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Genes within 1Mb (chr12:93941104:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -709453 sc-eQTL 6.79e-01 -0.0361 0.0873 0.393 B L1
ENSG00000136040 PLXNC1 -207473 sc-eQTL 5.07e-01 -0.0329 0.0495 0.393 B L1
ENSG00000169372 CRADD 263729 sc-eQTL 2.74e-01 -0.0819 0.0747 0.393 B L1
ENSG00000173588 CEP83 -518884 sc-eQTL 8.51e-01 0.0118 0.0625 0.393 B L1
ENSG00000173598 NUDT4 563221 sc-eQTL 6.32e-01 0.0267 0.0557 0.393 B L1
ENSG00000177889 UBE2N 499157 sc-eQTL 5.01e-01 0.0331 0.0491 0.393 B L1
ENSG00000198015 MRPL42 473616 sc-eQTL 9.66e-01 0.00329 0.0767 0.393 B L1
ENSG00000257345 LINC02413 941886 sc-eQTL 5.06e-01 0.0508 0.0763 0.393 B L1
ENSG00000120833 SOCS2 371290 sc-eQTL 7.72e-01 0.0147 0.0508 0.393 CD4T L1
ENSG00000136040 PLXNC1 -207473 sc-eQTL 5.57e-01 0.0313 0.0533 0.393 CD4T L1
ENSG00000169372 CRADD 263729 sc-eQTL 7.38e-01 -0.0292 0.0874 0.393 CD4T L1
ENSG00000173588 CEP83 -518884 sc-eQTL 8.30e-01 0.012 0.0559 0.393 CD4T L1
ENSG00000173598 NUDT4 563221 sc-eQTL 1.96e-01 0.0652 0.0502 0.393 CD4T L1
ENSG00000177889 UBE2N 499157 sc-eQTL 2.80e-01 0.0506 0.0467 0.393 CD4T L1
ENSG00000198015 MRPL42 473616 sc-eQTL 5.56e-01 -0.048 0.0814 0.393 CD4T L1
ENSG00000057704 TMCC3 -709453 sc-eQTL 5.78e-01 0.0283 0.0507 0.393 CD8T L1
ENSG00000120833 SOCS2 371290 sc-eQTL 6.83e-01 -0.0278 0.0679 0.393 CD8T L1
ENSG00000136040 PLXNC1 -207473 sc-eQTL 2.57e-01 0.0792 0.0697 0.393 CD8T L1
ENSG00000169372 CRADD 263729 sc-eQTL 1.71e-01 0.113 0.0819 0.393 CD8T L1
ENSG00000173588 CEP83 -518884 sc-eQTL 1.21e-01 0.101 0.0649 0.393 CD8T L1
ENSG00000173598 NUDT4 563221 sc-eQTL 5.27e-02 0.0942 0.0483 0.393 CD8T L1
ENSG00000177889 UBE2N 499157 sc-eQTL 6.73e-02 0.111 0.0603 0.393 CD8T L1
ENSG00000198015 MRPL42 473616 sc-eQTL 6.52e-01 -0.0391 0.0865 0.393 CD8T L1
ENSG00000057704 TMCC3 -709453 sc-eQTL 1.46e-01 0.136 0.0935 0.396 DC L1
ENSG00000136040 PLXNC1 -207473 sc-eQTL 1.80e-01 0.113 0.0837 0.396 DC L1
ENSG00000169372 CRADD 263729 sc-eQTL 9.71e-01 -0.00345 0.095 0.396 DC L1
ENSG00000173588 CEP83 -518884 sc-eQTL 4.58e-01 -0.0556 0.0748 0.396 DC L1
ENSG00000173598 NUDT4 563221 sc-eQTL 3.51e-01 -0.0728 0.0779 0.396 DC L1
ENSG00000177889 UBE2N 499157 sc-eQTL 7.83e-01 -0.0218 0.0788 0.396 DC L1
ENSG00000198015 MRPL42 473616 sc-eQTL 4.12e-01 -0.0743 0.0904 0.396 DC L1
ENSG00000057704 TMCC3 -709453 sc-eQTL 4.89e-01 -0.0442 0.0638 0.393 Mono L1
ENSG00000136040 PLXNC1 -207473 sc-eQTL 4.42e-01 0.0408 0.0529 0.393 Mono L1
ENSG00000169372 CRADD 263729 sc-eQTL 7.27e-02 -0.175 0.0968 0.393 Mono L1
ENSG00000173588 CEP83 -518884 sc-eQTL 9.83e-01 0.00168 0.0783 0.393 Mono L1
ENSG00000173598 NUDT4 563221 sc-eQTL 1.59e-01 0.0946 0.0669 0.393 Mono L1
ENSG00000177889 UBE2N 499157 sc-eQTL 9.80e-01 0.00129 0.0505 0.393 Mono L1
ENSG00000198015 MRPL42 473616 sc-eQTL 2.09e-02 -0.156 0.0671 0.393 Mono L1
ENSG00000057704 TMCC3 -709453 sc-eQTL 7.49e-01 -0.0248 0.0775 0.395 NK L1
ENSG00000120833 SOCS2 371290 sc-eQTL 7.20e-01 -0.0218 0.0608 0.395 NK L1
ENSG00000136040 PLXNC1 -207473 sc-eQTL 5.33e-01 0.0396 0.0634 0.395 NK L1
ENSG00000169372 CRADD 263729 sc-eQTL 6.13e-01 0.0461 0.0911 0.395 NK L1
ENSG00000173588 CEP83 -518884 sc-eQTL 2.92e-01 0.076 0.0719 0.395 NK L1
ENSG00000173598 NUDT4 563221 sc-eQTL 1.30e-01 0.0891 0.0586 0.395 NK L1
ENSG00000177889 UBE2N 499157 sc-eQTL 1.05e-02 0.148 0.0575 0.395 NK L1
ENSG00000198015 MRPL42 473616 sc-eQTL 7.38e-01 -0.0279 0.0834 0.395 NK L1
ENSG00000246985 SOCS2-AS1 369336 sc-eQTL 3.65e-01 -0.086 0.0948 0.395 NK L1
ENSG00000057704 TMCC3 -709453 sc-eQTL 2.91e-01 0.0836 0.079 0.393 Other_T L1
ENSG00000120833 SOCS2 371290 sc-eQTL 6.28e-01 -0.0378 0.078 0.393 Other_T L1
ENSG00000136040 PLXNC1 -207473 sc-eQTL 1.27e-01 0.112 0.0728 0.393 Other_T L1
ENSG00000169372 CRADD 263729 sc-eQTL 8.10e-01 0.0213 0.0886 0.393 Other_T L1
ENSG00000173588 CEP83 -518884 sc-eQTL 3.85e-01 0.0716 0.0823 0.393 Other_T L1
ENSG00000173598 NUDT4 563221 sc-eQTL 4.34e-01 -0.0495 0.0632 0.393 Other_T L1
ENSG00000177889 UBE2N 499157 sc-eQTL 1.76e-01 0.0793 0.0584 0.393 Other_T L1
ENSG00000198015 MRPL42 473616 sc-eQTL 4.97e-01 0.0472 0.0693 0.393 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -709453 sc-eQTL 7.92e-01 -0.0241 0.0912 0.403 B_Activated L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 4.73e-01 -0.0619 0.0861 0.403 B_Activated L2
ENSG00000169372 CRADD 263729 sc-eQTL 6.17e-01 -0.0506 0.101 0.403 B_Activated L2
ENSG00000173588 CEP83 -518884 sc-eQTL 5.57e-01 0.0631 0.107 0.403 B_Activated L2
ENSG00000173598 NUDT4 563221 sc-eQTL 8.00e-01 0.0229 0.09 0.403 B_Activated L2
ENSG00000177889 UBE2N 499157 sc-eQTL 4.48e-01 -0.0848 0.112 0.403 B_Activated L2
ENSG00000198015 MRPL42 473616 sc-eQTL 3.60e-01 -0.0991 0.108 0.403 B_Activated L2
ENSG00000257345 LINC02413 941886 sc-eQTL 2.85e-01 0.112 0.105 0.403 B_Activated L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 7.88e-01 0.0242 0.0902 0.393 B_Intermediate L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 3.70e-01 0.0681 0.0758 0.393 B_Intermediate L2
ENSG00000169372 CRADD 263729 sc-eQTL 8.63e-01 -0.0156 0.0902 0.393 B_Intermediate L2
ENSG00000173588 CEP83 -518884 sc-eQTL 5.47e-01 -0.0507 0.0841 0.393 B_Intermediate L2
ENSG00000173598 NUDT4 563221 sc-eQTL 3.95e-01 0.064 0.0751 0.393 B_Intermediate L2
ENSG00000177889 UBE2N 499157 sc-eQTL 1.21e-01 0.118 0.0762 0.393 B_Intermediate L2
ENSG00000198015 MRPL42 473616 sc-eQTL 8.49e-01 -0.0177 0.0933 0.393 B_Intermediate L2
ENSG00000257345 LINC02413 941886 sc-eQTL 7.60e-01 -0.0281 0.0921 0.393 B_Intermediate L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 4.12e-02 -0.195 0.0948 0.394 B_Memory L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 4.17e-01 -0.0601 0.074 0.394 B_Memory L2
ENSG00000169372 CRADD 263729 sc-eQTL 1.67e-01 -0.134 0.0965 0.394 B_Memory L2
ENSG00000173588 CEP83 -518884 sc-eQTL 1.67e-01 0.119 0.086 0.394 B_Memory L2
ENSG00000173598 NUDT4 563221 sc-eQTL 8.14e-01 0.0164 0.0694 0.394 B_Memory L2
ENSG00000177889 UBE2N 499157 sc-eQTL 2.26e-01 0.0751 0.0619 0.394 B_Memory L2
ENSG00000198015 MRPL42 473616 sc-eQTL 5.48e-01 -0.0555 0.0922 0.394 B_Memory L2
ENSG00000257345 LINC02413 941886 sc-eQTL 6.01e-02 0.173 0.0915 0.394 B_Memory L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 1.24e-01 0.138 0.0892 0.393 B_Naive1 L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 5.49e-01 -0.0457 0.0761 0.393 B_Naive1 L2
ENSG00000169372 CRADD 263729 sc-eQTL 9.57e-02 -0.159 0.095 0.393 B_Naive1 L2
ENSG00000173588 CEP83 -518884 sc-eQTL 2.84e-01 0.0842 0.0785 0.393 B_Naive1 L2
ENSG00000173598 NUDT4 563221 sc-eQTL 7.29e-01 0.0238 0.0685 0.393 B_Naive1 L2
ENSG00000177889 UBE2N 499157 sc-eQTL 5.17e-01 -0.0477 0.0736 0.393 B_Naive1 L2
ENSG00000198015 MRPL42 473616 sc-eQTL 6.71e-01 -0.0362 0.085 0.393 B_Naive1 L2
ENSG00000257345 LINC02413 941886 sc-eQTL 6.31e-01 0.0433 0.0901 0.393 B_Naive1 L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 7.37e-02 -0.157 0.0873 0.395 B_Naive2 L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 2.79e-01 -0.0891 0.0821 0.395 B_Naive2 L2
ENSG00000169372 CRADD 263729 sc-eQTL 5.71e-01 0.0526 0.0927 0.395 B_Naive2 L2
ENSG00000173588 CEP83 -518884 sc-eQTL 4.06e-01 -0.0722 0.0867 0.395 B_Naive2 L2
ENSG00000173598 NUDT4 563221 sc-eQTL 7.01e-01 -0.0294 0.0766 0.395 B_Naive2 L2
ENSG00000177889 UBE2N 499157 sc-eQTL 7.97e-01 -0.0193 0.075 0.395 B_Naive2 L2
ENSG00000198015 MRPL42 473616 sc-eQTL 7.36e-01 0.0328 0.0972 0.395 B_Naive2 L2
ENSG00000257345 LINC02413 941886 sc-eQTL 1.18e-01 0.145 0.0928 0.395 B_Naive2 L2
ENSG00000120833 SOCS2 371290 sc-eQTL 1.88e-01 -0.124 0.0935 0.4 CD4_CTL L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 4.86e-01 0.0623 0.0893 0.4 CD4_CTL L2
ENSG00000169372 CRADD 263729 sc-eQTL 6.11e-02 0.169 0.09 0.4 CD4_CTL L2
ENSG00000173588 CEP83 -518884 sc-eQTL 9.61e-01 0.00445 0.0915 0.4 CD4_CTL L2
ENSG00000173598 NUDT4 563221 sc-eQTL 5.09e-02 0.173 0.0881 0.4 CD4_CTL L2
ENSG00000177889 UBE2N 499157 sc-eQTL 9.11e-02 0.153 0.0901 0.4 CD4_CTL L2
ENSG00000198015 MRPL42 473616 sc-eQTL 7.72e-01 0.0295 0.101 0.4 CD4_CTL L2
ENSG00000120833 SOCS2 371290 sc-eQTL 3.82e-01 0.0461 0.0526 0.393 CD4_Naive L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 5.99e-01 0.0314 0.0596 0.393 CD4_Naive L2
ENSG00000169372 CRADD 263729 sc-eQTL 1.94e-01 -0.118 0.0907 0.393 CD4_Naive L2
ENSG00000173588 CEP83 -518884 sc-eQTL 8.77e-01 0.01 0.0645 0.393 CD4_Naive L2
ENSG00000173598 NUDT4 563221 sc-eQTL 1.14e-01 0.0843 0.0532 0.393 CD4_Naive L2
ENSG00000177889 UBE2N 499157 sc-eQTL 6.86e-01 0.0208 0.0513 0.393 CD4_Naive L2
ENSG00000198015 MRPL42 473616 sc-eQTL 6.00e-01 -0.0453 0.0861 0.393 CD4_Naive L2
ENSG00000120833 SOCS2 371290 sc-eQTL 8.52e-01 -0.0112 0.06 0.393 CD4_TCM L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 4.67e-01 0.0519 0.0712 0.393 CD4_TCM L2
ENSG00000169372 CRADD 263729 sc-eQTL 2.56e-01 0.109 0.0959 0.393 CD4_TCM L2
ENSG00000173588 CEP83 -518884 sc-eQTL 3.11e-01 0.077 0.0758 0.393 CD4_TCM L2
ENSG00000173598 NUDT4 563221 sc-eQTL 8.16e-01 -0.0141 0.0603 0.393 CD4_TCM L2
ENSG00000177889 UBE2N 499157 sc-eQTL 2.19e-01 0.0712 0.0578 0.393 CD4_TCM L2
ENSG00000198015 MRPL42 473616 sc-eQTL 6.51e-01 -0.0401 0.0885 0.393 CD4_TCM L2
ENSG00000120833 SOCS2 371290 sc-eQTL 5.07e-01 -0.0431 0.0649 0.393 CD4_TEM L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 9.06e-01 -0.00925 0.0778 0.393 CD4_TEM L2
ENSG00000169372 CRADD 263729 sc-eQTL 1.82e-01 -0.128 0.0954 0.393 CD4_TEM L2
ENSG00000173588 CEP83 -518884 sc-eQTL 2.40e-01 -0.103 0.0871 0.393 CD4_TEM L2
ENSG00000173598 NUDT4 563221 sc-eQTL 4.73e-01 0.0542 0.0755 0.393 CD4_TEM L2
ENSG00000177889 UBE2N 499157 sc-eQTL 8.03e-03 0.204 0.0764 0.393 CD4_TEM L2
ENSG00000198015 MRPL42 473616 sc-eQTL 5.53e-02 -0.163 0.0846 0.393 CD4_TEM L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 2.54e-01 0.0863 0.0755 0.393 CD8_CTL L2
ENSG00000120833 SOCS2 371290 sc-eQTL 4.29e-01 0.0606 0.0765 0.393 CD8_CTL L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 7.70e-01 -0.0227 0.0777 0.393 CD8_CTL L2
ENSG00000169372 CRADD 263729 sc-eQTL 6.18e-02 0.176 0.0936 0.393 CD8_CTL L2
ENSG00000173588 CEP83 -518884 sc-eQTL 2.87e-02 0.186 0.0846 0.393 CD8_CTL L2
ENSG00000173598 NUDT4 563221 sc-eQTL 2.57e-01 0.0792 0.0698 0.393 CD8_CTL L2
ENSG00000177889 UBE2N 499157 sc-eQTL 7.36e-01 0.0274 0.0812 0.393 CD8_CTL L2
ENSG00000198015 MRPL42 473616 sc-eQTL 5.47e-01 -0.0562 0.093 0.393 CD8_CTL L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 6.23e-01 0.0343 0.0696 0.393 CD8_Naive L2
ENSG00000120833 SOCS2 371290 sc-eQTL 1.85e-01 -0.0968 0.0727 0.393 CD8_Naive L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 2.98e-01 0.0851 0.0815 0.393 CD8_Naive L2
ENSG00000169372 CRADD 263729 sc-eQTL 8.43e-01 -0.0187 0.0945 0.393 CD8_Naive L2
ENSG00000173588 CEP83 -518884 sc-eQTL 2.18e-01 0.0969 0.0785 0.393 CD8_Naive L2
ENSG00000173598 NUDT4 563221 sc-eQTL 8.91e-02 0.111 0.065 0.393 CD8_Naive L2
ENSG00000177889 UBE2N 499157 sc-eQTL 9.49e-02 0.119 0.0709 0.393 CD8_Naive L2
ENSG00000198015 MRPL42 473616 sc-eQTL 2.61e-01 -0.102 0.0908 0.393 CD8_Naive L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 6.28e-01 0.0361 0.0744 0.394 CD8_TCM L2
ENSG00000120833 SOCS2 371290 sc-eQTL 2.98e-01 0.0863 0.0827 0.394 CD8_TCM L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 9.52e-02 0.155 0.0925 0.394 CD8_TCM L2
ENSG00000169372 CRADD 263729 sc-eQTL 6.35e-01 -0.0468 0.0984 0.394 CD8_TCM L2
ENSG00000173588 CEP83 -518884 sc-eQTL 7.70e-02 -0.169 0.0949 0.394 CD8_TCM L2
ENSG00000173598 NUDT4 563221 sc-eQTL 7.30e-01 -0.027 0.0782 0.394 CD8_TCM L2
ENSG00000177889 UBE2N 499157 sc-eQTL 4.19e-02 0.189 0.0921 0.394 CD8_TCM L2
ENSG00000198015 MRPL42 473616 sc-eQTL 6.90e-01 -0.0381 0.0953 0.394 CD8_TCM L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 6.73e-01 0.0347 0.0821 0.402 CD8_TEM L2
ENSG00000120833 SOCS2 371290 sc-eQTL 9.02e-01 -0.0108 0.0876 0.402 CD8_TEM L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 8.71e-01 0.015 0.0923 0.402 CD8_TEM L2
ENSG00000169372 CRADD 263729 sc-eQTL 1.79e-01 0.131 0.0973 0.402 CD8_TEM L2
ENSG00000173588 CEP83 -518884 sc-eQTL 1.26e-01 0.146 0.0946 0.402 CD8_TEM L2
ENSG00000173598 NUDT4 563221 sc-eQTL 9.94e-01 0.000695 0.09 0.402 CD8_TEM L2
ENSG00000177889 UBE2N 499157 sc-eQTL 9.13e-01 0.0094 0.086 0.402 CD8_TEM L2
ENSG00000198015 MRPL42 473616 sc-eQTL 2.09e-01 0.112 0.0887 0.402 CD8_TEM L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 4.07e-01 -0.0656 0.0789 0.396 MAIT L2
ENSG00000120833 SOCS2 371290 sc-eQTL 9.44e-01 0.00588 0.0841 0.396 MAIT L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 5.99e-02 0.145 0.0768 0.396 MAIT L2
ENSG00000169372 CRADD 263729 sc-eQTL 8.31e-01 0.021 0.0985 0.396 MAIT L2
ENSG00000173588 CEP83 -518884 sc-eQTL 1.50e-01 0.128 0.0883 0.396 MAIT L2
ENSG00000173598 NUDT4 563221 sc-eQTL 8.43e-01 -0.0141 0.0715 0.396 MAIT L2
ENSG00000177889 UBE2N 499157 sc-eQTL 2.74e-01 0.0959 0.0874 0.396 MAIT L2
ENSG00000198015 MRPL42 473616 sc-eQTL 3.96e-01 0.076 0.0894 0.396 MAIT L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 6.14e-01 -0.0472 0.0933 0.398 NK_CD56bright L2
ENSG00000120833 SOCS2 371290 sc-eQTL 4.02e-01 -0.0711 0.0846 0.398 NK_CD56bright L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 1.50e-01 -0.119 0.0821 0.398 NK_CD56bright L2
ENSG00000169372 CRADD 263729 sc-eQTL 8.70e-01 -0.0165 0.1 0.398 NK_CD56bright L2
ENSG00000173588 CEP83 -518884 sc-eQTL 7.82e-01 -0.0232 0.0836 0.398 NK_CD56bright L2
ENSG00000173598 NUDT4 563221 sc-eQTL 4.56e-01 0.0667 0.0893 0.398 NK_CD56bright L2
ENSG00000177889 UBE2N 499157 sc-eQTL 5.58e-01 0.0556 0.0949 0.398 NK_CD56bright L2
ENSG00000198015 MRPL42 473616 sc-eQTL 4.96e-01 -0.0645 0.0945 0.398 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 369336 sc-eQTL 4.40e-01 -0.0681 0.088 0.398 NK_CD56bright L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 7.45e-01 0.026 0.0799 0.397 NK_CD56dim L2
ENSG00000120833 SOCS2 371290 sc-eQTL 9.44e-01 -0.00482 0.0681 0.397 NK_CD56dim L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 2.74e-01 0.081 0.0739 0.397 NK_CD56dim L2
ENSG00000169372 CRADD 263729 sc-eQTL 4.15e-01 -0.0788 0.0964 0.397 NK_CD56dim L2
ENSG00000173588 CEP83 -518884 sc-eQTL 4.54e-02 0.171 0.0848 0.397 NK_CD56dim L2
ENSG00000173598 NUDT4 563221 sc-eQTL 4.42e-01 0.0527 0.0683 0.397 NK_CD56dim L2
ENSG00000177889 UBE2N 499157 sc-eQTL 1.48e-01 0.0949 0.0654 0.397 NK_CD56dim L2
ENSG00000198015 MRPL42 473616 sc-eQTL 9.15e-01 0.00967 0.091 0.397 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 369336 sc-eQTL 9.00e-01 0.0117 0.0936 0.397 NK_CD56dim L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 4.34e-01 0.0709 0.0905 0.4 NK_HLA L2
ENSG00000120833 SOCS2 371290 sc-eQTL 6.19e-01 -0.0447 0.0898 0.4 NK_HLA L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 2.42e-01 0.096 0.0818 0.4 NK_HLA L2
ENSG00000169372 CRADD 263729 sc-eQTL 7.00e-01 0.0388 0.101 0.4 NK_HLA L2
ENSG00000173588 CEP83 -518884 sc-eQTL 1.46e-01 -0.137 0.0938 0.4 NK_HLA L2
ENSG00000173598 NUDT4 563221 sc-eQTL 5.69e-01 0.0479 0.084 0.4 NK_HLA L2
ENSG00000177889 UBE2N 499157 sc-eQTL 9.61e-02 0.156 0.0935 0.4 NK_HLA L2
ENSG00000198015 MRPL42 473616 sc-eQTL 6.07e-01 0.0541 0.105 0.4 NK_HLA L2
ENSG00000246985 SOCS2-AS1 369336 sc-eQTL 4.25e-01 -0.0679 0.0848 0.4 NK_HLA L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 7.06e-01 -0.0332 0.088 0.397 NK_cytokine L2
ENSG00000120833 SOCS2 371290 sc-eQTL 4.24e-01 -0.0616 0.0768 0.397 NK_cytokine L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 7.55e-01 -0.0244 0.078 0.397 NK_cytokine L2
ENSG00000169372 CRADD 263729 sc-eQTL 3.05e-01 0.0894 0.087 0.397 NK_cytokine L2
ENSG00000173588 CEP83 -518884 sc-eQTL 7.11e-01 -0.0332 0.0896 0.397 NK_cytokine L2
ENSG00000173598 NUDT4 563221 sc-eQTL 7.06e-01 0.0259 0.0685 0.397 NK_cytokine L2
ENSG00000177889 UBE2N 499157 sc-eQTL 4.45e-01 0.0602 0.0787 0.397 NK_cytokine L2
ENSG00000198015 MRPL42 473616 sc-eQTL 5.05e-01 -0.0609 0.0912 0.397 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 369336 sc-eQTL 2.50e-01 -0.105 0.0911 0.397 NK_cytokine L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 7.43e-01 0.0339 0.103 0.374 PB L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 1.49e-01 -0.152 0.105 0.374 PB L2
ENSG00000169372 CRADD 263729 sc-eQTL 2.90e-01 0.103 0.0971 0.374 PB L2
ENSG00000173588 CEP83 -518884 sc-eQTL 5.11e-01 -0.0725 0.11 0.374 PB L2
ENSG00000173598 NUDT4 563221 sc-eQTL 9.47e-01 0.00605 0.0913 0.374 PB L2
ENSG00000177889 UBE2N 499157 sc-eQTL 7.39e-01 0.0268 0.0803 0.374 PB L2
ENSG00000198015 MRPL42 473616 sc-eQTL 9.49e-01 -0.00707 0.11 0.374 PB L2
ENSG00000257345 LINC02413 941886 sc-eQTL 2.59e-01 -0.121 0.106 0.374 PB L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 3.04e-01 0.0812 0.0788 0.391 Pro_T L2
ENSG00000120833 SOCS2 371290 sc-eQTL 3.80e-01 0.0741 0.0843 0.391 Pro_T L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 7.97e-01 0.0232 0.0899 0.391 Pro_T L2
ENSG00000169372 CRADD 263729 sc-eQTL 9.50e-01 -0.0055 0.0878 0.391 Pro_T L2
ENSG00000173588 CEP83 -518884 sc-eQTL 8.22e-01 0.02 0.089 0.391 Pro_T L2
ENSG00000173598 NUDT4 563221 sc-eQTL 6.09e-02 -0.133 0.0706 0.391 Pro_T L2
ENSG00000177889 UBE2N 499157 sc-eQTL 6.14e-01 -0.0332 0.0656 0.391 Pro_T L2
ENSG00000198015 MRPL42 473616 sc-eQTL 7.71e-01 -0.023 0.0788 0.391 Pro_T L2
ENSG00000120833 SOCS2 371290 sc-eQTL 6.91e-01 0.032 0.0806 0.393 Treg L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 8.38e-01 0.0174 0.085 0.393 Treg L2
ENSG00000169372 CRADD 263729 sc-eQTL 2.61e-01 0.11 0.0978 0.393 Treg L2
ENSG00000173588 CEP83 -518884 sc-eQTL 4.79e-01 -0.0644 0.0909 0.393 Treg L2
ENSG00000173598 NUDT4 563221 sc-eQTL 9.24e-01 0.00664 0.0695 0.393 Treg L2
ENSG00000177889 UBE2N 499157 sc-eQTL 2.84e-01 -0.0804 0.0748 0.393 Treg L2
ENSG00000198015 MRPL42 473616 sc-eQTL 6.60e-01 0.0416 0.0943 0.393 Treg L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 9.16e-01 0.0106 0.1 0.402 cDC L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 6.12e-01 0.0444 0.0875 0.402 cDC L2
ENSG00000169372 CRADD 263729 sc-eQTL 9.39e-01 0.00744 0.0968 0.402 cDC L2
ENSG00000173588 CEP83 -518884 sc-eQTL 4.18e-01 -0.0666 0.082 0.402 cDC L2
ENSG00000173598 NUDT4 563221 sc-eQTL 6.35e-01 0.0467 0.0983 0.402 cDC L2
ENSG00000177889 UBE2N 499157 sc-eQTL 7.93e-01 0.0225 0.0855 0.402 cDC L2
ENSG00000198015 MRPL42 473616 sc-eQTL 7.76e-01 0.0279 0.0981 0.402 cDC L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 4.12e-01 -0.0591 0.072 0.393 cMono_IL1B L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 1.48e-01 0.0919 0.0633 0.393 cMono_IL1B L2
ENSG00000169372 CRADD 263729 sc-eQTL 5.25e-01 -0.0602 0.0944 0.393 cMono_IL1B L2
ENSG00000173588 CEP83 -518884 sc-eQTL 3.67e-01 0.0782 0.0865 0.393 cMono_IL1B L2
ENSG00000173598 NUDT4 563221 sc-eQTL 3.01e-01 0.0716 0.0691 0.393 cMono_IL1B L2
ENSG00000177889 UBE2N 499157 sc-eQTL 5.97e-01 -0.0287 0.0542 0.393 cMono_IL1B L2
ENSG00000198015 MRPL42 473616 sc-eQTL 1.72e-01 -0.103 0.0749 0.393 cMono_IL1B L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 9.04e-01 0.00993 0.0819 0.393 cMono_S100A L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 9.67e-01 -0.00279 0.0668 0.393 cMono_S100A L2
ENSG00000169372 CRADD 263729 sc-eQTL 1.35e-01 -0.153 0.102 0.393 cMono_S100A L2
ENSG00000173588 CEP83 -518884 sc-eQTL 2.07e-01 -0.119 0.0941 0.393 cMono_S100A L2
ENSG00000173598 NUDT4 563221 sc-eQTL 5.18e-01 0.0519 0.0803 0.393 cMono_S100A L2
ENSG00000177889 UBE2N 499157 sc-eQTL 7.48e-01 0.0225 0.0699 0.393 cMono_S100A L2
ENSG00000198015 MRPL42 473616 sc-eQTL 4.91e-01 -0.0553 0.0801 0.393 cMono_S100A L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 1.29e-03 0.289 0.0879 0.418 gdT L2
ENSG00000120833 SOCS2 371290 sc-eQTL 9.69e-01 -0.00424 0.11 0.418 gdT L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 1.95e-01 -0.149 0.114 0.418 gdT L2
ENSG00000169372 CRADD 263729 sc-eQTL 1.43e-02 0.274 0.11 0.418 gdT L2
ENSG00000173588 CEP83 -518884 sc-eQTL 4.43e-01 0.0862 0.112 0.418 gdT L2
ENSG00000173598 NUDT4 563221 sc-eQTL 4.85e-01 -0.0749 0.107 0.418 gdT L2
ENSG00000177889 UBE2N 499157 sc-eQTL 9.94e-01 -0.000931 0.117 0.418 gdT L2
ENSG00000198015 MRPL42 473616 sc-eQTL 7.46e-01 0.0371 0.114 0.418 gdT L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 3.32e-01 0.0928 0.0954 0.393 intMono L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 3.65e-01 -0.0731 0.0805 0.393 intMono L2
ENSG00000169372 CRADD 263729 sc-eQTL 4.19e-01 -0.0752 0.0928 0.393 intMono L2
ENSG00000173588 CEP83 -518884 sc-eQTL 8.17e-01 0.0225 0.0972 0.393 intMono L2
ENSG00000173598 NUDT4 563221 sc-eQTL 7.18e-01 0.0306 0.0846 0.393 intMono L2
ENSG00000177889 UBE2N 499157 sc-eQTL 7.40e-01 0.0268 0.0806 0.393 intMono L2
ENSG00000198015 MRPL42 473616 sc-eQTL 9.31e-01 -0.0075 0.0868 0.393 intMono L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 2.44e-01 -0.101 0.0861 0.396 ncMono L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 6.40e-01 0.0278 0.0595 0.396 ncMono L2
ENSG00000169372 CRADD 263729 sc-eQTL 4.83e-02 -0.182 0.0918 0.396 ncMono L2
ENSG00000173588 CEP83 -518884 sc-eQTL 1.42e-01 0.136 0.0926 0.396 ncMono L2
ENSG00000173598 NUDT4 563221 sc-eQTL 8.23e-01 -0.0182 0.0814 0.396 ncMono L2
ENSG00000177889 UBE2N 499157 sc-eQTL 5.03e-01 -0.0532 0.0793 0.396 ncMono L2
ENSG00000198015 MRPL42 473616 sc-eQTL 4.83e-02 -0.162 0.0815 0.396 ncMono L2
ENSG00000057704 TMCC3 -709453 sc-eQTL 5.02e-01 0.0671 0.0997 0.401 pDC L2
ENSG00000136040 PLXNC1 -207473 sc-eQTL 3.93e-02 0.204 0.098 0.401 pDC L2
ENSG00000169372 CRADD 263729 sc-eQTL 9.35e-01 -0.00818 0.101 0.401 pDC L2
ENSG00000173588 CEP83 -518884 sc-eQTL 3.43e-01 0.101 0.107 0.401 pDC L2
ENSG00000173598 NUDT4 563221 sc-eQTL 4.32e-01 -0.068 0.0863 0.401 pDC L2
ENSG00000177889 UBE2N 499157 sc-eQTL 1.40e-01 -0.151 0.102 0.401 pDC L2
ENSG00000198015 MRPL42 473616 sc-eQTL 6.60e-01 -0.0467 0.106 0.401 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -709453 sc-eQTL 6.92e-01 0.0373 0.094 0.393 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -207473 sc-eQTL 7.87e-01 -0.0154 0.0569 0.393 B_Memory LOneK1K
ENSG00000169372 CRADD 263729 sc-eQTL 2.37e-01 -0.114 0.0965 0.393 B_Memory LOneK1K
ENSG00000173588 CEP83 -518884 sc-eQTL 9.39e-01 0.00606 0.0794 0.393 B_Memory LOneK1K
ENSG00000173598 NUDT4 563221 sc-eQTL 7.25e-01 0.0202 0.0572 0.393 B_Memory LOneK1K
ENSG00000177889 UBE2N 499157 sc-eQTL 9.99e-02 0.0857 0.0518 0.393 B_Memory LOneK1K
ENSG00000198015 MRPL42 473616 sc-eQTL 8.03e-01 -0.0212 0.085 0.393 B_Memory LOneK1K
ENSG00000257345 LINC02413 941886 sc-eQTL 6.97e-01 0.0345 0.0886 0.393 B_Memory LOneK1K
ENSG00000057704 TMCC3 -709453 sc-eQTL 9.31e-01 -0.00743 0.0855 0.393 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -207473 sc-eQTL 1.95e-01 -0.0899 0.0691 0.393 B_Naive LOneK1K
ENSG00000169372 CRADD 263729 sc-eQTL 3.88e-01 -0.0794 0.0919 0.393 B_Naive LOneK1K
ENSG00000173588 CEP83 -518884 sc-eQTL 5.77e-01 0.0404 0.0723 0.393 B_Naive LOneK1K
ENSG00000173598 NUDT4 563221 sc-eQTL 9.63e-01 0.00308 0.0672 0.393 B_Naive LOneK1K
ENSG00000177889 UBE2N 499157 sc-eQTL 6.18e-01 -0.0344 0.0689 0.393 B_Naive LOneK1K
ENSG00000198015 MRPL42 473616 sc-eQTL 6.87e-01 -0.0342 0.0848 0.393 B_Naive LOneK1K
ENSG00000257345 LINC02413 941886 sc-eQTL 3.98e-01 0.0738 0.087 0.393 B_Naive LOneK1K
ENSG00000057704 TMCC3 -709453 sc-eQTL 8.43e-01 -0.0131 0.066 0.393 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -207473 sc-eQTL 3.05e-01 0.0601 0.0584 0.393 CD14_Mono LOneK1K
ENSG00000169372 CRADD 263729 sc-eQTL 1.76e-01 -0.128 0.094 0.393 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -518884 sc-eQTL 8.88e-01 -0.0113 0.0798 0.393 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 563221 sc-eQTL 8.20e-02 0.117 0.0671 0.393 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 499157 sc-eQTL 7.19e-01 0.0183 0.0509 0.393 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 473616 sc-eQTL 6.31e-02 -0.131 0.07 0.393 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 -709453 sc-eQTL 8.30e-01 -0.0188 0.0875 0.392 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -207473 sc-eQTL 8.10e-01 -0.0135 0.0558 0.392 CD16_Mono LOneK1K
ENSG00000169372 CRADD 263729 sc-eQTL 5.46e-02 -0.193 0.1 0.392 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -518884 sc-eQTL 6.56e-01 0.0414 0.0927 0.392 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 563221 sc-eQTL 5.54e-01 -0.0447 0.0754 0.392 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 499157 sc-eQTL 3.63e-01 -0.0688 0.0754 0.392 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 473616 sc-eQTL 8.98e-02 -0.135 0.0792 0.392 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 -709453 sc-eQTL 9.96e-01 -0.00042 0.0792 0.397 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 371290 sc-eQTL 4.04e-01 -0.0514 0.0615 0.397 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -207473 sc-eQTL 1.95e-01 0.0871 0.0671 0.397 NK_CD56dim LOneK1K
ENSG00000169372 CRADD 263729 sc-eQTL 8.27e-01 0.0208 0.0951 0.397 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -518884 sc-eQTL 2.03e-01 0.0963 0.0754 0.397 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 563221 sc-eQTL 2.08e-01 0.0761 0.0602 0.397 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 499157 sc-eQTL 1.59e-02 0.14 0.0576 0.397 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 473616 sc-eQTL 8.68e-01 -0.0145 0.0872 0.397 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 369336 sc-eQTL 3.36e-01 -0.0921 0.0956 0.397 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136040 PLXNC1 -207473 eQTL 0.0297 -0.0176 0.0081 0.0 0.0 0.397

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000169372 \N 263729 1.44e-06 1.22e-06 3.06e-07 1.26e-06 3.79e-07 6.06e-07 1.49e-06 3.99e-07 1.68e-06 6.2e-07 2.03e-06 9.12e-07 2.51e-06 2.79e-07 4.96e-07 9.92e-07 9.31e-07 9.7e-07 7.14e-07 4.77e-07 7.8e-07 1.89e-06 1.14e-06 5.91e-07 2.28e-06 7.81e-07 1.02e-06 9.17e-07 1.62e-06 1.21e-06 8.17e-07 2.71e-07 3e-07 5.96e-07 5.46e-07 5.08e-07 7.4e-07 2.94e-07 4.57e-07 2.8e-07 3.67e-07 1.58e-06 1.93e-07 4.23e-08 3.17e-07 2.33e-07 2.26e-07 9.26e-08 1.83e-07