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Genes within 1Mb (chr12:93946301:G:GT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -704256 sc-eQTL 7.00e-01 0.0323 0.0837 0.532 B L1
ENSG00000136040 PLXNC1 -202276 sc-eQTL 9.46e-01 0.00323 0.0475 0.532 B L1
ENSG00000169372 CRADD 268926 sc-eQTL 3.42e-02 0.152 0.0711 0.532 B L1
ENSG00000173588 CEP83 -513687 sc-eQTL 5.32e-01 0.0375 0.0599 0.532 B L1
ENSG00000173598 NUDT4 568418 sc-eQTL 7.99e-01 -0.0136 0.0534 0.532 B L1
ENSG00000177889 UBE2N 504354 sc-eQTL 3.53e-01 -0.0437 0.047 0.532 B L1
ENSG00000198015 MRPL42 478813 sc-eQTL 9.47e-01 -0.00486 0.0736 0.532 B L1
ENSG00000257345 LINC02413 947083 sc-eQTL 8.01e-01 0.0184 0.0732 0.532 B L1
ENSG00000120833 SOCS2 376487 sc-eQTL 5.08e-01 -0.0318 0.048 0.532 CD4T L1
ENSG00000136040 PLXNC1 -202276 sc-eQTL 9.49e-01 -0.00322 0.0505 0.532 CD4T L1
ENSG00000169372 CRADD 268926 sc-eQTL 4.52e-03 0.233 0.0812 0.532 CD4T L1
ENSG00000173588 CEP83 -513687 sc-eQTL 7.25e-01 0.0187 0.0529 0.532 CD4T L1
ENSG00000173598 NUDT4 568418 sc-eQTL 2.90e-01 -0.0505 0.0476 0.532 CD4T L1
ENSG00000177889 UBE2N 504354 sc-eQTL 9.81e-01 0.00106 0.0443 0.532 CD4T L1
ENSG00000198015 MRPL42 478813 sc-eQTL 3.64e-01 0.07 0.077 0.532 CD4T L1
ENSG00000057704 TMCC3 -704256 sc-eQTL 7.13e-01 -0.0179 0.0486 0.532 CD8T L1
ENSG00000120833 SOCS2 376487 sc-eQTL 9.43e-02 0.109 0.0646 0.532 CD8T L1
ENSG00000136040 PLXNC1 -202276 sc-eQTL 4.95e-01 -0.0457 0.0669 0.532 CD8T L1
ENSG00000169372 CRADD 268926 sc-eQTL 4.46e-01 -0.06 0.0786 0.532 CD8T L1
ENSG00000173588 CEP83 -513687 sc-eQTL 3.59e-01 -0.0573 0.0624 0.532 CD8T L1
ENSG00000173598 NUDT4 568418 sc-eQTL 5.47e-02 -0.0895 0.0463 0.532 CD8T L1
ENSG00000177889 UBE2N 504354 sc-eQTL 1.61e-01 -0.0814 0.0579 0.532 CD8T L1
ENSG00000198015 MRPL42 478813 sc-eQTL 4.75e-01 0.0592 0.0828 0.532 CD8T L1
ENSG00000057704 TMCC3 -704256 sc-eQTL 5.46e-01 -0.0547 0.0905 0.527 DC L1
ENSG00000136040 PLXNC1 -202276 sc-eQTL 1.03e-01 -0.132 0.0806 0.527 DC L1
ENSG00000169372 CRADD 268926 sc-eQTL 3.78e-01 0.0807 0.0914 0.527 DC L1
ENSG00000173588 CEP83 -513687 sc-eQTL 6.02e-01 0.0377 0.0722 0.527 DC L1
ENSG00000173598 NUDT4 568418 sc-eQTL 4.00e-01 0.0634 0.0751 0.527 DC L1
ENSG00000177889 UBE2N 504354 sc-eQTL 9.38e-01 0.00595 0.076 0.527 DC L1
ENSG00000198015 MRPL42 478813 sc-eQTL 1.14e-01 0.138 0.0868 0.527 DC L1
ENSG00000057704 TMCC3 -704256 sc-eQTL 4.42e-01 0.0481 0.0624 0.532 Mono L1
ENSG00000136040 PLXNC1 -202276 sc-eQTL 5.39e-01 -0.0318 0.0517 0.532 Mono L1
ENSG00000169372 CRADD 268926 sc-eQTL 1.90e-01 0.125 0.0949 0.532 Mono L1
ENSG00000173588 CEP83 -513687 sc-eQTL 9.01e-01 0.00949 0.0765 0.532 Mono L1
ENSG00000173598 NUDT4 568418 sc-eQTL 3.07e-01 -0.0672 0.0656 0.532 Mono L1
ENSG00000177889 UBE2N 504354 sc-eQTL 6.62e-01 -0.0216 0.0493 0.532 Mono L1
ENSG00000198015 MRPL42 478813 sc-eQTL 3.00e-02 0.143 0.0656 0.532 Mono L1
ENSG00000057704 TMCC3 -704256 sc-eQTL 7.12e-01 0.0275 0.0743 0.53 NK L1
ENSG00000120833 SOCS2 376487 sc-eQTL 2.37e-01 0.0689 0.058 0.53 NK L1
ENSG00000136040 PLXNC1 -202276 sc-eQTL 2.24e-01 -0.0739 0.0606 0.53 NK L1
ENSG00000169372 CRADD 268926 sc-eQTL 4.26e-01 -0.0695 0.0872 0.53 NK L1
ENSG00000173588 CEP83 -513687 sc-eQTL 2.06e-01 -0.0873 0.0689 0.53 NK L1
ENSG00000173598 NUDT4 568418 sc-eQTL 7.73e-02 -0.0996 0.0561 0.53 NK L1
ENSG00000177889 UBE2N 504354 sc-eQTL 6.45e-01 -0.0258 0.0559 0.53 NK L1
ENSG00000198015 MRPL42 478813 sc-eQTL 3.50e-01 0.0747 0.0797 0.53 NK L1
ENSG00000246985 SOCS2-AS1 374533 sc-eQTL 2.66e-01 0.101 0.0908 0.53 NK L1
ENSG00000057704 TMCC3 -704256 sc-eQTL 4.92e-01 -0.0528 0.0767 0.532 Other_T L1
ENSG00000120833 SOCS2 376487 sc-eQTL 6.55e-01 0.0339 0.0757 0.532 Other_T L1
ENSG00000136040 PLXNC1 -202276 sc-eQTL 6.63e-02 -0.13 0.0705 0.532 Other_T L1
ENSG00000169372 CRADD 268926 sc-eQTL 1.65e-01 -0.119 0.0855 0.532 Other_T L1
ENSG00000173588 CEP83 -513687 sc-eQTL 1.72e-01 -0.109 0.0796 0.532 Other_T L1
ENSG00000173598 NUDT4 568418 sc-eQTL 5.48e-01 0.0369 0.0613 0.532 Other_T L1
ENSG00000177889 UBE2N 504354 sc-eQTL 2.61e-01 -0.0639 0.0567 0.532 Other_T L1
ENSG00000198015 MRPL42 478813 sc-eQTL 8.39e-01 -0.0137 0.0673 0.532 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -704256 sc-eQTL 8.71e-01 -0.0138 0.0848 0.538 B_Activated L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 4.95e-01 0.0547 0.08 0.538 B_Activated L2
ENSG00000169372 CRADD 268926 sc-eQTL 4.17e-01 0.0762 0.0938 0.538 B_Activated L2
ENSG00000173588 CEP83 -513687 sc-eQTL 8.67e-01 -0.0167 0.0997 0.538 B_Activated L2
ENSG00000173598 NUDT4 568418 sc-eQTL 4.87e-01 -0.0582 0.0835 0.538 B_Activated L2
ENSG00000177889 UBE2N 504354 sc-eQTL 6.82e-01 0.0425 0.104 0.538 B_Activated L2
ENSG00000198015 MRPL42 478813 sc-eQTL 5.57e-01 0.0593 0.101 0.538 B_Activated L2
ENSG00000257345 LINC02413 947083 sc-eQTL 9.51e-01 -0.00602 0.0976 0.538 B_Activated L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 9.59e-01 0.00446 0.0874 0.532 B_Intermediate L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 8.95e-01 0.00974 0.0735 0.532 B_Intermediate L2
ENSG00000169372 CRADD 268926 sc-eQTL 1.12e-01 0.139 0.0869 0.532 B_Intermediate L2
ENSG00000173588 CEP83 -513687 sc-eQTL 9.94e-01 0.000613 0.0815 0.532 B_Intermediate L2
ENSG00000173598 NUDT4 568418 sc-eQTL 3.79e-01 -0.0642 0.0727 0.532 B_Intermediate L2
ENSG00000177889 UBE2N 504354 sc-eQTL 1.91e-01 -0.097 0.0739 0.532 B_Intermediate L2
ENSG00000198015 MRPL42 478813 sc-eQTL 1.95e-01 0.117 0.0901 0.532 B_Intermediate L2
ENSG00000257345 LINC02413 947083 sc-eQTL 5.03e-01 0.0597 0.0891 0.532 B_Intermediate L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 4.38e-02 0.183 0.0905 0.53 B_Memory L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 5.76e-01 0.0396 0.0707 0.53 B_Memory L2
ENSG00000169372 CRADD 268926 sc-eQTL 4.69e-01 0.067 0.0924 0.53 B_Memory L2
ENSG00000173588 CEP83 -513687 sc-eQTL 3.87e-02 -0.17 0.0817 0.53 B_Memory L2
ENSG00000173598 NUDT4 568418 sc-eQTL 9.94e-01 0.000537 0.0663 0.53 B_Memory L2
ENSG00000177889 UBE2N 504354 sc-eQTL 3.11e-01 -0.0601 0.0592 0.53 B_Memory L2
ENSG00000198015 MRPL42 478813 sc-eQTL 5.77e-01 0.0492 0.088 0.53 B_Memory L2
ENSG00000257345 LINC02413 947083 sc-eQTL 1.57e-01 -0.125 0.0876 0.53 B_Memory L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 3.82e-01 -0.0745 0.0851 0.532 B_Naive1 L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 4.63e-01 0.0532 0.0723 0.532 B_Naive1 L2
ENSG00000169372 CRADD 268926 sc-eQTL 1.67e-01 0.125 0.0905 0.532 B_Naive1 L2
ENSG00000173588 CEP83 -513687 sc-eQTL 9.14e-01 0.00807 0.0748 0.532 B_Naive1 L2
ENSG00000173598 NUDT4 568418 sc-eQTL 7.78e-01 -0.0183 0.065 0.532 B_Naive1 L2
ENSG00000177889 UBE2N 504354 sc-eQTL 2.14e-01 0.087 0.0697 0.532 B_Naive1 L2
ENSG00000198015 MRPL42 478813 sc-eQTL 7.61e-01 0.0246 0.0808 0.532 B_Naive1 L2
ENSG00000257345 LINC02413 947083 sc-eQTL 7.81e-01 0.0239 0.0856 0.532 B_Naive1 L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 4.17e-02 0.17 0.0831 0.53 B_Naive2 L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 7.66e-01 0.0234 0.0785 0.53 B_Naive2 L2
ENSG00000169372 CRADD 268926 sc-eQTL 4.21e-01 0.0712 0.0883 0.53 B_Naive2 L2
ENSG00000173588 CEP83 -513687 sc-eQTL 1.36e-01 0.123 0.0824 0.53 B_Naive2 L2
ENSG00000173598 NUDT4 568418 sc-eQTL 1.20e-01 0.114 0.0727 0.53 B_Naive2 L2
ENSG00000177889 UBE2N 504354 sc-eQTL 5.39e-01 -0.044 0.0715 0.53 B_Naive2 L2
ENSG00000198015 MRPL42 478813 sc-eQTL 3.77e-01 -0.0819 0.0926 0.53 B_Naive2 L2
ENSG00000257345 LINC02413 947083 sc-eQTL 7.73e-01 -0.0257 0.089 0.53 B_Naive2 L2
ENSG00000120833 SOCS2 376487 sc-eQTL 6.51e-01 0.0405 0.0894 0.525 CD4_CTL L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 4.65e-01 -0.0623 0.0851 0.525 CD4_CTL L2
ENSG00000169372 CRADD 268926 sc-eQTL 7.75e-01 -0.0247 0.0864 0.525 CD4_CTL L2
ENSG00000173588 CEP83 -513687 sc-eQTL 6.69e-01 0.0372 0.0871 0.525 CD4_CTL L2
ENSG00000173598 NUDT4 568418 sc-eQTL 1.84e-01 -0.112 0.0843 0.525 CD4_CTL L2
ENSG00000177889 UBE2N 504354 sc-eQTL 1.70e-01 -0.119 0.086 0.525 CD4_CTL L2
ENSG00000198015 MRPL42 478813 sc-eQTL 7.25e-01 -0.034 0.0965 0.525 CD4_CTL L2
ENSG00000120833 SOCS2 376487 sc-eQTL 7.04e-02 -0.0909 0.05 0.532 CD4_Naive L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 8.20e-01 0.0129 0.0569 0.532 CD4_Naive L2
ENSG00000169372 CRADD 268926 sc-eQTL 3.31e-03 0.253 0.0852 0.532 CD4_Naive L2
ENSG00000173588 CEP83 -513687 sc-eQTL 5.45e-01 0.0373 0.0615 0.532 CD4_Naive L2
ENSG00000173598 NUDT4 568418 sc-eQTL 4.18e-01 -0.0414 0.051 0.532 CD4_Naive L2
ENSG00000177889 UBE2N 504354 sc-eQTL 3.07e-01 0.05 0.0489 0.532 CD4_Naive L2
ENSG00000198015 MRPL42 478813 sc-eQTL 3.61e-01 0.0752 0.0821 0.532 CD4_Naive L2
ENSG00000120833 SOCS2 376487 sc-eQTL 5.55e-01 0.0338 0.0571 0.532 CD4_TCM L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 9.87e-01 0.00115 0.0679 0.532 CD4_TCM L2
ENSG00000169372 CRADD 268926 sc-eQTL 6.93e-01 0.0362 0.0916 0.532 CD4_TCM L2
ENSG00000173588 CEP83 -513687 sc-eQTL 7.74e-01 -0.0208 0.0724 0.532 CD4_TCM L2
ENSG00000173598 NUDT4 568418 sc-eQTL 4.04e-01 -0.048 0.0574 0.532 CD4_TCM L2
ENSG00000177889 UBE2N 504354 sc-eQTL 8.13e-01 -0.0131 0.0552 0.532 CD4_TCM L2
ENSG00000198015 MRPL42 478813 sc-eQTL 1.94e-01 0.109 0.084 0.532 CD4_TCM L2
ENSG00000120833 SOCS2 376487 sc-eQTL 2.18e-01 0.0764 0.0617 0.532 CD4_TEM L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 3.52e-01 -0.0691 0.0741 0.532 CD4_TEM L2
ENSG00000169372 CRADD 268926 sc-eQTL 1.73e-01 0.124 0.091 0.532 CD4_TEM L2
ENSG00000173588 CEP83 -513687 sc-eQTL 7.13e-02 0.15 0.0827 0.532 CD4_TEM L2
ENSG00000173598 NUDT4 568418 sc-eQTL 5.76e-01 -0.0403 0.072 0.532 CD4_TEM L2
ENSG00000177889 UBE2N 504354 sc-eQTL 1.54e-02 -0.178 0.073 0.532 CD4_TEM L2
ENSG00000198015 MRPL42 478813 sc-eQTL 2.54e-01 0.0929 0.0811 0.532 CD4_TEM L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 6.12e-01 -0.0376 0.074 0.532 CD8_CTL L2
ENSG00000120833 SOCS2 376487 sc-eQTL 6.52e-01 -0.0338 0.0748 0.532 CD8_CTL L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 2.02e-01 0.0969 0.0757 0.532 CD8_CTL L2
ENSG00000169372 CRADD 268926 sc-eQTL 1.28e-01 -0.14 0.0918 0.532 CD8_CTL L2
ENSG00000173588 CEP83 -513687 sc-eQTL 2.70e-02 -0.184 0.0827 0.532 CD8_CTL L2
ENSG00000173598 NUDT4 568418 sc-eQTL 5.02e-01 -0.046 0.0683 0.532 CD8_CTL L2
ENSG00000177889 UBE2N 504354 sc-eQTL 6.74e-01 0.0334 0.0794 0.532 CD8_CTL L2
ENSG00000198015 MRPL42 478813 sc-eQTL 7.91e-01 0.0241 0.091 0.532 CD8_CTL L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 3.64e-01 0.0606 0.0666 0.532 CD8_Naive L2
ENSG00000120833 SOCS2 376487 sc-eQTL 1.38e-02 0.171 0.069 0.532 CD8_Naive L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 4.29e-01 -0.062 0.0783 0.532 CD8_Naive L2
ENSG00000169372 CRADD 268926 sc-eQTL 6.52e-01 -0.0409 0.0906 0.532 CD8_Naive L2
ENSG00000173588 CEP83 -513687 sc-eQTL 9.24e-01 -0.00719 0.0756 0.532 CD8_Naive L2
ENSG00000173598 NUDT4 568418 sc-eQTL 2.45e-02 -0.14 0.062 0.532 CD8_Naive L2
ENSG00000177889 UBE2N 504354 sc-eQTL 1.59e-01 -0.0963 0.0681 0.532 CD8_Naive L2
ENSG00000198015 MRPL42 478813 sc-eQTL 3.62e-02 0.182 0.0865 0.532 CD8_Naive L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 4.98e-01 -0.0479 0.0706 0.528 CD8_TCM L2
ENSG00000120833 SOCS2 376487 sc-eQTL 8.80e-01 -0.0119 0.0787 0.528 CD8_TCM L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 9.47e-02 -0.148 0.0879 0.528 CD8_TCM L2
ENSG00000169372 CRADD 268926 sc-eQTL 6.80e-01 0.0386 0.0935 0.528 CD8_TCM L2
ENSG00000173588 CEP83 -513687 sc-eQTL 1.61e-01 0.127 0.0904 0.528 CD8_TCM L2
ENSG00000173598 NUDT4 568418 sc-eQTL 6.86e-01 -0.03 0.0743 0.528 CD8_TCM L2
ENSG00000177889 UBE2N 504354 sc-eQTL 5.81e-02 -0.167 0.0876 0.528 CD8_TCM L2
ENSG00000198015 MRPL42 478813 sc-eQTL 5.70e-01 0.0515 0.0905 0.528 CD8_TCM L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 9.58e-01 -0.00411 0.0789 0.525 CD8_TEM L2
ENSG00000120833 SOCS2 376487 sc-eQTL 4.30e-01 0.0664 0.084 0.525 CD8_TEM L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 8.01e-01 -0.0223 0.0885 0.525 CD8_TEM L2
ENSG00000169372 CRADD 268926 sc-eQTL 2.10e-01 -0.118 0.0934 0.525 CD8_TEM L2
ENSG00000173588 CEP83 -513687 sc-eQTL 3.23e-01 -0.0903 0.0911 0.525 CD8_TEM L2
ENSG00000173598 NUDT4 568418 sc-eQTL 7.97e-01 0.0222 0.0864 0.525 CD8_TEM L2
ENSG00000177889 UBE2N 504354 sc-eQTL 7.20e-01 0.0297 0.0825 0.525 CD8_TEM L2
ENSG00000198015 MRPL42 478813 sc-eQTL 8.56e-01 -0.0155 0.0855 0.525 CD8_TEM L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 1.92e-01 0.0994 0.076 0.53 MAIT L2
ENSG00000120833 SOCS2 376487 sc-eQTL 6.14e-01 0.041 0.0811 0.53 MAIT L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 6.19e-02 -0.139 0.0741 0.53 MAIT L2
ENSG00000169372 CRADD 268926 sc-eQTL 2.31e-01 -0.114 0.0947 0.53 MAIT L2
ENSG00000173588 CEP83 -513687 sc-eQTL 9.92e-02 -0.141 0.085 0.53 MAIT L2
ENSG00000173598 NUDT4 568418 sc-eQTL 5.40e-01 -0.0423 0.0689 0.53 MAIT L2
ENSG00000177889 UBE2N 504354 sc-eQTL 4.14e-01 -0.0692 0.0844 0.53 MAIT L2
ENSG00000198015 MRPL42 478813 sc-eQTL 4.52e-01 -0.065 0.0863 0.53 MAIT L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 8.96e-01 0.0117 0.0892 0.527 NK_CD56bright L2
ENSG00000120833 SOCS2 376487 sc-eQTL 1.70e-01 0.111 0.0806 0.527 NK_CD56bright L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 3.17e-01 0.079 0.0787 0.527 NK_CD56bright L2
ENSG00000169372 CRADD 268926 sc-eQTL 9.50e-01 -0.006 0.0959 0.527 NK_CD56bright L2
ENSG00000173588 CEP83 -513687 sc-eQTL 7.01e-01 0.0307 0.0798 0.527 NK_CD56bright L2
ENSG00000173598 NUDT4 568418 sc-eQTL 6.34e-01 -0.0407 0.0854 0.527 NK_CD56bright L2
ENSG00000177889 UBE2N 504354 sc-eQTL 9.85e-01 0.00176 0.0907 0.527 NK_CD56bright L2
ENSG00000198015 MRPL42 478813 sc-eQTL 6.32e-01 0.0433 0.0903 0.527 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 374533 sc-eQTL 2.72e-01 0.0924 0.0839 0.527 NK_CD56bright L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 7.58e-01 -0.0238 0.077 0.528 NK_CD56dim L2
ENSG00000120833 SOCS2 376487 sc-eQTL 9.67e-01 -0.00269 0.0657 0.528 NK_CD56dim L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 4.63e-01 -0.0525 0.0713 0.528 NK_CD56dim L2
ENSG00000169372 CRADD 268926 sc-eQTL 9.52e-01 0.00556 0.093 0.528 NK_CD56dim L2
ENSG00000173588 CEP83 -513687 sc-eQTL 3.90e-02 -0.17 0.0817 0.528 NK_CD56dim L2
ENSG00000173598 NUDT4 568418 sc-eQTL 4.78e-01 -0.0468 0.0658 0.528 NK_CD56dim L2
ENSG00000177889 UBE2N 504354 sc-eQTL 8.70e-01 -0.0104 0.0633 0.528 NK_CD56dim L2
ENSG00000198015 MRPL42 478813 sc-eQTL 1.46e-01 0.127 0.0873 0.528 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 374533 sc-eQTL 7.04e-01 -0.0343 0.0902 0.528 NK_CD56dim L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 9.23e-01 0.0085 0.0873 0.53 NK_HLA L2
ENSG00000120833 SOCS2 376487 sc-eQTL 5.44e-01 0.0526 0.0865 0.53 NK_HLA L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 2.17e-01 -0.0975 0.0788 0.53 NK_HLA L2
ENSG00000169372 CRADD 268926 sc-eQTL 4.46e-01 -0.074 0.0968 0.53 NK_HLA L2
ENSG00000173588 CEP83 -513687 sc-eQTL 2.32e-01 0.109 0.0905 0.53 NK_HLA L2
ENSG00000173598 NUDT4 568418 sc-eQTL 3.48e-01 -0.0761 0.0808 0.53 NK_HLA L2
ENSG00000177889 UBE2N 504354 sc-eQTL 8.86e-01 -0.0131 0.0908 0.53 NK_HLA L2
ENSG00000198015 MRPL42 478813 sc-eQTL 8.12e-01 -0.0241 0.101 0.53 NK_HLA L2
ENSG00000246985 SOCS2-AS1 374533 sc-eQTL 1.56e-01 0.116 0.0814 0.53 NK_HLA L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 7.04e-01 0.0316 0.0832 0.528 NK_cytokine L2
ENSG00000120833 SOCS2 376487 sc-eQTL 3.06e-02 0.157 0.072 0.528 NK_cytokine L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 6.53e-01 -0.0332 0.0738 0.528 NK_cytokine L2
ENSG00000169372 CRADD 268926 sc-eQTL 6.13e-01 -0.0417 0.0824 0.528 NK_cytokine L2
ENSG00000173588 CEP83 -513687 sc-eQTL 8.06e-01 -0.0208 0.0847 0.528 NK_cytokine L2
ENSG00000173598 NUDT4 568418 sc-eQTL 6.67e-01 -0.0279 0.0648 0.528 NK_cytokine L2
ENSG00000177889 UBE2N 504354 sc-eQTL 6.81e-01 -0.0307 0.0745 0.528 NK_cytokine L2
ENSG00000198015 MRPL42 478813 sc-eQTL 8.26e-01 0.019 0.0864 0.528 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 374533 sc-eQTL 1.95e-01 0.112 0.086 0.528 NK_cytokine L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 7.80e-01 0.028 0.0998 0.57 PB L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 3.37e-01 0.0981 0.102 0.57 PB L2
ENSG00000169372 CRADD 268926 sc-eQTL 2.34e-01 -0.112 0.0936 0.57 PB L2
ENSG00000173588 CEP83 -513687 sc-eQTL 1.90e-01 0.139 0.106 0.57 PB L2
ENSG00000173598 NUDT4 568418 sc-eQTL 5.84e-01 -0.0482 0.088 0.57 PB L2
ENSG00000177889 UBE2N 504354 sc-eQTL 2.45e-01 -0.0901 0.0771 0.57 PB L2
ENSG00000198015 MRPL42 478813 sc-eQTL 1.55e-01 -0.151 0.106 0.57 PB L2
ENSG00000257345 LINC02413 947083 sc-eQTL 6.73e-02 0.188 0.102 0.57 PB L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 6.90e-01 -0.0304 0.0762 0.533 Pro_T L2
ENSG00000120833 SOCS2 376487 sc-eQTL 3.24e-01 -0.0803 0.0812 0.533 Pro_T L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 2.99e-01 -0.09 0.0864 0.533 Pro_T L2
ENSG00000169372 CRADD 268926 sc-eQTL 6.19e-01 -0.0421 0.0846 0.533 Pro_T L2
ENSG00000173588 CEP83 -513687 sc-eQTL 3.88e-01 -0.0741 0.0857 0.533 Pro_T L2
ENSG00000173598 NUDT4 568418 sc-eQTL 2.10e-01 0.0859 0.0683 0.533 Pro_T L2
ENSG00000177889 UBE2N 504354 sc-eQTL 6.10e-01 -0.0323 0.0632 0.533 Pro_T L2
ENSG00000198015 MRPL42 478813 sc-eQTL 9.45e-01 0.00526 0.076 0.533 Pro_T L2
ENSG00000120833 SOCS2 376487 sc-eQTL 6.78e-01 0.0319 0.0768 0.532 Treg L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 8.87e-01 -0.0115 0.0809 0.532 Treg L2
ENSG00000169372 CRADD 268926 sc-eQTL 4.70e-01 0.0676 0.0934 0.532 Treg L2
ENSG00000173588 CEP83 -513687 sc-eQTL 5.58e-01 0.0507 0.0866 0.532 Treg L2
ENSG00000173598 NUDT4 568418 sc-eQTL 6.57e-01 -0.0294 0.0662 0.532 Treg L2
ENSG00000177889 UBE2N 504354 sc-eQTL 2.12e-01 0.0891 0.0712 0.532 Treg L2
ENSG00000198015 MRPL42 478813 sc-eQTL 6.86e-01 0.0363 0.0899 0.532 Treg L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 8.84e-01 -0.0139 0.0951 0.517 cDC L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 7.77e-01 -0.0235 0.0831 0.517 cDC L2
ENSG00000169372 CRADD 268926 sc-eQTL 1.79e-01 0.123 0.0914 0.517 cDC L2
ENSG00000173588 CEP83 -513687 sc-eQTL 7.03e-01 0.0297 0.0779 0.517 cDC L2
ENSG00000173598 NUDT4 568418 sc-eQTL 7.97e-01 0.024 0.0933 0.517 cDC L2
ENSG00000177889 UBE2N 504354 sc-eQTL 3.57e-01 0.0749 0.081 0.517 cDC L2
ENSG00000198015 MRPL42 478813 sc-eQTL 4.03e-01 0.0778 0.0929 0.517 cDC L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 3.96e-01 0.06 0.0706 0.532 cMono_IL1B L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 2.24e-01 -0.0757 0.0621 0.532 cMono_IL1B L2
ENSG00000169372 CRADD 268926 sc-eQTL 5.81e-01 0.0511 0.0926 0.532 cMono_IL1B L2
ENSG00000173588 CEP83 -513687 sc-eQTL 5.46e-01 -0.0513 0.0849 0.532 cMono_IL1B L2
ENSG00000173598 NUDT4 568418 sc-eQTL 6.37e-01 -0.0321 0.0679 0.532 cMono_IL1B L2
ENSG00000177889 UBE2N 504354 sc-eQTL 5.75e-01 0.0298 0.0532 0.532 cMono_IL1B L2
ENSG00000198015 MRPL42 478813 sc-eQTL 2.17e-01 0.0911 0.0735 0.532 cMono_IL1B L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 4.80e-01 -0.0563 0.0797 0.532 cMono_S100A L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 9.04e-01 0.00782 0.065 0.532 cMono_S100A L2
ENSG00000169372 CRADD 268926 sc-eQTL 4.59e-01 0.0738 0.0994 0.532 cMono_S100A L2
ENSG00000173588 CEP83 -513687 sc-eQTL 4.05e-01 0.0766 0.0918 0.532 cMono_S100A L2
ENSG00000173598 NUDT4 568418 sc-eQTL 6.67e-01 -0.0337 0.0782 0.532 cMono_S100A L2
ENSG00000177889 UBE2N 504354 sc-eQTL 4.43e-01 -0.0523 0.068 0.532 cMono_S100A L2
ENSG00000198015 MRPL42 478813 sc-eQTL 2.51e-01 0.0897 0.0779 0.532 cMono_S100A L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 5.46e-03 -0.245 0.0867 0.524 gdT L2
ENSG00000120833 SOCS2 376487 sc-eQTL 9.97e-01 -0.000437 0.107 0.524 gdT L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 4.63e-02 0.223 0.111 0.524 gdT L2
ENSG00000169372 CRADD 268926 sc-eQTL 2.92e-02 -0.239 0.108 0.524 gdT L2
ENSG00000173588 CEP83 -513687 sc-eQTL 9.87e-01 -0.00185 0.11 0.524 gdT L2
ENSG00000173598 NUDT4 568418 sc-eQTL 1.83e-01 0.139 0.104 0.524 gdT L2
ENSG00000177889 UBE2N 504354 sc-eQTL 7.13e-01 0.0422 0.115 0.524 gdT L2
ENSG00000198015 MRPL42 478813 sc-eQTL 6.53e-01 -0.0503 0.112 0.524 gdT L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 5.35e-01 -0.0584 0.094 0.529 intMono L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 2.58e-01 0.0897 0.0791 0.529 intMono L2
ENSG00000169372 CRADD 268926 sc-eQTL 2.62e-01 0.102 0.0912 0.529 intMono L2
ENSG00000173588 CEP83 -513687 sc-eQTL 7.82e-01 -0.0264 0.0956 0.529 intMono L2
ENSG00000173598 NUDT4 568418 sc-eQTL 6.79e-01 -0.0345 0.0832 0.529 intMono L2
ENSG00000177889 UBE2N 504354 sc-eQTL 4.56e-01 -0.0591 0.0792 0.529 intMono L2
ENSG00000198015 MRPL42 478813 sc-eQTL 8.03e-01 -0.0214 0.0854 0.529 intMono L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 8.04e-01 0.0207 0.0835 0.529 ncMono L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 5.92e-01 -0.0309 0.0575 0.529 ncMono L2
ENSG00000169372 CRADD 268926 sc-eQTL 3.28e-01 0.0877 0.0894 0.529 ncMono L2
ENSG00000173588 CEP83 -513687 sc-eQTL 2.45e-01 -0.105 0.0897 0.529 ncMono L2
ENSG00000173598 NUDT4 568418 sc-eQTL 6.51e-01 -0.0357 0.0787 0.529 ncMono L2
ENSG00000177889 UBE2N 504354 sc-eQTL 1.64e-01 0.107 0.0764 0.529 ncMono L2
ENSG00000198015 MRPL42 478813 sc-eQTL 2.48e-01 0.0918 0.0793 0.529 ncMono L2
ENSG00000057704 TMCC3 -704256 sc-eQTL 4.18e-01 0.0788 0.0971 0.517 pDC L2
ENSG00000136040 PLXNC1 -202276 sc-eQTL 1.17e-01 -0.151 0.0961 0.517 pDC L2
ENSG00000169372 CRADD 268926 sc-eQTL 4.42e-01 0.0753 0.0978 0.517 pDC L2
ENSG00000173588 CEP83 -513687 sc-eQTL 4.34e-01 -0.0816 0.104 0.517 pDC L2
ENSG00000173598 NUDT4 568418 sc-eQTL 6.58e-01 0.0374 0.0843 0.517 pDC L2
ENSG00000177889 UBE2N 504354 sc-eQTL 7.70e-01 0.0293 0.0999 0.517 pDC L2
ENSG00000198015 MRPL42 478813 sc-eQTL 9.12e-01 -0.0115 0.103 0.517 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -704256 sc-eQTL 6.56e-01 0.0405 0.0907 0.532 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -202276 sc-eQTL 8.23e-01 0.0123 0.0549 0.532 B_Memory LOneK1K
ENSG00000169372 CRADD 268926 sc-eQTL 3.74e-02 0.194 0.0925 0.532 B_Memory LOneK1K
ENSG00000173588 CEP83 -513687 sc-eQTL 4.26e-01 -0.0611 0.0765 0.532 B_Memory LOneK1K
ENSG00000173598 NUDT4 568418 sc-eQTL 8.29e-01 -0.0119 0.0552 0.532 B_Memory LOneK1K
ENSG00000177889 UBE2N 504354 sc-eQTL 1.24e-01 -0.0773 0.05 0.532 B_Memory LOneK1K
ENSG00000198015 MRPL42 478813 sc-eQTL 1.31e-01 0.124 0.0816 0.532 B_Memory LOneK1K
ENSG00000257345 LINC02413 947083 sc-eQTL 6.13e-01 0.0432 0.0854 0.532 B_Memory LOneK1K
ENSG00000057704 TMCC3 -704256 sc-eQTL 5.42e-01 0.0499 0.0818 0.532 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -202276 sc-eQTL 5.59e-01 0.0388 0.0664 0.532 B_Naive LOneK1K
ENSG00000169372 CRADD 268926 sc-eQTL 1.13e-01 0.139 0.0876 0.532 B_Naive LOneK1K
ENSG00000173588 CEP83 -513687 sc-eQTL 4.57e-01 0.0515 0.0692 0.532 B_Naive LOneK1K
ENSG00000173598 NUDT4 568418 sc-eQTL 6.09e-01 0.0329 0.0643 0.532 B_Naive LOneK1K
ENSG00000177889 UBE2N 504354 sc-eQTL 5.46e-01 0.0398 0.0659 0.532 B_Naive LOneK1K
ENSG00000198015 MRPL42 478813 sc-eQTL 8.95e-01 -0.0107 0.0811 0.532 B_Naive LOneK1K
ENSG00000257345 LINC02413 947083 sc-eQTL 9.07e-01 -0.00971 0.0834 0.532 B_Naive LOneK1K
ENSG00000057704 TMCC3 -704256 sc-eQTL 7.81e-01 0.0179 0.0644 0.532 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -202276 sc-eQTL 4.71e-01 -0.0412 0.057 0.532 CD14_Mono LOneK1K
ENSG00000169372 CRADD 268926 sc-eQTL 4.15e-01 0.0751 0.092 0.532 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -513687 sc-eQTL 7.15e-01 0.0285 0.0778 0.532 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 568418 sc-eQTL 2.87e-01 -0.0703 0.0658 0.532 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 504354 sc-eQTL 4.10e-01 -0.0409 0.0496 0.532 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 478813 sc-eQTL 5.09e-02 0.134 0.0682 0.532 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 -704256 sc-eQTL 8.57e-01 -0.0153 0.0851 0.532 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -202276 sc-eQTL 7.18e-01 0.0196 0.0542 0.532 CD16_Mono LOneK1K
ENSG00000169372 CRADD 268926 sc-eQTL 2.22e-01 0.12 0.0977 0.532 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -513687 sc-eQTL 6.70e-01 -0.0385 0.0901 0.532 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 568418 sc-eQTL 5.97e-01 0.0388 0.0733 0.532 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 504354 sc-eQTL 3.49e-01 0.0688 0.0733 0.532 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 478813 sc-eQTL 2.01e-01 0.0989 0.0772 0.532 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 -704256 sc-eQTL 9.19e-01 0.00772 0.076 0.528 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 376487 sc-eQTL 1.48e-01 0.0853 0.0588 0.528 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -202276 sc-eQTL 1.63e-01 -0.0901 0.0643 0.528 NK_CD56dim LOneK1K
ENSG00000169372 CRADD 268926 sc-eQTL 5.23e-01 -0.0583 0.0912 0.528 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -513687 sc-eQTL 7.47e-02 -0.129 0.0721 0.528 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 568418 sc-eQTL 1.55e-01 -0.0823 0.0577 0.528 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 504354 sc-eQTL 4.49e-01 -0.0425 0.056 0.528 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 478813 sc-eQTL 3.33e-01 0.081 0.0835 0.528 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 374533 sc-eQTL 2.22e-01 0.112 0.0916 0.528 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000169372 \N 268926 8.31e-06 4.35e-06 8.15e-07 1.2e-06 3.09e-07 9.27e-07 1.61e-06 3.97e-07 1.69e-06 3.76e-07 1.96e-06 1.44e-06 4.2e-06 1.43e-06 5.01e-07 1.02e-06 1.19e-06 1.3e-06 8.2e-07 4.36e-07 6.02e-07 3.92e-06 3.24e-06 6.25e-07 3.57e-06 8.03e-07 8.34e-07 5.61e-07 1.99e-06 1.76e-06 7.63e-07 3.89e-08 2.08e-07 5.87e-07 8.71e-07 4.75e-07 8.28e-08 1.32e-07 1.49e-07 5.32e-08 8.68e-08 1.43e-05 4.01e-07 1.43e-08 1.89e-07 4.43e-08 1.07e-07 2e-09 4.72e-08
ENSG00000186076 \N 304715 6.15e-06 3.09e-06 6.03e-07 1.07e-06 1.56e-07 7.85e-07 1.21e-06 3.49e-07 1.4e-06 3.05e-07 1.95e-06 1.25e-06 3.49e-06 8.9e-07 4.03e-07 9.48e-07 1.12e-06 9.7e-07 6.4e-07 1.87e-07 7.96e-07 3.29e-06 2.38e-06 3.93e-07 2.62e-06 5.15e-07 6.16e-07 3.88e-07 1.66e-06 1.59e-06 8.57e-07 4.07e-08 1.7e-07 6.89e-07 6.11e-07 4.66e-07 8.07e-08 1.09e-07 8.06e-08 8.3e-08 4.4e-08 1.2e-05 5.43e-07 7.61e-09 1.27e-07 1.52e-08 1.05e-07 1.88e-09 4.99e-08