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Genes within 1Mb (chr12:93930217:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -720340 sc-eQTL 9.87e-01 0.00144 0.0897 0.423 B L1
ENSG00000136040 PLXNC1 -218360 sc-eQTL 6.92e-01 -0.0202 0.0508 0.423 B L1
ENSG00000169372 CRADD 252842 sc-eQTL 8.78e-02 -0.131 0.0764 0.423 B L1
ENSG00000173588 CEP83 -529771 sc-eQTL 6.86e-01 -0.026 0.0641 0.423 B L1
ENSG00000173598 NUDT4 552334 sc-eQTL 5.88e-01 0.031 0.0572 0.423 B L1
ENSG00000177889 UBE2N 488270 sc-eQTL 7.91e-01 0.0134 0.0504 0.423 B L1
ENSG00000198015 MRPL42 462729 sc-eQTL 6.78e-01 -0.0327 0.0787 0.423 B L1
ENSG00000257345 LINC02413 930999 sc-eQTL 7.07e-01 -0.0295 0.0783 0.423 B L1
ENSG00000120833 SOCS2 360403 sc-eQTL 2.38e-01 0.0613 0.0518 0.423 CD4T L1
ENSG00000136040 PLXNC1 -218360 sc-eQTL 5.14e-01 0.0356 0.0545 0.423 CD4T L1
ENSG00000169372 CRADD 252842 sc-eQTL 4.52e-01 -0.0672 0.0892 0.423 CD4T L1
ENSG00000173588 CEP83 -529771 sc-eQTL 9.78e-01 0.00161 0.0571 0.423 CD4T L1
ENSG00000173598 NUDT4 552334 sc-eQTL 3.71e-02 0.107 0.051 0.423 CD4T L1
ENSG00000177889 UBE2N 488270 sc-eQTL 3.17e-01 0.0479 0.0478 0.423 CD4T L1
ENSG00000198015 MRPL42 462729 sc-eQTL 4.00e-01 -0.07 0.0831 0.423 CD4T L1
ENSG00000057704 TMCC3 -720340 sc-eQTL 5.99e-01 0.0271 0.0515 0.423 CD8T L1
ENSG00000120833 SOCS2 360403 sc-eQTL 4.34e-01 -0.0539 0.0688 0.423 CD8T L1
ENSG00000136040 PLXNC1 -218360 sc-eQTL 3.25e-01 0.0698 0.0708 0.423 CD8T L1
ENSG00000169372 CRADD 252842 sc-eQTL 6.39e-01 0.0391 0.0834 0.423 CD8T L1
ENSG00000173588 CEP83 -529771 sc-eQTL 1.19e-01 0.103 0.0659 0.423 CD8T L1
ENSG00000173598 NUDT4 552334 sc-eQTL 6.17e-02 0.0922 0.0491 0.423 CD8T L1
ENSG00000177889 UBE2N 488270 sc-eQTL 1.86e-01 0.0815 0.0614 0.423 CD8T L1
ENSG00000198015 MRPL42 462729 sc-eQTL 3.74e-01 -0.0781 0.0877 0.423 CD8T L1
ENSG00000057704 TMCC3 -720340 sc-eQTL 2.01e-01 0.122 0.0954 0.421 DC L1
ENSG00000136040 PLXNC1 -218360 sc-eQTL 2.91e-01 0.0905 0.0855 0.421 DC L1
ENSG00000169372 CRADD 252842 sc-eQTL 3.48e-01 -0.0908 0.0966 0.421 DC L1
ENSG00000173588 CEP83 -529771 sc-eQTL 4.88e-01 -0.053 0.0763 0.421 DC L1
ENSG00000173598 NUDT4 552334 sc-eQTL 3.92e-01 -0.0681 0.0794 0.421 DC L1
ENSG00000177889 UBE2N 488270 sc-eQTL 8.60e-01 -0.0141 0.0804 0.421 DC L1
ENSG00000198015 MRPL42 462729 sc-eQTL 1.45e-01 -0.134 0.0919 0.421 DC L1
ENSG00000057704 TMCC3 -720340 sc-eQTL 6.93e-01 -0.0259 0.0655 0.423 Mono L1
ENSG00000136040 PLXNC1 -218360 sc-eQTL 5.56e-01 0.0321 0.0543 0.423 Mono L1
ENSG00000169372 CRADD 252842 sc-eQTL 6.04e-02 -0.187 0.0992 0.423 Mono L1
ENSG00000173588 CEP83 -529771 sc-eQTL 6.95e-01 -0.0315 0.0803 0.423 Mono L1
ENSG00000173598 NUDT4 552334 sc-eQTL 4.24e-01 0.0552 0.0689 0.423 Mono L1
ENSG00000177889 UBE2N 488270 sc-eQTL 2.88e-01 0.0551 0.0516 0.423 Mono L1
ENSG00000198015 MRPL42 462729 sc-eQTL 7.95e-02 -0.122 0.0692 0.423 Mono L1
ENSG00000057704 TMCC3 -720340 sc-eQTL 5.72e-01 -0.0445 0.0786 0.425 NK L1
ENSG00000120833 SOCS2 360403 sc-eQTL 2.75e-01 -0.0674 0.0615 0.425 NK L1
ENSG00000136040 PLXNC1 -218360 sc-eQTL 6.72e-01 0.0273 0.0644 0.425 NK L1
ENSG00000169372 CRADD 252842 sc-eQTL 5.51e-01 0.0552 0.0924 0.425 NK L1
ENSG00000173588 CEP83 -529771 sc-eQTL 2.32e-01 0.0875 0.073 0.425 NK L1
ENSG00000173598 NUDT4 552334 sc-eQTL 1.60e-02 0.143 0.059 0.425 NK L1
ENSG00000177889 UBE2N 488270 sc-eQTL 2.77e-02 0.13 0.0585 0.425 NK L1
ENSG00000198015 MRPL42 462729 sc-eQTL 4.05e-01 -0.0705 0.0845 0.425 NK L1
ENSG00000246985 SOCS2-AS1 358449 sc-eQTL 9.38e-02 -0.161 0.0958 0.425 NK L1
ENSG00000057704 TMCC3 -720340 sc-eQTL 1.64e-01 0.112 0.0803 0.423 Other_T L1
ENSG00000120833 SOCS2 360403 sc-eQTL 6.77e-01 -0.0331 0.0795 0.423 Other_T L1
ENSG00000136040 PLXNC1 -218360 sc-eQTL 3.59e-02 0.156 0.0738 0.423 Other_T L1
ENSG00000169372 CRADD 252842 sc-eQTL 2.13e-01 0.112 0.0899 0.423 Other_T L1
ENSG00000173588 CEP83 -529771 sc-eQTL 1.22e-01 0.129 0.0834 0.423 Other_T L1
ENSG00000173598 NUDT4 552334 sc-eQTL 6.42e-01 -0.03 0.0644 0.423 Other_T L1
ENSG00000177889 UBE2N 488270 sc-eQTL 2.72e-01 0.0656 0.0595 0.423 Other_T L1
ENSG00000198015 MRPL42 462729 sc-eQTL 4.78e-01 0.0501 0.0706 0.423 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -720340 sc-eQTL 9.54e-01 -0.00517 0.0896 0.429 B_Activated L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 6.78e-01 -0.0352 0.0846 0.429 B_Activated L2
ENSG00000169372 CRADD 252842 sc-eQTL 2.67e-01 -0.11 0.0989 0.429 B_Activated L2
ENSG00000173588 CEP83 -529771 sc-eQTL 6.32e-01 0.0505 0.105 0.429 B_Activated L2
ENSG00000173598 NUDT4 552334 sc-eQTL 9.73e-01 -0.00299 0.0884 0.429 B_Activated L2
ENSG00000177889 UBE2N 488270 sc-eQTL 7.76e-01 -0.0312 0.11 0.429 B_Activated L2
ENSG00000198015 MRPL42 462729 sc-eQTL 5.55e-01 -0.0629 0.106 0.429 B_Activated L2
ENSG00000257345 LINC02413 930999 sc-eQTL 2.64e-01 0.115 0.103 0.429 B_Activated L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 7.46e-01 0.0297 0.0913 0.423 B_Intermediate L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 5.48e-01 0.0462 0.0768 0.423 B_Intermediate L2
ENSG00000169372 CRADD 252842 sc-eQTL 5.84e-01 -0.0501 0.0913 0.423 B_Intermediate L2
ENSG00000173588 CEP83 -529771 sc-eQTL 3.83e-01 -0.0744 0.085 0.423 B_Intermediate L2
ENSG00000173598 NUDT4 552334 sc-eQTL 8.23e-01 0.0171 0.0762 0.423 B_Intermediate L2
ENSG00000177889 UBE2N 488270 sc-eQTL 9.27e-01 0.00707 0.0776 0.423 B_Intermediate L2
ENSG00000198015 MRPL42 462729 sc-eQTL 6.16e-01 -0.0475 0.0945 0.423 B_Intermediate L2
ENSG00000257345 LINC02413 930999 sc-eQTL 7.83e-01 -0.0257 0.0932 0.423 B_Intermediate L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 6.47e-02 -0.179 0.0966 0.425 B_Memory L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 4.72e-01 -0.0543 0.0753 0.425 B_Memory L2
ENSG00000169372 CRADD 252842 sc-eQTL 1.77e-01 -0.133 0.0982 0.425 B_Memory L2
ENSG00000173588 CEP83 -529771 sc-eQTL 4.97e-02 0.172 0.0872 0.425 B_Memory L2
ENSG00000173598 NUDT4 552334 sc-eQTL 9.12e-01 0.00784 0.0707 0.425 B_Memory L2
ENSG00000177889 UBE2N 488270 sc-eQTL 3.09e-01 0.0643 0.0631 0.425 B_Memory L2
ENSG00000198015 MRPL42 462729 sc-eQTL 3.50e-01 -0.0879 0.0937 0.425 B_Memory L2
ENSG00000257345 LINC02413 930999 sc-eQTL 1.10e-01 0.15 0.0933 0.425 B_Memory L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 1.39e-01 0.134 0.09 0.423 B_Naive1 L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 2.78e-01 -0.0834 0.0767 0.423 B_Naive1 L2
ENSG00000169372 CRADD 252842 sc-eQTL 1.39e-01 -0.142 0.096 0.423 B_Naive1 L2
ENSG00000173588 CEP83 -529771 sc-eQTL 8.68e-01 0.0132 0.0794 0.423 B_Naive1 L2
ENSG00000173598 NUDT4 552334 sc-eQTL 4.05e-01 0.0575 0.069 0.423 B_Naive1 L2
ENSG00000177889 UBE2N 488270 sc-eQTL 1.98e-01 -0.0956 0.074 0.423 B_Naive1 L2
ENSG00000198015 MRPL42 462729 sc-eQTL 5.01e-01 -0.0578 0.0857 0.423 B_Naive1 L2
ENSG00000257345 LINC02413 930999 sc-eQTL 2.87e-01 -0.0968 0.0907 0.423 B_Naive1 L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 1.13e-01 -0.141 0.0889 0.425 B_Naive2 L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 4.97e-01 -0.0568 0.0835 0.425 B_Naive2 L2
ENSG00000169372 CRADD 252842 sc-eQTL 8.43e-01 -0.0187 0.0942 0.425 B_Naive2 L2
ENSG00000173588 CEP83 -529771 sc-eQTL 3.57e-01 -0.0814 0.0881 0.425 B_Naive2 L2
ENSG00000173598 NUDT4 552334 sc-eQTL 5.82e-01 -0.0429 0.0778 0.425 B_Naive2 L2
ENSG00000177889 UBE2N 488270 sc-eQTL 6.20e-01 0.0379 0.0762 0.425 B_Naive2 L2
ENSG00000198015 MRPL42 462729 sc-eQTL 9.96e-01 0.000494 0.0988 0.425 B_Naive2 L2
ENSG00000257345 LINC02413 930999 sc-eQTL 3.08e-01 0.0966 0.0946 0.425 B_Naive2 L2
ENSG00000120833 SOCS2 360403 sc-eQTL 6.10e-01 -0.0491 0.0961 0.425 CD4_CTL L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 6.69e-01 0.0392 0.0916 0.425 CD4_CTL L2
ENSG00000169372 CRADD 252842 sc-eQTL 4.95e-01 0.0635 0.0929 0.425 CD4_CTL L2
ENSG00000173588 CEP83 -529771 sc-eQTL 7.67e-01 0.0278 0.0937 0.425 CD4_CTL L2
ENSG00000173598 NUDT4 552334 sc-eQTL 1.28e-02 0.225 0.0897 0.425 CD4_CTL L2
ENSG00000177889 UBE2N 488270 sc-eQTL 1.99e-01 0.119 0.0926 0.425 CD4_CTL L2
ENSG00000198015 MRPL42 462729 sc-eQTL 8.75e-01 0.0163 0.104 0.425 CD4_CTL L2
ENSG00000120833 SOCS2 360403 sc-eQTL 6.07e-02 0.101 0.0536 0.423 CD4_Naive L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 4.57e-01 0.0455 0.0611 0.423 CD4_Naive L2
ENSG00000169372 CRADD 252842 sc-eQTL 4.62e-02 -0.186 0.0925 0.423 CD4_Naive L2
ENSG00000173588 CEP83 -529771 sc-eQTL 8.84e-01 0.0097 0.0662 0.423 CD4_Naive L2
ENSG00000173598 NUDT4 552334 sc-eQTL 3.45e-02 0.116 0.0543 0.423 CD4_Naive L2
ENSG00000177889 UBE2N 488270 sc-eQTL 8.39e-01 -0.0107 0.0527 0.423 CD4_Naive L2
ENSG00000198015 MRPL42 462729 sc-eQTL 4.06e-01 -0.0736 0.0883 0.423 CD4_Naive L2
ENSG00000120833 SOCS2 360403 sc-eQTL 9.16e-01 -0.00648 0.061 0.423 CD4_TCM L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 9.99e-01 -0.000122 0.0725 0.423 CD4_TCM L2
ENSG00000169372 CRADD 252842 sc-eQTL 6.48e-01 0.0446 0.0977 0.423 CD4_TCM L2
ENSG00000173588 CEP83 -529771 sc-eQTL 5.78e-01 0.0431 0.0772 0.423 CD4_TCM L2
ENSG00000173598 NUDT4 552334 sc-eQTL 4.20e-01 0.0495 0.0612 0.423 CD4_TCM L2
ENSG00000177889 UBE2N 488270 sc-eQTL 3.60e-01 0.054 0.0588 0.423 CD4_TCM L2
ENSG00000198015 MRPL42 462729 sc-eQTL 2.81e-01 -0.0969 0.0897 0.423 CD4_TCM L2
ENSG00000120833 SOCS2 360403 sc-eQTL 6.34e-01 -0.0313 0.0656 0.423 CD4_TEM L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 9.20e-01 -0.00789 0.0786 0.423 CD4_TEM L2
ENSG00000169372 CRADD 252842 sc-eQTL 2.42e-01 -0.113 0.0965 0.423 CD4_TEM L2
ENSG00000173588 CEP83 -529771 sc-eQTL 4.86e-02 -0.174 0.0875 0.423 CD4_TEM L2
ENSG00000173598 NUDT4 552334 sc-eQTL 2.22e-01 0.0932 0.0761 0.423 CD4_TEM L2
ENSG00000177889 UBE2N 488270 sc-eQTL 3.26e-03 0.229 0.0768 0.423 CD4_TEM L2
ENSG00000198015 MRPL42 462729 sc-eQTL 2.94e-01 -0.0904 0.086 0.423 CD4_TEM L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 3.48e-01 0.0732 0.0778 0.423 CD8_CTL L2
ENSG00000120833 SOCS2 360403 sc-eQTL 3.69e-01 0.0709 0.0787 0.423 CD8_CTL L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 6.72e-01 -0.0339 0.0799 0.423 CD8_CTL L2
ENSG00000169372 CRADD 252842 sc-eQTL 1.05e-01 0.157 0.0966 0.423 CD8_CTL L2
ENSG00000173588 CEP83 -529771 sc-eQTL 7.13e-03 0.235 0.0866 0.423 CD8_CTL L2
ENSG00000173598 NUDT4 552334 sc-eQTL 1.67e-01 0.0993 0.0717 0.423 CD8_CTL L2
ENSG00000177889 UBE2N 488270 sc-eQTL 9.48e-01 -0.00541 0.0836 0.423 CD8_CTL L2
ENSG00000198015 MRPL42 462729 sc-eQTL 6.53e-01 -0.0432 0.0958 0.423 CD8_CTL L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 8.54e-01 0.0131 0.0707 0.423 CD8_Naive L2
ENSG00000120833 SOCS2 360403 sc-eQTL 2.22e-01 -0.0905 0.0739 0.423 CD8_Naive L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 2.48e-01 0.096 0.0828 0.423 CD8_Naive L2
ENSG00000169372 CRADD 252842 sc-eQTL 4.53e-01 -0.0721 0.096 0.423 CD8_Naive L2
ENSG00000173588 CEP83 -529771 sc-eQTL 4.81e-01 0.0564 0.08 0.423 CD8_Naive L2
ENSG00000173598 NUDT4 552334 sc-eQTL 4.68e-02 0.132 0.0659 0.423 CD8_Naive L2
ENSG00000177889 UBE2N 488270 sc-eQTL 1.37e-01 0.108 0.0721 0.423 CD8_Naive L2
ENSG00000198015 MRPL42 462729 sc-eQTL 5.23e-02 -0.179 0.0918 0.423 CD8_Naive L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 8.67e-01 0.0127 0.0758 0.421 CD8_TCM L2
ENSG00000120833 SOCS2 360403 sc-eQTL 8.92e-01 0.0115 0.0844 0.421 CD8_TCM L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 1.41e-01 0.14 0.0944 0.421 CD8_TCM L2
ENSG00000169372 CRADD 252842 sc-eQTL 5.88e-01 -0.0544 0.1 0.421 CD8_TCM L2
ENSG00000173588 CEP83 -529771 sc-eQTL 6.18e-02 -0.181 0.0966 0.421 CD8_TCM L2
ENSG00000173598 NUDT4 552334 sc-eQTL 4.74e-01 -0.0571 0.0796 0.421 CD8_TCM L2
ENSG00000177889 UBE2N 488270 sc-eQTL 3.38e-02 0.2 0.0937 0.421 CD8_TCM L2
ENSG00000198015 MRPL42 462729 sc-eQTL 9.93e-01 -0.000813 0.0972 0.421 CD8_TCM L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 8.75e-01 -0.0132 0.0838 0.429 CD8_TEM L2
ENSG00000120833 SOCS2 360403 sc-eQTL 7.47e-01 -0.0289 0.0893 0.429 CD8_TEM L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 8.14e-01 0.0221 0.094 0.429 CD8_TEM L2
ENSG00000169372 CRADD 252842 sc-eQTL 1.42e-01 0.146 0.0991 0.429 CD8_TEM L2
ENSG00000173588 CEP83 -529771 sc-eQTL 2.66e-01 0.108 0.0967 0.429 CD8_TEM L2
ENSG00000173598 NUDT4 552334 sc-eQTL 6.04e-01 -0.0477 0.0917 0.429 CD8_TEM L2
ENSG00000177889 UBE2N 488270 sc-eQTL 5.91e-01 -0.0471 0.0876 0.429 CD8_TEM L2
ENSG00000198015 MRPL42 462729 sc-eQTL 5.33e-01 0.0567 0.0907 0.429 CD8_TEM L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 5.39e-01 -0.0497 0.0807 0.422 MAIT L2
ENSG00000120833 SOCS2 360403 sc-eQTL 8.61e-01 -0.0151 0.0859 0.422 MAIT L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 2.67e-02 0.174 0.0782 0.422 MAIT L2
ENSG00000169372 CRADD 252842 sc-eQTL 5.22e-01 0.0645 0.1 0.422 MAIT L2
ENSG00000173588 CEP83 -529771 sc-eQTL 2.79e-02 0.198 0.0895 0.422 MAIT L2
ENSG00000173598 NUDT4 552334 sc-eQTL 9.39e-01 0.00564 0.073 0.422 MAIT L2
ENSG00000177889 UBE2N 488270 sc-eQTL 7.11e-01 0.0332 0.0895 0.422 MAIT L2
ENSG00000198015 MRPL42 462729 sc-eQTL 3.03e-01 0.0942 0.0912 0.422 MAIT L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 9.51e-01 -0.00581 0.0953 0.427 NK_CD56bright L2
ENSG00000120833 SOCS2 360403 sc-eQTL 1.04e-01 -0.14 0.086 0.427 NK_CD56bright L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 1.64e-01 -0.117 0.0839 0.427 NK_CD56bright L2
ENSG00000169372 CRADD 252842 sc-eQTL 9.29e-01 -0.00912 0.102 0.427 NK_CD56bright L2
ENSG00000173588 CEP83 -529771 sc-eQTL 8.24e-01 -0.019 0.0853 0.427 NK_CD56bright L2
ENSG00000173598 NUDT4 552334 sc-eQTL 1.21e-01 0.141 0.0907 0.427 NK_CD56bright L2
ENSG00000177889 UBE2N 488270 sc-eQTL 9.67e-01 0.00396 0.0969 0.427 NK_CD56bright L2
ENSG00000198015 MRPL42 462729 sc-eQTL 6.66e-01 -0.0417 0.0965 0.427 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 358449 sc-eQTL 3.02e-01 -0.0928 0.0897 0.427 NK_CD56bright L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 9.85e-01 -0.00154 0.0812 0.427 NK_CD56dim L2
ENSG00000120833 SOCS2 360403 sc-eQTL 3.48e-01 -0.065 0.0691 0.427 NK_CD56dim L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 2.64e-01 0.0841 0.0751 0.427 NK_CD56dim L2
ENSG00000169372 CRADD 252842 sc-eQTL 5.04e-01 -0.0656 0.098 0.427 NK_CD56dim L2
ENSG00000173588 CEP83 -529771 sc-eQTL 1.96e-02 0.202 0.0859 0.427 NK_CD56dim L2
ENSG00000173598 NUDT4 552334 sc-eQTL 1.59e-01 0.0977 0.0692 0.427 NK_CD56dim L2
ENSG00000177889 UBE2N 488270 sc-eQTL 2.89e-01 0.0708 0.0666 0.427 NK_CD56dim L2
ENSG00000198015 MRPL42 462729 sc-eQTL 7.63e-01 -0.028 0.0925 0.427 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 358449 sc-eQTL 7.03e-01 -0.0363 0.0951 0.427 NK_CD56dim L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 6.35e-01 0.0439 0.0925 0.42 NK_HLA L2
ENSG00000120833 SOCS2 360403 sc-eQTL 8.92e-01 -0.0125 0.0917 0.42 NK_HLA L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 6.82e-01 0.0344 0.0838 0.42 NK_HLA L2
ENSG00000169372 CRADD 252842 sc-eQTL 8.67e-01 -0.0172 0.103 0.42 NK_HLA L2
ENSG00000173588 CEP83 -529771 sc-eQTL 5.89e-01 -0.052 0.0962 0.42 NK_HLA L2
ENSG00000173598 NUDT4 552334 sc-eQTL 3.22e-01 0.0851 0.0856 0.42 NK_HLA L2
ENSG00000177889 UBE2N 488270 sc-eQTL 2.71e-01 0.106 0.0959 0.42 NK_HLA L2
ENSG00000198015 MRPL42 462729 sc-eQTL 7.58e-01 -0.0331 0.107 0.42 NK_HLA L2
ENSG00000246985 SOCS2-AS1 358449 sc-eQTL 6.76e-02 -0.158 0.086 0.42 NK_HLA L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 7.94e-01 0.0232 0.0887 0.427 NK_cytokine L2
ENSG00000120833 SOCS2 360403 sc-eQTL 3.82e-01 -0.0678 0.0774 0.427 NK_cytokine L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 4.96e-01 -0.0536 0.0785 0.427 NK_cytokine L2
ENSG00000169372 CRADD 252842 sc-eQTL 4.67e-01 0.0639 0.0877 0.427 NK_cytokine L2
ENSG00000173588 CEP83 -529771 sc-eQTL 7.55e-01 -0.0282 0.0903 0.427 NK_cytokine L2
ENSG00000173598 NUDT4 552334 sc-eQTL 5.60e-01 0.0403 0.069 0.427 NK_cytokine L2
ENSG00000177889 UBE2N 488270 sc-eQTL 5.84e-01 0.0435 0.0793 0.427 NK_cytokine L2
ENSG00000198015 MRPL42 462729 sc-eQTL 3.73e-01 -0.0819 0.0918 0.427 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 358449 sc-eQTL 1.57e-01 -0.13 0.0916 0.427 NK_cytokine L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 4.02e-01 -0.0872 0.104 0.4 PB L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 2.82e-01 -0.115 0.106 0.4 PB L2
ENSG00000169372 CRADD 252842 sc-eQTL 5.18e-01 0.0636 0.0981 0.4 PB L2
ENSG00000173588 CEP83 -529771 sc-eQTL 9.99e-01 -8.06e-05 0.111 0.4 PB L2
ENSG00000173598 NUDT4 552334 sc-eQTL 6.75e-01 -0.0385 0.0918 0.4 PB L2
ENSG00000177889 UBE2N 488270 sc-eQTL 9.20e-01 0.00816 0.0809 0.4 PB L2
ENSG00000198015 MRPL42 462729 sc-eQTL 6.98e-01 -0.0432 0.111 0.4 PB L2
ENSG00000257345 LINC02413 930999 sc-eQTL 9.88e-02 -0.177 0.106 0.4 PB L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 1.46e-01 0.117 0.0804 0.422 Pro_T L2
ENSG00000120833 SOCS2 360403 sc-eQTL 2.33e-01 0.103 0.0861 0.422 Pro_T L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 3.79e-01 0.0809 0.0917 0.422 Pro_T L2
ENSG00000169372 CRADD 252842 sc-eQTL 6.03e-01 0.0468 0.0897 0.422 Pro_T L2
ENSG00000173588 CEP83 -529771 sc-eQTL 7.83e-01 -0.0251 0.091 0.422 Pro_T L2
ENSG00000173598 NUDT4 552334 sc-eQTL 1.76e-01 -0.0983 0.0724 0.422 Pro_T L2
ENSG00000177889 UBE2N 488270 sc-eQTL 9.52e-01 -0.00404 0.0671 0.422 Pro_T L2
ENSG00000198015 MRPL42 462729 sc-eQTL 6.06e-01 -0.0416 0.0805 0.422 Pro_T L2
ENSG00000120833 SOCS2 360403 sc-eQTL 9.56e-01 0.0045 0.0819 0.423 Treg L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 8.59e-01 -0.0154 0.0863 0.423 Treg L2
ENSG00000169372 CRADD 252842 sc-eQTL 2.62e-01 0.112 0.0993 0.423 Treg L2
ENSG00000173588 CEP83 -529771 sc-eQTL 4.08e-01 -0.0764 0.0922 0.423 Treg L2
ENSG00000173598 NUDT4 552334 sc-eQTL 5.87e-01 0.0384 0.0705 0.423 Treg L2
ENSG00000177889 UBE2N 488270 sc-eQTL 4.35e-01 -0.0595 0.0761 0.423 Treg L2
ENSG00000198015 MRPL42 462729 sc-eQTL 5.04e-01 0.0641 0.0957 0.423 Treg L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 6.17e-01 0.0508 0.102 0.429 cDC L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 6.35e-01 0.0421 0.0887 0.429 cDC L2
ENSG00000169372 CRADD 252842 sc-eQTL 2.76e-01 -0.107 0.0978 0.429 cDC L2
ENSG00000173588 CEP83 -529771 sc-eQTL 3.79e-01 -0.0733 0.0831 0.429 cDC L2
ENSG00000173598 NUDT4 552334 sc-eQTL 4.67e-01 0.0725 0.0996 0.429 cDC L2
ENSG00000177889 UBE2N 488270 sc-eQTL 9.44e-01 0.00615 0.0867 0.429 cDC L2
ENSG00000198015 MRPL42 462729 sc-eQTL 7.07e-01 -0.0374 0.0994 0.429 cDC L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 2.59e-01 -0.0833 0.0736 0.423 cMono_IL1B L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 3.24e-01 0.0642 0.0649 0.423 cMono_IL1B L2
ENSG00000169372 CRADD 252842 sc-eQTL 2.59e-01 -0.109 0.0965 0.423 cMono_IL1B L2
ENSG00000173588 CEP83 -529771 sc-eQTL 5.79e-01 0.0492 0.0886 0.423 cMono_IL1B L2
ENSG00000173598 NUDT4 552334 sc-eQTL 3.54e-01 0.0657 0.0707 0.423 cMono_IL1B L2
ENSG00000177889 UBE2N 488270 sc-eQTL 9.21e-01 0.00549 0.0555 0.423 cMono_IL1B L2
ENSG00000198015 MRPL42 462729 sc-eQTL 5.19e-01 -0.0496 0.0769 0.423 cMono_IL1B L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 5.31e-01 0.0525 0.0837 0.423 cMono_S100A L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 7.10e-01 -0.0254 0.0683 0.423 cMono_S100A L2
ENSG00000169372 CRADD 252842 sc-eQTL 2.31e-01 -0.125 0.104 0.423 cMono_S100A L2
ENSG00000173588 CEP83 -529771 sc-eQTL 1.22e-01 -0.149 0.0961 0.423 cMono_S100A L2
ENSG00000173598 NUDT4 552334 sc-eQTL 9.34e-01 0.00682 0.0822 0.423 cMono_S100A L2
ENSG00000177889 UBE2N 488270 sc-eQTL 1.92e-01 0.0933 0.0712 0.423 cMono_S100A L2
ENSG00000198015 MRPL42 462729 sc-eQTL 4.09e-01 -0.0677 0.0819 0.423 cMono_S100A L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 6.06e-03 0.259 0.0928 0.433 gdT L2
ENSG00000120833 SOCS2 360403 sc-eQTL 6.16e-01 -0.0576 0.115 0.433 gdT L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 3.15e-01 -0.121 0.12 0.433 gdT L2
ENSG00000169372 CRADD 252842 sc-eQTL 4.32e-02 0.237 0.116 0.433 gdT L2
ENSG00000173588 CEP83 -529771 sc-eQTL 8.57e-01 0.0213 0.117 0.433 gdT L2
ENSG00000173598 NUDT4 552334 sc-eQTL 2.59e-01 -0.126 0.112 0.433 gdT L2
ENSG00000177889 UBE2N 488270 sc-eQTL 6.43e-01 0.0569 0.123 0.433 gdT L2
ENSG00000198015 MRPL42 462729 sc-eQTL 9.09e-01 -0.0137 0.12 0.433 gdT L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 6.09e-01 0.0503 0.0981 0.424 intMono L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 7.68e-01 -0.0244 0.0828 0.424 intMono L2
ENSG00000169372 CRADD 252842 sc-eQTL 4.52e-01 -0.0718 0.0952 0.424 intMono L2
ENSG00000173588 CEP83 -529771 sc-eQTL 5.64e-01 0.0575 0.0996 0.424 intMono L2
ENSG00000173598 NUDT4 552334 sc-eQTL 9.91e-01 -0.000955 0.0868 0.424 intMono L2
ENSG00000177889 UBE2N 488270 sc-eQTL 1.79e-01 0.111 0.0823 0.424 intMono L2
ENSG00000198015 MRPL42 462729 sc-eQTL 7.36e-01 -0.0301 0.089 0.424 intMono L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 6.12e-01 -0.0444 0.0875 0.428 ncMono L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 7.22e-01 0.0215 0.0603 0.428 ncMono L2
ENSG00000169372 CRADD 252842 sc-eQTL 1.80e-01 -0.126 0.0935 0.428 ncMono L2
ENSG00000173588 CEP83 -529771 sc-eQTL 2.85e-01 0.101 0.094 0.428 ncMono L2
ENSG00000173598 NUDT4 552334 sc-eQTL 8.35e-01 -0.0172 0.0825 0.428 ncMono L2
ENSG00000177889 UBE2N 488270 sc-eQTL 3.29e-01 -0.0785 0.0802 0.428 ncMono L2
ENSG00000198015 MRPL42 462729 sc-eQTL 1.16e-01 -0.131 0.0829 0.428 ncMono L2
ENSG00000057704 TMCC3 -720340 sc-eQTL 9.27e-01 -0.0095 0.104 0.432 pDC L2
ENSG00000136040 PLXNC1 -218360 sc-eQTL 1.94e-01 0.134 0.103 0.432 pDC L2
ENSG00000169372 CRADD 252842 sc-eQTL 6.85e-01 -0.0426 0.105 0.432 pDC L2
ENSG00000173588 CEP83 -529771 sc-eQTL 3.44e-01 0.106 0.111 0.432 pDC L2
ENSG00000173598 NUDT4 552334 sc-eQTL 4.26e-01 -0.0719 0.09 0.432 pDC L2
ENSG00000177889 UBE2N 488270 sc-eQTL 5.51e-01 -0.0638 0.107 0.432 pDC L2
ENSG00000198015 MRPL42 462729 sc-eQTL 5.85e-01 -0.0605 0.11 0.432 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -720340 sc-eQTL 6.42e-01 0.0447 0.0958 0.423 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -218360 sc-eQTL 8.60e-01 -0.0103 0.058 0.423 B_Memory LOneK1K
ENSG00000169372 CRADD 252842 sc-eQTL 8.62e-02 -0.169 0.098 0.423 B_Memory LOneK1K
ENSG00000173588 CEP83 -529771 sc-eQTL 7.27e-01 0.0282 0.0809 0.423 B_Memory LOneK1K
ENSG00000173598 NUDT4 552334 sc-eQTL 9.51e-01 -0.00361 0.0583 0.423 B_Memory LOneK1K
ENSG00000177889 UBE2N 488270 sc-eQTL 3.54e-01 0.0493 0.0531 0.423 B_Memory LOneK1K
ENSG00000198015 MRPL42 462729 sc-eQTL 4.48e-01 -0.0658 0.0865 0.423 B_Memory LOneK1K
ENSG00000257345 LINC02413 930999 sc-eQTL 5.18e-01 0.0584 0.0902 0.423 B_Memory LOneK1K
ENSG00000057704 TMCC3 -720340 sc-eQTL 9.04e-01 0.0105 0.0866 0.423 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -218360 sc-eQTL 2.23e-01 -0.0857 0.07 0.423 B_Naive LOneK1K
ENSG00000169372 CRADD 252842 sc-eQTL 2.83e-01 -0.1 0.093 0.423 B_Naive LOneK1K
ENSG00000173588 CEP83 -529771 sc-eQTL 9.23e-01 -0.00706 0.0733 0.423 B_Naive LOneK1K
ENSG00000173598 NUDT4 552334 sc-eQTL 8.81e-01 0.0102 0.068 0.423 B_Naive LOneK1K
ENSG00000177889 UBE2N 488270 sc-eQTL 4.16e-01 -0.0567 0.0697 0.423 B_Naive LOneK1K
ENSG00000198015 MRPL42 462729 sc-eQTL 5.86e-01 -0.0468 0.0858 0.423 B_Naive LOneK1K
ENSG00000257345 LINC02413 930999 sc-eQTL 4.09e-01 -0.0729 0.0881 0.423 B_Naive LOneK1K
ENSG00000057704 TMCC3 -720340 sc-eQTL 9.29e-01 -0.00603 0.0679 0.423 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -218360 sc-eQTL 5.19e-01 0.0389 0.0602 0.423 CD14_Mono LOneK1K
ENSG00000169372 CRADD 252842 sc-eQTL 8.75e-02 -0.166 0.0965 0.423 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -529771 sc-eQTL 5.88e-01 -0.0445 0.082 0.423 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 552334 sc-eQTL 2.55e-01 0.0792 0.0693 0.423 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 488270 sc-eQTL 1.29e-01 0.0793 0.0521 0.423 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 462729 sc-eQTL 2.45e-01 -0.0843 0.0724 0.423 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 -720340 sc-eQTL 9.01e-01 -0.011 0.0891 0.422 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -218360 sc-eQTL 9.53e-01 -0.00338 0.0568 0.422 CD16_Mono LOneK1K
ENSG00000169372 CRADD 252842 sc-eQTL 2.38e-01 -0.121 0.102 0.422 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -529771 sc-eQTL 6.40e-01 0.0441 0.0943 0.422 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 552334 sc-eQTL 3.57e-01 -0.0707 0.0766 0.422 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 488270 sc-eQTL 9.06e-01 -0.00911 0.0769 0.422 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 462729 sc-eQTL 7.57e-02 -0.144 0.0805 0.422 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 -720340 sc-eQTL 7.23e-01 -0.0285 0.0804 0.427 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 360403 sc-eQTL 1.58e-01 -0.0884 0.0623 0.427 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -218360 sc-eQTL 2.84e-01 0.0733 0.0682 0.427 NK_CD56dim LOneK1K
ENSG00000169372 CRADD 252842 sc-eQTL 8.51e-01 0.0182 0.0967 0.427 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -529771 sc-eQTL 1.32e-01 0.116 0.0765 0.427 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 552334 sc-eQTL 5.46e-02 0.118 0.0608 0.427 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 488270 sc-eQTL 5.68e-02 0.113 0.0588 0.427 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 462729 sc-eQTL 5.00e-01 -0.0599 0.0885 0.427 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 358449 sc-eQTL 1.16e-01 -0.153 0.0968 0.427 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136040 PLXNC1 -218360 eQTL 0.022 -0.0187 0.00816 0.0 0.0 0.422
ENSG00000169372 CRADD 252842 eQTL 0.0345 -0.0286 0.0135 0.0 0.0 0.422

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000169372 CRADD 252842 1.24e-06 9.23e-07 2.75e-07 1.04e-06 1.54e-07 4.73e-07 1.28e-06 3.49e-07 1.13e-06 3.66e-07 1.38e-06 6.07e-07 1.75e-06 2.8e-07 4.55e-07 5.29e-07 7.96e-07 5.65e-07 5.34e-07 6.39e-07 4.77e-07 9.67e-07 8.52e-07 5.79e-07 1.96e-06 2.99e-07 6.7e-07 6.23e-07 1.25e-06 1.11e-06 5.42e-07 3.9e-08 2.31e-07 5.42e-07 5.95e-07 3.98e-07 4.52e-07 1.7e-07 1.83e-07 8.88e-08 2.71e-07 1.54e-06 6.65e-08 3.38e-08 1.72e-07 7.77e-08 2.33e-07 8.43e-08 8.28e-08
ENSG00000186076 \N 288631 1.2e-06 8.72e-07 1.57e-07 5.92e-07 1.11e-07 4.08e-07 8.73e-07 2.62e-07 8.08e-07 2.85e-07 1.09e-06 5.01e-07 1.35e-06 2.09e-07 3.35e-07 3.35e-07 6.15e-07 4.52e-07 3.79e-07 3.93e-07 2.97e-07 5.71e-07 6.18e-07 3.96e-07 1.69e-06 2.41e-07 5.49e-07 4.71e-07 8.4e-07 9.08e-07 4.39e-07 3.34e-08 1.21e-07 3.03e-07 4e-07 2.76e-07 3.14e-07 1.54e-07 1.12e-07 9.44e-09 1.45e-07 1.09e-06 6.28e-08 1.28e-08 1.93e-07 4.43e-08 1.78e-07 5.79e-08 4.96e-08