS2-AS1 404554 sc-eQTL 5.30e-01 -0.0587 0.0933 0.408 NK L1
ENSG00000057704 TMCC3 -674235 sc-eQTL 9.25e-01 -0.00719 0.0766 0.406 Other_T L1
ENSG00000120833 SOCS2 406508 sc-eQTL 8.51e-01 -0.0142 0.0755 0.406 Other_T L1
ENSG00000136040 PLXNC1 -172255 sc-eQTL 2.00e-01 0.0907 0.0706 0.406 Other_T L1
ENSG00000169372 CRADD 298947 sc-eQTL 9.95e-01 -0.00053 0.0857 0.406 Other_T L1
ENSG00000173588 CEP83 -483666 sc-eQTL 4.85e-01 0.0556 0.0796 0.406 Other_T L1
ENSG00000173598 NUDT4 598439 sc-eQTL 3.51e-01 -0.057 0.0611 0.406 Other_T L1
ENSG00000177889 UBE2N 534375 sc-eQTL 2.93e-02 0.123 0.0561 0.406 Other_T L1
ENSG00000198015 MRPL42 508834 sc-eQTL 9.95e-01 0.000451 0.0671 0.406 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -674235 sc-eQTL 8.73e-01 -0.014 0.0873 0.416 B_Activated L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 5.20e-01 -0.0531 0.0824 0.416 B_Activated L2
ENSG00000169372 CRADD 298947 sc-eQTL 6.46e-01 -0.0445 0.0967 0.416 B_Activated L2
ENSG00000173588 CEP83 -483666 sc-eQTL 1.97e-01 0.132 0.102 0.416 B_Activated L2
ENSG00000173598 NUDT4 598439 sc-eQTL 1.36e-01 0.128 0.0856 0.416 B_Activated L2
ENSG00000177889 UBE2N 534375 sc-eQTL 4.65e-01 -0.0782 0.107 0.416 B_Activated L2
ENSG00000198015 MRPL42 508834 sc-eQTL 9.06e-01 0.0123 0.104 0.416 B_Activated L2
ENSG00000257345 LINC02413 977104 sc-eQTL 9.54e-01 -0.00581 0.101 0.416 B_Activated L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 7.05e-01 -0.0335 0.0884 0.406 B_Intermediate L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 6.78e-01 0.0309 0.0744 0.406 B_Intermediate L2
ENSG00000169372 CRADD 298947 sc-eQTL 4.96e-01 -0.0603 0.0883 0.406 B_Intermediate L2
ENSG00000173588 CEP83 -483666 sc-eQTL 2.74e-01 -0.0901 0.0822 0.406 B_Intermediate L2
ENSG00000173598 NUDT4 598439 sc-eQTL 4.59e-01 0.0546 0.0736 0.406 B_Intermediate L2
ENSG00000177889 UBE2N 534375 sc-eQTL 5.41e-02 0.144 0.0744 0.406 B_Intermediate L2
ENSG00000198015 MRPL42 508834 sc-eQTL 1.68e-01 -0.126 0.091 0.406 B_Intermediate L2
ENSG00000257345 LINC02413 977104 sc-eQTL 8.58e-01 -0.0161 0.0902 0.406 B_Intermediate L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 8.83e-02 -0.159 0.093 0.405 B_Memory L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 8.76e-01 -0.0113 0.0725 0.405 B_Memory L2
ENSG00000169372 CRADD 298947 sc-eQTL 4.53e-01 -0.0712 0.0947 0.405 B_Memory L2
ENSG00000173588 CEP83 -483666 sc-eQTL 1.36e-01 0.126 0.0841 0.405 B_Memory L2
ENSG00000173598 NUDT4 598439 sc-eQTL 8.77e-01 0.0105 0.0679 0.405 B_Memory L2
ENSG00000177889 UBE2N 534375 sc-eQTL 5.36e-02 0.117 0.0602 0.405 B_Memory L2
ENSG00000198015 MRPL42 508834 sc-eQTL 1.73e-01 -0.123 0.0899 0.405 B_Memory L2
ENSG00000257345 LINC02413 977104 sc-eQTL 3.11e-01 0.0915 0.09 0.405 B_Memory L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 4.85e-01 0.0608 0.0868 0.406 B_Naive1 L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 4.26e-01 -0.0588 0.0737 0.406 B_Naive1 L2
ENSG00000169372 CRADD 298947 sc-eQTL 2.72e-01 -0.102 0.0924 0.406 B_Naive1 L2
ENSG00000173588 CEP83 -483666 sc-eQTL 7.11e-01 -0.0283 0.0763 0.406 B_Naive1 L2
ENSG00000173598 NUDT4 598439 sc-eQTL 7.65e-01 -0.0199 0.0663 0.406 B_Naive1 L2
ENSG00000177889 UBE2N 534375 sc-eQTL 6.18e-01 -0.0356 0.0713 0.406 B_Naive1 L2
ENSG00000198015 MRPL42 508834 sc-eQTL 2.05e-01 -0.104 0.0821 0.406 B_Naive1 L2
ENSG00000257345 LINC02413 977104 sc-eQTL 2.28e-01 0.105 0.0871 0.406 B_Naive1 L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 6.45e-02 -0.16 0.0861 0.408 B_Naive2 L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 3.12e-01 -0.0821 0.081 0.408 B_Naive2 L2
ENSG00000169372 CRADD 298947 sc-eQTL 4.03e-01 -0.0766 0.0913 0.408 B_Naive2 L2
ENSG00000173588 CEP83 -483666 sc-eQTL 7.36e-02 -0.153 0.0851 0.408 B_Naive2 L2
ENSG00000173598 NUDT4 598439 sc-eQTL 8.88e-01 -0.0107 0.0756 0.408 B_Naive2 L2
ENSG00000177889 UBE2N 534375 sc-eQTL 1.47e-01 0.107 0.0736 0.408 B_Naive2 L2
ENSG00000198015 MRPL42 508834 sc-eQTL 4.89e-01 -0.0664 0.0958 0.408 B_Naive2 L2
ENSG00000257345 LINC02413 977104 sc-eQTL 5.94e-01 0.0491 0.092 0.408 B_Naive2 L2
ENSG00000120833 SOCS2 406508 sc-eQTL 3.02e-01 -0.0945 0.0914 0.414 CD4_CTL L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 5.82e-01 -0.0482 0.0873 0.414 CD4_CTL L2
ENSG00000169372 CRADD 298947 sc-eQTL 2.08e-01 -0.112 0.0883 0.414 CD4_CTL L2
ENSG00000173588 CEP83 -483666 sc-eQTL 8.16e-01 -0.0208 0.0893 0.414 CD4_CTL L2
ENSG00000173598 NUDT4 598439 sc-eQTL 2.61e-02 0.192 0.0857 0.414 CD4_CTL L2
ENSG00000177889 UBE2N 534375 sc-eQTL 2.57e-01 0.1 0.0883 0.414 CD4_CTL L2
ENSG00000198015 MRPL42 508834 sc-eQTL 5.45e-01 -0.06 0.0989 0.414 CD4_CTL L2
ENSG00000120833 SOCS2 406508 sc-eQTL 1.19e-01 0.0793 0.0507 0.406 CD4_Naive L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 2.68e-01 0.0638 0.0575 0.406 CD4_Naive L2
ENSG00000169372 CRADD 298947 sc-eQTL 9.38e-02 -0.147 0.0874 0.406 CD4_Naive L2
ENSG00000173588 CEP83 -483666 sc-eQTL 7.93e-01 0.0164 0.0623 0.406 CD4_Naive L2
ENSG00000173598 NUDT4 598439 sc-eQTL 3.78e-01 0.0456 0.0516 0.406 CD4_Naive L2
ENSG00000177889 UBE2N 534375 sc-eQTL 6.19e-01 -0.0247 0.0496 0.406 CD4_Naive L2
ENSG00000198015 MRPL42 508834 sc-eQTL 4.61e-01 -0.0614 0.0832 0.406 CD4_Naive L2
ENSG00000120833 SOCS2 406508 sc-eQTL 8.36e-01 0.012 0.0579 0.406 CD4_TCM L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 3.57e-01 0.0634 0.0686 0.406 CD4_TCM L2
ENSG00000169372 CRADD 298947 sc-eQTL 2.87e-01 0.0989 0.0925 0.406 CD4_TCM L2
ENSG00000173588 CEP83 -483666 sc-eQTL 9.81e-01 -0.00172 0.0733 0.406 CD4_TCM L2
ENSG00000173598 NUDT4 598439 sc-eQTL 7.08e-01 -0.0218 0.0582 0.406 CD4_TCM L2
ENSG00000177889 UBE2N 534375 sc-eQTL 9.59e-01 -0.00289 0.056 0.406 CD4_TCM L2
ENSG00000198015 MRPL42 508834 sc-eQTL 3.57e-01 -0.0787 0.0852 0.406 CD4_TCM L2
ENSG00000120833 SOCS2 406508 sc-eQTL 9.47e-02 -0.105 0.0625 0.406 CD4_TEM L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 1.73e-01 0.103 0.075 0.406 CD4_TEM L2
ENSG00000169372 CRADD 298947 sc-eQTL 5.45e-01 -0.0563 0.0927 0.406 CD4_TEM L2
ENSG00000173588 CEP83 -483666 sc-eQTL 3.53e-02 -0.177 0.0838 0.406 CD4_TEM L2
ENSG00000173598 NUDT4 598439 sc-eQTL 6.44e-01 -0.0338 0.0731 0.406 CD4_TEM L2
ENSG00000177889 UBE2N 534375 sc-eQTL 1.10e-02 0.19 0.074 0.406 CD4_TEM L2
ENSG00000198015 MRPL42 508834 sc-eQTL 4.26e-01 -0.0657 0.0825 0.406 CD4_TEM L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 7.17e-01 -0.0267 0.0736 0.406 CD8_CTL L2
ENSG00000120833 SOCS2 406508 sc-eQTL 5.31e-01 -0.0467 0.0743 0.406 CD8_CTL L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 5.66e-01 -0.0434 0.0754 0.406 CD8_CTL L2
ENSG00000169372 CRADD 298947 sc-eQTL 3.23e-01 0.0907 0.0915 0.406 CD8_CTL L2
ENSG00000173588 CEP83 -483666 sc-eQTL 2.51e-01 0.0954 0.0829 0.406 CD8_CTL L2
ENSG00000173598 NUDT4 598439 sc-eQTL 2.95e-01 0.0711 0.0678 0.406 CD8_CTL L2
ENSG00000177889 UBE2N 534375 sc-eQTL 8.35e-01 -0.0165 0.0789 0.406 CD8_CTL L2
ENSG00000198015 MRPL42 508834 sc-eQTL 2.53e-01 -0.103 0.0902 0.406 CD8_CTL L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 4.98e-01 -0.0453 0.0668 0.406 CD8_Naive L2
ENSG00000120833 SOCS2 406508 sc-eQTL 1.74e-01 -0.0952 0.0698 0.406 CD8_Naive L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 2.30e-01 0.094 0.0782 0.406 CD8_Naive L2
ENSG00000169372 CRADD 298947 sc-eQTL 7.60e-01 0.0277 0.0908 0.406 CD8_Naive L2
ENSG00000173588 CEP83 -483666 sc-eQTL 7.82e-01 0.021 0.0756 0.406 CD8_Naive L2
ENSG00000173598 NUDT4 598439 sc-eQTL 4.71e-02 0.124 0.0622 0.406 CD8_Naive L2
ENSG00000177889 UBE2N 534375 sc-eQTL 2.06e-01 0.0866 0.0683 0.406 CD8_Naive L2
ENSG00000198015 MRPL42 508834 sc-eQTL 7.39e-03 -0.233 0.086 0.406 CD8_Naive L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 7.01e-01 -0.0281 0.0731 0.41 CD8_TCM L2
ENSG00000120833 SOCS2 406508 sc-eQTL 2.09e-01 -0.102 0.0811 0.41 CD8_TCM L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 2.70e-02 0.201 0.0904 0.41 CD8_TCM L2
ENSG00000169372 CRADD 298947 sc-eQTL 1.97e-01 -0.125 0.0963 0.41 CD8_TCM L2
ENSG00000173588 CEP83 -483666 sc-eQTL 4.26e-02 -0.19 0.0929 0.41 CD8_TCM L2
ENSG00000173598 NUDT4 598439 sc-eQTL 6.15e-01 0.0387 0.0768 0.41 CD8_TCM L2
ENSG00000177889 UBE2N 534375 sc-eQTL 1.52e-02 0.221 0.09 0.41 CD8_TCM L2
ENSG00000198015 MRPL42 508834 sc-eQTL 9.46e-01 0.00631 0.0937 0.41 CD8_TCM L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 7.25e-01 0.0281 0.0798 0.413 CD8_TEM L2
ENSG00000120833 SOCS2 406508 sc-eQTL 4.92e-01 -0.0585 0.085 0.413 CD8_TEM L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 9.94e-01 -0.000677 0.0896 0.413 CD8_TEM L2
ENSG00000169372 CRADD 298947 sc-eQTL 4.33e-01 0.0745 0.0948 0.413 CD8_TEM L2
ENSG00000173588 CEP83 -483666 sc-eQTL 5.85e-01 0.0506 0.0924 0.413 CD8_TEM L2
ENSG00000173598 NUDT4 598439 sc-eQTL 7.20e-01 -0.0313 0.0874 0.413 CD8_TEM L2
ENSG00000177889 UBE2N 534375 sc-eQTL 2.80e-01 -0.0901 0.0832 0.413 CD8_TEM L2
ENSG00000198015 MRPL42 508834 sc-eQTL 6.58e-01 -0.0383 0.0864 0.413 CD8_TEM L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 3.40e-01 -0.073 0.0763 0.407 MAIT L2
ENSG00000120833 SOCS2 406508 sc-eQTL 4.70e-01 0.0589 0.0813 0.407 MAIT L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 4.98e-02 0.146 0.0742 0.407 MAIT L2
ENSG00000169372 CRADD 298947 sc-eQTL 8.72e-01 0.0154 0.0952 0.407 MAIT L2
ENSG00000173588 CEP83 -483666 sc-eQTL 6.06e-02 0.16 0.085 0.407 MAIT L2
ENSG00000173598 NUDT4 598439 sc-eQTL 7.39e-01 0.023 0.0691 0.407 MAIT L2
ENSG00000177889 UBE2N 534375 sc-eQTL 4.17e-01 0.0689 0.0846 0.407 MAIT L2
ENSG00000198015 MRPL42 508834 sc-eQTL 4.00e-01 0.0729 0.0864 0.407 MAIT L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 9.97e-01 0.000335 0.0922 0.416 NK_CD56bright L2
ENSG00000120833 SOCS2 406508 sc-eQTL 1.76e-01 -0.113 0.0833 0.416 NK_CD56bright L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 2.19e-01 -0.1 0.0812 0.416 NK_CD56bright L2
ENSG00000169372 CRADD 298947 sc-eQTL 6.38e-02 -0.183 0.0983 0.416 NK_CD56bright L2
ENSG00000173588 CEP83 -483666 sc-eQTL 9.12e-01 -0.0091 0.0826 0.416 NK_CD56bright L2
ENSG00000173598 NUDT4 598439 sc-eQTL 2.33e-01 0.105 0.088 0.416 NK_CD56bright L2
ENSG00000177889 UBE2N 534375 sc-eQTL 4.62e-01 -0.069 0.0936 0.416 NK_CD56bright L2
ENSG00000198015 MRPL42 508834 sc-eQTL 2.66e-01 -0.104 0.0931 0.416 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 404554 sc-eQTL 2.70e-01 -0.0959 0.0868 0.416 NK_CD56bright L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 1.94e-01 -0.103 0.079 0.409 NK_CD56dim L2
ENSG00000120833 SOCS2 406508 sc-eQTL 9.89e-01 0.00093 0.0676 0.409 NK_CD56dim L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 9.55e-01 0.00419 0.0736 0.409 NK_CD56dim L2
ENSG00000169372 CRADD 298947 sc-eQTL 2.80e-01 -0.104 0.0956 0.409 NK_CD56dim L2
ENSG00000173588 CEP83 -483666 sc-eQTL 2.57e-02 0.189 0.084 0.409 NK_CD56dim L2
ENSG00000173598 NUDT4 598439 sc-eQTL 3.21e-01 0.0674 0.0678 0.409 NK_CD56dim L2
ENSG00000177889 UBE2N 534375 sc-eQTL 4.60e-01 0.0483 0.0652 0.409 NK_CD56dim L2
ENSG00000198015 MRPL42 508834 sc-eQTL 8.52e-01 -0.0169 0.0904 0.409 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 404554 sc-eQTL 9.46e-01 -0.00627 0.093 0.409 NK_CD56dim L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 3.68e-01 -0.0788 0.0874 0.413 NK_HLA L2
ENSG00000120833 SOCS2 406508 sc-eQTL 1.23e-01 -0.134 0.0863 0.413 NK_HLA L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 9.82e-01 0.00177 0.0793 0.413 NK_HLA L2
ENSG00000169372 CRADD 298947 sc-eQTL 8.51e-01 0.0182 0.0972 0.413 NK_HLA L2
ENSG00000173588 CEP83 -483666 sc-eQTL 6.45e-02 -0.168 0.0903 0.413 NK_HLA L2
ENSG00000173598 NUDT4 598439 sc-eQTL 4.19e-01 0.0657 0.0811 0.413 NK_HLA L2
ENSG00000177889 UBE2N 534375 sc-eQTL 1.77e-01 0.123 0.0906 0.413 NK_HLA L2
ENSG00000198015 MRPL42 508834 sc-eQTL 6.56e-01 0.0453 0.101 0.413 NK_HLA L2
ENSG00000246985 SOCS2-AS1 404554 sc-eQTL 2.41e-01 -0.0961 0.0818 0.413 NK_HLA L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 7.53e-01 0.027 0.0858 0.409 NK_cytokine L2
ENSG00000120833 SOCS2 406508 sc-eQTL 6.99e-01 -0.029 0.075 0.409 NK_cytokine L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 9.03e-01 -0.00932 0.0761 0.409 NK_cytokine L2
ENSG00000169372 CRADD 298947 sc-eQTL 9.82e-01 0.00188 0.0849 0.409 NK_cytokine L2
ENSG00000173588 CEP83 -483666 sc-eQTL 5.65e-02 -0.166 0.0866 0.409 NK_cytokine L2
ENSG00000173598 NUDT4 598439 sc-eQTL 2.28e-01 0.0805 0.0666 0.409 NK_cytokine L2
ENSG00000177889 UBE2N 534375 sc-eQTL 5.59e-01 0.0449 0.0768 0.409 NK_cytokine L2
ENSG00000198015 MRPL42 508834 sc-eQTL 4.06e-01 -0.074 0.0889 0.409 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 404554 sc-eQTL 7.06e-01 -0.0337 0.089 0.409 NK_cytokine L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 1.00e+00 -5.5e-05 0.102 0.37 PB L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 8.86e-01 -0.015 0.104 0.37 PB L2
ENSG00000169372 CRADD 298947 sc-eQTL 5.92e-01 -0.0516 0.096 0.37 PB L2
ENSG00000173588 CEP83 -483666 sc-eQTL 1.28e-01 -0.165 0.107 0.37 PB L2
ENSG00000173598 NUDT4 598439 sc-eQTL 3.96e-01 0.0763 0.0896 0.37 PB L2
ENSG00000177889 UBE2N 534375 sc-eQTL 9.78e-01 0.00216 0.0791 0.37 PB L2
ENSG00000198015 MRPL42 508834 sc-eQTL 4.38e-01 0.0843 0.108 0.37 PB L2
ENSG00000257345 LINC02413 977104 sc-eQTL 5.49e-01 -0.0632 0.105 0.37 PB L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 6.74e-01 0.033 0.0782 0.409 Pro_T L2
ENSG00000120833 SOCS2 406508 sc-eQTL 8.27e-01 0.0183 0.0836 0.409 Pro_T L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 9.21e-01 -0.0088 0.0889 0.409 Pro_T L2
ENSG00000169372 CRADD 298947 sc-eQTL 2.94e-01 0.0912 0.0866 0.409 Pro_T L2
ENSG00000173588 CEP83 -483666 sc-eQTL 8.87e-01 -0.0125 0.0881 0.409 Pro_T L2
ENSG00000173598 NUDT4 598439 sc-eQTL 3.18e-01 -0.0703 0.0703 0.409 Pro_T L2
ENSG00000177889 UBE2N 534375 sc-eQTL 3.92e-01 0.0556 0.0648 0.409 Pro_T L2
ENSG00000198015 MRPL42 508834 sc-eQTL 8.15e-01 0.0182 0.078 0.409 Pro_T L2
ENSG00000120833 SOCS2 406508 sc-eQTL 7.39e-01 0.026 0.078 0.406 Treg L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 6.89e-01 0.033 0.0822 0.406 Treg L2
ENSG00000169372 CRADD 298947 sc-eQTL 9.59e-01 0.00494 0.095 0.406 Treg L2
ENSG00000173588 CEP83 -483666 sc-eQTL 5.91e-01 0.0473 0.088 0.406 Treg L2
ENSG00000173598 NUDT4 598439 sc-eQTL 3.23e-01 0.0666 0.0671 0.406 Treg L2
ENSG00000177889 UBE2N 534375 sc-eQTL 1.44e-01 -0.106 0.0722 0.406 Treg L2
ENSG00000198015 MRPL42 508834 sc-eQTL 7.00e-01 -0.0353 0.0913 0.406 Treg L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 2.66e-01 -0.111 0.0991 0.417 cDC L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 4.50e-01 0.0656 0.0867 0.417 cDC L2
ENSG00000169372 CRADD 298947 sc-eQTL 7.14e-01 -0.0352 0.096 0.417 cDC L2
ENSG00000173588 CEP83 -483666 sc-eQTL 1.10e-01 -0.13 0.0809 0.417 cDC L2
ENSG00000173598 NUDT4 598439 sc-eQTL 4.98e-01 -0.0662 0.0975 0.417 cDC L2
ENSG00000177889 UBE2N 534375 sc-eQTL 8.84e-01 0.0124 0.0849 0.417 cDC L2
ENSG00000198015 MRPL42 508834 sc-eQTL 9.83e-01 -0.00209 0.0973 0.417 cDC L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 2.91e-01 -0.0735 0.0695 0.406 cMono_IL1B L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 6.75e-01 0.0258 0.0615 0.406 cMono_IL1B L2
ENSG00000169372 CRADD 298947 sc-eQTL 8.82e-01 -0.0136 0.0914 0.406 cMono_IL1B L2
ENSG00000173588 CEP83 -483666 sc-eQTL 7.34e-01 0.0284 0.0837 0.406 cMono_IL1B L2
ENSG00000173598 NUDT4 598439 sc-eQTL 8.71e-01 0.0108 0.0669 0.406 cMono_IL1B L2
ENSG00000177889 UBE2N 534375 sc-eQTL 7.62e-01 -0.0159 0.0524 0.406 cMono_IL1B L2
ENSG00000198015 MRPL42 508834 sc-eQTL 6.88e-01 -0.0292 0.0727 0.406 cMono_IL1B L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 8.97e-01 -0.0102 0.0788 0.406 cMono_S100A L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 5.97e-01 -0.034 0.0642 0.406 cMono_S100A L2
ENSG00000169372 CRADD 298947 sc-eQTL 7.10e-01 0.0366 0.0983 0.406 cMono_S100A L2
ENSG00000173588 CEP83 -483666 sc-eQTL 6.17e-01 -0.0454 0.0908 0.406 cMono_S100A L2
ENSG00000173598 NUDT4 598439 sc-eQTL 3.88e-01 0.0667 0.0772 0.406 cMono_S100A L2
ENSG00000177889 UBE2N 534375 sc-eQTL 3.67e-01 0.0607 0.0671 0.406 cMono_S100A L2
ENSG00000198015 MRPL42 508834 sc-eQTL 6.04e-01 -0.0401 0.0771 0.406 cMono_S100A L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 1.72e-02 0.203 0.0841 0.409 gdT L2
ENSG00000120833 SOCS2 406508 sc-eQTL 6.33e-01 -0.0494 0.103 0.409 gdT L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 1.19e-01 -0.168 0.107 0.409 gdT L2
ENSG00000169372 CRADD 298947 sc-eQTL 8.87e-02 0.18 0.105 0.409 gdT L2
ENSG00000173588 CEP83 -483666 sc-eQTL 7.98e-01 -0.027 0.106 0.409 gdT L2
ENSG00000173598 NUDT4 598439 sc-eQTL 1.11e-02 -0.254 0.0985 0.409 gdT L2
ENSG00000177889 UBE2N 534375 sc-eQTL 9.17e-01 0.0115 0.11 0.409 gdT L2
ENSG00000198015 MRPL42 508834 sc-eQTL 3.49e-01 -0.101 0.107 0.409 gdT L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 6.07e-01 0.0488 0.0948 0.404 intMono L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 3.18e-01 -0.0799 0.0798 0.404 intMono L2
ENSG00000169372 CRADD 298947 sc-eQTL 4.37e-01 -0.0718 0.092 0.404 intMono L2
ENSG00000173588 CEP83 -483666 sc-eQTL 8.77e-01 0.0149 0.0964 0.404 intMono L2
ENSG00000173598 NUDT4 598439 sc-eQTL 8.09e-01 0.0204 0.0839 0.404 intMono L2
ENSG00000177889 UBE2N 534375 sc-eQTL 9.69e-01 0.00313 0.0799 0.404 intMono L2
ENSG00000198015 MRPL42 508834 sc-eQTL 3.34e-01 -0.0832 0.0859 0.404 intMono L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 1.48e-01 -0.124 0.0853 0.41 ncMono L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 9.32e-01 -0.00501 0.0591 0.41 ncMono L2
ENSG00000169372 CRADD 298947 sc-eQTL 2.69e-01 -0.102 0.0917 0.41 ncMono L2
ENSG00000173588 CEP83 -483666 sc-eQTL 3.33e-01 0.0894 0.0921 0.41 ncMono L2
ENSG00000173598 NUDT4 598439 sc-eQTL 6.53e-01 -0.0364 0.0808 0.41 ncMono L2
ENSG00000177889 UBE2N 534375 sc-eQTL 2.22e-01 -0.0961 0.0785 0.41 ncMono L2
ENSG00000198015 MRPL42 508834 sc-eQTL 1.38e-01 -0.121 0.0812 0.41 ncMono L2
ENSG00000057704 TMCC3 -674235 sc-eQTL 3.61e-01 0.0921 0.101 0.421 pDC L2
ENSG00000136040 PLXNC1 -172255 sc-eQTL 2.06e-01 0.127 0.0998 0.421 pDC L2
ENSG00000169372 CRADD 298947 sc-eQTL 3.01e-01 -0.105 0.101 0.421 pDC L2
ENSG00000173588 CEP83 -483666 sc-eQTL 7.84e-01 -0.0296 0.108 0.421 pDC L2
ENSG00000173598 NUDT4 598439 sc-eQTL 4.91e-01 -0.0602 0.0872 0.421 pDC L2
ENSG00000177889 UBE2N 534375 sc-eQTL 6.30e-01 0.0499 0.103 0.421 pDC L2
ENSG00000198015 MRPL42 508834 sc-eQTL 5.69e-01 0.061 0.107 0.421 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -674235 sc-eQTL 9.23e-01 0.00889 0.092 0.406 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -172255 sc-eQTL 9.52e-01 0.00335 0.0557 0.406 B_Memory LOneK1K
ENSG00000169372 CRADD 298947 sc-eQTL 2.50e-01 -0.109 0.0945 0.406 B_Memory LOneK1K
ENSG00000173588 CEP83 -483666 sc-eQTL 7.10e-01 0.0289 0.0777 0.406 B_Memory LOneK1K
ENSG00000173598 NUDT4 598439 sc-eQTL 4.89e-01 0.0388 0.0559 0.406 B_Memory LOneK1K
ENSG00000177889 UBE2N 534375 sc-eQTL 8.31e-03 0.134 0.0502 0.406 B_Memory LOneK1K
ENSG00000198015 MRPL42 508834 sc-eQTL 1.10e-01 -0.133 0.0827 0.406 B_Memory LOneK1K
ENSG00000257345 LINC02413 977104 sc-eQTL 9.82e-01 -0.00194 0.0867 0.406 B_Memory LOneK1K
ENSG00000057704 TMCC3 -674235 sc-eQTL 6.20e-01 -0.0413 0.0832 0.406 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -172255 sc-eQTL 1.70e-01 -0.0925 0.0672 0.406 B_Naive LOneK1K
ENSG00000169372 CRADD 298947 sc-eQTL 2.78e-01 -0.0972 0.0893 0.406 B_Naive LOneK1K
ENSG00000173588 CEP83 -483666 sc-eQTL 1.86e-01 -0.093 0.0701 0.406 B_Naive LOneK1K
ENSG00000173598 NUDT4 598439 sc-eQTL 7.95e-01 -0.017 0.0653 0.406 B_Naive LOneK1K
ENSG00000177889 UBE2N 534375 sc-eQTL 6.32e-01 0.0321 0.067 0.406 B_Naive LOneK1K
ENSG00000198015 MRPL42 508834 sc-eQTL 1.09e-01 -0.132 0.082 0.406 B_Naive LOneK1K
ENSG00000257345 LINC02413 977104 sc-eQTL 3.27e-01 0.0832 0.0846 0.406 B_Naive LOneK1K
ENSG00000057704 TMCC3 -674235 sc-eQTL 4.99e-01 -0.0435 0.0641 0.406 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -172255 sc-eQTL 9.88e-01 -0.000882 0.0569 0.406 CD14_Mono LOneK1K
ENSG00000169372 CRADD 298947 sc-eQTL 9.17e-01 0.00961 0.0918 0.406 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -483666 sc-eQTL 8.15e-01 -0.0182 0.0775 0.406 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 598439 sc-eQTL 2.56e-01 0.0745 0.0655 0.406 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 534375 sc-eQTL 3.60e-01 0.0453 0.0494 0.406 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 508834 sc-eQTL 3.87e-01 -0.0593 0.0685 0.406 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 -674235 sc-eQTL 6.39e-01 -0.0403 0.0858 0.405 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -172255 sc-eQTL 4.37e-01 -0.0426 0.0547 0.405 CD16_Mono LOneK1K
ENSG00000169372 CRADD 298947 sc-eQTL 1.59e-01 -0.139 0.0986 0.405 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -483666 sc-eQTL 7.44e-01 0.0298 0.091 0.405 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 598439 sc-eQTL 6.40e-01 -0.0347 0.074 0.405 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 534375 sc-eQTL 3.08e-01 -0.0756 0.074 0.405 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 508834 sc-eQTL 7.96e-02 -0.137 0.0776 0.405 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 -674235 sc-eQTL 2.19e-01 -0.0957 0.0776 0.409 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 406508 sc-eQTL 3.13e-01 -0.0611 0.0604 0.409 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -172255 sc-eQTL 5.37e-01 0.0409 0.0662 0.409 NK_CD56dim LOneK1K
ENSG00000169372 CRADD 298947 sc-eQTL 5.28e-01 -0.059 0.0935 0.409 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -483666 sc-eQTL 5.43e-01 0.0453 0.0744 0.409 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 598439 sc-eQTL 8.55e-02 0.102 0.059 0.409 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 534375 sc-eQTL 2.30e-01 0.0689 0.0572 0.409 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 508834 sc-eQTL 6.25e-01 -0.0419 0.0857 0.409 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 404554 sc-eQTL 5.57e-01 -0.0554 0.0941 0.409 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000169372 \N 298947 1.87e-06 9.74e-07 3.29e-07 1.32e-06 3.17e-07 7.98e-07 1.54e-06 2.07e-07 1.32e-06 5.06e-07 1.56e-06 6.57e-07 2.34e-06 2.81e-07 4.91e-07 8.79e-07 9.33e-07 5.99e-07 8.35e-07 6.91e-07 7.54e-07 1.72e-06 8.66e-07 6.54e-07 2.43e-06 3.63e-07 9.54e-07 7.22e-07 1.29e-06 1.31e-06 5.66e-07 5.02e-08 1.94e-07 5.48e-07 5.17e-07 3.38e-07 4.75e-07 1.61e-07 3.25e-07 2.44e-07 2.71e-07 1.58e-06 3.48e-07 1.89e-07 1.85e-07 1.48e-07 2.1e-07 8.37e-08 6.51e-08