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Genes within 1Mb (chr12:93932622:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -717935 sc-eQTL 6.94e-01 0.0352 0.0896 0.549 B L1
ENSG00000136040 PLXNC1 -215955 sc-eQTL 8.09e-01 0.0123 0.0508 0.549 B L1
ENSG00000169372 CRADD 255247 sc-eQTL 9.22e-02 0.129 0.0764 0.549 B L1
ENSG00000173588 CEP83 -527366 sc-eQTL 5.26e-01 0.0406 0.0641 0.549 B L1
ENSG00000173598 NUDT4 554739 sc-eQTL 6.43e-01 -0.0265 0.0571 0.549 B L1
ENSG00000177889 UBE2N 490675 sc-eQTL 8.62e-01 -0.00878 0.0504 0.549 B L1
ENSG00000198015 MRPL42 465134 sc-eQTL 8.50e-01 -0.0149 0.0787 0.549 B L1
ENSG00000257345 LINC02413 933404 sc-eQTL 3.55e-01 0.0724 0.0781 0.549 B L1
ENSG00000120833 SOCS2 362808 sc-eQTL 1.47e-01 -0.0749 0.0515 0.549 CD4T L1
ENSG00000136040 PLXNC1 -215955 sc-eQTL 5.00e-01 -0.0367 0.0543 0.549 CD4T L1
ENSG00000169372 CRADD 255247 sc-eQTL 2.59e-01 0.1 0.0888 0.549 CD4T L1
ENSG00000173588 CEP83 -527366 sc-eQTL 9.20e-01 0.0057 0.0569 0.549 CD4T L1
ENSG00000173598 NUDT4 554739 sc-eQTL 7.12e-02 -0.0925 0.051 0.549 CD4T L1
ENSG00000177889 UBE2N 490675 sc-eQTL 6.21e-01 -0.0236 0.0477 0.549 CD4T L1
ENSG00000198015 MRPL42 465134 sc-eQTL 6.30e-01 0.04 0.083 0.549 CD4T L1
ENSG00000057704 TMCC3 -717935 sc-eQTL 5.22e-01 -0.033 0.0514 0.549 CD8T L1
ENSG00000120833 SOCS2 362808 sc-eQTL 5.31e-01 0.0432 0.0689 0.549 CD8T L1
ENSG00000136040 PLXNC1 -215955 sc-eQTL 1.79e-01 -0.0953 0.0707 0.549 CD8T L1
ENSG00000169372 CRADD 255247 sc-eQTL 9.16e-01 0.00883 0.0835 0.549 CD8T L1
ENSG00000173588 CEP83 -527366 sc-eQTL 1.50e-01 -0.0953 0.0659 0.549 CD8T L1
ENSG00000173598 NUDT4 554739 sc-eQTL 3.90e-02 -0.102 0.049 0.549 CD8T L1
ENSG00000177889 UBE2N 490675 sc-eQTL 2.51e-01 -0.0708 0.0615 0.549 CD8T L1
ENSG00000198015 MRPL42 465134 sc-eQTL 3.52e-01 0.0817 0.0876 0.549 CD8T L1
ENSG00000057704 TMCC3 -717935 sc-eQTL 2.45e-01 -0.111 0.0951 0.55 DC L1
ENSG00000136040 PLXNC1 -215955 sc-eQTL 1.92e-01 -0.111 0.085 0.55 DC L1
ENSG00000169372 CRADD 255247 sc-eQTL 1.97e-01 0.124 0.096 0.55 DC L1
ENSG00000173588 CEP83 -527366 sc-eQTL 6.13e-01 0.0385 0.076 0.55 DC L1
ENSG00000173598 NUDT4 554739 sc-eQTL 3.75e-01 0.0703 0.0791 0.55 DC L1
ENSG00000177889 UBE2N 490675 sc-eQTL 9.55e-01 -0.00451 0.0801 0.55 DC L1
ENSG00000198015 MRPL42 465134 sc-eQTL 3.76e-01 0.0814 0.0918 0.55 DC L1
ENSG00000057704 TMCC3 -717935 sc-eQTL 5.28e-01 0.0413 0.0654 0.549 Mono L1
ENSG00000136040 PLXNC1 -215955 sc-eQTL 3.87e-01 -0.0469 0.0542 0.549 Mono L1
ENSG00000169372 CRADD 255247 sc-eQTL 1.39e-01 0.148 0.0993 0.549 Mono L1
ENSG00000173588 CEP83 -527366 sc-eQTL 3.31e-01 0.0779 0.08 0.549 Mono L1
ENSG00000173598 NUDT4 554739 sc-eQTL 2.61e-01 -0.0773 0.0687 0.549 Mono L1
ENSG00000177889 UBE2N 490675 sc-eQTL 3.27e-01 -0.0506 0.0515 0.549 Mono L1
ENSG00000198015 MRPL42 465134 sc-eQTL 1.11e-01 0.111 0.0691 0.549 Mono L1
ENSG00000057704 TMCC3 -717935 sc-eQTL 5.39e-01 0.0484 0.0786 0.547 NK L1
ENSG00000120833 SOCS2 362808 sc-eQTL 3.98e-01 0.0522 0.0616 0.547 NK L1
ENSG00000136040 PLXNC1 -215955 sc-eQTL 4.47e-01 -0.049 0.0644 0.547 NK L1
ENSG00000169372 CRADD 255247 sc-eQTL 6.98e-01 -0.036 0.0925 0.547 NK L1
ENSG00000173588 CEP83 -527366 sc-eQTL 1.50e-01 -0.105 0.0729 0.547 NK L1
ENSG00000173598 NUDT4 554739 sc-eQTL 1.32e-02 -0.147 0.059 0.547 NK L1
ENSG00000177889 UBE2N 490675 sc-eQTL 5.74e-02 -0.112 0.0587 0.547 NK L1
ENSG00000198015 MRPL42 465134 sc-eQTL 4.10e-01 0.0698 0.0845 0.547 NK L1
ENSG00000246985 SOCS2-AS1 360854 sc-eQTL 1.11e-01 0.154 0.0959 0.547 NK L1
ENSG00000057704 TMCC3 -717935 sc-eQTL 3.45e-01 -0.0764 0.0808 0.549 Other_T L1
ENSG00000120833 SOCS2 362808 sc-eQTL 8.07e-01 0.0195 0.0798 0.549 Other_T L1
ENSG00000136040 PLXNC1 -215955 sc-eQTL 9.26e-02 -0.126 0.0744 0.549 Other_T L1
ENSG00000169372 CRADD 255247 sc-eQTL 2.08e-01 -0.114 0.0902 0.549 Other_T L1
ENSG00000173588 CEP83 -527366 sc-eQTL 7.64e-02 -0.149 0.0836 0.549 Other_T L1
ENSG00000173598 NUDT4 554739 sc-eQTL 8.96e-01 0.00845 0.0647 0.549 Other_T L1
ENSG00000177889 UBE2N 490675 sc-eQTL 1.49e-01 -0.0864 0.0596 0.549 Other_T L1
ENSG00000198015 MRPL42 465134 sc-eQTL 7.73e-01 -0.0205 0.0709 0.549 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -717935 sc-eQTL 7.69e-01 -0.0262 0.0888 0.546 B_Activated L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 8.11e-01 0.0201 0.0839 0.546 B_Activated L2
ENSG00000169372 CRADD 255247 sc-eQTL 2.50e-01 0.113 0.0981 0.546 B_Activated L2
ENSG00000173588 CEP83 -527366 sc-eQTL 7.08e-01 -0.0391 0.104 0.546 B_Activated L2
ENSG00000173598 NUDT4 554739 sc-eQTL 7.44e-01 0.0287 0.0876 0.546 B_Activated L2
ENSG00000177889 UBE2N 490675 sc-eQTL 8.96e-01 0.0142 0.109 0.546 B_Activated L2
ENSG00000198015 MRPL42 465134 sc-eQTL 9.13e-01 -0.0115 0.105 0.546 B_Activated L2
ENSG00000257345 LINC02413 933404 sc-eQTL 5.92e-01 -0.0549 0.102 0.546 B_Activated L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 7.86e-01 -0.0248 0.0913 0.549 B_Intermediate L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 7.99e-01 -0.0196 0.0769 0.549 B_Intermediate L2
ENSG00000169372 CRADD 255247 sc-eQTL 6.78e-01 0.0379 0.0913 0.549 B_Intermediate L2
ENSG00000173588 CEP83 -527366 sc-eQTL 4.39e-01 0.066 0.0851 0.549 B_Intermediate L2
ENSG00000173598 NUDT4 554739 sc-eQTL 6.59e-01 -0.0337 0.0762 0.549 B_Intermediate L2
ENSG00000177889 UBE2N 490675 sc-eQTL 8.95e-01 -0.0102 0.0776 0.549 B_Intermediate L2
ENSG00000198015 MRPL42 465134 sc-eQTL 3.92e-01 0.081 0.0944 0.549 B_Intermediate L2
ENSG00000257345 LINC02413 933404 sc-eQTL 9.71e-01 0.00336 0.0933 0.549 B_Intermediate L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 4.39e-02 0.194 0.0955 0.547 B_Memory L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 3.56e-01 0.069 0.0745 0.547 B_Memory L2
ENSG00000169372 CRADD 255247 sc-eQTL 4.33e-01 0.0766 0.0976 0.547 B_Memory L2
ENSG00000173588 CEP83 -527366 sc-eQTL 7.76e-02 -0.153 0.0865 0.547 B_Memory L2
ENSG00000173598 NUDT4 554739 sc-eQTL 9.07e-01 0.00822 0.07 0.547 B_Memory L2
ENSG00000177889 UBE2N 490675 sc-eQTL 2.74e-01 -0.0685 0.0624 0.547 B_Memory L2
ENSG00000198015 MRPL42 465134 sc-eQTL 9.31e-01 0.00803 0.093 0.547 B_Memory L2
ENSG00000257345 LINC02413 933404 sc-eQTL 3.64e-01 -0.0844 0.0928 0.547 B_Memory L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 1.93e-01 -0.118 0.0902 0.549 B_Naive1 L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 3.83e-01 0.0671 0.0768 0.549 B_Naive1 L2
ENSG00000169372 CRADD 255247 sc-eQTL 1.90e-01 0.126 0.0962 0.549 B_Naive1 L2
ENSG00000173588 CEP83 -527366 sc-eQTL 9.66e-01 0.00343 0.0795 0.549 B_Naive1 L2
ENSG00000173598 NUDT4 554739 sc-eQTL 6.27e-01 -0.0336 0.0691 0.549 B_Naive1 L2
ENSG00000177889 UBE2N 490675 sc-eQTL 2.18e-01 0.0915 0.0741 0.549 B_Naive1 L2
ENSG00000198015 MRPL42 465134 sc-eQTL 6.87e-01 0.0346 0.0858 0.549 B_Naive1 L2
ENSG00000257345 LINC02413 933404 sc-eQTL 3.32e-01 0.0882 0.0908 0.549 B_Naive1 L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 5.05e-02 0.174 0.0884 0.547 B_Naive2 L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 8.35e-01 0.0175 0.0835 0.547 B_Naive2 L2
ENSG00000169372 CRADD 255247 sc-eQTL 7.24e-01 0.0333 0.094 0.547 B_Naive2 L2
ENSG00000173588 CEP83 -527366 sc-eQTL 3.84e-01 0.0767 0.088 0.547 B_Naive2 L2
ENSG00000173598 NUDT4 554739 sc-eQTL 2.60e-01 0.0876 0.0775 0.547 B_Naive2 L2
ENSG00000177889 UBE2N 490675 sc-eQTL 8.41e-01 -0.0153 0.0761 0.547 B_Naive2 L2
ENSG00000198015 MRPL42 465134 sc-eQTL 6.00e-01 -0.0518 0.0986 0.547 B_Naive2 L2
ENSG00000257345 LINC02413 933404 sc-eQTL 7.01e-01 -0.0364 0.0946 0.547 B_Naive2 L2
ENSG00000120833 SOCS2 362808 sc-eQTL 7.99e-01 0.0243 0.0954 0.545 CD4_CTL L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 3.24e-01 -0.0897 0.0907 0.545 CD4_CTL L2
ENSG00000169372 CRADD 255247 sc-eQTL 8.82e-01 -0.0137 0.0923 0.545 CD4_CTL L2
ENSG00000173588 CEP83 -527366 sc-eQTL 6.00e-01 -0.0489 0.0929 0.545 CD4_CTL L2
ENSG00000173598 NUDT4 554739 sc-eQTL 4.29e-02 -0.182 0.0895 0.545 CD4_CTL L2
ENSG00000177889 UBE2N 490675 sc-eQTL 2.35e-01 -0.11 0.0919 0.545 CD4_CTL L2
ENSG00000198015 MRPL42 465134 sc-eQTL 6.66e-01 -0.0446 0.103 0.545 CD4_CTL L2
ENSG00000120833 SOCS2 362808 sc-eQTL 2.47e-02 -0.12 0.053 0.549 CD4_Naive L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 5.09e-01 -0.0401 0.0606 0.549 CD4_Naive L2
ENSG00000169372 CRADD 255247 sc-eQTL 2.07e-02 0.213 0.0915 0.549 CD4_Naive L2
ENSG00000173588 CEP83 -527366 sc-eQTL 9.12e-01 0.00723 0.0656 0.549 CD4_Naive L2
ENSG00000173598 NUDT4 554739 sc-eQTL 7.56e-02 -0.0965 0.054 0.549 CD4_Naive L2
ENSG00000177889 UBE2N 490675 sc-eQTL 6.44e-01 0.0242 0.0522 0.549 CD4_Naive L2
ENSG00000198015 MRPL42 465134 sc-eQTL 6.82e-01 0.036 0.0877 0.549 CD4_Naive L2
ENSG00000120833 SOCS2 362808 sc-eQTL 7.25e-01 0.0214 0.0608 0.549 CD4_TCM L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 8.44e-01 0.0143 0.0722 0.549 CD4_TCM L2
ENSG00000169372 CRADD 255247 sc-eQTL 3.96e-01 -0.0828 0.0973 0.549 CD4_TCM L2
ENSG00000173588 CEP83 -527366 sc-eQTL 6.18e-01 -0.0384 0.077 0.549 CD4_TCM L2
ENSG00000173598 NUDT4 554739 sc-eQTL 4.07e-01 -0.0507 0.061 0.549 CD4_TCM L2
ENSG00000177889 UBE2N 490675 sc-eQTL 6.54e-01 -0.0263 0.0587 0.549 CD4_TCM L2
ENSG00000198015 MRPL42 465134 sc-eQTL 4.17e-01 0.0729 0.0896 0.549 CD4_TCM L2
ENSG00000120833 SOCS2 362808 sc-eQTL 7.08e-01 0.0244 0.0653 0.549 CD4_TEM L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 8.06e-01 -0.0192 0.0782 0.549 CD4_TEM L2
ENSG00000169372 CRADD 255247 sc-eQTL 3.82e-01 0.0843 0.0961 0.549 CD4_TEM L2
ENSG00000173588 CEP83 -527366 sc-eQTL 5.60e-02 0.167 0.0871 0.549 CD4_TEM L2
ENSG00000173598 NUDT4 554739 sc-eQTL 1.88e-01 -0.0999 0.0756 0.549 CD4_TEM L2
ENSG00000177889 UBE2N 490675 sc-eQTL 3.20e-02 -0.167 0.0772 0.549 CD4_TEM L2
ENSG00000198015 MRPL42 465134 sc-eQTL 1.89e-01 0.113 0.0854 0.549 CD4_TEM L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 2.12e-01 -0.0964 0.077 0.549 CD8_CTL L2
ENSG00000120833 SOCS2 362808 sc-eQTL 5.25e-01 -0.0497 0.0781 0.549 CD8_CTL L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 9.84e-01 -0.00155 0.0793 0.549 CD8_CTL L2
ENSG00000169372 CRADD 255247 sc-eQTL 1.73e-01 -0.131 0.0959 0.549 CD8_CTL L2
ENSG00000173588 CEP83 -527366 sc-eQTL 9.08e-03 -0.226 0.0859 0.549 CD8_CTL L2
ENSG00000173598 NUDT4 554739 sc-eQTL 1.13e-01 -0.113 0.071 0.549 CD8_CTL L2
ENSG00000177889 UBE2N 490675 sc-eQTL 8.64e-01 0.0142 0.0829 0.549 CD8_CTL L2
ENSG00000198015 MRPL42 465134 sc-eQTL 8.42e-01 0.019 0.095 0.549 CD8_CTL L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 9.93e-01 -0.000619 0.0704 0.549 CD8_Naive L2
ENSG00000120833 SOCS2 362808 sc-eQTL 2.67e-01 0.0819 0.0736 0.549 CD8_Naive L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 1.88e-01 -0.109 0.0823 0.549 CD8_Naive L2
ENSG00000169372 CRADD 255247 sc-eQTL 1.92e-01 0.125 0.0953 0.549 CD8_Naive L2
ENSG00000173588 CEP83 -527366 sc-eQTL 3.49e-01 -0.0747 0.0796 0.549 CD8_Naive L2
ENSG00000173598 NUDT4 554739 sc-eQTL 3.39e-02 -0.14 0.0655 0.549 CD8_Naive L2
ENSG00000177889 UBE2N 490675 sc-eQTL 2.05e-01 -0.0914 0.0719 0.549 CD8_Naive L2
ENSG00000198015 MRPL42 465134 sc-eQTL 4.44e-02 0.185 0.0913 0.549 CD8_Naive L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 9.14e-01 -0.00814 0.0749 0.549 CD8_TCM L2
ENSG00000120833 SOCS2 362808 sc-eQTL 8.47e-01 -0.0161 0.0835 0.549 CD8_TCM L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 8.46e-02 -0.161 0.0931 0.549 CD8_TCM L2
ENSG00000169372 CRADD 255247 sc-eQTL 1.35e-01 0.148 0.0986 0.549 CD8_TCM L2
ENSG00000173588 CEP83 -527366 sc-eQTL 6.29e-02 0.179 0.0955 0.549 CD8_TCM L2
ENSG00000173598 NUDT4 554739 sc-eQTL 5.58e-01 0.0462 0.0787 0.549 CD8_TCM L2
ENSG00000177889 UBE2N 490675 sc-eQTL 4.47e-02 -0.187 0.0928 0.549 CD8_TCM L2
ENSG00000198015 MRPL42 465134 sc-eQTL 4.64e-01 0.0704 0.0959 0.549 CD8_TCM L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 8.38e-01 -0.0171 0.0836 0.541 CD8_TEM L2
ENSG00000120833 SOCS2 362808 sc-eQTL 5.41e-01 0.0545 0.089 0.541 CD8_TEM L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 9.26e-01 -0.00867 0.0938 0.541 CD8_TEM L2
ENSG00000169372 CRADD 255247 sc-eQTL 3.18e-01 -0.0993 0.0992 0.541 CD8_TEM L2
ENSG00000173588 CEP83 -527366 sc-eQTL 3.09e-01 -0.0985 0.0966 0.541 CD8_TEM L2
ENSG00000173598 NUDT4 554739 sc-eQTL 9.39e-01 0.00699 0.0915 0.541 CD8_TEM L2
ENSG00000177889 UBE2N 490675 sc-eQTL 8.83e-01 0.0129 0.0874 0.541 CD8_TEM L2
ENSG00000198015 MRPL42 465134 sc-eQTL 8.80e-01 -0.0136 0.0906 0.541 CD8_TEM L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 5.90e-01 0.0432 0.0802 0.55 MAIT L2
ENSG00000120833 SOCS2 362808 sc-eQTL 9.87e-01 0.00139 0.0854 0.55 MAIT L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 6.01e-02 -0.147 0.078 0.55 MAIT L2
ENSG00000169372 CRADD 255247 sc-eQTL 8.38e-01 -0.0205 0.1 0.55 MAIT L2
ENSG00000173588 CEP83 -527366 sc-eQTL 4.54e-02 -0.18 0.0892 0.55 MAIT L2
ENSG00000173598 NUDT4 554739 sc-eQTL 5.78e-01 -0.0404 0.0725 0.55 MAIT L2
ENSG00000177889 UBE2N 490675 sc-eQTL 7.52e-01 -0.0281 0.089 0.55 MAIT L2
ENSG00000198015 MRPL42 465134 sc-eQTL 3.35e-01 -0.0876 0.0907 0.55 MAIT L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 7.88e-01 -0.0255 0.0947 0.544 NK_CD56bright L2
ENSG00000120833 SOCS2 362808 sc-eQTL 2.07e-01 0.108 0.0856 0.544 NK_CD56bright L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 3.18e-01 0.0836 0.0835 0.544 NK_CD56bright L2
ENSG00000169372 CRADD 255247 sc-eQTL 7.77e-01 0.0288 0.102 0.544 NK_CD56bright L2
ENSG00000173588 CEP83 -527366 sc-eQTL 8.13e-01 -0.0201 0.0848 0.544 NK_CD56bright L2
ENSG00000173598 NUDT4 554739 sc-eQTL 1.56e-01 -0.129 0.0903 0.544 NK_CD56bright L2
ENSG00000177889 UBE2N 490675 sc-eQTL 7.90e-01 0.0256 0.0963 0.544 NK_CD56bright L2
ENSG00000198015 MRPL42 465134 sc-eQTL 9.46e-01 0.00655 0.0959 0.544 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 360854 sc-eQTL 1.96e-01 0.116 0.089 0.544 NK_CD56bright L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 9.31e-01 -0.007 0.0811 0.545 NK_CD56dim L2
ENSG00000120833 SOCS2 362808 sc-eQTL 3.60e-01 0.0634 0.0691 0.545 NK_CD56dim L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 3.29e-01 -0.0735 0.0751 0.545 NK_CD56dim L2
ENSG00000169372 CRADD 255247 sc-eQTL 5.66e-01 0.0563 0.098 0.545 NK_CD56dim L2
ENSG00000173588 CEP83 -527366 sc-eQTL 1.75e-02 -0.206 0.0858 0.545 NK_CD56dim L2
ENSG00000173598 NUDT4 554739 sc-eQTL 2.09e-01 -0.0872 0.0692 0.545 NK_CD56dim L2
ENSG00000177889 UBE2N 490675 sc-eQTL 7.06e-01 -0.0252 0.0667 0.545 NK_CD56dim L2
ENSG00000198015 MRPL42 465134 sc-eQTL 6.93e-01 0.0365 0.0924 0.545 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 360854 sc-eQTL 9.10e-01 0.0108 0.0951 0.545 NK_CD56dim L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 8.84e-01 -0.0134 0.0922 0.553 NK_HLA L2
ENSG00000120833 SOCS2 362808 sc-eQTL 6.47e-01 0.0419 0.0913 0.553 NK_HLA L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 5.30e-01 -0.0525 0.0834 0.553 NK_HLA L2
ENSG00000169372 CRADD 255247 sc-eQTL 8.72e-01 -0.0165 0.102 0.553 NK_HLA L2
ENSG00000173588 CEP83 -527366 sc-eQTL 5.43e-01 0.0583 0.0958 0.553 NK_HLA L2
ENSG00000173598 NUDT4 554739 sc-eQTL 1.68e-01 -0.118 0.0851 0.553 NK_HLA L2
ENSG00000177889 UBE2N 490675 sc-eQTL 4.09e-01 -0.0791 0.0957 0.553 NK_HLA L2
ENSG00000198015 MRPL42 465134 sc-eQTL 7.84e-01 0.0293 0.107 0.553 NK_HLA L2
ENSG00000246985 SOCS2-AS1 360854 sc-eQTL 6.92e-02 0.157 0.0857 0.553 NK_HLA L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 9.15e-01 -0.0094 0.0882 0.545 NK_cytokine L2
ENSG00000120833 SOCS2 362808 sc-eQTL 4.10e-01 0.0635 0.077 0.545 NK_cytokine L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 6.99e-01 0.0303 0.0781 0.545 NK_cytokine L2
ENSG00000169372 CRADD 255247 sc-eQTL 9.50e-01 -0.00546 0.0873 0.545 NK_cytokine L2
ENSG00000173588 CEP83 -527366 sc-eQTL 9.11e-01 0.01 0.0898 0.545 NK_cytokine L2
ENSG00000173598 NUDT4 554739 sc-eQTL 4.63e-01 -0.0504 0.0686 0.545 NK_cytokine L2
ENSG00000177889 UBE2N 490675 sc-eQTL 4.57e-01 -0.0587 0.0788 0.545 NK_cytokine L2
ENSG00000198015 MRPL42 465134 sc-eQTL 4.58e-01 0.068 0.0914 0.545 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 360854 sc-eQTL 1.71e-01 0.125 0.0911 0.545 NK_cytokine L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 6.91e-01 0.0416 0.104 0.581 PB L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 1.51e-01 0.153 0.106 0.581 PB L2
ENSG00000169372 CRADD 255247 sc-eQTL 6.25e-01 -0.0483 0.0986 0.581 PB L2
ENSG00000173588 CEP83 -527366 sc-eQTL 6.29e-01 0.0539 0.111 0.581 PB L2
ENSG00000173598 NUDT4 554739 sc-eQTL 8.70e-01 -0.0152 0.0922 0.581 PB L2
ENSG00000177889 UBE2N 490675 sc-eQTL 9.81e-01 0.00197 0.0812 0.581 PB L2
ENSG00000198015 MRPL42 465134 sc-eQTL 8.49e-01 0.0213 0.112 0.581 PB L2
ENSG00000257345 LINC02413 933404 sc-eQTL 9.36e-02 0.181 0.107 0.581 PB L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 1.95e-01 -0.105 0.0805 0.55 Pro_T L2
ENSG00000120833 SOCS2 362808 sc-eQTL 2.32e-01 -0.103 0.0861 0.55 Pro_T L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 5.14e-01 -0.06 0.0918 0.55 Pro_T L2
ENSG00000169372 CRADD 255247 sc-eQTL 5.84e-01 -0.0492 0.0897 0.55 Pro_T L2
ENSG00000173588 CEP83 -527366 sc-eQTL 8.63e-01 0.0157 0.091 0.55 Pro_T L2
ENSG00000173598 NUDT4 554739 sc-eQTL 4.70e-01 0.0526 0.0727 0.55 Pro_T L2
ENSG00000177889 UBE2N 490675 sc-eQTL 8.17e-01 -0.0155 0.0671 0.55 Pro_T L2
ENSG00000198015 MRPL42 465134 sc-eQTL 5.87e-01 0.0439 0.0806 0.55 Pro_T L2
ENSG00000120833 SOCS2 362808 sc-eQTL 9.92e-01 -0.000821 0.0815 0.549 Treg L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 8.59e-01 0.0153 0.0859 0.549 Treg L2
ENSG00000169372 CRADD 255247 sc-eQTL 5.08e-01 -0.0657 0.0991 0.549 Treg L2
ENSG00000173588 CEP83 -527366 sc-eQTL 4.52e-01 0.0691 0.0918 0.549 Treg L2
ENSG00000173598 NUDT4 554739 sc-eQTL 6.57e-01 -0.0312 0.0702 0.549 Treg L2
ENSG00000177889 UBE2N 490675 sc-eQTL 4.36e-01 0.0591 0.0757 0.549 Treg L2
ENSG00000198015 MRPL42 465134 sc-eQTL 5.04e-01 -0.0638 0.0953 0.549 Treg L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 6.00e-01 -0.0532 0.101 0.539 cDC L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 5.07e-01 -0.0589 0.0885 0.539 cDC L2
ENSG00000169372 CRADD 255247 sc-eQTL 2.04e-01 0.124 0.0975 0.539 cDC L2
ENSG00000173588 CEP83 -527366 sc-eQTL 4.42e-01 0.0639 0.0829 0.539 cDC L2
ENSG00000173598 NUDT4 554739 sc-eQTL 7.27e-01 -0.0348 0.0995 0.539 cDC L2
ENSG00000177889 UBE2N 490675 sc-eQTL 9.79e-01 -0.00223 0.0866 0.539 cDC L2
ENSG00000198015 MRPL42 465134 sc-eQTL 7.62e-01 -0.03 0.0992 0.539 cDC L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 2.21e-01 0.0903 0.0735 0.549 cMono_IL1B L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 1.11e-01 -0.104 0.0647 0.549 cMono_IL1B L2
ENSG00000169372 CRADD 255247 sc-eQTL 3.05e-01 0.0992 0.0965 0.549 cMono_IL1B L2
ENSG00000173588 CEP83 -527366 sc-eQTL 9.23e-01 0.00862 0.0887 0.549 cMono_IL1B L2
ENSG00000173598 NUDT4 554739 sc-eQTL 4.08e-01 -0.0587 0.0707 0.549 cMono_IL1B L2
ENSG00000177889 UBE2N 490675 sc-eQTL 6.21e-01 0.0275 0.0555 0.549 cMono_IL1B L2
ENSG00000198015 MRPL42 465134 sc-eQTL 4.89e-01 0.0533 0.0769 0.549 cMono_IL1B L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 5.86e-01 -0.0456 0.0835 0.549 cMono_S100A L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 7.11e-01 0.0253 0.0681 0.549 cMono_S100A L2
ENSG00000169372 CRADD 255247 sc-eQTL 7.12e-01 0.0386 0.104 0.549 cMono_S100A L2
ENSG00000173588 CEP83 -527366 sc-eQTL 1.95e-01 0.125 0.096 0.549 cMono_S100A L2
ENSG00000173598 NUDT4 554739 sc-eQTL 4.86e-01 -0.0571 0.0819 0.549 cMono_S100A L2
ENSG00000177889 UBE2N 490675 sc-eQTL 1.51e-01 -0.102 0.071 0.549 cMono_S100A L2
ENSG00000198015 MRPL42 465134 sc-eQTL 6.57e-01 0.0364 0.0818 0.549 cMono_S100A L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 1.73e-02 -0.218 0.0904 0.539 gdT L2
ENSG00000120833 SOCS2 362808 sc-eQTL 2.78e-01 0.12 0.111 0.539 gdT L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 9.05e-02 0.196 0.115 0.539 gdT L2
ENSG00000169372 CRADD 255247 sc-eQTL 3.70e-03 -0.327 0.111 0.539 gdT L2
ENSG00000173588 CEP83 -527366 sc-eQTL 5.30e-01 -0.0714 0.113 0.539 gdT L2
ENSG00000173598 NUDT4 554739 sc-eQTL 1.63e-01 0.151 0.108 0.539 gdT L2
ENSG00000177889 UBE2N 490675 sc-eQTL 6.44e-01 -0.0549 0.119 0.539 gdT L2
ENSG00000198015 MRPL42 465134 sc-eQTL 5.66e-01 0.0665 0.116 0.539 gdT L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 7.39e-01 -0.0329 0.0984 0.547 intMono L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 9.47e-01 0.00555 0.083 0.547 intMono L2
ENSG00000169372 CRADD 255247 sc-eQTL 5.06e-01 0.0637 0.0955 0.547 intMono L2
ENSG00000173588 CEP83 -527366 sc-eQTL 7.22e-01 0.0356 0.0999 0.547 intMono L2
ENSG00000173598 NUDT4 554739 sc-eQTL 8.35e-01 0.0181 0.087 0.547 intMono L2
ENSG00000177889 UBE2N 490675 sc-eQTL 7.04e-02 -0.15 0.0822 0.547 intMono L2
ENSG00000198015 MRPL42 465134 sc-eQTL 8.86e-01 -0.0128 0.0893 0.547 intMono L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 4.93e-01 0.0602 0.0876 0.543 ncMono L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 6.06e-01 -0.0312 0.0604 0.543 ncMono L2
ENSG00000169372 CRADD 255247 sc-eQTL 1.44e-01 0.137 0.0936 0.543 ncMono L2
ENSG00000173588 CEP83 -527366 sc-eQTL 1.88e-01 -0.124 0.0941 0.543 ncMono L2
ENSG00000173598 NUDT4 554739 sc-eQTL 9.80e-01 0.00209 0.0827 0.543 ncMono L2
ENSG00000177889 UBE2N 490675 sc-eQTL 3.13e-01 0.0813 0.0804 0.543 ncMono L2
ENSG00000198015 MRPL42 465134 sc-eQTL 2.46e-01 0.0968 0.0833 0.543 ncMono L2
ENSG00000057704 TMCC3 -717935 sc-eQTL 6.59e-01 0.0457 0.103 0.537 pDC L2
ENSG00000136040 PLXNC1 -215955 sc-eQTL 1.14e-01 -0.162 0.102 0.537 pDC L2
ENSG00000169372 CRADD 255247 sc-eQTL 3.10e-01 0.106 0.104 0.537 pDC L2
ENSG00000173588 CEP83 -527366 sc-eQTL 3.66e-01 -0.1 0.11 0.537 pDC L2
ENSG00000173598 NUDT4 554739 sc-eQTL 5.87e-01 0.0487 0.0895 0.537 pDC L2
ENSG00000177889 UBE2N 490675 sc-eQTL 6.73e-01 0.0449 0.106 0.537 pDC L2
ENSG00000198015 MRPL42 465134 sc-eQTL 9.54e-01 0.00638 0.11 0.537 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -717935 sc-eQTL 9.45e-01 -0.00662 0.0954 0.549 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -215955 sc-eQTL 7.42e-01 0.019 0.0577 0.549 B_Memory LOneK1K
ENSG00000169372 CRADD 255247 sc-eQTL 2.12e-01 0.123 0.0979 0.549 B_Memory LOneK1K
ENSG00000173588 CEP83 -527366 sc-eQTL 7.80e-01 -0.0225 0.0806 0.549 B_Memory LOneK1K
ENSG00000173598 NUDT4 554739 sc-eQTL 7.72e-01 -0.0168 0.0581 0.549 B_Memory LOneK1K
ENSG00000177889 UBE2N 490675 sc-eQTL 2.18e-01 -0.0652 0.0527 0.549 B_Memory LOneK1K
ENSG00000198015 MRPL42 465134 sc-eQTL 6.97e-01 0.0337 0.0862 0.549 B_Memory LOneK1K
ENSG00000257345 LINC02413 933404 sc-eQTL 8.40e-01 -0.0182 0.0898 0.549 B_Memory LOneK1K
ENSG00000057704 TMCC3 -717935 sc-eQTL 8.11e-01 0.0208 0.0866 0.549 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -215955 sc-eQTL 4.41e-01 0.0542 0.0702 0.549 B_Naive LOneK1K
ENSG00000169372 CRADD 255247 sc-eQTL 2.89e-01 0.0989 0.093 0.549 B_Naive LOneK1K
ENSG00000173588 CEP83 -527366 sc-eQTL 8.42e-01 0.0146 0.0733 0.549 B_Naive LOneK1K
ENSG00000173598 NUDT4 554739 sc-eQTL 7.52e-01 0.0216 0.068 0.549 B_Naive LOneK1K
ENSG00000177889 UBE2N 490675 sc-eQTL 3.88e-01 0.0602 0.0697 0.549 B_Naive LOneK1K
ENSG00000198015 MRPL42 465134 sc-eQTL 9.86e-01 0.00147 0.0859 0.549 B_Naive LOneK1K
ENSG00000257345 LINC02413 933404 sc-eQTL 2.90e-01 0.0934 0.0881 0.549 B_Naive LOneK1K
ENSG00000057704 TMCC3 -717935 sc-eQTL 7.82e-01 0.0187 0.0678 0.549 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -215955 sc-eQTL 3.17e-01 -0.0602 0.06 0.549 CD14_Mono LOneK1K
ENSG00000169372 CRADD 255247 sc-eQTL 2.26e-01 0.117 0.0966 0.549 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -527366 sc-eQTL 3.03e-01 0.0844 0.0817 0.549 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 554739 sc-eQTL 1.44e-01 -0.101 0.0691 0.549 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 490675 sc-eQTL 2.42e-01 -0.0611 0.0521 0.549 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 465134 sc-eQTL 2.86e-01 0.0772 0.0723 0.549 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 -717935 sc-eQTL 8.76e-01 0.014 0.089 0.55 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -215955 sc-eQTL 9.39e-01 0.00439 0.0568 0.55 CD16_Mono LOneK1K
ENSG00000169372 CRADD 255247 sc-eQTL 2.20e-01 0.126 0.102 0.55 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -527366 sc-eQTL 9.40e-01 -0.00715 0.0944 0.55 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 554739 sc-eQTL 3.65e-01 0.0695 0.0766 0.55 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 490675 sc-eQTL 8.01e-01 -0.0194 0.0769 0.55 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 465134 sc-eQTL 1.95e-01 0.105 0.0808 0.55 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 -717935 sc-eQTL 6.89e-01 0.0322 0.0803 0.545 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 362808 sc-eQTL 2.11e-01 0.0781 0.0623 0.545 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -215955 sc-eQTL 2.38e-01 -0.0805 0.0681 0.545 NK_CD56dim LOneK1K
ENSG00000169372 CRADD 255247 sc-eQTL 9.91e-01 -0.00105 0.0966 0.545 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -527366 sc-eQTL 8.70e-02 -0.131 0.0763 0.545 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 554739 sc-eQTL 3.42e-02 -0.129 0.0606 0.545 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 490675 sc-eQTL 1.11e-01 -0.0942 0.0589 0.545 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 465134 sc-eQTL 5.02e-01 0.0594 0.0884 0.545 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 360854 sc-eQTL 1.55e-01 0.138 0.0967 0.545 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000169372 \N 255247 1.26e-06 9.73e-07 2.77e-07 9.2e-07 2.19e-07 4.77e-07 1.26e-06 3.22e-07 1.2e-06 4.03e-07 1.5e-06 5.64e-07 2e-06 2.7e-07 4.31e-07 7e-07 7.93e-07 5.69e-07 5.36e-07 6.44e-07 4.39e-07 1.22e-06 9.21e-07 5.79e-07 2.01e-06 3.28e-07 7.12e-07 7.26e-07 1.23e-06 1.12e-06 5.45e-07 4.91e-08 1.82e-07 4.57e-07 4.34e-07 3.91e-07 4.73e-07 1.46e-07 1.96e-07 4.28e-08 2.86e-07 1.49e-06 5.53e-08 4.16e-08 1.92e-07 1e-07 2.01e-07 8.66e-08 6.58e-08
ENSG00000186076 \N 291036 1.25e-06 9.35e-07 2.15e-07 4.15e-07 1.14e-07 3.69e-07 8.73e-07 2.64e-07 9.42e-07 3.09e-07 1.26e-06 5.81e-07 1.46e-06 2.5e-07 4.21e-07 4.53e-07 7.68e-07 5.31e-07 4e-07 3.99e-07 2.89e-07 8.19e-07 6.33e-07 3.93e-07 1.74e-06 2.44e-07 5.82e-07 5.31e-07 8.4e-07 9.11e-07 4.53e-07 4.31e-08 9.89e-08 2.33e-07 3.35e-07 2.76e-07 3.4e-07 1.15e-07 1.13e-07 1.8e-08 1.79e-07 1.22e-06 6.81e-08 1.95e-08 1.89e-07 6.87e-08 1.68e-07 7.19e-08 5.26e-08