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Genes within 1Mb (chr12:93624329:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 694998 sc-eQTL 7.08e-02 0.0918 0.0505 0.327 B L1
ENSG00000136040 PLXNC1 -524248 sc-eQTL 6.65e-01 0.0219 0.0505 0.327 B L1
ENSG00000169372 CRADD -53046 sc-eQTL 8.39e-01 -0.0156 0.0764 0.327 B L1
ENSG00000173588 CEP83 -835659 sc-eQTL 4.32e-01 0.0501 0.0636 0.327 B L1
ENSG00000173598 NUDT4 246446 sc-eQTL 5.83e-01 0.0312 0.0568 0.327 B L1
ENSG00000177889 UBE2N 182382 sc-eQTL 9.51e-02 0.0835 0.0498 0.327 B L1
ENSG00000187510 C12orf74 921486 sc-eQTL 1.12e-01 0.0898 0.0562 0.327 B L1
ENSG00000198015 MRPL42 156841 sc-eQTL 5.67e-01 -0.0448 0.0782 0.327 B L1
ENSG00000257345 LINC02413 625111 sc-eQTL 7.29e-02 -0.139 0.0772 0.327 B L1
ENSG00000102189 EEA1 694998 sc-eQTL 6.16e-01 0.0262 0.0522 0.327 CD4T L1
ENSG00000120833 SOCS2 54515 sc-eQTL 7.45e-01 -0.0164 0.0505 0.327 CD4T L1
ENSG00000136040 PLXNC1 -524248 sc-eQTL 9.08e-01 -0.00611 0.053 0.327 CD4T L1
ENSG00000169372 CRADD -53046 sc-eQTL 5.67e-01 0.0498 0.0868 0.327 CD4T L1
ENSG00000173588 CEP83 -835659 sc-eQTL 1.66e-01 0.0768 0.0553 0.327 CD4T L1
ENSG00000173598 NUDT4 246446 sc-eQTL 2.98e-01 0.0522 0.05 0.327 CD4T L1
ENSG00000177889 UBE2N 182382 sc-eQTL 4.32e-01 0.0366 0.0465 0.327 CD4T L1
ENSG00000198015 MRPL42 156841 sc-eQTL 9.64e-01 0.0037 0.081 0.327 CD4T L1
ENSG00000102189 EEA1 694998 sc-eQTL 9.03e-01 0.00713 0.0586 0.327 CD8T L1
ENSG00000120833 SOCS2 54515 sc-eQTL 7.02e-01 0.0257 0.0673 0.327 CD8T L1
ENSG00000136040 PLXNC1 -524248 sc-eQTL 1.21e-01 -0.107 0.0689 0.327 CD8T L1
ENSG00000169372 CRADD -53046 sc-eQTL 7.02e-01 0.0312 0.0815 0.327 CD8T L1
ENSG00000173588 CEP83 -835659 sc-eQTL 3.97e-01 0.0549 0.0646 0.327 CD8T L1
ENSG00000173598 NUDT4 246446 sc-eQTL 2.02e-01 0.0617 0.0482 0.327 CD8T L1
ENSG00000177889 UBE2N 182382 sc-eQTL 9.20e-02 0.101 0.0598 0.327 CD8T L1
ENSG00000198015 MRPL42 156841 sc-eQTL 8.58e-01 0.0154 0.0858 0.327 CD8T L1
ENSG00000102189 EEA1 694998 sc-eQTL 9.39e-01 0.00618 0.0808 0.324 DC L1
ENSG00000136040 PLXNC1 -524248 sc-eQTL 2.66e-01 0.0971 0.087 0.324 DC L1
ENSG00000169372 CRADD -53046 sc-eQTL 9.74e-01 0.00316 0.0985 0.324 DC L1
ENSG00000173588 CEP83 -835659 sc-eQTL 9.94e-01 0.000621 0.0777 0.324 DC L1
ENSG00000173598 NUDT4 246446 sc-eQTL 7.04e-01 0.0308 0.0809 0.324 DC L1
ENSG00000177889 UBE2N 182382 sc-eQTL 2.82e-01 0.0879 0.0816 0.324 DC L1
ENSG00000198015 MRPL42 156841 sc-eQTL 4.05e-01 0.0783 0.0938 0.324 DC L1
ENSG00000102189 EEA1 694998 sc-eQTL 4.16e-01 -0.0383 0.047 0.327 Mono L1
ENSG00000136040 PLXNC1 -524248 sc-eQTL 5.03e-01 0.036 0.0537 0.327 Mono L1
ENSG00000169372 CRADD -53046 sc-eQTL 9.81e-01 -0.0023 0.0989 0.327 Mono L1
ENSG00000173588 CEP83 -835659 sc-eQTL 4.43e-01 0.061 0.0793 0.327 Mono L1
ENSG00000173598 NUDT4 246446 sc-eQTL 6.18e-01 -0.034 0.0681 0.327 Mono L1
ENSG00000177889 UBE2N 182382 sc-eQTL 1.27e-01 0.0779 0.0509 0.327 Mono L1
ENSG00000198015 MRPL42 156841 sc-eQTL 6.73e-01 -0.0291 0.0688 0.327 Mono L1
ENSG00000102189 EEA1 694998 sc-eQTL 1.88e-01 0.0858 0.065 0.326 NK L1
ENSG00000120833 SOCS2 54515 sc-eQTL 2.48e-01 -0.0705 0.0608 0.326 NK L1
ENSG00000136040 PLXNC1 -524248 sc-eQTL 1.31e-01 -0.096 0.0634 0.326 NK L1
ENSG00000169372 CRADD -53046 sc-eQTL 7.65e-01 -0.0274 0.0914 0.326 NK L1
ENSG00000173588 CEP83 -835659 sc-eQTL 7.84e-01 0.0198 0.0724 0.326 NK L1
ENSG00000173598 NUDT4 246446 sc-eQTL 5.54e-01 0.035 0.0591 0.326 NK L1
ENSG00000177889 UBE2N 182382 sc-eQTL 7.92e-01 0.0155 0.0586 0.326 NK L1
ENSG00000198015 MRPL42 156841 sc-eQTL 2.72e-01 0.0919 0.0834 0.326 NK L1
ENSG00000246985 SOCS2-AS1 52561 sc-eQTL 7.67e-01 0.0283 0.0953 0.326 NK L1
ENSG00000102189 EEA1 694998 sc-eQTL 9.33e-01 0.00692 0.0828 0.327 Other_T L1
ENSG00000120833 SOCS2 54515 sc-eQTL 3.90e-01 0.066 0.0766 0.327 Other_T L1
ENSG00000136040 PLXNC1 -524248 sc-eQTL 6.92e-01 -0.0286 0.072 0.327 Other_T L1
ENSG00000169372 CRADD -53046 sc-eQTL 7.45e-01 0.0284 0.0871 0.327 Other_T L1
ENSG00000173588 CEP83 -835659 sc-eQTL 7.10e-01 -0.0301 0.081 0.327 Other_T L1
ENSG00000173598 NUDT4 246446 sc-eQTL 6.05e-01 -0.0322 0.0622 0.327 Other_T L1
ENSG00000177889 UBE2N 182382 sc-eQTL 5.46e-02 0.11 0.0572 0.327 Other_T L1
ENSG00000198015 MRPL42 156841 sc-eQTL 2.28e-01 0.0821 0.068 0.327 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 694998 sc-eQTL 7.35e-02 0.179 0.0995 0.319 B_Activated L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 5.90e-01 -0.0457 0.0846 0.319 B_Activated L2
ENSG00000169372 CRADD -53046 sc-eQTL 5.42e-01 0.0606 0.0992 0.319 B_Activated L2
ENSG00000173588 CEP83 -835659 sc-eQTL 4.41e-01 -0.0812 0.105 0.319 B_Activated L2
ENSG00000173598 NUDT4 246446 sc-eQTL 5.28e-01 0.0559 0.0883 0.319 B_Activated L2
ENSG00000177889 UBE2N 182382 sc-eQTL 5.74e-01 0.0618 0.11 0.319 B_Activated L2
ENSG00000187510 C12orf74 921486 sc-eQTL 4.21e-01 0.0747 0.0925 0.319 B_Activated L2
ENSG00000198015 MRPL42 156841 sc-eQTL 4.30e-01 -0.0841 0.106 0.319 B_Activated L2
ENSG00000257345 LINC02413 625111 sc-eQTL 9.66e-01 0.00436 0.103 0.319 B_Activated L2
ENSG00000102189 EEA1 694998 sc-eQTL 4.73e-01 0.0568 0.0789 0.328 B_Intermediate L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 7.54e-01 0.0246 0.0783 0.328 B_Intermediate L2
ENSG00000169372 CRADD -53046 sc-eQTL 6.81e-01 0.0383 0.093 0.328 B_Intermediate L2
ENSG00000173588 CEP83 -835659 sc-eQTL 8.84e-01 -0.0127 0.0868 0.328 B_Intermediate L2
ENSG00000173598 NUDT4 246446 sc-eQTL 5.32e-01 0.0485 0.0775 0.328 B_Intermediate L2
ENSG00000177889 UBE2N 182382 sc-eQTL 9.03e-02 0.133 0.0785 0.328 B_Intermediate L2
ENSG00000187510 C12orf74 921486 sc-eQTL 4.96e-02 0.171 0.0867 0.328 B_Intermediate L2
ENSG00000198015 MRPL42 156841 sc-eQTL 2.58e-01 -0.109 0.096 0.328 B_Intermediate L2
ENSG00000257345 LINC02413 625111 sc-eQTL 9.12e-01 0.0106 0.095 0.328 B_Intermediate L2
ENSG00000102189 EEA1 694998 sc-eQTL 3.41e-03 0.234 0.0791 0.325 B_Memory L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 1.11e-01 0.121 0.0755 0.325 B_Memory L2
ENSG00000169372 CRADD -53046 sc-eQTL 5.56e-01 -0.0586 0.0992 0.325 B_Memory L2
ENSG00000173588 CEP83 -835659 sc-eQTL 7.65e-01 0.0265 0.0885 0.325 B_Memory L2
ENSG00000173598 NUDT4 246446 sc-eQTL 5.91e-01 0.0383 0.0711 0.325 B_Memory L2
ENSG00000177889 UBE2N 182382 sc-eQTL 7.50e-01 0.0203 0.0636 0.325 B_Memory L2
ENSG00000187510 C12orf74 921486 sc-eQTL 1.10e-01 0.129 0.0806 0.325 B_Memory L2
ENSG00000198015 MRPL42 156841 sc-eQTL 9.01e-01 -0.0118 0.0946 0.325 B_Memory L2
ENSG00000257345 LINC02413 625111 sc-eQTL 4.27e-01 -0.0751 0.0944 0.325 B_Memory L2
ENSG00000102189 EEA1 694998 sc-eQTL 8.64e-01 0.0127 0.0741 0.327 B_Naive1 L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 6.25e-01 -0.0376 0.0769 0.327 B_Naive1 L2
ENSG00000169372 CRADD -53046 sc-eQTL 6.76e-01 0.0404 0.0966 0.327 B_Naive1 L2
ENSG00000173588 CEP83 -835659 sc-eQTL 4.23e-01 0.0637 0.0794 0.327 B_Naive1 L2
ENSG00000173598 NUDT4 246446 sc-eQTL 7.30e-01 0.0239 0.0691 0.327 B_Naive1 L2
ENSG00000177889 UBE2N 182382 sc-eQTL 3.46e-01 0.0701 0.0742 0.327 B_Naive1 L2
ENSG00000187510 C12orf74 921486 sc-eQTL 9.64e-01 0.00375 0.0821 0.327 B_Naive1 L2
ENSG00000198015 MRPL42 156841 sc-eQTL 4.09e-01 -0.0708 0.0857 0.327 B_Naive1 L2
ENSG00000257345 LINC02413 625111 sc-eQTL 1.05e-01 -0.147 0.0905 0.327 B_Naive1 L2
ENSG00000102189 EEA1 694998 sc-eQTL 6.99e-01 0.0345 0.089 0.328 B_Naive2 L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 2.86e-01 -0.0877 0.0821 0.328 B_Naive2 L2
ENSG00000169372 CRADD -53046 sc-eQTL 5.24e-01 -0.0591 0.0926 0.328 B_Naive2 L2
ENSG00000173588 CEP83 -835659 sc-eQTL 4.08e-01 -0.0719 0.0867 0.328 B_Naive2 L2
ENSG00000173598 NUDT4 246446 sc-eQTL 6.59e-01 -0.0338 0.0766 0.328 B_Naive2 L2
ENSG00000177889 UBE2N 182382 sc-eQTL 6.27e-03 0.203 0.0737 0.328 B_Naive2 L2
ENSG00000187510 C12orf74 921486 sc-eQTL 9.67e-01 0.00272 0.0651 0.328 B_Naive2 L2
ENSG00000198015 MRPL42 156841 sc-eQTL 3.39e-01 0.0929 0.097 0.328 B_Naive2 L2
ENSG00000257345 LINC02413 625111 sc-eQTL 4.23e-01 -0.0748 0.0932 0.328 B_Naive2 L2
ENSG00000102189 EEA1 694998 sc-eQTL 7.75e-02 0.162 0.0912 0.336 CD4_CTL L2
ENSG00000120833 SOCS2 54515 sc-eQTL 3.67e-01 0.0834 0.0923 0.336 CD4_CTL L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 7.96e-01 0.0229 0.0882 0.336 CD4_CTL L2
ENSG00000169372 CRADD -53046 sc-eQTL 6.94e-02 -0.162 0.0887 0.336 CD4_CTL L2
ENSG00000173588 CEP83 -835659 sc-eQTL 7.73e-01 0.026 0.0901 0.336 CD4_CTL L2
ENSG00000173598 NUDT4 246446 sc-eQTL 3.77e-01 0.0775 0.0875 0.336 CD4_CTL L2
ENSG00000177889 UBE2N 182382 sc-eQTL 8.00e-01 -0.0227 0.0894 0.336 CD4_CTL L2
ENSG00000198015 MRPL42 156841 sc-eQTL 8.97e-01 -0.0129 0.0999 0.336 CD4_CTL L2
ENSG00000102189 EEA1 694998 sc-eQTL 8.62e-01 0.00956 0.055 0.327 CD4_Naive L2
ENSG00000120833 SOCS2 54515 sc-eQTL 6.65e-01 -0.0225 0.0519 0.327 CD4_Naive L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 6.16e-01 -0.0295 0.0587 0.327 CD4_Naive L2
ENSG00000169372 CRADD -53046 sc-eQTL 8.12e-01 -0.0214 0.0897 0.327 CD4_Naive L2
ENSG00000173588 CEP83 -835659 sc-eQTL 1.58e-01 0.0895 0.0633 0.327 CD4_Naive L2
ENSG00000173598 NUDT4 246446 sc-eQTL 1.43e-01 0.0771 0.0524 0.327 CD4_Naive L2
ENSG00000177889 UBE2N 182382 sc-eQTL 5.34e-01 0.0315 0.0506 0.327 CD4_Naive L2
ENSG00000198015 MRPL42 156841 sc-eQTL 9.18e-01 -0.00875 0.0849 0.327 CD4_Naive L2
ENSG00000102189 EEA1 694998 sc-eQTL 9.23e-01 -0.00736 0.0765 0.327 CD4_TCM L2
ENSG00000120833 SOCS2 54515 sc-eQTL 9.27e-01 -0.00548 0.0596 0.327 CD4_TCM L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 2.47e-01 -0.0819 0.0705 0.327 CD4_TCM L2
ENSG00000169372 CRADD -53046 sc-eQTL 8.85e-02 0.162 0.0948 0.327 CD4_TCM L2
ENSG00000173588 CEP83 -835659 sc-eQTL 1.61e-01 0.106 0.0751 0.327 CD4_TCM L2
ENSG00000173598 NUDT4 246446 sc-eQTL 9.67e-01 0.00246 0.0599 0.327 CD4_TCM L2
ENSG00000177889 UBE2N 182382 sc-eQTL 2.23e-01 0.07 0.0574 0.327 CD4_TCM L2
ENSG00000198015 MRPL42 156841 sc-eQTL 6.28e-01 0.0427 0.0878 0.327 CD4_TCM L2
ENSG00000102189 EEA1 694998 sc-eQTL 7.79e-01 0.0248 0.0884 0.327 CD4_TEM L2
ENSG00000120833 SOCS2 54515 sc-eQTL 9.13e-01 0.00712 0.0653 0.327 CD4_TEM L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 9.31e-01 0.00676 0.0782 0.327 CD4_TEM L2
ENSG00000169372 CRADD -53046 sc-eQTL 1.52e-01 0.138 0.0958 0.327 CD4_TEM L2
ENSG00000173588 CEP83 -835659 sc-eQTL 3.13e-01 -0.0885 0.0876 0.327 CD4_TEM L2
ENSG00000173598 NUDT4 246446 sc-eQTL 4.90e-01 0.0524 0.0759 0.327 CD4_TEM L2
ENSG00000177889 UBE2N 182382 sc-eQTL 3.95e-02 0.16 0.0772 0.327 CD4_TEM L2
ENSG00000198015 MRPL42 156841 sc-eQTL 4.47e-01 0.0653 0.0856 0.327 CD4_TEM L2
ENSG00000102189 EEA1 694998 sc-eQTL 1.98e-01 0.102 0.0786 0.327 CD8_CTL L2
ENSG00000120833 SOCS2 54515 sc-eQTL 6.89e-03 0.205 0.0753 0.327 CD8_CTL L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 5.25e-01 -0.0494 0.0777 0.327 CD8_CTL L2
ENSG00000169372 CRADD -53046 sc-eQTL 6.77e-01 0.0394 0.0944 0.327 CD8_CTL L2
ENSG00000173588 CEP83 -835659 sc-eQTL 1.98e-01 0.11 0.0853 0.327 CD8_CTL L2
ENSG00000173598 NUDT4 246446 sc-eQTL 3.56e-01 0.0647 0.0698 0.327 CD8_CTL L2
ENSG00000177889 UBE2N 182382 sc-eQTL 9.99e-01 5.53e-05 0.0812 0.327 CD8_CTL L2
ENSG00000198015 MRPL42 156841 sc-eQTL 4.24e-01 0.0744 0.093 0.327 CD8_CTL L2
ENSG00000102189 EEA1 694998 sc-eQTL 9.87e-01 0.00118 0.073 0.327 CD8_Naive L2
ENSG00000120833 SOCS2 54515 sc-eQTL 4.44e-01 -0.055 0.0718 0.327 CD8_Naive L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 7.23e-01 0.0286 0.0804 0.327 CD8_Naive L2
ENSG00000169372 CRADD -53046 sc-eQTL 3.23e-01 -0.092 0.0929 0.327 CD8_Naive L2
ENSG00000173588 CEP83 -835659 sc-eQTL 3.82e-01 0.0679 0.0774 0.327 CD8_Naive L2
ENSG00000173598 NUDT4 246446 sc-eQTL 3.45e-01 0.0608 0.0643 0.327 CD8_Naive L2
ENSG00000177889 UBE2N 182382 sc-eQTL 6.15e-01 0.0354 0.0702 0.327 CD8_Naive L2
ENSG00000198015 MRPL42 156841 sc-eQTL 8.22e-01 0.0203 0.0897 0.327 CD8_Naive L2
ENSG00000102189 EEA1 694998 sc-eQTL 9.76e-01 0.00295 0.0979 0.338 CD8_TCM L2
ENSG00000120833 SOCS2 54515 sc-eQTL 1.10e-01 -0.134 0.0835 0.338 CD8_TCM L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 7.91e-01 -0.0251 0.0945 0.338 CD8_TCM L2
ENSG00000169372 CRADD -53046 sc-eQTL 1.34e-01 0.149 0.0993 0.338 CD8_TCM L2
ENSG00000173588 CEP83 -835659 sc-eQTL 7.85e-01 0.0265 0.097 0.338 CD8_TCM L2
ENSG00000173598 NUDT4 246446 sc-eQTL 5.34e-01 -0.0493 0.0793 0.338 CD8_TCM L2
ENSG00000177889 UBE2N 182382 sc-eQTL 1.44e-01 0.138 0.0939 0.338 CD8_TCM L2
ENSG00000198015 MRPL42 156841 sc-eQTL 1.61e-01 -0.135 0.0962 0.338 CD8_TCM L2
ENSG00000102189 EEA1 694998 sc-eQTL 9.91e-01 0.00111 0.0978 0.329 CD8_TEM L2
ENSG00000120833 SOCS2 54515 sc-eQTL 5.74e-01 -0.0512 0.0908 0.329 CD8_TEM L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 7.16e-02 -0.172 0.0949 0.329 CD8_TEM L2
ENSG00000169372 CRADD -53046 sc-eQTL 4.60e-01 0.0749 0.101 0.329 CD8_TEM L2
ENSG00000173588 CEP83 -835659 sc-eQTL 8.59e-01 -0.0176 0.0987 0.329 CD8_TEM L2
ENSG00000173598 NUDT4 246446 sc-eQTL 7.02e-01 0.0357 0.0933 0.329 CD8_TEM L2
ENSG00000177889 UBE2N 182382 sc-eQTL 7.89e-01 -0.0238 0.0891 0.329 CD8_TEM L2
ENSG00000198015 MRPL42 156841 sc-eQTL 2.64e-01 -0.103 0.0921 0.329 CD8_TEM L2
ENSG00000102189 EEA1 694998 sc-eQTL 7.59e-01 -0.0284 0.0923 0.327 MAIT L2
ENSG00000120833 SOCS2 54515 sc-eQTL 3.35e-01 0.081 0.0839 0.327 MAIT L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 9.09e-01 0.00889 0.0774 0.327 MAIT L2
ENSG00000169372 CRADD -53046 sc-eQTL 3.39e-01 0.094 0.0981 0.327 MAIT L2
ENSG00000173588 CEP83 -835659 sc-eQTL 7.79e-01 -0.0248 0.0886 0.327 MAIT L2
ENSG00000173598 NUDT4 246446 sc-eQTL 4.83e-01 -0.0501 0.0713 0.327 MAIT L2
ENSG00000177889 UBE2N 182382 sc-eQTL 1.51e-01 0.126 0.0871 0.327 MAIT L2
ENSG00000198015 MRPL42 156841 sc-eQTL 4.37e-01 0.0696 0.0893 0.327 MAIT L2
ENSG00000102189 EEA1 694998 sc-eQTL 8.30e-01 0.0194 0.0901 0.322 NK_CD56bright L2
ENSG00000120833 SOCS2 54515 sc-eQTL 2.59e-01 -0.095 0.0838 0.322 NK_CD56bright L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 6.24e-01 -0.0402 0.0819 0.322 NK_CD56bright L2
ENSG00000169372 CRADD -53046 sc-eQTL 1.30e-01 -0.15 0.099 0.322 NK_CD56bright L2
ENSG00000173588 CEP83 -835659 sc-eQTL 6.05e-01 -0.0429 0.0829 0.322 NK_CD56bright L2
ENSG00000173598 NUDT4 246446 sc-eQTL 9.38e-01 0.00695 0.0887 0.322 NK_CD56bright L2
ENSG00000177889 UBE2N 182382 sc-eQTL 2.28e-01 -0.113 0.0939 0.322 NK_CD56bright L2
ENSG00000198015 MRPL42 156841 sc-eQTL 4.52e-01 0.0707 0.0937 0.322 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 52561 sc-eQTL 8.97e-01 0.0114 0.0874 0.322 NK_CD56bright L2
ENSG00000102189 EEA1 694998 sc-eQTL 6.40e-01 -0.0363 0.0775 0.328 NK_CD56dim L2
ENSG00000120833 SOCS2 54515 sc-eQTL 9.39e-02 -0.115 0.0682 0.328 NK_CD56dim L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 5.14e-02 -0.145 0.074 0.328 NK_CD56dim L2
ENSG00000169372 CRADD -53046 sc-eQTL 8.73e-01 0.0155 0.0973 0.328 NK_CD56dim L2
ENSG00000173588 CEP83 -835659 sc-eQTL 6.46e-01 -0.0397 0.0863 0.328 NK_CD56dim L2
ENSG00000173598 NUDT4 246446 sc-eQTL 5.66e-01 0.0396 0.0689 0.328 NK_CD56dim L2
ENSG00000177889 UBE2N 182382 sc-eQTL 5.12e-01 -0.0434 0.0661 0.328 NK_CD56dim L2
ENSG00000198015 MRPL42 156841 sc-eQTL 9.35e-01 0.00744 0.0917 0.328 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 52561 sc-eQTL 8.73e-02 0.161 0.0937 0.328 NK_CD56dim L2
ENSG00000102189 EEA1 694998 sc-eQTL 4.49e-01 0.069 0.091 0.336 NK_HLA L2
ENSG00000120833 SOCS2 54515 sc-eQTL 7.92e-01 -0.0237 0.0899 0.336 NK_HLA L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 6.17e-01 0.0412 0.0821 0.336 NK_HLA L2
ENSG00000169372 CRADD -53046 sc-eQTL 9.76e-01 -0.00306 0.101 0.336 NK_HLA L2
ENSG00000173588 CEP83 -835659 sc-eQTL 1.12e-01 0.15 0.0937 0.336 NK_HLA L2
ENSG00000173598 NUDT4 246446 sc-eQTL 8.00e-01 -0.0214 0.0842 0.336 NK_HLA L2
ENSG00000177889 UBE2N 182382 sc-eQTL 2.07e-01 -0.119 0.0939 0.336 NK_HLA L2
ENSG00000198015 MRPL42 156841 sc-eQTL 2.13e-01 -0.131 0.105 0.336 NK_HLA L2
ENSG00000246985 SOCS2-AS1 52561 sc-eQTL 4.07e-01 -0.0705 0.0849 0.336 NK_HLA L2
ENSG00000102189 EEA1 694998 sc-eQTL 1.23e-01 0.124 0.0802 0.328 NK_cytokine L2
ENSG00000120833 SOCS2 54515 sc-eQTL 8.25e-01 -0.0171 0.077 0.328 NK_cytokine L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 2.18e-01 -0.0962 0.0778 0.328 NK_cytokine L2
ENSG00000169372 CRADD -53046 sc-eQTL 5.51e-01 0.0521 0.0871 0.328 NK_cytokine L2
ENSG00000173588 CEP83 -835659 sc-eQTL 7.32e-01 -0.0307 0.0897 0.328 NK_cytokine L2
ENSG00000173598 NUDT4 246446 sc-eQTL 8.04e-01 -0.0171 0.0686 0.328 NK_cytokine L2
ENSG00000177889 UBE2N 182382 sc-eQTL 1.31e-01 0.119 0.0784 0.328 NK_cytokine L2
ENSG00000198015 MRPL42 156841 sc-eQTL 1.92e-02 0.213 0.0902 0.328 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 52561 sc-eQTL 5.38e-03 -0.252 0.0897 0.328 NK_cytokine L2
ENSG00000102189 EEA1 694998 sc-eQTL 9.18e-01 -0.0123 0.12 0.3 PB L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 5.75e-01 0.0628 0.111 0.3 PB L2
ENSG00000169372 CRADD -53046 sc-eQTL 1.02e-01 -0.167 0.102 0.3 PB L2
ENSG00000173588 CEP83 -835659 sc-eQTL 8.94e-01 0.0155 0.116 0.3 PB L2
ENSG00000173598 NUDT4 246446 sc-eQTL 4.95e-01 -0.0657 0.096 0.3 PB L2
ENSG00000177889 UBE2N 182382 sc-eQTL 4.33e-02 0.17 0.0832 0.3 PB L2
ENSG00000187510 C12orf74 921486 sc-eQTL 9.04e-01 0.0145 0.119 0.3 PB L2
ENSG00000198015 MRPL42 156841 sc-eQTL 4.55e-01 0.0871 0.116 0.3 PB L2
ENSG00000257345 LINC02413 625111 sc-eQTL 5.11e-01 -0.0743 0.113 0.3 PB L2
ENSG00000102189 EEA1 694998 sc-eQTL 9.85e-01 -0.00175 0.0958 0.326 Pro_T L2
ENSG00000120833 SOCS2 54515 sc-eQTL 7.77e-01 0.0249 0.0879 0.326 Pro_T L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 1.81e-01 -0.125 0.0931 0.326 Pro_T L2
ENSG00000169372 CRADD -53046 sc-eQTL 8.79e-01 -0.0139 0.0913 0.326 Pro_T L2
ENSG00000173588 CEP83 -835659 sc-eQTL 7.73e-01 -0.0268 0.0926 0.326 Pro_T L2
ENSG00000173598 NUDT4 246446 sc-eQTL 6.78e-01 0.0308 0.074 0.326 Pro_T L2
ENSG00000177889 UBE2N 182382 sc-eQTL 1.82e-02 0.16 0.0673 0.326 Pro_T L2
ENSG00000198015 MRPL42 156841 sc-eQTL 3.06e-01 -0.0839 0.0818 0.326 Pro_T L2
ENSG00000102189 EEA1 694998 sc-eQTL 9.74e-02 0.137 0.0824 0.327 Treg L2
ENSG00000120833 SOCS2 54515 sc-eQTL 2.04e-01 -0.104 0.0815 0.327 Treg L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 5.69e-01 0.0491 0.0861 0.327 Treg L2
ENSG00000169372 CRADD -53046 sc-eQTL 7.68e-01 0.0294 0.0995 0.327 Treg L2
ENSG00000173588 CEP83 -835659 sc-eQTL 9.44e-01 0.00643 0.0923 0.327 Treg L2
ENSG00000173598 NUDT4 246446 sc-eQTL 8.36e-01 0.0146 0.0705 0.327 Treg L2
ENSG00000177889 UBE2N 182382 sc-eQTL 8.08e-01 0.0185 0.0761 0.327 Treg L2
ENSG00000198015 MRPL42 156841 sc-eQTL 2.75e-01 -0.104 0.0955 0.327 Treg L2
ENSG00000102189 EEA1 694998 sc-eQTL 7.02e-01 0.0335 0.0873 0.32 cDC L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 9.42e-01 -0.00652 0.0898 0.32 cDC L2
ENSG00000169372 CRADD -53046 sc-eQTL 2.47e-01 0.115 0.0989 0.32 cDC L2
ENSG00000173588 CEP83 -835659 sc-eQTL 5.81e-01 -0.0465 0.0842 0.32 cDC L2
ENSG00000173598 NUDT4 246446 sc-eQTL 9.44e-01 0.00708 0.101 0.32 cDC L2
ENSG00000177889 UBE2N 182382 sc-eQTL 2.47e-01 0.102 0.0874 0.32 cDC L2
ENSG00000198015 MRPL42 156841 sc-eQTL 4.88e-01 -0.0698 0.1 0.32 cDC L2
ENSG00000102189 EEA1 694998 sc-eQTL 5.16e-01 -0.035 0.0538 0.327 cMono_IL1B L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 7.95e-01 0.0165 0.0634 0.327 cMono_IL1B L2
ENSG00000169372 CRADD -53046 sc-eQTL 2.88e-01 0.1 0.094 0.327 cMono_IL1B L2
ENSG00000173588 CEP83 -835659 sc-eQTL 4.82e-01 0.0608 0.0863 0.327 cMono_IL1B L2
ENSG00000173598 NUDT4 246446 sc-eQTL 8.62e-01 0.012 0.069 0.327 cMono_IL1B L2
ENSG00000177889 UBE2N 182382 sc-eQTL 1.01e-01 0.0886 0.0537 0.327 cMono_IL1B L2
ENSG00000198015 MRPL42 156841 sc-eQTL 7.67e-01 0.0223 0.075 0.327 cMono_IL1B L2
ENSG00000102189 EEA1 694998 sc-eQTL 6.79e-01 -0.029 0.07 0.327 cMono_S100A L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 7.12e-01 0.0247 0.0668 0.327 cMono_S100A L2
ENSG00000169372 CRADD -53046 sc-eQTL 4.53e-01 -0.0768 0.102 0.327 cMono_S100A L2
ENSG00000173588 CEP83 -835659 sc-eQTL 7.26e-01 0.0332 0.0945 0.327 cMono_S100A L2
ENSG00000173598 NUDT4 246446 sc-eQTL 5.76e-01 -0.0451 0.0804 0.327 cMono_S100A L2
ENSG00000177889 UBE2N 182382 sc-eQTL 5.88e-01 0.038 0.07 0.327 cMono_S100A L2
ENSG00000198015 MRPL42 156841 sc-eQTL 2.59e-02 -0.178 0.0794 0.327 cMono_S100A L2
ENSG00000102189 EEA1 694998 sc-eQTL 5.42e-01 0.0704 0.115 0.358 gdT L2
ENSG00000120833 SOCS2 54515 sc-eQTL 3.19e-01 -0.106 0.106 0.358 gdT L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 3.91e-01 -0.0959 0.111 0.358 gdT L2
ENSG00000169372 CRADD -53046 sc-eQTL 3.55e-01 -0.101 0.109 0.358 gdT L2
ENSG00000173588 CEP83 -835659 sc-eQTL 4.48e-01 0.0828 0.109 0.358 gdT L2
ENSG00000173598 NUDT4 246446 sc-eQTL 8.67e-01 -0.0175 0.104 0.358 gdT L2
ENSG00000177889 UBE2N 182382 sc-eQTL 4.48e-01 0.0867 0.114 0.358 gdT L2
ENSG00000198015 MRPL42 156841 sc-eQTL 9.49e-01 -0.00709 0.111 0.358 gdT L2
ENSG00000102189 EEA1 694998 sc-eQTL 4.84e-01 -0.0594 0.0848 0.331 intMono L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 7.64e-01 -0.0248 0.0825 0.331 intMono L2
ENSG00000169372 CRADD -53046 sc-eQTL 1.78e-01 -0.128 0.0947 0.331 intMono L2
ENSG00000173588 CEP83 -835659 sc-eQTL 6.55e-01 -0.0444 0.0994 0.331 intMono L2
ENSG00000173598 NUDT4 246446 sc-eQTL 4.96e-02 -0.169 0.0858 0.331 intMono L2
ENSG00000177889 UBE2N 182382 sc-eQTL 6.36e-01 0.039 0.0824 0.331 intMono L2
ENSG00000198015 MRPL42 156841 sc-eQTL 4.57e-01 -0.066 0.0887 0.331 intMono L2
ENSG00000102189 EEA1 694998 sc-eQTL 5.95e-01 0.04 0.0751 0.319 ncMono L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 7.64e-01 0.0189 0.0626 0.319 ncMono L2
ENSG00000169372 CRADD -53046 sc-eQTL 6.86e-01 -0.0395 0.0975 0.319 ncMono L2
ENSG00000173588 CEP83 -835659 sc-eQTL 2.86e-02 0.213 0.0968 0.319 ncMono L2
ENSG00000173598 NUDT4 246446 sc-eQTL 7.97e-01 -0.022 0.0857 0.319 ncMono L2
ENSG00000177889 UBE2N 182382 sc-eQTL 3.29e-01 0.0816 0.0834 0.319 ncMono L2
ENSG00000198015 MRPL42 156841 sc-eQTL 9.99e-01 -0.000138 0.0866 0.319 ncMono L2
ENSG00000102189 EEA1 694998 sc-eQTL 3.76e-01 0.095 0.107 0.333 pDC L2
ENSG00000136040 PLXNC1 -524248 sc-eQTL 9.76e-01 0.00318 0.103 0.333 pDC L2
ENSG00000169372 CRADD -53046 sc-eQTL 1.78e-01 -0.141 0.104 0.333 pDC L2
ENSG00000173588 CEP83 -835659 sc-eQTL 5.65e-01 0.0641 0.111 0.333 pDC L2
ENSG00000173598 NUDT4 246446 sc-eQTL 4.45e-01 0.0689 0.0899 0.333 pDC L2
ENSG00000177889 UBE2N 182382 sc-eQTL 7.57e-01 0.0331 0.107 0.333 pDC L2
ENSG00000198015 MRPL42 156841 sc-eQTL 6.35e-02 0.204 0.109 0.333 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 694998 sc-eQTL 3.01e-03 0.191 0.0637 0.327 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -524248 sc-eQTL 2.87e-01 0.0619 0.058 0.327 B_Memory LOneK1K
ENSG00000169372 CRADD -53046 sc-eQTL 6.01e-01 0.0519 0.099 0.327 B_Memory LOneK1K
ENSG00000173588 CEP83 -835659 sc-eQTL 8.25e-01 0.018 0.0812 0.327 B_Memory LOneK1K
ENSG00000173598 NUDT4 246446 sc-eQTL 2.03e-01 0.0745 0.0583 0.327 B_Memory LOneK1K
ENSG00000177889 UBE2N 182382 sc-eQTL 1.30e-01 0.0806 0.0531 0.327 B_Memory LOneK1K
ENSG00000187510 C12orf74 921486 sc-eQTL 1.33e-02 0.169 0.0678 0.327 B_Memory LOneK1K
ENSG00000198015 MRPL42 156841 sc-eQTL 6.41e-01 -0.0406 0.0869 0.327 B_Memory LOneK1K
ENSG00000257345 LINC02413 625111 sc-eQTL 6.26e-01 -0.0442 0.0905 0.327 B_Memory LOneK1K
ENSG00000102189 EEA1 694998 sc-eQTL 7.82e-01 0.0199 0.0718 0.327 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -524248 sc-eQTL 2.96e-01 -0.0733 0.0699 0.327 B_Naive LOneK1K
ENSG00000169372 CRADD -53046 sc-eQTL 9.02e-01 0.0114 0.093 0.327 B_Naive LOneK1K
ENSG00000173588 CEP83 -835659 sc-eQTL 5.56e-01 0.0431 0.073 0.327 B_Naive LOneK1K
ENSG00000173598 NUDT4 246446 sc-eQTL 8.09e-01 -0.0164 0.0679 0.327 B_Naive LOneK1K
ENSG00000177889 UBE2N 182382 sc-eQTL 1.44e-02 0.169 0.0686 0.327 B_Naive LOneK1K
ENSG00000187510 C12orf74 921486 sc-eQTL 8.93e-01 0.0114 0.085 0.327 B_Naive LOneK1K
ENSG00000198015 MRPL42 156841 sc-eQTL 7.70e-01 -0.025 0.0857 0.327 B_Naive LOneK1K
ENSG00000257345 LINC02413 625111 sc-eQTL 3.29e-02 -0.187 0.0871 0.327 B_Naive LOneK1K
ENSG00000102189 EEA1 694998 sc-eQTL 3.74e-01 -0.0444 0.0499 0.327 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -524248 sc-eQTL 7.05e-01 0.0224 0.0592 0.327 CD14_Mono LOneK1K
ENSG00000169372 CRADD -53046 sc-eQTL 4.65e-01 0.0698 0.0953 0.327 CD14_Mono LOneK1K
ENSG00000173588 CEP83 -835659 sc-eQTL 6.31e-01 0.0388 0.0806 0.327 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 246446 sc-eQTL 7.97e-01 -0.0176 0.0683 0.327 CD14_Mono LOneK1K
ENSG00000177889 UBE2N 182382 sc-eQTL 1.33e-01 0.0772 0.0512 0.327 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 156841 sc-eQTL 3.78e-01 -0.0629 0.0712 0.327 CD14_Mono LOneK1K
ENSG00000102189 EEA1 694998 sc-eQTL 7.81e-01 0.0187 0.0673 0.325 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -524248 sc-eQTL 8.88e-01 -0.00795 0.0563 0.325 CD16_Mono LOneK1K
ENSG00000169372 CRADD -53046 sc-eQTL 4.48e-01 -0.0772 0.102 0.325 CD16_Mono LOneK1K
ENSG00000173588 CEP83 -835659 sc-eQTL 3.52e-01 0.087 0.0934 0.325 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 246446 sc-eQTL 2.13e-01 -0.0949 0.0759 0.325 CD16_Mono LOneK1K
ENSG00000177889 UBE2N 182382 sc-eQTL 3.51e-01 0.0711 0.0761 0.325 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 156841 sc-eQTL 4.38e-01 0.0624 0.0803 0.325 CD16_Mono LOneK1K
ENSG00000102189 EEA1 694998 sc-eQTL 2.55e-01 0.0763 0.0667 0.328 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 54515 sc-eQTL 2.44e-01 -0.0719 0.0616 0.328 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -524248 sc-eQTL 1.24e-01 -0.104 0.0671 0.328 NK_CD56dim LOneK1K
ENSG00000169372 CRADD -53046 sc-eQTL 9.66e-01 -0.00409 0.0954 0.328 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 -835659 sc-eQTL 8.76e-01 0.0119 0.0759 0.328 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 246446 sc-eQTL 8.28e-01 0.0132 0.0606 0.328 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N 182382 sc-eQTL 9.84e-01 0.00114 0.0586 0.328 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 156841 sc-eQTL 3.86e-01 0.0758 0.0873 0.328 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 52561 sc-eQTL 8.44e-01 0.0189 0.096 0.328 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000169372 CRADD -53046 eQTL 0.00749 0.0377 0.0141 0.0 0.0 0.353
ENSG00000258357 AC023161.2 -897540 eQTL 0.0311 -0.0709 0.0329 0.0 0.0 0.353

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000120833 \N 54515 9.76e-06 1.18e-05 1.74e-06 6.3e-06 2.36e-06 4.8e-06 1.18e-05 2.12e-06 1.04e-05 5.47e-06 1.41e-05 6.09e-06 1.85e-05 4.06e-06 3.46e-06 6.61e-06 5.67e-06 8.09e-06 2.99e-06 2.99e-06 6.18e-06 1.06e-05 9.64e-06 3.38e-06 1.73e-05 4.49e-06 5.97e-06 4.83e-06 1.2e-05 1.03e-05 6.58e-06 1.09e-06 1.23e-06 3.52e-06 4.9e-06 2.78e-06 1.83e-06 1.91e-06 2.14e-06 1.11e-06 9.4e-07 1.4e-05 1.52e-06 1.9e-07 8.04e-07 1.74e-06 1.82e-06 7.75e-07 5.02e-07