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Genes within 1Mb (chr12:93930102:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -720455 sc-eQTL 9.87e-01 0.00144 0.0897 0.423 B L1
ENSG00000136040 PLXNC1 -218475 sc-eQTL 6.92e-01 -0.0202 0.0508 0.423 B L1
ENSG00000169372 CRADD 252727 sc-eQTL 8.78e-02 -0.131 0.0764 0.423 B L1
ENSG00000173588 CEP83 -529886 sc-eQTL 6.86e-01 -0.026 0.0641 0.423 B L1
ENSG00000173598 NUDT4 552219 sc-eQTL 5.88e-01 0.031 0.0572 0.423 B L1
ENSG00000177889 UBE2N 488155 sc-eQTL 7.91e-01 0.0134 0.0504 0.423 B L1
ENSG00000198015 MRPL42 462614 sc-eQTL 6.78e-01 -0.0327 0.0787 0.423 B L1
ENSG00000257345 LINC02413 930884 sc-eQTL 7.07e-01 -0.0295 0.0783 0.423 B L1
ENSG00000120833 SOCS2 360288 sc-eQTL 2.38e-01 0.0613 0.0518 0.423 CD4T L1
ENSG00000136040 PLXNC1 -218475 sc-eQTL 5.14e-01 0.0356 0.0545 0.423 CD4T L1
ENSG00000169372 CRADD 252727 sc-eQTL 4.52e-01 -0.0672 0.0892 0.423 CD4T L1
ENSG00000173588 CEP83 -529886 sc-eQTL 9.78e-01 0.00161 0.0571 0.423 CD4T L1
ENSG00000173598 NUDT4 552219 sc-eQTL 3.71e-02 0.107 0.051 0.423 CD4T L1
ENSG00000177889 UBE2N 488155 sc-eQTL 3.17e-01 0.0479 0.0478 0.423 CD4T L1
ENSG00000198015 MRPL42 462614 sc-eQTL 4.00e-01 -0.07 0.0831 0.423 CD4T L1
ENSG00000057704 TMCC3 -720455 sc-eQTL 5.99e-01 0.0271 0.0515 0.423 CD8T L1
ENSG00000120833 SOCS2 360288 sc-eQTL 4.34e-01 -0.0539 0.0688 0.423 CD8T L1
ENSG00000136040 PLXNC1 -218475 sc-eQTL 3.25e-01 0.0698 0.0708 0.423 CD8T L1
ENSG00000169372 CRADD 252727 sc-eQTL 6.39e-01 0.0391 0.0834 0.423 CD8T L1
ENSG00000173588 CEP83 -529886 sc-eQTL 1.19e-01 0.103 0.0659 0.423 CD8T L1
ENSG00000173598 NUDT4 552219 sc-eQTL 6.17e-02 0.0922 0.0491 0.423 CD8T L1
ENSG00000177889 UBE2N 488155 sc-eQTL 1.86e-01 0.0815 0.0614 0.423 CD8T L1
ENSG00000198015 MRPL42 462614 sc-eQTL 3.74e-01 -0.0781 0.0877 0.423 CD8T L1
ENSG00000057704 TMCC3 -720455 sc-eQTL 2.01e-01 0.122 0.0954 0.421 DC L1
ENSG00000136040 PLXNC1 -218475 sc-eQTL 2.91e-01 0.0905 0.0855 0.421 DC L1
ENSG00000169372 CRADD 252727 sc-eQTL 3.48e-01 -0.0908 0.0966 0.421 DC L1
ENSG00000173588 CEP83 -529886 sc-eQTL 4.88e-01 -0.053 0.0763 0.421 DC L1
ENSG00000173598 NUDT4 552219 sc-eQTL 3.92e-01 -0.0681 0.0794 0.421 DC L1
ENSG00000177889 UBE2N 488155 sc-eQTL 8.60e-01 -0.0141 0.0804 0.421 DC L1
ENSG00000198015 MRPL42 462614 sc-eQTL 1.45e-01 -0.134 0.0919 0.421 DC L1
ENSG00000057704 TMCC3 -720455 sc-eQTL 6.93e-01 -0.0259 0.0655 0.423 Mono L1
ENSG00000136040 PLXNC1 -218475 sc-eQTL 5.56e-01 0.0321 0.0543 0.423 Mono L1
ENSG00000169372 CRADD 252727 sc-eQTL 6.04e-02 -0.187 0.0992 0.423 Mono L1
ENSG00000173588 CEP83 -529886 sc-eQTL 6.95e-01 -0.0315 0.0803 0.423 Mono L1
ENSG00000173598 NUDT4 552219 sc-eQTL 4.24e-01 0.0552 0.0689 0.423 Mono L1
ENSG00000177889 UBE2N 488155 sc-eQTL 2.88e-01 0.0551 0.0516 0.423 Mono L1
ENSG00000198015 MRPL42 462614 sc-eQTL 7.95e-02 -0.122 0.0692 0.423 Mono L1
ENSG00000057704 TMCC3 -720455 sc-eQTL 5.72e-01 -0.0445 0.0786 0.425 NK L1
ENSG00000120833 SOCS2 360288 sc-eQTL 2.75e-01 -0.0674 0.0615 0.425 NK L1
ENSG00000136040 PLXNC1 -218475 sc-eQTL 6.72e-01 0.0273 0.0644 0.425 NK L1
ENSG00000169372 CRADD 252727 sc-eQTL 5.51e-01 0.0552 0.0924 0.425 NK L1
ENSG00000173588 CEP83 -529886 sc-eQTL 2.32e-01 0.0875 0.073 0.425 NK L1
ENSG00000173598 NUDT4 552219 sc-eQTL 1.60e-02 0.143 0.059 0.425 NK L1
ENSG00000177889 UBE2N 488155 sc-eQTL 2.77e-02 0.13 0.0585 0.425 NK L1
ENSG00000198015 MRPL42 462614 sc-eQTL 4.05e-01 -0.0705 0.0845 0.425 NK L1
ENSG00000246985 SOCS2-AS1 358334 sc-eQTL 9.38e-02 -0.161 0.0958 0.425 NK L1
ENSG00000057704 TMCC3 -720455 sc-eQTL 1.64e-01 0.112 0.0803 0.423 Other_T L1
ENSG00000120833 SOCS2 360288 sc-eQTL 6.77e-01 -0.0331 0.0795 0.423 Other_T L1
ENSG00000136040 PLXNC1 -218475 sc-eQTL 3.59e-02 0.156 0.0738 0.423 Other_T L1
ENSG00000169372 CRADD 252727 sc-eQTL 2.13e-01 0.112 0.0899 0.423 Other_T L1
ENSG00000173588 CEP83 -529886 sc-eQTL 1.22e-01 0.129 0.0834 0.423 Other_T L1
ENSG00000173598 NUDT4 552219 sc-eQTL 6.42e-01 -0.03 0.0644 0.423 Other_T L1
ENSG00000177889 UBE2N 488155 sc-eQTL 2.72e-01 0.0656 0.0595 0.423 Other_T L1
ENSG00000198015 MRPL42 462614 sc-eQTL 4.78e-01 0.0501 0.0706 0.423 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -720455 sc-eQTL 9.54e-01 -0.00517 0.0896 0.429 B_Activated L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 6.78e-01 -0.0352 0.0846 0.429 B_Activated L2
ENSG00000169372 CRADD 252727 sc-eQTL 2.67e-01 -0.11 0.0989 0.429 B_Activated L2
ENSG00000173588 CEP83 -529886 sc-eQTL 6.32e-01 0.0505 0.105 0.429 B_Activated L2
ENSG00000173598 NUDT4 552219 sc-eQTL 9.73e-01 -0.00299 0.0884 0.429 B_Activated L2
ENSG00000177889 UBE2N 488155 sc-eQTL 7.76e-01 -0.0312 0.11 0.429 B_Activated L2
ENSG00000198015 MRPL42 462614 sc-eQTL 5.55e-01 -0.0629 0.106 0.429 B_Activated L2
ENSG00000257345 LINC02413 930884 sc-eQTL 2.64e-01 0.115 0.103 0.429 B_Activated L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 7.46e-01 0.0297 0.0913 0.423 B_Intermediate L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 5.48e-01 0.0462 0.0768 0.423 B_Intermediate L2
ENSG00000169372 CRADD 252727 sc-eQTL 5.84e-01 -0.0501 0.0913 0.423 B_Intermediate L2
ENSG00000173588 CEP83 -529886 sc-eQTL 3.83e-01 -0.0744 0.085 0.423 B_Intermediate L2
ENSG00000173598 NUDT4 552219 sc-eQTL 8.23e-01 0.0171 0.0762 0.423 B_Intermediate L2
ENSG00000177889 UBE2N 488155 sc-eQTL 9.27e-01 0.00707 0.0776 0.423 B_Intermediate L2
ENSG00000198015 MRPL42 462614 sc-eQTL 6.16e-01 -0.0475 0.0945 0.423 B_Intermediate L2
ENSG00000257345 LINC02413 930884 sc-eQTL 7.83e-01 -0.0257 0.0932 0.423 B_Intermediate L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 6.47e-02 -0.179 0.0966 0.425 B_Memory L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 4.72e-01 -0.0543 0.0753 0.425 B_Memory L2
ENSG00000169372 CRADD 252727 sc-eQTL 1.77e-01 -0.133 0.0982 0.425 B_Memory L2
ENSG00000173588 CEP83 -529886 sc-eQTL 4.97e-02 0.172 0.0872 0.425 B_Memory L2
ENSG00000173598 NUDT4 552219 sc-eQTL 9.12e-01 0.00784 0.0707 0.425 B_Memory L2
ENSG00000177889 UBE2N 488155 sc-eQTL 3.09e-01 0.0643 0.0631 0.425 B_Memory L2
ENSG00000198015 MRPL42 462614 sc-eQTL 3.50e-01 -0.0879 0.0937 0.425 B_Memory L2
ENSG00000257345 LINC02413 930884 sc-eQTL 1.10e-01 0.15 0.0933 0.425 B_Memory L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 1.39e-01 0.134 0.09 0.423 B_Naive1 L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 2.78e-01 -0.0834 0.0767 0.423 B_Naive1 L2
ENSG00000169372 CRADD 252727 sc-eQTL 1.39e-01 -0.142 0.096 0.423 B_Naive1 L2
ENSG00000173588 CEP83 -529886 sc-eQTL 8.68e-01 0.0132 0.0794 0.423 B_Naive1 L2
ENSG00000173598 NUDT4 552219 sc-eQTL 4.05e-01 0.0575 0.069 0.423 B_Naive1 L2
ENSG00000177889 UBE2N 488155 sc-eQTL 1.98e-01 -0.0956 0.074 0.423 B_Naive1 L2
ENSG00000198015 MRPL42 462614 sc-eQTL 5.01e-01 -0.0578 0.0857 0.423 B_Naive1 L2
ENSG00000257345 LINC02413 930884 sc-eQTL 2.87e-01 -0.0968 0.0907 0.423 B_Naive1 L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 1.13e-01 -0.141 0.0889 0.425 B_Naive2 L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 4.97e-01 -0.0568 0.0835 0.425 B_Naive2 L2
ENSG00000169372 CRADD 252727 sc-eQTL 8.43e-01 -0.0187 0.0942 0.425 B_Naive2 L2
ENSG00000173588 CEP83 -529886 sc-eQTL 3.57e-01 -0.0814 0.0881 0.425 B_Naive2 L2
ENSG00000173598 NUDT4 552219 sc-eQTL 5.82e-01 -0.0429 0.0778 0.425 B_Naive2 L2
ENSG00000177889 UBE2N 488155 sc-eQTL 6.20e-01 0.0379 0.0762 0.425 B_Naive2 L2
ENSG00000198015 MRPL42 462614 sc-eQTL 9.96e-01 0.000494 0.0988 0.425 B_Naive2 L2
ENSG00000257345 LINC02413 930884 sc-eQTL 3.08e-01 0.0966 0.0946 0.425 B_Naive2 L2
ENSG00000120833 SOCS2 360288 sc-eQTL 6.10e-01 -0.0491 0.0961 0.425 CD4_CTL L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 6.69e-01 0.0392 0.0916 0.425 CD4_CTL L2
ENSG00000169372 CRADD 252727 sc-eQTL 4.95e-01 0.0635 0.0929 0.425 CD4_CTL L2
ENSG00000173588 CEP83 -529886 sc-eQTL 7.67e-01 0.0278 0.0937 0.425 CD4_CTL L2
ENSG00000173598 NUDT4 552219 sc-eQTL 1.28e-02 0.225 0.0897 0.425 CD4_CTL L2
ENSG00000177889 UBE2N 488155 sc-eQTL 1.99e-01 0.119 0.0926 0.425 CD4_CTL L2
ENSG00000198015 MRPL42 462614 sc-eQTL 8.75e-01 0.0163 0.104 0.425 CD4_CTL L2
ENSG00000120833 SOCS2 360288 sc-eQTL 6.07e-02 0.101 0.0536 0.423 CD4_Naive L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 4.57e-01 0.0455 0.0611 0.423 CD4_Naive L2
ENSG00000169372 CRADD 252727 sc-eQTL 4.62e-02 -0.186 0.0925 0.423 CD4_Naive L2
ENSG00000173588 CEP83 -529886 sc-eQTL 8.84e-01 0.0097 0.0662 0.423 CD4_Naive L2
ENSG00000173598 NUDT4 552219 sc-eQTL 3.45e-02 0.116 0.0543 0.423 CD4_Naive L2
ENSG00000177889 UBE2N 488155 sc-eQTL 8.39e-01 -0.0107 0.0527 0.423 CD4_Naive L2
ENSG00000198015 MRPL42 462614 sc-eQTL 4.06e-01 -0.0736 0.0883 0.423 CD4_Naive L2
ENSG00000120833 SOCS2 360288 sc-eQTL 9.16e-01 -0.00648 0.061 0.423 CD4_TCM L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 9.99e-01 -0.000122 0.0725 0.423 CD4_TCM L2
ENSG00000169372 CRADD 252727 sc-eQTL 6.48e-01 0.0446 0.0977 0.423 CD4_TCM L2
ENSG00000173588 CEP83 -529886 sc-eQTL 5.78e-01 0.0431 0.0772 0.423 CD4_TCM L2
ENSG00000173598 NUDT4 552219 sc-eQTL 4.20e-01 0.0495 0.0612 0.423 CD4_TCM L2
ENSG00000177889 UBE2N 488155 sc-eQTL 3.60e-01 0.054 0.0588 0.423 CD4_TCM L2
ENSG00000198015 MRPL42 462614 sc-eQTL 2.81e-01 -0.0969 0.0897 0.423 CD4_TCM L2
ENSG00000120833 SOCS2 360288 sc-eQTL 6.34e-01 -0.0313 0.0656 0.423 CD4_TEM L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 9.20e-01 -0.00789 0.0786 0.423 CD4_TEM L2
ENSG00000169372 CRADD 252727 sc-eQTL 2.42e-01 -0.113 0.0965 0.423 CD4_TEM L2
ENSG00000173588 CEP83 -529886 sc-eQTL 4.86e-02 -0.174 0.0875 0.423 CD4_TEM L2
ENSG00000173598 NUDT4 552219 sc-eQTL 2.22e-01 0.0932 0.0761 0.423 CD4_TEM L2
ENSG00000177889 UBE2N 488155 sc-eQTL 3.26e-03 0.229 0.0768 0.423 CD4_TEM L2
ENSG00000198015 MRPL42 462614 sc-eQTL 2.94e-01 -0.0904 0.086 0.423 CD4_TEM L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 3.48e-01 0.0732 0.0778 0.423 CD8_CTL L2
ENSG00000120833 SOCS2 360288 sc-eQTL 3.69e-01 0.0709 0.0787 0.423 CD8_CTL L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 6.72e-01 -0.0339 0.0799 0.423 CD8_CTL L2
ENSG00000169372 CRADD 252727 sc-eQTL 1.05e-01 0.157 0.0966 0.423 CD8_CTL L2
ENSG00000173588 CEP83 -529886 sc-eQTL 7.13e-03 0.235 0.0866 0.423 CD8_CTL L2
ENSG00000173598 NUDT4 552219 sc-eQTL 1.67e-01 0.0993 0.0717 0.423 CD8_CTL L2
ENSG00000177889 UBE2N 488155 sc-eQTL 9.48e-01 -0.00541 0.0836 0.423 CD8_CTL L2
ENSG00000198015 MRPL42 462614 sc-eQTL 6.53e-01 -0.0432 0.0958 0.423 CD8_CTL L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 8.54e-01 0.0131 0.0707 0.423 CD8_Naive L2
ENSG00000120833 SOCS2 360288 sc-eQTL 2.22e-01 -0.0905 0.0739 0.423 CD8_Naive L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 2.48e-01 0.096 0.0828 0.423 CD8_Naive L2
ENSG00000169372 CRADD 252727 sc-eQTL 4.53e-01 -0.0721 0.096 0.423 CD8_Naive L2
ENSG00000173588 CEP83 -529886 sc-eQTL 4.81e-01 0.0564 0.08 0.423 CD8_Naive L2
ENSG00000173598 NUDT4 552219 sc-eQTL 4.68e-02 0.132 0.0659 0.423 CD8_Naive L2
ENSG00000177889 UBE2N 488155 sc-eQTL 1.37e-01 0.108 0.0721 0.423 CD8_Naive L2
ENSG00000198015 MRPL42 462614 sc-eQTL 5.23e-02 -0.179 0.0918 0.423 CD8_Naive L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 8.67e-01 0.0127 0.0758 0.421 CD8_TCM L2
ENSG00000120833 SOCS2 360288 sc-eQTL 8.92e-01 0.0115 0.0844 0.421 CD8_TCM L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 1.41e-01 0.14 0.0944 0.421 CD8_TCM L2
ENSG00000169372 CRADD 252727 sc-eQTL 5.88e-01 -0.0544 0.1 0.421 CD8_TCM L2
ENSG00000173588 CEP83 -529886 sc-eQTL 6.18e-02 -0.181 0.0966 0.421 CD8_TCM L2
ENSG00000173598 NUDT4 552219 sc-eQTL 4.74e-01 -0.0571 0.0796 0.421 CD8_TCM L2
ENSG00000177889 UBE2N 488155 sc-eQTL 3.38e-02 0.2 0.0937 0.421 CD8_TCM L2
ENSG00000198015 MRPL42 462614 sc-eQTL 9.93e-01 -0.000813 0.0972 0.421 CD8_TCM L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 8.75e-01 -0.0132 0.0838 0.429 CD8_TEM L2
ENSG00000120833 SOCS2 360288 sc-eQTL 7.47e-01 -0.0289 0.0893 0.429 CD8_TEM L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 8.14e-01 0.0221 0.094 0.429 CD8_TEM L2
ENSG00000169372 CRADD 252727 sc-eQTL 1.42e-01 0.146 0.0991 0.429 CD8_TEM L2
ENSG00000173588 CEP83 -529886 sc-eQTL 2.66e-01 0.108 0.0967 0.429 CD8_TEM L2
ENSG00000173598 NUDT4 552219 sc-eQTL 6.04e-01 -0.0477 0.0917 0.429 CD8_TEM L2
ENSG00000177889 UBE2N 488155 sc-eQTL 5.91e-01 -0.0471 0.0876 0.429 CD8_TEM L2
ENSG00000198015 MRPL42 462614 sc-eQTL 5.33e-01 0.0567 0.0907 0.429 CD8_TEM L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 5.39e-01 -0.0497 0.0807 0.422 MAIT L2
ENSG00000120833 SOCS2 360288 sc-eQTL 8.61e-01 -0.0151 0.0859 0.422 MAIT L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 2.67e-02 0.174 0.0782 0.422 MAIT L2
ENSG00000169372 CRADD 252727 sc-eQTL 5.22e-01 0.0645 0.1 0.422 MAIT L2
ENSG00000173588 CEP83 -529886 sc-eQTL 2.79e-02 0.198 0.0895 0.422 MAIT L2
ENSG00000173598 NUDT4 552219 sc-eQTL 9.39e-01 0.00564 0.073 0.422 MAIT L2
ENSG00000177889 UBE2N 488155 sc-eQTL 7.11e-01 0.0332 0.0895 0.422 MAIT L2
ENSG00000198015 MRPL42 462614 sc-eQTL 3.03e-01 0.0942 0.0912 0.422 MAIT L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 9.51e-01 -0.00581 0.0953 0.427 NK_CD56bright L2
ENSG00000120833 SOCS2 360288 sc-eQTL 1.04e-01 -0.14 0.086 0.427 NK_CD56bright L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 1.64e-01 -0.117 0.0839 0.427 NK_CD56bright L2
ENSG00000169372 CRADD 252727 sc-eQTL 9.29e-01 -0.00912 0.102 0.427 NK_CD56bright L2
ENSG00000173588 CEP83 -529886 sc-eQTL 8.24e-01 -0.019 0.0853 0.427 NK_CD56bright L2
ENSG00000173598 NUDT4 552219 sc-eQTL 1.21e-01 0.141 0.0907 0.427 NK_CD56bright L2
ENSG00000177889 UBE2N 488155 sc-eQTL 9.67e-01 0.00396 0.0969 0.427 NK_CD56bright L2
ENSG00000198015 MRPL42 462614 sc-eQTL 6.66e-01 -0.0417 0.0965 0.427 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 358334 sc-eQTL 3.02e-01 -0.0928 0.0897 0.427 NK_CD56bright L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 9.85e-01 -0.00154 0.0812 0.427 NK_CD56dim L2
ENSG00000120833 SOCS2 360288 sc-eQTL 3.48e-01 -0.065 0.0691 0.427 NK_CD56dim L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 2.64e-01 0.0841 0.0751 0.427 NK_CD56dim L2
ENSG00000169372 CRADD 252727 sc-eQTL 5.04e-01 -0.0656 0.098 0.427 NK_CD56dim L2
ENSG00000173588 CEP83 -529886 sc-eQTL 1.96e-02 0.202 0.0859 0.427 NK_CD56dim L2
ENSG00000173598 NUDT4 552219 sc-eQTL 1.59e-01 0.0977 0.0692 0.427 NK_CD56dim L2
ENSG00000177889 UBE2N 488155 sc-eQTL 2.89e-01 0.0708 0.0666 0.427 NK_CD56dim L2
ENSG00000198015 MRPL42 462614 sc-eQTL 7.63e-01 -0.028 0.0925 0.427 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 358334 sc-eQTL 7.03e-01 -0.0363 0.0951 0.427 NK_CD56dim L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 6.35e-01 0.0439 0.0925 0.42 NK_HLA L2
ENSG00000120833 SOCS2 360288 sc-eQTL 8.92e-01 -0.0125 0.0917 0.42 NK_HLA L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 6.82e-01 0.0344 0.0838 0.42 NK_HLA L2
ENSG00000169372 CRADD 252727 sc-eQTL 8.67e-01 -0.0172 0.103 0.42 NK_HLA L2
ENSG00000173588 CEP83 -529886 sc-eQTL 5.89e-01 -0.052 0.0962 0.42 NK_HLA L2
ENSG00000173598 NUDT4 552219 sc-eQTL 3.22e-01 0.0851 0.0856 0.42 NK_HLA L2
ENSG00000177889 UBE2N 488155 sc-eQTL 2.71e-01 0.106 0.0959 0.42 NK_HLA L2
ENSG00000198015 MRPL42 462614 sc-eQTL 7.58e-01 -0.0331 0.107 0.42 NK_HLA L2
ENSG00000246985 SOCS2-AS1 358334 sc-eQTL 6.76e-02 -0.158 0.086 0.42 NK_HLA L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 7.94e-01 0.0232 0.0887 0.427 NK_cytokine L2
ENSG00000120833 SOCS2 360288 sc-eQTL 3.82e-01 -0.0678 0.0774 0.427 NK_cytokine L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 4.96e-01 -0.0536 0.0785 0.427 NK_cytokine L2
ENSG00000169372 CRADD 252727 sc-eQTL 4.67e-01 0.0639 0.0877 0.427 NK_cytokine L2
ENSG00000173588 CEP83 -529886 sc-eQTL 7.55e-01 -0.0282 0.0903 0.427 NK_cytokine L2
ENSG00000173598 NUDT4 552219 sc-eQTL 5.60e-01 0.0403 0.069 0.427 NK_cytokine L2
ENSG00000177889 UBE2N 488155 sc-eQTL 5.84e-01 0.0435 0.0793 0.427 NK_cytokine L2
ENSG00000198015 MRPL42 462614 sc-eQTL 3.73e-01 -0.0819 0.0918 0.427 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 358334 sc-eQTL 1.57e-01 -0.13 0.0916 0.427 NK_cytokine L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 4.02e-01 -0.0872 0.104 0.4 PB L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 2.82e-01 -0.115 0.106 0.4 PB L2
ENSG00000169372 CRADD 252727 sc-eQTL 5.18e-01 0.0636 0.0981 0.4 PB L2
ENSG00000173588 CEP83 -529886 sc-eQTL 9.99e-01 -8.06e-05 0.111 0.4 PB L2
ENSG00000173598 NUDT4 552219 sc-eQTL 6.75e-01 -0.0385 0.0918 0.4 PB L2
ENSG00000177889 UBE2N 488155 sc-eQTL 9.20e-01 0.00816 0.0809 0.4 PB L2
ENSG00000198015 MRPL42 462614 sc-eQTL 6.98e-01 -0.0432 0.111 0.4 PB L2
ENSG00000257345 LINC02413 930884 sc-eQTL 9.88e-02 -0.177 0.106 0.4 PB L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 1.46e-01 0.117 0.0804 0.422 Pro_T L2
ENSG00000120833 SOCS2 360288 sc-eQTL 2.33e-01 0.103 0.0861 0.422 Pro_T L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 3.79e-01 0.0809 0.0917 0.422 Pro_T L2
ENSG00000169372 CRADD 252727 sc-eQTL 6.03e-01 0.0468 0.0897 0.422 Pro_T L2
ENSG00000173588 CEP83 -529886 sc-eQTL 7.83e-01 -0.0251 0.091 0.422 Pro_T L2
ENSG00000173598 NUDT4 552219 sc-eQTL 1.76e-01 -0.0983 0.0724 0.422 Pro_T L2
ENSG00000177889 UBE2N 488155 sc-eQTL 9.52e-01 -0.00404 0.0671 0.422 Pro_T L2
ENSG00000198015 MRPL42 462614 sc-eQTL 6.06e-01 -0.0416 0.0805 0.422 Pro_T L2
ENSG00000120833 SOCS2 360288 sc-eQTL 9.56e-01 0.0045 0.0819 0.423 Treg L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 8.59e-01 -0.0154 0.0863 0.423 Treg L2
ENSG00000169372 CRADD 252727 sc-eQTL 2.62e-01 0.112 0.0993 0.423 Treg L2
ENSG00000173588 CEP83 -529886 sc-eQTL 4.08e-01 -0.0764 0.0922 0.423 Treg L2
ENSG00000173598 NUDT4 552219 sc-eQTL 5.87e-01 0.0384 0.0705 0.423 Treg L2
ENSG00000177889 UBE2N 488155 sc-eQTL 4.35e-01 -0.0595 0.0761 0.423 Treg L2
ENSG00000198015 MRPL42 462614 sc-eQTL 5.04e-01 0.0641 0.0957 0.423 Treg L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 6.17e-01 0.0508 0.102 0.429 cDC L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 6.35e-01 0.0421 0.0887 0.429 cDC L2
ENSG00000169372 CRADD 252727 sc-eQTL 2.76e-01 -0.107 0.0978 0.429 cDC L2
ENSG00000173588 CEP83 -529886 sc-eQTL 3.79e-01 -0.0733 0.0831 0.429 cDC L2
ENSG00000173598 NUDT4 552219 sc-eQTL 4.67e-01 0.0725 0.0996 0.429 cDC L2
ENSG00000177889 UBE2N 488155 sc-eQTL 9.44e-01 0.00615 0.0867 0.429 cDC L2
ENSG00000198015 MRPL42 462614 sc-eQTL 7.07e-01 -0.0374 0.0994 0.429 cDC L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 2.59e-01 -0.0833 0.0736 0.423 cMono_IL1B L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 3.24e-01 0.0642 0.0649 0.423 cMono_IL1B L2
ENSG00000169372 CRADD 252727 sc-eQTL 2.59e-01 -0.109 0.0965 0.423 cMono_IL1B L2
ENSG00000173588 CEP83 -529886 sc-eQTL 5.79e-01 0.0492 0.0886 0.423 cMono_IL1B L2
ENSG00000173598 NUDT4 552219 sc-eQTL 3.54e-01 0.0657 0.0707 0.423 cMono_IL1B L2
ENSG00000177889 UBE2N 488155 sc-eQTL 9.21e-01 0.00549 0.0555 0.423 cMono_IL1B L2
ENSG00000198015 MRPL42 462614 sc-eQTL 5.19e-01 -0.0496 0.0769 0.423 cMono_IL1B L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 5.31e-01 0.0525 0.0837 0.423 cMono_S100A L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 7.10e-01 -0.0254 0.0683 0.423 cMono_S100A L2
ENSG00000169372 CRADD 252727 sc-eQTL 2.31e-01 -0.125 0.104 0.423 cMono_S100A L2
ENSG00000173588 CEP83 -529886 sc-eQTL 1.22e-01 -0.149 0.0961 0.423 cMono_S100A L2
ENSG00000173598 NUDT4 552219 sc-eQTL 9.34e-01 0.00682 0.0822 0.423 cMono_S100A L2
ENSG00000177889 UBE2N 488155 sc-eQTL 1.92e-01 0.0933 0.0712 0.423 cMono_S100A L2
ENSG00000198015 MRPL42 462614 sc-eQTL 4.09e-01 -0.0677 0.0819 0.423 cMono_S100A L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 6.06e-03 0.259 0.0928 0.433 gdT L2
ENSG00000120833 SOCS2 360288 sc-eQTL 6.16e-01 -0.0576 0.115 0.433 gdT L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 3.15e-01 -0.121 0.12 0.433 gdT L2
ENSG00000169372 CRADD 252727 sc-eQTL 4.32e-02 0.237 0.116 0.433 gdT L2
ENSG00000173588 CEP83 -529886 sc-eQTL 8.57e-01 0.0213 0.117 0.433 gdT L2
ENSG00000173598 NUDT4 552219 sc-eQTL 2.59e-01 -0.126 0.112 0.433 gdT L2
ENSG00000177889 UBE2N 488155 sc-eQTL 6.43e-01 0.0569 0.123 0.433 gdT L2
ENSG00000198015 MRPL42 462614 sc-eQTL 9.09e-01 -0.0137 0.12 0.433 gdT L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 6.09e-01 0.0503 0.0981 0.424 intMono L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 7.68e-01 -0.0244 0.0828 0.424 intMono L2
ENSG00000169372 CRADD 252727 sc-eQTL 4.52e-01 -0.0718 0.0952 0.424 intMono L2
ENSG00000173588 CEP83 -529886 sc-eQTL 5.64e-01 0.0575 0.0996 0.424 intMono L2
ENSG00000173598 NUDT4 552219 sc-eQTL 9.91e-01 -0.000955 0.0868 0.424 intMono L2
ENSG00000177889 UBE2N 488155 sc-eQTL 1.79e-01 0.111 0.0823 0.424 intMono L2
ENSG00000198015 MRPL42 462614 sc-eQTL 7.36e-01 -0.0301 0.089 0.424 intMono L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 6.12e-01 -0.0444 0.0875 0.428 ncMono L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 7.22e-01 0.0215 0.0603 0.428 ncMono L2
ENSG00000169372 CRADD 252727 sc-eQTL 1.80e-01 -0.126 0.0935 0.428 ncMono L2
ENSG00000173588 CEP83 -529886 sc-eQTL 2.85e-01 0.101 0.094 0.428 ncMono L2
ENSG00000173598 NUDT4 552219 sc-eQTL 8.35e-01 -0.0172 0.0825 0.428 ncMono L2
ENSG00000177889 UBE2N 488155 sc-eQTL 3.29e-01 -0.0785 0.0802 0.428 ncMono L2
ENSG00000198015 MRPL42 462614 sc-eQTL 1.16e-01 -0.131 0.0829 0.428 ncMono L2
ENSG00000057704 TMCC3 -720455 sc-eQTL 9.27e-01 -0.0095 0.104 0.432 pDC L2
ENSG00000136040 PLXNC1 -218475 sc-eQTL 1.94e-01 0.134 0.103 0.432 pDC L2
ENSG00000169372 CRADD 252727 sc-eQTL 6.85e-01 -0.0426 0.105 0.432 pDC L2
ENSG00000173588 CEP83 -529886 sc-eQTL 3.44e-01 0.106 0.111 0.432 pDC L2
ENSG00000173598 NUDT4 552219 sc-eQTL 4.26e-01 -0.0719 0.09 0.432 pDC L2
ENSG00000177889 UBE2N 488155 sc-eQTL 5.51e-01 -0.0638 0.107 0.432 pDC L2
ENSG00000198015 MRPL42 462614 sc-eQTL 5.85e-01 -0.0605 0.11 0.432 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000057704 TMCC3 -720455 sc-eQTL 6.42e-01 0.0447 0.0958 0.423 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -218475 sc-eQTL 8.60e-01 -0.0103 0.058 0.423 B_Memory LOneK1K
ENSG00000169372 CRADD 252727 sc-eQTL 8.62e-02 -0.169 0.098 0.423 B_Memory LOneK1K
ENSG00000173588 CEP83 -529886 sc-eQTL 7.27e-01 0.0282 0.0809 0.423 B_Memory LOneK1K
ENSG00000173598 NUDT4 552219 sc-eQTL 9.51e-01 -0.00361 0.0583 0.423 B_Memory LOneK1K
ENSG00000177889 UBE2N 488155 sc-eQTL 3.54e-01 0.0493 0.0531 0.423 B_Memory LOneK1K
ENSG00000198015 MRPL42 462614 sc-eQTL 4.48e-01 -0.0658 0.0865 0.423 B_Memory LOneK1K
ENSG00000257345 LINC02413 930884 sc-eQTL 5.18e-01 0.0584 0.0902 0.423 B_Memory LOneK1K
ENSG00000057704 TMCC3 -720455 sc-eQTL 9.04e-01 0.0105 0.0866 0.423 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -218475 sc-eQTL 2.23e-01 -0.0857 0.07 0.423 B_Naive LOneK1K
ENSG00000169372 CRADD 252727 sc-eQTL 2.83e-01 -0.1 0.093 0.423 B_Naive LOneK1K
ENSG00000173588 CEP83 -529886 sc-eQTL 9.23e-01 -0.00706 0.0733 0.423 B_Naive LOneK1K
ENSG00000173598 NUDT4 552219 sc-eQTL 8.81e-01 0.0102 0.068 0.423 B_Naive LOneK1K
ENSG00000177889 UBE2N 488155 sc-eQTL 4.16e-01 -0.0567 0.0697 0.423 B_Naive LOneK1K
ENSG00000198015 MRPL42 462614 sc-eQTL 5.86e-01 -0.0468 0.0858 0.423 B_Naive LOneK1K
ENSG00000257345 LINC02413 930884 sc-eQTL 4.09e-01 -0.0729 0.0881 0.423 B_Naive LOneK1K
ENSG00000057704 TMCC3 -720455 sc-eQTL 9.29e-01 -0.00603 0.0679 0.423 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -218475 sc-eQTL 5.19e-01 0.0389 0.0602 0.423 CD14_Mono LOneK1K
ENSG00000169372 CRADD 252727 sc-eQTL 8.75e-02 -0.166 0.0965 0.423 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -529886 sc-eQTL 5.88e-01 -0.0445 0.082 0.423 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 552219 sc-eQTL 2.55e-01 0.0792 0.0693 0.423 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 488155 sc-eQTL 1.29e-01 0.0793 0.0521 0.423 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 462614 sc-eQTL 2.45e-01 -0.0843 0.0724 0.423 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 -720455 sc-eQTL 9.01e-01 -0.011 0.0891 0.422 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -218475 sc-eQTL 9.53e-01 -0.00338 0.0568 0.422 CD16_Mono LOneK1K
ENSG00000169372 CRADD 252727 sc-eQTL 2.38e-01 -0.121 0.102 0.422 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -529886 sc-eQTL 6.40e-01 0.0441 0.0943 0.422 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 552219 sc-eQTL 3.57e-01 -0.0707 0.0766 0.422 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 488155 sc-eQTL 9.06e-01 -0.00911 0.0769 0.422 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 462614 sc-eQTL 7.57e-02 -0.144 0.0805 0.422 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 -720455 sc-eQTL 7.23e-01 -0.0285 0.0804 0.427 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 360288 sc-eQTL 1.58e-01 -0.0884 0.0623 0.427 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -218475 sc-eQTL 2.84e-01 0.0733 0.0682 0.427 NK_CD56dim LOneK1K
ENSG00000169372 CRADD 252727 sc-eQTL 8.51e-01 0.0182 0.0967 0.427 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -529886 sc-eQTL 1.32e-01 0.116 0.0765 0.427 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 552219 sc-eQTL 5.46e-02 0.118 0.0608 0.427 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 488155 sc-eQTL 5.68e-02 0.113 0.0588 0.427 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 462614 sc-eQTL 5.00e-01 -0.0599 0.0885 0.427 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 358334 sc-eQTL 1.16e-01 -0.153 0.0968 0.427 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136040 PLXNC1 -218475 eQTL 0.0291 -0.0179 0.00817 0.0 0.0 0.424
ENSG00000169372 CRADD 252727 eQTL 0.0295 -0.0294 0.0135 0.0 0.0 0.424

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000169372 CRADD 252727 1.24e-06 1.29e-06 3.29e-07 1.35e-06 2.66e-07 6.17e-07 1.53e-06 3.46e-07 1.41e-06 4.32e-07 1.84e-06 6.01e-07 2.67e-06 2.82e-07 5.65e-07 7.13e-07 9.23e-07 6.8e-07 8.15e-07 5.05e-07 6.36e-07 1.6e-06 8.37e-07 5.54e-07 2.25e-06 3.75e-07 7.61e-07 7.08e-07 1.47e-06 1.31e-06 7.8e-07 1.85e-07 2.02e-07 6.19e-07 6.04e-07 4.44e-07 7.1e-07 2.15e-07 4.94e-07 2.04e-07 2.88e-07 2.09e-06 6.94e-08 1.31e-07 1.74e-07 1.25e-07 1.78e-07 8.37e-08 1.18e-07
ENSG00000186076 \N 288516 1.29e-06 9.39e-07 2.72e-07 1.28e-06 1.81e-07 5.15e-07 1.21e-06 2.71e-07 1.11e-06 3.46e-07 1.38e-06 5.73e-07 2.31e-06 2.73e-07 4.19e-07 4.53e-07 7.88e-07 5.48e-07 6.68e-07 6.86e-07 3.61e-07 1.05e-06 7.79e-07 6.1e-07 1.97e-06 2.44e-07 6.03e-07 5.61e-07 1.12e-06 1.36e-06 5.72e-07 4.99e-08 1.78e-07 6.99e-07 5.6e-07 3.98e-07 6.19e-07 1.4e-07 4.53e-07 2.8e-07 3.02e-07 1.56e-06 6.18e-08 9.64e-08 1.72e-07 7.91e-08 1.19e-07 8.51e-08 9.13e-08