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Genes within 1Mb (chr12:93938373:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -712184 sc-eQTL 6.28e-01 0.0439 0.0904 0.538 B L1
ENSG00000136040 PLXNC1 -210204 sc-eQTL 7.95e-01 0.0134 0.0513 0.538 B L1
ENSG00000169372 CRADD 260998 sc-eQTL 1.06e-01 0.125 0.0771 0.538 B L1
ENSG00000173588 CEP83 -521615 sc-eQTL 4.03e-01 0.0541 0.0646 0.538 B L1
ENSG00000173598 NUDT4 560490 sc-eQTL 5.64e-01 -0.0333 0.0577 0.538 B L1
ENSG00000177889 UBE2N 496426 sc-eQTL 7.35e-01 -0.0172 0.0509 0.538 B L1
ENSG00000198015 MRPL42 470885 sc-eQTL 7.73e-01 -0.0229 0.0794 0.538 B L1
ENSG00000257345 LINC02413 939155 sc-eQTL 3.73e-01 0.0705 0.0789 0.538 B L1
ENSG00000120833 SOCS2 368559 sc-eQTL 1.40e-01 -0.0768 0.0519 0.538 CD4T L1
ENSG00000136040 PLXNC1 -210204 sc-eQTL 4.80e-01 -0.0386 0.0547 0.538 CD4T L1
ENSG00000169372 CRADD 260998 sc-eQTL 4.91e-01 0.0617 0.0896 0.538 CD4T L1
ENSG00000173588 CEP83 -521615 sc-eQTL 9.34e-01 0.00478 0.0573 0.538 CD4T L1
ENSG00000173598 NUDT4 560490 sc-eQTL 8.21e-02 -0.0898 0.0514 0.538 CD4T L1
ENSG00000177889 UBE2N 496426 sc-eQTL 9.44e-01 -0.00341 0.048 0.538 CD4T L1
ENSG00000198015 MRPL42 470885 sc-eQTL 5.96e-01 0.0444 0.0835 0.538 CD4T L1
ENSG00000057704 TMCC3 -712184 sc-eQTL 6.24e-01 -0.0254 0.0518 0.538 CD8T L1
ENSG00000120833 SOCS2 368559 sc-eQTL 3.85e-01 0.0603 0.0692 0.538 CD8T L1
ENSG00000136040 PLXNC1 -210204 sc-eQTL 2.25e-01 -0.0866 0.0712 0.538 CD8T L1
ENSG00000169372 CRADD 260998 sc-eQTL 6.45e-01 0.0387 0.084 0.538 CD8T L1
ENSG00000173588 CEP83 -521615 sc-eQTL 1.28e-01 -0.101 0.0663 0.538 CD8T L1
ENSG00000173598 NUDT4 560490 sc-eQTL 1.09e-01 -0.0796 0.0495 0.538 CD8T L1
ENSG00000177889 UBE2N 496426 sc-eQTL 3.60e-01 -0.0568 0.0619 0.538 CD8T L1
ENSG00000198015 MRPL42 470885 sc-eQTL 4.93e-01 0.0607 0.0883 0.538 CD8T L1
ENSG00000057704 TMCC3 -712184 sc-eQTL 2.07e-01 -0.121 0.0959 0.538 DC L1
ENSG00000136040 PLXNC1 -210204 sc-eQTL 2.36e-01 -0.102 0.0859 0.538 DC L1
ENSG00000169372 CRADD 260998 sc-eQTL 2.51e-01 0.112 0.097 0.538 DC L1
ENSG00000173588 CEP83 -521615 sc-eQTL 7.53e-01 0.0242 0.0767 0.538 DC L1
ENSG00000173598 NUDT4 560490 sc-eQTL 5.27e-01 0.0506 0.0799 0.538 DC L1
ENSG00000177889 UBE2N 496426 sc-eQTL 9.08e-01 0.00934 0.0808 0.538 DC L1
ENSG00000198015 MRPL42 470885 sc-eQTL 2.50e-01 0.107 0.0925 0.538 DC L1
ENSG00000057704 TMCC3 -712184 sc-eQTL 6.35e-01 0.0313 0.066 0.538 Mono L1
ENSG00000136040 PLXNC1 -210204 sc-eQTL 5.06e-01 -0.0365 0.0547 0.538 Mono L1
ENSG00000169372 CRADD 260998 sc-eQTL 1.88e-01 0.133 0.1 0.538 Mono L1
ENSG00000173588 CEP83 -521615 sc-eQTL 2.47e-01 0.0937 0.0806 0.538 Mono L1
ENSG00000173598 NUDT4 560490 sc-eQTL 1.52e-01 -0.0994 0.0691 0.538 Mono L1
ENSG00000177889 UBE2N 496426 sc-eQTL 4.70e-01 -0.0377 0.0521 0.538 Mono L1
ENSG00000198015 MRPL42 470885 sc-eQTL 6.39e-02 0.13 0.0696 0.538 Mono L1
ENSG00000057704 TMCC3 -712184 sc-eQTL 9.39e-01 0.00605 0.079 0.536 NK L1
ENSG00000120833 SOCS2 368559 sc-eQTL 3.25e-01 0.0609 0.0618 0.536 NK L1
ENSG00000136040 PLXNC1 -210204 sc-eQTL 4.89e-01 -0.0447 0.0646 0.536 NK L1
ENSG00000169372 CRADD 260998 sc-eQTL 3.97e-01 -0.0786 0.0927 0.536 NK L1
ENSG00000173588 CEP83 -521615 sc-eQTL 1.35e-01 -0.11 0.0731 0.536 NK L1
ENSG00000173598 NUDT4 560490 sc-eQTL 4.87e-02 -0.118 0.0595 0.536 NK L1
ENSG00000177889 UBE2N 496426 sc-eQTL 1.46e-01 -0.0863 0.0591 0.536 NK L1
ENSG00000198015 MRPL42 470885 sc-eQTL 3.38e-01 0.0813 0.0847 0.536 NK L1
ENSG00000246985 SOCS2-AS1 366605 sc-eQTL 5.15e-02 0.188 0.0959 0.536 NK L1
ENSG00000057704 TMCC3 -712184 sc-eQTL 1.90e-01 -0.106 0.0808 0.538 Other_T L1
ENSG00000120833 SOCS2 368559 sc-eQTL 7.94e-01 0.0209 0.08 0.538 Other_T L1
ENSG00000136040 PLXNC1 -210204 sc-eQTL 2.45e-01 -0.0873 0.0748 0.538 Other_T L1
ENSG00000169372 CRADD 260998 sc-eQTL 2.50e-01 -0.104 0.0905 0.538 Other_T L1
ENSG00000173588 CEP83 -521615 sc-eQTL 2.40e-01 -0.0992 0.0842 0.538 Other_T L1
ENSG00000173598 NUDT4 560490 sc-eQTL 9.80e-01 -0.00163 0.0648 0.538 Other_T L1
ENSG00000177889 UBE2N 496426 sc-eQTL 1.89e-01 -0.0789 0.0598 0.538 Other_T L1
ENSG00000198015 MRPL42 470885 sc-eQTL 8.43e-01 -0.0141 0.0711 0.538 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -712184 sc-eQTL 8.16e-01 -0.0207 0.0887 0.533 B_Activated L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 6.37e-01 0.0396 0.0838 0.533 B_Activated L2
ENSG00000169372 CRADD 260998 sc-eQTL 1.96e-01 0.127 0.0979 0.533 B_Activated L2
ENSG00000173588 CEP83 -521615 sc-eQTL 9.71e-01 -0.00373 0.104 0.533 B_Activated L2
ENSG00000173598 NUDT4 560490 sc-eQTL 9.55e-01 0.00494 0.0876 0.533 B_Activated L2
ENSG00000177889 UBE2N 496426 sc-eQTL 7.26e-01 0.0381 0.109 0.533 B_Activated L2
ENSG00000198015 MRPL42 470885 sc-eQTL 9.26e-01 -0.0098 0.105 0.533 B_Activated L2
ENSG00000257345 LINC02413 939155 sc-eQTL 6.56e-01 -0.0455 0.102 0.533 B_Activated L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 9.33e-01 -0.00773 0.0918 0.539 B_Intermediate L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 7.64e-01 -0.0232 0.0773 0.539 B_Intermediate L2
ENSG00000169372 CRADD 260998 sc-eQTL 9.05e-01 -0.011 0.0918 0.539 B_Intermediate L2
ENSG00000173588 CEP83 -521615 sc-eQTL 2.56e-01 0.0972 0.0854 0.539 B_Intermediate L2
ENSG00000173598 NUDT4 560490 sc-eQTL 5.39e-01 -0.0471 0.0765 0.539 B_Intermediate L2
ENSG00000177889 UBE2N 496426 sc-eQTL 9.11e-01 -0.00869 0.078 0.539 B_Intermediate L2
ENSG00000198015 MRPL42 470885 sc-eQTL 4.49e-01 0.0719 0.0949 0.539 B_Intermediate L2
ENSG00000257345 LINC02413 939155 sc-eQTL 9.45e-01 0.00642 0.0937 0.539 B_Intermediate L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 4.06e-02 0.198 0.0959 0.537 B_Memory L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 4.56e-01 0.0559 0.0749 0.537 B_Memory L2
ENSG00000169372 CRADD 260998 sc-eQTL 4.25e-01 0.0783 0.098 0.537 B_Memory L2
ENSG00000173588 CEP83 -521615 sc-eQTL 1.13e-01 -0.138 0.087 0.537 B_Memory L2
ENSG00000173598 NUDT4 560490 sc-eQTL 8.92e-01 -0.00953 0.0703 0.537 B_Memory L2
ENSG00000177889 UBE2N 496426 sc-eQTL 2.24e-01 -0.0765 0.0627 0.537 B_Memory L2
ENSG00000198015 MRPL42 470885 sc-eQTL 8.84e-01 0.0136 0.0934 0.537 B_Memory L2
ENSG00000257345 LINC02413 939155 sc-eQTL 2.94e-01 -0.0981 0.0931 0.537 B_Memory L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 1.74e-01 -0.124 0.0907 0.538 B_Naive1 L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 4.69e-01 0.0561 0.0773 0.538 B_Naive1 L2
ENSG00000169372 CRADD 260998 sc-eQTL 1.20e-01 0.151 0.0966 0.538 B_Naive1 L2
ENSG00000173588 CEP83 -521615 sc-eQTL 8.80e-01 0.012 0.08 0.538 B_Naive1 L2
ENSG00000173598 NUDT4 560490 sc-eQTL 6.53e-01 -0.0313 0.0695 0.538 B_Naive1 L2
ENSG00000177889 UBE2N 496426 sc-eQTL 4.11e-01 0.0616 0.0747 0.538 B_Naive1 L2
ENSG00000198015 MRPL42 470885 sc-eQTL 6.77e-01 0.0361 0.0863 0.538 B_Naive1 L2
ENSG00000257345 LINC02413 939155 sc-eQTL 5.25e-01 0.0582 0.0915 0.538 B_Naive1 L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 7.32e-02 0.16 0.0888 0.536 B_Naive2 L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 8.44e-01 0.0165 0.0837 0.536 B_Naive2 L2
ENSG00000169372 CRADD 260998 sc-eQTL 7.50e-01 0.03 0.0943 0.536 B_Naive2 L2
ENSG00000173588 CEP83 -521615 sc-eQTL 4.44e-01 0.0677 0.0882 0.536 B_Naive2 L2
ENSG00000173598 NUDT4 560490 sc-eQTL 3.20e-01 0.0775 0.0778 0.536 B_Naive2 L2
ENSG00000177889 UBE2N 496426 sc-eQTL 8.55e-01 -0.014 0.0763 0.536 B_Naive2 L2
ENSG00000198015 MRPL42 470885 sc-eQTL 5.96e-01 -0.0525 0.0988 0.536 B_Naive2 L2
ENSG00000257345 LINC02413 939155 sc-eQTL 5.38e-01 -0.0586 0.0948 0.536 B_Naive2 L2
ENSG00000120833 SOCS2 368559 sc-eQTL 8.23e-01 0.0216 0.0965 0.534 CD4_CTL L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 5.61e-01 -0.0536 0.0919 0.534 CD4_CTL L2
ENSG00000169372 CRADD 260998 sc-eQTL 6.90e-01 -0.0372 0.0933 0.534 CD4_CTL L2
ENSG00000173588 CEP83 -521615 sc-eQTL 6.07e-01 -0.0485 0.094 0.534 CD4_CTL L2
ENSG00000173598 NUDT4 560490 sc-eQTL 1.15e-01 -0.144 0.0909 0.534 CD4_CTL L2
ENSG00000177889 UBE2N 496426 sc-eQTL 2.22e-01 -0.114 0.093 0.534 CD4_CTL L2
ENSG00000198015 MRPL42 470885 sc-eQTL 5.50e-01 -0.0624 0.104 0.534 CD4_CTL L2
ENSG00000120833 SOCS2 368559 sc-eQTL 2.37e-02 -0.121 0.0533 0.538 CD4_Naive L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 4.68e-01 -0.0442 0.0609 0.538 CD4_Naive L2
ENSG00000169372 CRADD 260998 sc-eQTL 5.76e-02 0.176 0.0923 0.538 CD4_Naive L2
ENSG00000173588 CEP83 -521615 sc-eQTL 9.96e-01 0.000303 0.0659 0.538 CD4_Naive L2
ENSG00000173598 NUDT4 560490 sc-eQTL 7.29e-02 -0.0978 0.0543 0.538 CD4_Naive L2
ENSG00000177889 UBE2N 496426 sc-eQTL 3.47e-01 0.0493 0.0524 0.538 CD4_Naive L2
ENSG00000198015 MRPL42 470885 sc-eQTL 7.26e-01 0.0309 0.0881 0.538 CD4_Naive L2
ENSG00000120833 SOCS2 368559 sc-eQTL 6.63e-01 0.0267 0.0612 0.538 CD4_TCM L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 8.41e-01 0.0146 0.0727 0.538 CD4_TCM L2
ENSG00000169372 CRADD 260998 sc-eQTL 2.65e-01 -0.109 0.0978 0.538 CD4_TCM L2
ENSG00000173588 CEP83 -521615 sc-eQTL 5.77e-01 -0.0432 0.0774 0.538 CD4_TCM L2
ENSG00000173598 NUDT4 560490 sc-eQTL 4.62e-01 -0.0452 0.0614 0.538 CD4_TCM L2
ENSG00000177889 UBE2N 496426 sc-eQTL 8.09e-01 -0.0143 0.0591 0.538 CD4_TCM L2
ENSG00000198015 MRPL42 470885 sc-eQTL 3.30e-01 0.0879 0.09 0.538 CD4_TCM L2
ENSG00000120833 SOCS2 368559 sc-eQTL 7.70e-01 0.0193 0.0658 0.538 CD4_TEM L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 8.97e-01 0.0102 0.0788 0.538 CD4_TEM L2
ENSG00000169372 CRADD 260998 sc-eQTL 2.20e-01 0.119 0.0967 0.538 CD4_TEM L2
ENSG00000173588 CEP83 -521615 sc-eQTL 2.52e-02 0.197 0.0875 0.538 CD4_TEM L2
ENSG00000173598 NUDT4 560490 sc-eQTL 1.75e-01 -0.104 0.0762 0.538 CD4_TEM L2
ENSG00000177889 UBE2N 496426 sc-eQTL 3.29e-02 -0.167 0.0778 0.538 CD4_TEM L2
ENSG00000198015 MRPL42 470885 sc-eQTL 8.92e-02 0.147 0.0858 0.538 CD4_TEM L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 2.58e-01 -0.0882 0.0778 0.538 CD8_CTL L2
ENSG00000120833 SOCS2 368559 sc-eQTL 6.24e-01 -0.0387 0.0789 0.538 CD8_CTL L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 8.91e-01 0.011 0.0801 0.538 CD8_CTL L2
ENSG00000169372 CRADD 260998 sc-eQTL 3.02e-01 -0.1 0.0971 0.538 CD8_CTL L2
ENSG00000173588 CEP83 -521615 sc-eQTL 6.67e-03 -0.237 0.0867 0.538 CD8_CTL L2
ENSG00000173598 NUDT4 560490 sc-eQTL 1.80e-01 -0.0966 0.0718 0.538 CD8_CTL L2
ENSG00000177889 UBE2N 496426 sc-eQTL 8.63e-01 0.0144 0.0837 0.538 CD8_CTL L2
ENSG00000198015 MRPL42 470885 sc-eQTL 8.91e-01 -0.0131 0.096 0.538 CD8_CTL L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 8.97e-01 0.00919 0.0706 0.538 CD8_Naive L2
ENSG00000120833 SOCS2 368559 sc-eQTL 1.80e-01 0.0993 0.0738 0.538 CD8_Naive L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 1.94e-01 -0.108 0.0826 0.538 CD8_Naive L2
ENSG00000169372 CRADD 260998 sc-eQTL 2.15e-01 0.119 0.0956 0.538 CD8_Naive L2
ENSG00000173588 CEP83 -521615 sc-eQTL 3.50e-01 -0.0748 0.0798 0.538 CD8_Naive L2
ENSG00000173598 NUDT4 560490 sc-eQTL 8.20e-02 -0.115 0.0659 0.538 CD8_Naive L2
ENSG00000177889 UBE2N 496426 sc-eQTL 2.32e-01 -0.0864 0.0722 0.538 CD8_Naive L2
ENSG00000198015 MRPL42 470885 sc-eQTL 5.90e-02 0.174 0.0917 0.538 CD8_Naive L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 9.39e-01 -0.00577 0.0752 0.537 CD8_TCM L2
ENSG00000120833 SOCS2 368559 sc-eQTL 8.21e-01 -0.0189 0.0838 0.537 CD8_TCM L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 3.84e-02 -0.194 0.0932 0.537 CD8_TCM L2
ENSG00000169372 CRADD 260998 sc-eQTL 2.08e-01 0.125 0.0991 0.537 CD8_TCM L2
ENSG00000173588 CEP83 -521615 sc-eQTL 5.08e-02 0.188 0.0957 0.537 CD8_TCM L2
ENSG00000173598 NUDT4 560490 sc-eQTL 5.03e-01 0.053 0.079 0.537 CD8_TCM L2
ENSG00000177889 UBE2N 496426 sc-eQTL 5.77e-02 -0.178 0.0932 0.537 CD8_TCM L2
ENSG00000198015 MRPL42 470885 sc-eQTL 6.10e-01 0.0493 0.0964 0.537 CD8_TCM L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 9.43e-01 -0.00595 0.0835 0.53 CD8_TEM L2
ENSG00000120833 SOCS2 368559 sc-eQTL 3.36e-01 0.0857 0.0888 0.53 CD8_TEM L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 8.68e-01 0.0156 0.0938 0.53 CD8_TEM L2
ENSG00000169372 CRADD 260998 sc-eQTL 6.70e-01 -0.0423 0.0993 0.53 CD8_TEM L2
ENSG00000173588 CEP83 -521615 sc-eQTL 2.65e-01 -0.108 0.0964 0.53 CD8_TEM L2
ENSG00000173598 NUDT4 560490 sc-eQTL 9.31e-01 -0.00798 0.0915 0.53 CD8_TEM L2
ENSG00000177889 UBE2N 496426 sc-eQTL 4.43e-01 0.0671 0.0872 0.53 CD8_TEM L2
ENSG00000198015 MRPL42 470885 sc-eQTL 7.04e-01 -0.0345 0.0905 0.53 CD8_TEM L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 4.43e-01 0.0619 0.0805 0.539 MAIT L2
ENSG00000120833 SOCS2 368559 sc-eQTL 8.82e-01 0.0127 0.0858 0.539 MAIT L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 9.87e-02 -0.13 0.0785 0.539 MAIT L2
ENSG00000169372 CRADD 260998 sc-eQTL 8.11e-01 -0.024 0.1 0.539 MAIT L2
ENSG00000173588 CEP83 -521615 sc-eQTL 6.65e-02 -0.165 0.0897 0.539 MAIT L2
ENSG00000173598 NUDT4 560490 sc-eQTL 4.79e-01 -0.0516 0.0728 0.539 MAIT L2
ENSG00000177889 UBE2N 496426 sc-eQTL 9.64e-01 0.00408 0.0894 0.539 MAIT L2
ENSG00000198015 MRPL42 470885 sc-eQTL 3.61e-01 -0.0834 0.0911 0.539 MAIT L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 6.65e-01 -0.0413 0.0952 0.536 NK_CD56bright L2
ENSG00000120833 SOCS2 368559 sc-eQTL 4.12e-01 0.071 0.0863 0.536 NK_CD56bright L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 3.86e-01 0.073 0.084 0.536 NK_CD56bright L2
ENSG00000169372 CRADD 260998 sc-eQTL 9.34e-01 0.0085 0.102 0.536 NK_CD56bright L2
ENSG00000173588 CEP83 -521615 sc-eQTL 7.00e-01 -0.0329 0.0853 0.536 NK_CD56bright L2
ENSG00000173598 NUDT4 560490 sc-eQTL 1.08e-01 -0.146 0.0906 0.536 NK_CD56bright L2
ENSG00000177889 UBE2N 496426 sc-eQTL 8.47e-01 0.0187 0.0968 0.536 NK_CD56bright L2
ENSG00000198015 MRPL42 470885 sc-eQTL 9.91e-01 -0.00104 0.0965 0.536 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 366605 sc-eQTL 1.72e-01 0.123 0.0895 0.536 NK_CD56bright L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 5.41e-01 -0.0499 0.0814 0.534 NK_CD56dim L2
ENSG00000120833 SOCS2 368559 sc-eQTL 4.20e-01 0.0561 0.0693 0.534 NK_CD56dim L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 4.83e-01 -0.053 0.0754 0.534 NK_CD56dim L2
ENSG00000169372 CRADD 260998 sc-eQTL 9.05e-01 0.0118 0.0984 0.534 NK_CD56dim L2
ENSG00000173588 CEP83 -521615 sc-eQTL 1.98e-02 -0.202 0.0862 0.534 NK_CD56dim L2
ENSG00000173598 NUDT4 560490 sc-eQTL 2.76e-01 -0.0759 0.0695 0.534 NK_CD56dim L2
ENSG00000177889 UBE2N 496426 sc-eQTL 8.41e-01 -0.0135 0.067 0.534 NK_CD56dim L2
ENSG00000198015 MRPL42 470885 sc-eQTL 7.45e-01 0.0302 0.0928 0.534 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 366605 sc-eQTL 8.57e-01 0.0172 0.0954 0.534 NK_CD56dim L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 8.10e-01 -0.0223 0.0927 0.543 NK_HLA L2
ENSG00000120833 SOCS2 368559 sc-eQTL 5.84e-01 0.0504 0.0919 0.543 NK_HLA L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 6.82e-01 -0.0344 0.084 0.543 NK_HLA L2
ENSG00000169372 CRADD 260998 sc-eQTL 8.14e-01 -0.0243 0.103 0.543 NK_HLA L2
ENSG00000173588 CEP83 -521615 sc-eQTL 4.39e-01 0.0747 0.0963 0.543 NK_HLA L2
ENSG00000173598 NUDT4 560490 sc-eQTL 2.12e-01 -0.107 0.0857 0.543 NK_HLA L2
ENSG00000177889 UBE2N 496426 sc-eQTL 4.42e-01 -0.0742 0.0963 0.543 NK_HLA L2
ENSG00000198015 MRPL42 470885 sc-eQTL 8.11e-01 0.0257 0.108 0.543 NK_HLA L2
ENSG00000246985 SOCS2-AS1 366605 sc-eQTL 8.43e-02 0.15 0.0863 0.543 NK_HLA L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 8.82e-01 -0.0132 0.0886 0.534 NK_cytokine L2
ENSG00000120833 SOCS2 368559 sc-eQTL 2.69e-01 0.0855 0.0772 0.534 NK_cytokine L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 6.29e-01 0.0379 0.0785 0.534 NK_cytokine L2
ENSG00000169372 CRADD 260998 sc-eQTL 7.04e-01 -0.0334 0.0877 0.534 NK_cytokine L2
ENSG00000173588 CEP83 -521615 sc-eQTL 8.67e-01 -0.0151 0.0902 0.534 NK_cytokine L2
ENSG00000173598 NUDT4 560490 sc-eQTL 9.20e-01 -0.00695 0.069 0.534 NK_cytokine L2
ENSG00000177889 UBE2N 496426 sc-eQTL 6.90e-01 -0.0317 0.0793 0.534 NK_cytokine L2
ENSG00000198015 MRPL42 470885 sc-eQTL 2.99e-01 0.0955 0.0917 0.534 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 366605 sc-eQTL 8.52e-02 0.158 0.0913 0.534 NK_cytokine L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 6.42e-01 0.0491 0.105 0.574 PB L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 1.69e-01 0.148 0.107 0.574 PB L2
ENSG00000169372 CRADD 260998 sc-eQTL 3.75e-01 -0.0882 0.0991 0.574 PB L2
ENSG00000173588 CEP83 -521615 sc-eQTL 5.76e-01 0.0628 0.112 0.574 PB L2
ENSG00000173598 NUDT4 560490 sc-eQTL 9.08e-01 -0.0107 0.0929 0.574 PB L2
ENSG00000177889 UBE2N 496426 sc-eQTL 9.98e-01 -0.000157 0.0818 0.574 PB L2
ENSG00000198015 MRPL42 470885 sc-eQTL 6.58e-01 0.0499 0.112 0.574 PB L2
ENSG00000257345 LINC02413 939155 sc-eQTL 4.26e-02 0.22 0.107 0.574 PB L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 6.59e-02 -0.149 0.0808 0.539 Pro_T L2
ENSG00000120833 SOCS2 368559 sc-eQTL 2.07e-01 -0.11 0.0867 0.539 Pro_T L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 7.21e-01 -0.0331 0.0926 0.539 Pro_T L2
ENSG00000169372 CRADD 260998 sc-eQTL 8.27e-01 -0.0197 0.0905 0.539 Pro_T L2
ENSG00000173588 CEP83 -521615 sc-eQTL 4.53e-01 0.0689 0.0916 0.539 Pro_T L2
ENSG00000173598 NUDT4 560490 sc-eQTL 5.53e-01 0.0435 0.0733 0.539 Pro_T L2
ENSG00000177889 UBE2N 496426 sc-eQTL 9.31e-01 -0.00583 0.0676 0.539 Pro_T L2
ENSG00000198015 MRPL42 470885 sc-eQTL 5.71e-01 0.046 0.0812 0.539 Pro_T L2
ENSG00000120833 SOCS2 368559 sc-eQTL 9.16e-01 -0.00865 0.0818 0.538 Treg L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 8.77e-01 0.0133 0.0862 0.538 Treg L2
ENSG00000169372 CRADD 260998 sc-eQTL 3.46e-01 -0.0938 0.0993 0.538 Treg L2
ENSG00000173588 CEP83 -521615 sc-eQTL 4.09e-01 0.0763 0.0921 0.538 Treg L2
ENSG00000173598 NUDT4 560490 sc-eQTL 5.74e-01 -0.0397 0.0705 0.538 Treg L2
ENSG00000177889 UBE2N 496426 sc-eQTL 3.45e-01 0.0719 0.0759 0.538 Treg L2
ENSG00000198015 MRPL42 470885 sc-eQTL 6.15e-01 -0.0482 0.0957 0.538 Treg L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 7.28e-01 -0.0357 0.103 0.529 cDC L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 5.88e-01 -0.0487 0.0896 0.529 cDC L2
ENSG00000169372 CRADD 260998 sc-eQTL 3.31e-01 0.0964 0.0989 0.529 cDC L2
ENSG00000173588 CEP83 -521615 sc-eQTL 3.55e-01 0.0778 0.0839 0.529 cDC L2
ENSG00000173598 NUDT4 560490 sc-eQTL 5.11e-01 -0.0663 0.101 0.529 cDC L2
ENSG00000177889 UBE2N 496426 sc-eQTL 9.04e-01 0.0106 0.0876 0.529 cDC L2
ENSG00000198015 MRPL42 470885 sc-eQTL 9.97e-01 -0.000391 0.1 0.529 cDC L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 2.76e-01 0.081 0.0743 0.538 cMono_IL1B L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 1.85e-01 -0.087 0.0654 0.538 cMono_IL1B L2
ENSG00000169372 CRADD 260998 sc-eQTL 3.23e-01 0.0964 0.0974 0.538 cMono_IL1B L2
ENSG00000173588 CEP83 -521615 sc-eQTL 8.92e-01 0.0121 0.0895 0.538 cMono_IL1B L2
ENSG00000173598 NUDT4 560490 sc-eQTL 4.00e-01 -0.0603 0.0714 0.538 cMono_IL1B L2
ENSG00000177889 UBE2N 496426 sc-eQTL 5.89e-01 0.0303 0.056 0.538 cMono_IL1B L2
ENSG00000198015 MRPL42 470885 sc-eQTL 4.34e-01 0.0609 0.0776 0.538 cMono_IL1B L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 5.72e-01 -0.0476 0.0842 0.538 cMono_S100A L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 7.35e-01 0.0233 0.0687 0.538 cMono_S100A L2
ENSG00000169372 CRADD 260998 sc-eQTL 7.49e-01 0.0336 0.105 0.538 cMono_S100A L2
ENSG00000173588 CEP83 -521615 sc-eQTL 1.33e-01 0.146 0.0966 0.538 cMono_S100A L2
ENSG00000173598 NUDT4 560490 sc-eQTL 2.55e-01 -0.0941 0.0824 0.538 cMono_S100A L2
ENSG00000177889 UBE2N 496426 sc-eQTL 2.79e-01 -0.0778 0.0717 0.538 cMono_S100A L2
ENSG00000198015 MRPL42 470885 sc-eQTL 5.12e-01 0.0541 0.0824 0.538 cMono_S100A L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 3.21e-03 -0.267 0.0891 0.533 gdT L2
ENSG00000120833 SOCS2 368559 sc-eQTL 4.51e-01 0.0834 0.11 0.533 gdT L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 4.71e-02 0.229 0.114 0.533 gdT L2
ENSG00000169372 CRADD 260998 sc-eQTL 2.28e-03 -0.341 0.11 0.533 gdT L2
ENSG00000173588 CEP83 -521615 sc-eQTL 6.02e-01 -0.059 0.113 0.533 gdT L2
ENSG00000173598 NUDT4 560490 sc-eQTL 1.55e-01 0.153 0.107 0.533 gdT L2
ENSG00000177889 UBE2N 496426 sc-eQTL 6.78e-01 -0.0492 0.118 0.533 gdT L2
ENSG00000198015 MRPL42 470885 sc-eQTL 6.50e-01 0.0523 0.115 0.533 gdT L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 5.74e-01 -0.0558 0.099 0.536 intMono L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 6.76e-01 0.035 0.0835 0.536 intMono L2
ENSG00000169372 CRADD 260998 sc-eQTL 6.49e-01 0.0439 0.0962 0.536 intMono L2
ENSG00000173588 CEP83 -521615 sc-eQTL 7.39e-01 0.0336 0.101 0.536 intMono L2
ENSG00000173598 NUDT4 560490 sc-eQTL 9.69e-01 -0.00341 0.0877 0.536 intMono L2
ENSG00000177889 UBE2N 496426 sc-eQTL 9.01e-02 -0.141 0.0829 0.536 intMono L2
ENSG00000198015 MRPL42 470885 sc-eQTL 9.15e-01 0.00958 0.0899 0.536 intMono L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 3.02e-01 0.0916 0.0886 0.534 ncMono L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 7.15e-01 -0.0224 0.0612 0.534 ncMono L2
ENSG00000169372 CRADD 260998 sc-eQTL 1.32e-01 0.143 0.0947 0.534 ncMono L2
ENSG00000173588 CEP83 -521615 sc-eQTL 2.26e-01 -0.116 0.0953 0.534 ncMono L2
ENSG00000173598 NUDT4 560490 sc-eQTL 9.57e-01 0.0045 0.0837 0.534 ncMono L2
ENSG00000177889 UBE2N 496426 sc-eQTL 2.60e-01 0.0919 0.0813 0.534 ncMono L2
ENSG00000198015 MRPL42 470885 sc-eQTL 2.25e-01 0.103 0.0843 0.534 ncMono L2
ENSG00000057704 TMCC3 -712184 sc-eQTL 8.59e-01 -0.0185 0.104 0.528 pDC L2
ENSG00000136040 PLXNC1 -210204 sc-eQTL 8.76e-02 -0.177 0.103 0.528 pDC L2
ENSG00000169372 CRADD 260998 sc-eQTL 1.97e-01 0.136 0.105 0.528 pDC L2
ENSG00000173588 CEP83 -521615 sc-eQTL 2.06e-01 -0.141 0.111 0.528 pDC L2
ENSG00000173598 NUDT4 560490 sc-eQTL 7.11e-01 0.0336 0.0905 0.528 pDC L2
ENSG00000177889 UBE2N 496426 sc-eQTL 5.44e-01 0.0652 0.107 0.528 pDC L2
ENSG00000198015 MRPL42 470885 sc-eQTL 9.96e-01 -0.000522 0.111 0.528 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -712184 sc-eQTL 9.28e-01 0.00872 0.0959 0.538 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -210204 sc-eQTL 6.55e-01 0.026 0.058 0.538 B_Memory LOneK1K
ENSG00000169372 CRADD 260998 sc-eQTL 2.92e-01 0.104 0.0986 0.538 B_Memory LOneK1K
ENSG00000173588 CEP83 -521615 sc-eQTL 8.65e-01 0.0138 0.081 0.538 B_Memory LOneK1K
ENSG00000173598 NUDT4 560490 sc-eQTL 6.46e-01 -0.0269 0.0584 0.538 B_Memory LOneK1K
ENSG00000177889 UBE2N 496426 sc-eQTL 2.38e-01 -0.0628 0.0531 0.538 B_Memory LOneK1K
ENSG00000198015 MRPL42 470885 sc-eQTL 6.90e-01 0.0347 0.0867 0.538 B_Memory LOneK1K
ENSG00000257345 LINC02413 939155 sc-eQTL 8.96e-01 -0.0119 0.0904 0.538 B_Memory LOneK1K
ENSG00000057704 TMCC3 -712184 sc-eQTL 9.06e-01 0.0104 0.0874 0.538 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -210204 sc-eQTL 4.79e-01 0.0502 0.0708 0.538 B_Naive LOneK1K
ENSG00000169372 CRADD 260998 sc-eQTL 2.16e-01 0.116 0.0937 0.538 B_Naive LOneK1K
ENSG00000173588 CEP83 -521615 sc-eQTL 8.00e-01 0.0187 0.0739 0.538 B_Naive LOneK1K
ENSG00000173598 NUDT4 560490 sc-eQTL 7.53e-01 0.0216 0.0686 0.538 B_Naive LOneK1K
ENSG00000177889 UBE2N 496426 sc-eQTL 5.92e-01 0.0377 0.0703 0.538 B_Naive LOneK1K
ENSG00000198015 MRPL42 470885 sc-eQTL 9.69e-01 -0.00341 0.0866 0.538 B_Naive LOneK1K
ENSG00000257345 LINC02413 939155 sc-eQTL 4.11e-01 0.0733 0.0889 0.538 B_Naive LOneK1K
ENSG00000057704 TMCC3 -712184 sc-eQTL 8.18e-01 0.0157 0.0683 0.538 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -210204 sc-eQTL 4.23e-01 -0.0486 0.0605 0.538 CD14_Mono LOneK1K
ENSG00000169372 CRADD 260998 sc-eQTL 2.27e-01 0.118 0.0974 0.538 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -521615 sc-eQTL 2.27e-01 0.0997 0.0823 0.538 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 560490 sc-eQTL 8.34e-02 -0.121 0.0695 0.538 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 496426 sc-eQTL 3.32e-01 -0.0512 0.0526 0.538 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 470885 sc-eQTL 2.37e-01 0.0862 0.0728 0.538 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 -712184 sc-eQTL 8.49e-01 0.0171 0.0898 0.539 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -210204 sc-eQTL 7.68e-01 0.017 0.0573 0.539 CD16_Mono LOneK1K
ENSG00000169372 CRADD 260998 sc-eQTL 3.40e-01 0.0989 0.103 0.539 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -521615 sc-eQTL 9.24e-01 -0.00905 0.0952 0.539 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 560490 sc-eQTL 3.71e-01 0.0694 0.0773 0.539 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 496426 sc-eQTL 9.75e-01 0.00244 0.0775 0.539 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 470885 sc-eQTL 9.72e-02 0.135 0.0812 0.539 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 -712184 sc-eQTL 9.10e-01 -0.00909 0.0806 0.534 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 368559 sc-eQTL 1.47e-01 0.0908 0.0624 0.534 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -210204 sc-eQTL 3.80e-01 -0.0602 0.0684 0.534 NK_CD56dim LOneK1K
ENSG00000169372 CRADD 260998 sc-eQTL 6.48e-01 -0.0442 0.0968 0.534 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -521615 sc-eQTL 8.83e-02 -0.131 0.0765 0.534 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 560490 sc-eQTL 1.13e-01 -0.0973 0.0611 0.534 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 496426 sc-eQTL 2.38e-01 -0.0702 0.0593 0.534 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 470885 sc-eQTL 4.51e-01 0.067 0.0886 0.534 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 366605 sc-eQTL 7.58e-02 0.173 0.0967 0.534 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136040 PLXNC1 -210204 eQTL 0.0428 0.0164 0.00807 0.0 0.0 0.456
ENSG00000169372 CRADD 260998 eQTL 0.0442 0.0269 0.0133 0.0 0.0 0.456

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000169372 CRADD 260998 1.29e-06 1.13e-06 3.09e-07 1.2e-06 2.31e-07 5.63e-07 1.48e-06 3.26e-07 1.49e-06 6.69e-07 1.67e-06 8.93e-07 2.64e-06 8.7e-07 8.73e-07 1.01e-06 1.05e-06 1.1e-06 5.93e-07 6.26e-07 8.29e-07 1.82e-06 1.1e-06 6.51e-07 2.28e-06 6.42e-07 9.05e-07 1.1e-06 1.29e-06 1.24e-06 7.69e-07 5.93e-07 3.99e-07 1.36e-06 5.34e-07 6.6e-07 9.38e-07 3.84e-07 1.28e-06 3.48e-07 3.57e-07 1.62e-06 5.08e-07 6.48e-08 3.26e-07 3.62e-07 2.46e-07 2.41e-07 2.23e-07
ENSG00000186076 \N 296787 1.25e-06 9.15e-07 2.43e-07 6.49e-07 9.9e-08 4.35e-07 1.2e-06 2.62e-07 1.13e-06 4.66e-07 1.25e-06 6.01e-07 2.43e-06 3.24e-07 3.41e-07 9.33e-07 9.01e-07 6.85e-07 8.36e-07 5.97e-07 7.41e-07 1.22e-06 8.96e-07 6.23e-07 2.01e-06 3.17e-07 6.16e-07 8.87e-07 8.4e-07 9.49e-07 5.58e-07 3.79e-07 3.01e-07 1.23e-06 4.31e-07 5.06e-07 7.94e-07 3.34e-07 9.3e-07 2.04e-07 3.03e-07 1.09e-06 4.34e-07 1.94e-08 1.74e-07 2.45e-07 2.45e-07 2.33e-07 2.04e-07