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Genes within 1Mb (chr12:93961041:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -689516 sc-eQTL 2.30e-01 -0.189 0.157 0.929 B L1
ENSG00000136040 PLXNC1 -187536 sc-eQTL 5.21e-01 0.0573 0.0891 0.929 B L1
ENSG00000169372 CRADD 283666 sc-eQTL 1.94e-01 0.175 0.134 0.929 B L1
ENSG00000173588 CEP83 -498947 sc-eQTL 1.03e-01 -0.183 0.112 0.929 B L1
ENSG00000173598 NUDT4 583158 sc-eQTL 9.98e-01 0.000306 0.1 0.929 B L1
ENSG00000177889 UBE2N 519094 sc-eQTL 8.90e-01 0.0123 0.0886 0.929 B L1
ENSG00000198015 MRPL42 493553 sc-eQTL 6.25e-03 -0.375 0.136 0.929 B L1
ENSG00000257345 LINC02413 961823 sc-eQTL 3.37e-01 0.132 0.137 0.929 B L1
ENSG00000120833 SOCS2 391227 sc-eQTL 4.82e-01 0.0638 0.0907 0.929 CD4T L1
ENSG00000136040 PLXNC1 -187536 sc-eQTL 4.48e-01 0.0723 0.0952 0.929 CD4T L1
ENSG00000169372 CRADD 283666 sc-eQTL 5.77e-02 0.296 0.155 0.929 CD4T L1
ENSG00000173588 CEP83 -498947 sc-eQTL 9.03e-01 -0.0121 0.0999 0.929 CD4T L1
ENSG00000173598 NUDT4 583158 sc-eQTL 1.85e-01 -0.119 0.0898 0.929 CD4T L1
ENSG00000177889 UBE2N 519094 sc-eQTL 8.24e-01 0.0187 0.0837 0.929 CD4T L1
ENSG00000198015 MRPL42 493553 sc-eQTL 4.60e-01 -0.108 0.145 0.929 CD4T L1
ENSG00000057704 TMCC3 -689516 sc-eQTL 7.57e-01 -0.028 0.0901 0.929 CD8T L1
ENSG00000120833 SOCS2 391227 sc-eQTL 7.03e-01 -0.0461 0.121 0.929 CD8T L1
ENSG00000136040 PLXNC1 -187536 sc-eQTL 3.22e-01 -0.123 0.124 0.929 CD8T L1
ENSG00000169372 CRADD 283666 sc-eQTL 5.59e-01 -0.0854 0.146 0.929 CD8T L1
ENSG00000173588 CEP83 -498947 sc-eQTL 7.76e-01 -0.0331 0.116 0.929 CD8T L1
ENSG00000173598 NUDT4 583158 sc-eQTL 6.82e-01 -0.0355 0.0866 0.929 CD8T L1
ENSG00000177889 UBE2N 519094 sc-eQTL 7.97e-01 -0.0278 0.108 0.929 CD8T L1
ENSG00000198015 MRPL42 493553 sc-eQTL 4.13e-02 -0.313 0.152 0.929 CD8T L1
ENSG00000057704 TMCC3 -689516 sc-eQTL 7.12e-01 0.0619 0.168 0.928 DC L1
ENSG00000136040 PLXNC1 -187536 sc-eQTL 3.53e-01 0.139 0.15 0.928 DC L1
ENSG00000169372 CRADD 283666 sc-eQTL 7.14e-01 0.0622 0.169 0.928 DC L1
ENSG00000173588 CEP83 -498947 sc-eQTL 4.77e-01 -0.0952 0.133 0.928 DC L1
ENSG00000173598 NUDT4 583158 sc-eQTL 9.13e-01 0.0153 0.139 0.928 DC L1
ENSG00000177889 UBE2N 519094 sc-eQTL 8.61e-01 0.0247 0.141 0.928 DC L1
ENSG00000198015 MRPL42 493553 sc-eQTL 6.40e-01 0.0757 0.161 0.928 DC L1
ENSG00000057704 TMCC3 -689516 sc-eQTL 5.55e-01 0.0676 0.114 0.929 Mono L1
ENSG00000136040 PLXNC1 -187536 sc-eQTL 4.66e-01 -0.0692 0.0947 0.929 Mono L1
ENSG00000169372 CRADD 283666 sc-eQTL 5.21e-01 0.112 0.174 0.929 Mono L1
ENSG00000173588 CEP83 -498947 sc-eQTL 2.94e-01 -0.147 0.14 0.929 Mono L1
ENSG00000173598 NUDT4 583158 sc-eQTL 1.89e-01 -0.158 0.12 0.929 Mono L1
ENSG00000177889 UBE2N 519094 sc-eQTL 4.69e-01 0.0654 0.0902 0.929 Mono L1
ENSG00000198015 MRPL42 493553 sc-eQTL 6.26e-01 0.0594 0.122 0.929 Mono L1
ENSG00000057704 TMCC3 -689516 sc-eQTL 1.11e-01 -0.225 0.14 0.929 NK L1
ENSG00000120833 SOCS2 391227 sc-eQTL 2.87e-01 0.118 0.11 0.929 NK L1
ENSG00000136040 PLXNC1 -187536 sc-eQTL 1.38e-01 -0.171 0.115 0.929 NK L1
ENSG00000169372 CRADD 283666 sc-eQTL 6.38e-02 -0.307 0.165 0.929 NK L1
ENSG00000173588 CEP83 -498947 sc-eQTL 1.45e-01 -0.192 0.131 0.929 NK L1
ENSG00000173598 NUDT4 583158 sc-eQTL 4.18e-01 -0.087 0.107 0.929 NK L1
ENSG00000177889 UBE2N 519094 sc-eQTL 5.81e-01 0.0588 0.106 0.929 NK L1
ENSG00000198015 MRPL42 493553 sc-eQTL 5.93e-01 -0.0812 0.152 0.929 NK L1
ENSG00000246985 SOCS2-AS1 389273 sc-eQTL 5.16e-01 -0.112 0.173 0.929 NK L1
ENSG00000057704 TMCC3 -689516 sc-eQTL 1.04e-01 -0.234 0.143 0.929 Other_T L1
ENSG00000120833 SOCS2 391227 sc-eQTL 4.32e-01 0.112 0.142 0.929 Other_T L1
ENSG00000136040 PLXNC1 -187536 sc-eQTL 7.15e-01 -0.0488 0.133 0.929 Other_T L1
ENSG00000169372 CRADD 283666 sc-eQTL 6.76e-02 -0.294 0.16 0.929 Other_T L1
ENSG00000173588 CEP83 -498947 sc-eQTL 8.56e-01 0.0274 0.15 0.929 Other_T L1
ENSG00000173598 NUDT4 583158 sc-eQTL 1.54e-01 -0.164 0.115 0.929 Other_T L1
ENSG00000177889 UBE2N 519094 sc-eQTL 2.91e-01 0.113 0.107 0.929 Other_T L1
ENSG00000198015 MRPL42 493553 sc-eQTL 1.78e-01 -0.17 0.126 0.929 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -689516 sc-eQTL 6.24e-01 -0.0851 0.173 0.941 B_Activated L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 5.09e-01 -0.108 0.164 0.941 B_Activated L2
ENSG00000169372 CRADD 283666 sc-eQTL 2.84e-01 0.206 0.192 0.941 B_Activated L2
ENSG00000173588 CEP83 -498947 sc-eQTL 2.40e-01 0.24 0.203 0.941 B_Activated L2
ENSG00000173598 NUDT4 583158 sc-eQTL 8.22e-01 0.0385 0.171 0.941 B_Activated L2
ENSG00000177889 UBE2N 519094 sc-eQTL 5.95e-01 -0.113 0.212 0.941 B_Activated L2
ENSG00000198015 MRPL42 493553 sc-eQTL 9.78e-01 -0.00566 0.206 0.941 B_Activated L2
ENSG00000257345 LINC02413 961823 sc-eQTL 8.12e-01 0.0475 0.2 0.941 B_Activated L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 7.36e-01 -0.0546 0.162 0.929 B_Intermediate L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 7.46e-01 -0.0441 0.136 0.929 B_Intermediate L2
ENSG00000169372 CRADD 283666 sc-eQTL 4.48e-01 0.123 0.162 0.929 B_Intermediate L2
ENSG00000173588 CEP83 -498947 sc-eQTL 1.59e-01 -0.213 0.15 0.929 B_Intermediate L2
ENSG00000173598 NUDT4 583158 sc-eQTL 7.32e-01 -0.0462 0.135 0.929 B_Intermediate L2
ENSG00000177889 UBE2N 519094 sc-eQTL 3.59e-01 0.126 0.137 0.929 B_Intermediate L2
ENSG00000198015 MRPL42 493553 sc-eQTL 6.71e-01 -0.0713 0.167 0.929 B_Intermediate L2
ENSG00000257345 LINC02413 961823 sc-eQTL 4.23e-01 0.132 0.165 0.929 B_Intermediate L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 1.00e-01 0.279 0.169 0.929 B_Memory L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 7.28e-01 0.0458 0.132 0.929 B_Memory L2
ENSG00000169372 CRADD 283666 sc-eQTL 9.91e-01 -0.00186 0.172 0.929 B_Memory L2
ENSG00000173588 CEP83 -498947 sc-eQTL 5.48e-01 -0.0924 0.154 0.929 B_Memory L2
ENSG00000173598 NUDT4 583158 sc-eQTL 3.34e-01 0.119 0.123 0.929 B_Memory L2
ENSG00000177889 UBE2N 519094 sc-eQTL 8.36e-01 0.0229 0.11 0.929 B_Memory L2
ENSG00000198015 MRPL42 493553 sc-eQTL 4.37e-02 -0.33 0.163 0.929 B_Memory L2
ENSG00000257345 LINC02413 961823 sc-eQTL 9.92e-01 0.00174 0.164 0.929 B_Memory L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 1.15e-01 -0.252 0.159 0.929 B_Naive1 L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 9.85e-01 0.00261 0.136 0.929 B_Naive1 L2
ENSG00000169372 CRADD 283666 sc-eQTL 3.87e-01 0.147 0.17 0.929 B_Naive1 L2
ENSG00000173588 CEP83 -498947 sc-eQTL 5.85e-01 -0.0766 0.14 0.929 B_Naive1 L2
ENSG00000173598 NUDT4 583158 sc-eQTL 1.88e-01 -0.16 0.121 0.929 B_Naive1 L2
ENSG00000177889 UBE2N 519094 sc-eQTL 9.20e-01 0.0132 0.131 0.929 B_Naive1 L2
ENSG00000198015 MRPL42 493553 sc-eQTL 1.22e-02 -0.377 0.149 0.929 B_Naive1 L2
ENSG00000257345 LINC02413 961823 sc-eQTL 1.17e-01 0.251 0.16 0.929 B_Naive1 L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 7.25e-01 -0.0558 0.159 0.929 B_Naive2 L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 9.94e-01 0.00119 0.148 0.929 B_Naive2 L2
ENSG00000169372 CRADD 283666 sc-eQTL 8.58e-01 0.0299 0.167 0.929 B_Naive2 L2
ENSG00000173588 CEP83 -498947 sc-eQTL 9.42e-02 -0.262 0.156 0.929 B_Naive2 L2
ENSG00000173598 NUDT4 583158 sc-eQTL 5.15e-01 0.0901 0.138 0.929 B_Naive2 L2
ENSG00000177889 UBE2N 519094 sc-eQTL 9.25e-01 0.0128 0.135 0.929 B_Naive2 L2
ENSG00000198015 MRPL42 493553 sc-eQTL 7.67e-02 -0.309 0.174 0.929 B_Naive2 L2
ENSG00000257345 LINC02413 961823 sc-eQTL 3.04e-01 -0.173 0.168 0.929 B_Naive2 L2
ENSG00000120833 SOCS2 391227 sc-eQTL 6.38e-01 0.078 0.166 0.927 CD4_CTL L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 2.16e-01 -0.195 0.158 0.927 CD4_CTL L2
ENSG00000169372 CRADD 283666 sc-eQTL 1.52e-02 -0.387 0.158 0.927 CD4_CTL L2
ENSG00000173588 CEP83 -498947 sc-eQTL 8.13e-01 -0.0383 0.162 0.927 CD4_CTL L2
ENSG00000173598 NUDT4 583158 sc-eQTL 8.53e-01 -0.0292 0.157 0.927 CD4_CTL L2
ENSG00000177889 UBE2N 519094 sc-eQTL 7.15e-01 0.0587 0.16 0.927 CD4_CTL L2
ENSG00000198015 MRPL42 493553 sc-eQTL 3.49e-01 -0.168 0.179 0.927 CD4_CTL L2
ENSG00000120833 SOCS2 391227 sc-eQTL 4.97e-01 0.0635 0.0934 0.929 CD4_Naive L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 3.38e-01 0.101 0.105 0.929 CD4_Naive L2
ENSG00000169372 CRADD 283666 sc-eQTL 1.47e-02 0.391 0.159 0.929 CD4_Naive L2
ENSG00000173588 CEP83 -498947 sc-eQTL 5.66e-01 0.0657 0.114 0.929 CD4_Naive L2
ENSG00000173598 NUDT4 583158 sc-eQTL 2.83e-01 -0.102 0.0946 0.929 CD4_Naive L2
ENSG00000177889 UBE2N 519094 sc-eQTL 7.80e-01 0.0255 0.091 0.929 CD4_Naive L2
ENSG00000198015 MRPL42 493553 sc-eQTL 7.32e-01 -0.0525 0.153 0.929 CD4_Naive L2
ENSG00000120833 SOCS2 391227 sc-eQTL 2.87e-01 0.114 0.107 0.929 CD4_TCM L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 3.24e-01 0.125 0.127 0.929 CD4_TCM L2
ENSG00000169372 CRADD 283666 sc-eQTL 7.14e-01 0.0629 0.171 0.929 CD4_TCM L2
ENSG00000173588 CEP83 -498947 sc-eQTL 5.14e-01 -0.0884 0.135 0.929 CD4_TCM L2
ENSG00000173598 NUDT4 583158 sc-eQTL 2.38e-01 -0.127 0.107 0.929 CD4_TCM L2
ENSG00000177889 UBE2N 519094 sc-eQTL 7.03e-01 -0.0395 0.103 0.929 CD4_TCM L2
ENSG00000198015 MRPL42 493553 sc-eQTL 6.86e-01 -0.0638 0.158 0.929 CD4_TCM L2
ENSG00000120833 SOCS2 391227 sc-eQTL 9.58e-01 -0.0061 0.116 0.929 CD4_TEM L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 8.75e-01 0.0219 0.139 0.929 CD4_TEM L2
ENSG00000169372 CRADD 283666 sc-eQTL 3.30e-01 0.167 0.171 0.929 CD4_TEM L2
ENSG00000173588 CEP83 -498947 sc-eQTL 8.03e-01 0.0391 0.156 0.929 CD4_TEM L2
ENSG00000173598 NUDT4 583158 sc-eQTL 7.60e-02 -0.239 0.134 0.929 CD4_TEM L2
ENSG00000177889 UBE2N 519094 sc-eQTL 4.42e-01 -0.107 0.139 0.929 CD4_TEM L2
ENSG00000198015 MRPL42 493553 sc-eQTL 9.32e-01 -0.013 0.153 0.929 CD4_TEM L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 5.67e-01 -0.0793 0.138 0.929 CD8_CTL L2
ENSG00000120833 SOCS2 391227 sc-eQTL 4.54e-02 -0.279 0.139 0.929 CD8_CTL L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 8.21e-01 -0.0321 0.142 0.929 CD8_CTL L2
ENSG00000169372 CRADD 283666 sc-eQTL 8.93e-01 -0.0232 0.172 0.929 CD8_CTL L2
ENSG00000173588 CEP83 -498947 sc-eQTL 5.25e-01 -0.0994 0.156 0.929 CD8_CTL L2
ENSG00000173598 NUDT4 583158 sc-eQTL 4.32e-01 -0.1 0.128 0.929 CD8_CTL L2
ENSG00000177889 UBE2N 519094 sc-eQTL 3.29e-01 0.145 0.148 0.929 CD8_CTL L2
ENSG00000198015 MRPL42 493553 sc-eQTL 1.14e-01 -0.268 0.169 0.929 CD8_CTL L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 9.04e-01 -0.0148 0.122 0.929 CD8_Naive L2
ENSG00000120833 SOCS2 391227 sc-eQTL 1.38e-01 0.189 0.127 0.929 CD8_Naive L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 3.26e-01 -0.14 0.143 0.929 CD8_Naive L2
ENSG00000169372 CRADD 283666 sc-eQTL 8.03e-01 0.0415 0.166 0.929 CD8_Naive L2
ENSG00000173588 CEP83 -498947 sc-eQTL 9.68e-01 0.0055 0.138 0.929 CD8_Naive L2
ENSG00000173598 NUDT4 583158 sc-eQTL 9.01e-01 0.0142 0.115 0.929 CD8_Naive L2
ENSG00000177889 UBE2N 519094 sc-eQTL 3.91e-01 -0.107 0.125 0.929 CD8_Naive L2
ENSG00000198015 MRPL42 493553 sc-eQTL 6.59e-02 -0.293 0.158 0.929 CD8_Naive L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 4.41e-01 -0.101 0.131 0.931 CD8_TCM L2
ENSG00000120833 SOCS2 391227 sc-eQTL 8.93e-02 -0.248 0.145 0.931 CD8_TCM L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 3.97e-01 -0.14 0.164 0.931 CD8_TCM L2
ENSG00000169372 CRADD 283666 sc-eQTL 1.41e-01 -0.256 0.173 0.931 CD8_TCM L2
ENSG00000173588 CEP83 -498947 sc-eQTL 1.96e-01 -0.219 0.168 0.931 CD8_TCM L2
ENSG00000173598 NUDT4 583158 sc-eQTL 8.35e-01 -0.0288 0.138 0.931 CD8_TCM L2
ENSG00000177889 UBE2N 519094 sc-eQTL 3.67e-01 -0.148 0.164 0.931 CD8_TCM L2
ENSG00000198015 MRPL42 493553 sc-eQTL 8.25e-01 0.0373 0.169 0.931 CD8_TCM L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 6.52e-01 -0.0668 0.148 0.927 CD8_TEM L2
ENSG00000120833 SOCS2 391227 sc-eQTL 5.56e-01 0.0931 0.158 0.927 CD8_TEM L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 9.14e-01 0.0179 0.166 0.927 CD8_TEM L2
ENSG00000169372 CRADD 283666 sc-eQTL 1.49e-01 -0.254 0.175 0.927 CD8_TEM L2
ENSG00000173588 CEP83 -498947 sc-eQTL 8.78e-01 -0.0264 0.171 0.927 CD8_TEM L2
ENSG00000173598 NUDT4 583158 sc-eQTL 6.70e-01 -0.0692 0.162 0.927 CD8_TEM L2
ENSG00000177889 UBE2N 519094 sc-eQTL 8.74e-01 -0.0245 0.155 0.927 CD8_TEM L2
ENSG00000198015 MRPL42 493553 sc-eQTL 9.59e-01 0.0082 0.16 0.927 CD8_TEM L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 4.38e-01 0.109 0.14 0.929 MAIT L2
ENSG00000120833 SOCS2 391227 sc-eQTL 1.40e-01 0.221 0.149 0.929 MAIT L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 5.61e-01 0.0802 0.138 0.929 MAIT L2
ENSG00000169372 CRADD 283666 sc-eQTL 7.04e-01 -0.0666 0.175 0.929 MAIT L2
ENSG00000173588 CEP83 -498947 sc-eQTL 4.83e-01 0.111 0.158 0.929 MAIT L2
ENSG00000173598 NUDT4 583158 sc-eQTL 7.07e-01 -0.0478 0.127 0.929 MAIT L2
ENSG00000177889 UBE2N 519094 sc-eQTL 6.77e-01 -0.065 0.156 0.929 MAIT L2
ENSG00000198015 MRPL42 493553 sc-eQTL 7.48e-01 -0.0513 0.159 0.929 MAIT L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 3.93e-01 -0.145 0.17 0.931 NK_CD56bright L2
ENSG00000120833 SOCS2 391227 sc-eQTL 1.81e-01 0.206 0.154 0.931 NK_CD56bright L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 9.38e-01 0.0116 0.15 0.931 NK_CD56bright L2
ENSG00000169372 CRADD 283666 sc-eQTL 4.65e-01 -0.134 0.182 0.931 NK_CD56bright L2
ENSG00000173588 CEP83 -498947 sc-eQTL 5.83e-01 -0.0836 0.152 0.931 NK_CD56bright L2
ENSG00000173598 NUDT4 583158 sc-eQTL 5.76e-02 0.308 0.161 0.931 NK_CD56bright L2
ENSG00000177889 UBE2N 519094 sc-eQTL 2.76e-01 -0.188 0.172 0.931 NK_CD56bright L2
ENSG00000198015 MRPL42 493553 sc-eQTL 8.51e-01 -0.0323 0.172 0.931 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 389273 sc-eQTL 6.30e-01 -0.0773 0.16 0.931 NK_CD56bright L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 4.51e-02 -0.292 0.145 0.929 NK_CD56dim L2
ENSG00000120833 SOCS2 391227 sc-eQTL 9.86e-01 -0.00212 0.125 0.929 NK_CD56dim L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 5.45e-01 -0.0823 0.136 0.929 NK_CD56dim L2
ENSG00000169372 CRADD 283666 sc-eQTL 1.70e-01 -0.242 0.176 0.929 NK_CD56dim L2
ENSG00000173588 CEP83 -498947 sc-eQTL 7.36e-01 -0.0531 0.157 0.929 NK_CD56dim L2
ENSG00000173598 NUDT4 583158 sc-eQTL 4.92e-01 -0.0863 0.125 0.929 NK_CD56dim L2
ENSG00000177889 UBE2N 519094 sc-eQTL 3.00e-01 0.125 0.12 0.929 NK_CD56dim L2
ENSG00000198015 MRPL42 493553 sc-eQTL 7.41e-01 0.0553 0.167 0.929 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 389273 sc-eQTL 4.66e-02 -0.34 0.17 0.929 NK_CD56dim L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 1.85e-01 -0.219 0.165 0.929 NK_HLA L2
ENSG00000120833 SOCS2 391227 sc-eQTL 6.19e-01 -0.0817 0.164 0.929 NK_HLA L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 2.21e-01 -0.184 0.149 0.929 NK_HLA L2
ENSG00000169372 CRADD 283666 sc-eQTL 6.42e-01 -0.0856 0.184 0.929 NK_HLA L2
ENSG00000173588 CEP83 -498947 sc-eQTL 8.55e-01 -0.0315 0.172 0.929 NK_HLA L2
ENSG00000173598 NUDT4 583158 sc-eQTL 3.92e-01 -0.132 0.153 0.929 NK_HLA L2
ENSG00000177889 UBE2N 519094 sc-eQTL 2.31e-01 0.206 0.172 0.929 NK_HLA L2
ENSG00000198015 MRPL42 493553 sc-eQTL 4.23e-01 -0.154 0.192 0.929 NK_HLA L2
ENSG00000246985 SOCS2-AS1 389273 sc-eQTL 9.13e-01 -0.017 0.155 0.929 NK_HLA L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 6.53e-01 0.0705 0.157 0.929 NK_cytokine L2
ENSG00000120833 SOCS2 391227 sc-eQTL 5.83e-02 0.259 0.136 0.929 NK_cytokine L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 9.71e-01 -0.00507 0.139 0.929 NK_cytokine L2
ENSG00000169372 CRADD 283666 sc-eQTL 2.96e-01 -0.162 0.155 0.929 NK_cytokine L2
ENSG00000173588 CEP83 -498947 sc-eQTL 2.09e-01 -0.201 0.159 0.929 NK_cytokine L2
ENSG00000173598 NUDT4 583158 sc-eQTL 2.88e-01 -0.13 0.122 0.929 NK_cytokine L2
ENSG00000177889 UBE2N 519094 sc-eQTL 4.13e-01 -0.115 0.14 0.929 NK_cytokine L2
ENSG00000198015 MRPL42 493553 sc-eQTL 1.98e-01 -0.209 0.162 0.929 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 389273 sc-eQTL 2.28e-01 0.196 0.162 0.929 NK_cytokine L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 6.97e-01 -0.0821 0.21 0.941 PB L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 6.33e-03 0.58 0.208 0.941 PB L2
ENSG00000169372 CRADD 283666 sc-eQTL 3.91e-02 -0.407 0.195 0.941 PB L2
ENSG00000173588 CEP83 -498947 sc-eQTL 9.19e-01 -0.0227 0.224 0.941 PB L2
ENSG00000173598 NUDT4 583158 sc-eQTL 9.78e-01 0.00504 0.186 0.941 PB L2
ENSG00000177889 UBE2N 519094 sc-eQTL 7.08e-02 -0.294 0.161 0.941 PB L2
ENSG00000198015 MRPL42 493553 sc-eQTL 5.14e-01 0.147 0.224 0.941 PB L2
ENSG00000257345 LINC02413 961823 sc-eQTL 5.77e-02 0.411 0.214 0.941 PB L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 8.11e-01 -0.0356 0.149 0.933 Pro_T L2
ENSG00000120833 SOCS2 391227 sc-eQTL 4.36e-01 -0.124 0.159 0.933 Pro_T L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 6.92e-02 -0.306 0.168 0.933 Pro_T L2
ENSG00000169372 CRADD 283666 sc-eQTL 7.36e-01 0.0556 0.165 0.933 Pro_T L2
ENSG00000173588 CEP83 -498947 sc-eQTL 7.74e-01 -0.0481 0.167 0.933 Pro_T L2
ENSG00000173598 NUDT4 583158 sc-eQTL 9.77e-01 0.00379 0.134 0.933 Pro_T L2
ENSG00000177889 UBE2N 519094 sc-eQTL 1.78e-01 0.166 0.123 0.933 Pro_T L2
ENSG00000198015 MRPL42 493553 sc-eQTL 2.99e-01 -0.154 0.148 0.933 Pro_T L2
ENSG00000120833 SOCS2 391227 sc-eQTL 2.12e-01 0.179 0.143 0.929 Treg L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 4.35e-01 -0.118 0.151 0.929 Treg L2
ENSG00000169372 CRADD 283666 sc-eQTL 9.12e-01 -0.0193 0.175 0.929 Treg L2
ENSG00000173588 CEP83 -498947 sc-eQTL 4.99e-01 0.11 0.162 0.929 Treg L2
ENSG00000173598 NUDT4 583158 sc-eQTL 4.70e-01 0.0895 0.124 0.929 Treg L2
ENSG00000177889 UBE2N 519094 sc-eQTL 6.92e-01 0.0529 0.134 0.929 Treg L2
ENSG00000198015 MRPL42 493553 sc-eQTL 8.04e-01 -0.0418 0.168 0.929 Treg L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 3.06e-01 -0.178 0.174 0.929 cDC L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 3.41e-01 0.145 0.152 0.929 cDC L2
ENSG00000169372 CRADD 283666 sc-eQTL 6.89e-01 0.0674 0.168 0.929 cDC L2
ENSG00000173588 CEP83 -498947 sc-eQTL 9.91e-01 -0.00166 0.143 0.929 cDC L2
ENSG00000173598 NUDT4 583158 sc-eQTL 5.62e-01 -0.0992 0.171 0.929 cDC L2
ENSG00000177889 UBE2N 519094 sc-eQTL 9.93e-01 0.00126 0.149 0.929 cDC L2
ENSG00000198015 MRPL42 493553 sc-eQTL 3.71e-01 -0.152 0.17 0.929 cDC L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 6.02e-01 0.0675 0.129 0.929 cMono_IL1B L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 5.67e-01 -0.0653 0.114 0.929 cMono_IL1B L2
ENSG00000169372 CRADD 283666 sc-eQTL 6.76e-01 -0.0711 0.17 0.929 cMono_IL1B L2
ENSG00000173588 CEP83 -498947 sc-eQTL 1.91e-01 -0.203 0.155 0.929 cMono_IL1B L2
ENSG00000173598 NUDT4 583158 sc-eQTL 4.11e-01 -0.102 0.124 0.929 cMono_IL1B L2
ENSG00000177889 UBE2N 519094 sc-eQTL 4.96e-01 0.0663 0.0973 0.929 cMono_IL1B L2
ENSG00000198015 MRPL42 493553 sc-eQTL 7.85e-01 0.037 0.135 0.929 cMono_IL1B L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 7.88e-01 0.0395 0.147 0.929 cMono_S100A L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 6.80e-01 -0.0494 0.12 0.929 cMono_S100A L2
ENSG00000169372 CRADD 283666 sc-eQTL 1.42e-02 0.446 0.181 0.929 cMono_S100A L2
ENSG00000173588 CEP83 -498947 sc-eQTL 9.39e-01 -0.0129 0.169 0.929 cMono_S100A L2
ENSG00000173598 NUDT4 583158 sc-eQTL 4.97e-01 0.0978 0.144 0.929 cMono_S100A L2
ENSG00000177889 UBE2N 519094 sc-eQTL 6.16e-01 0.0629 0.125 0.929 cMono_S100A L2
ENSG00000198015 MRPL42 493553 sc-eQTL 8.29e-01 0.0311 0.144 0.929 cMono_S100A L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 8.76e-01 -0.0248 0.158 0.915 gdT L2
ENSG00000120833 SOCS2 391227 sc-eQTL 9.89e-01 -0.00272 0.191 0.915 gdT L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 8.48e-01 -0.0384 0.199 0.915 gdT L2
ENSG00000169372 CRADD 283666 sc-eQTL 1.29e-01 -0.296 0.194 0.915 gdT L2
ENSG00000173588 CEP83 -498947 sc-eQTL 6.90e-01 -0.0778 0.195 0.915 gdT L2
ENSG00000173598 NUDT4 583158 sc-eQTL 1.92e-01 -0.243 0.185 0.915 gdT L2
ENSG00000177889 UBE2N 519094 sc-eQTL 2.60e-01 0.229 0.203 0.915 gdT L2
ENSG00000198015 MRPL42 493553 sc-eQTL 4.59e-02 -0.394 0.196 0.915 gdT L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 7.50e-01 0.0548 0.171 0.929 intMono L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 6.83e-01 0.0592 0.145 0.929 intMono L2
ENSG00000169372 CRADD 283666 sc-eQTL 4.97e-01 0.113 0.167 0.929 intMono L2
ENSG00000173588 CEP83 -498947 sc-eQTL 8.83e-01 0.0257 0.174 0.929 intMono L2
ENSG00000173598 NUDT4 583158 sc-eQTL 4.28e-01 -0.12 0.152 0.929 intMono L2
ENSG00000177889 UBE2N 519094 sc-eQTL 4.26e-01 -0.115 0.144 0.929 intMono L2
ENSG00000198015 MRPL42 493553 sc-eQTL 7.11e-02 -0.28 0.154 0.929 intMono L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 2.67e-01 -0.173 0.156 0.93 ncMono L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 3.59e-01 -0.0987 0.107 0.93 ncMono L2
ENSG00000169372 CRADD 283666 sc-eQTL 9.07e-01 0.0196 0.168 0.93 ncMono L2
ENSG00000173588 CEP83 -498947 sc-eQTL 2.06e-01 -0.212 0.168 0.93 ncMono L2
ENSG00000173598 NUDT4 583158 sc-eQTL 2.38e-01 -0.174 0.147 0.93 ncMono L2
ENSG00000177889 UBE2N 519094 sc-eQTL 7.92e-01 0.0379 0.143 0.93 ncMono L2
ENSG00000198015 MRPL42 493553 sc-eQTL 6.28e-01 -0.0722 0.149 0.93 ncMono L2
ENSG00000057704 TMCC3 -689516 sc-eQTL 1.93e-02 0.395 0.167 0.924 pDC L2
ENSG00000136040 PLXNC1 -187536 sc-eQTL 4.40e-01 0.131 0.169 0.924 pDC L2
ENSG00000169372 CRADD 283666 sc-eQTL 9.96e-01 -0.000902 0.171 0.924 pDC L2
ENSG00000173588 CEP83 -498947 sc-eQTL 3.40e-01 -0.174 0.182 0.924 pDC L2
ENSG00000173598 NUDT4 583158 sc-eQTL 3.87e-01 0.127 0.147 0.924 pDC L2
ENSG00000177889 UBE2N 519094 sc-eQTL 1.83e-01 0.232 0.174 0.924 pDC L2
ENSG00000198015 MRPL42 493553 sc-eQTL 9.06e-01 -0.0215 0.181 0.924 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -689516 sc-eQTL 4.08e-01 0.142 0.171 0.929 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -187536 sc-eQTL 7.89e-01 -0.0279 0.104 0.929 B_Memory LOneK1K
ENSG00000169372 CRADD 283666 sc-eQTL 4.39e-01 0.137 0.177 0.929 B_Memory LOneK1K
ENSG00000173588 CEP83 -498947 sc-eQTL 5.16e-01 -0.0943 0.145 0.929 B_Memory LOneK1K
ENSG00000173598 NUDT4 583158 sc-eQTL 7.94e-01 0.0273 0.105 0.929 B_Memory LOneK1K
ENSG00000177889 UBE2N 519094 sc-eQTL 2.69e-01 0.105 0.095 0.929 B_Memory LOneK1K
ENSG00000198015 MRPL42 493553 sc-eQTL 1.89e-01 -0.204 0.155 0.929 B_Memory LOneK1K
ENSG00000257345 LINC02413 961823 sc-eQTL 3.69e-01 0.145 0.161 0.929 B_Memory LOneK1K
ENSG00000057704 TMCC3 -689516 sc-eQTL 3.17e-01 -0.153 0.153 0.929 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -187536 sc-eQTL 8.61e-01 -0.0219 0.124 0.929 B_Naive LOneK1K
ENSG00000169372 CRADD 283666 sc-eQTL 3.70e-01 0.148 0.165 0.929 B_Naive LOneK1K
ENSG00000173588 CEP83 -498947 sc-eQTL 1.12e-01 -0.206 0.129 0.929 B_Naive LOneK1K
ENSG00000173598 NUDT4 583158 sc-eQTL 7.36e-01 -0.0406 0.12 0.929 B_Naive LOneK1K
ENSG00000177889 UBE2N 519094 sc-eQTL 8.61e-01 0.0217 0.123 0.929 B_Naive LOneK1K
ENSG00000198015 MRPL42 493553 sc-eQTL 1.95e-03 -0.466 0.149 0.929 B_Naive LOneK1K
ENSG00000257345 LINC02413 961823 sc-eQTL 3.47e-01 0.147 0.156 0.929 B_Naive LOneK1K
ENSG00000057704 TMCC3 -689516 sc-eQTL 5.00e-01 0.0805 0.119 0.929 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -187536 sc-eQTL 5.83e-01 -0.0581 0.106 0.929 CD14_Mono LOneK1K
ENSG00000169372 CRADD 283666 sc-eQTL 3.21e-01 0.169 0.17 0.929 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -498947 sc-eQTL 3.06e-01 -0.147 0.144 0.929 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 583158 sc-eQTL 5.23e-01 -0.078 0.122 0.929 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 519094 sc-eQTL 5.89e-01 0.0497 0.0918 0.929 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 493553 sc-eQTL 4.93e-01 0.0874 0.127 0.929 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 -689516 sc-eQTL 7.38e-01 -0.0529 0.158 0.929 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -187536 sc-eQTL 5.85e-01 -0.0549 0.1 0.929 CD16_Mono LOneK1K
ENSG00000169372 CRADD 283666 sc-eQTL 7.50e-01 0.0579 0.182 0.929 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -498947 sc-eQTL 4.34e-01 -0.131 0.167 0.929 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 583158 sc-eQTL 7.19e-01 -0.049 0.136 0.929 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 519094 sc-eQTL 6.27e-01 -0.0662 0.136 0.929 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 493553 sc-eQTL 4.95e-01 -0.098 0.143 0.929 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 -689516 sc-eQTL 7.00e-02 -0.26 0.143 0.929 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 391227 sc-eQTL 4.25e-01 0.0893 0.112 0.929 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -187536 sc-eQTL 3.72e-01 -0.109 0.122 0.929 NK_CD56dim LOneK1K
ENSG00000169372 CRADD 283666 sc-eQTL 4.42e-02 -0.347 0.171 0.929 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -498947 sc-eQTL 2.14e-01 -0.171 0.137 0.929 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 583158 sc-eQTL 1.16e-01 -0.172 0.109 0.929 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 519094 sc-eQTL 7.77e-01 0.0301 0.106 0.929 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 493553 sc-eQTL 7.49e-01 -0.0508 0.159 0.929 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 389273 sc-eQTL 6.71e-01 -0.074 0.174 0.929 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000258357 AC023161.2 -560828 eQTL 0.0447 -0.114 0.0565 0.0 0.0 0.0805
ENSG00000278916 CEP83-DT -498962 eQTL 0.0115 -0.159 0.0626 0.00115 0.0 0.0805

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina