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Genes within 1Mb (chr12:93397804:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 468473 sc-eQTL 5.44e-01 0.0298 0.049 0.464 B L1
ENSG00000136040 PLXNC1 -750773 sc-eQTL 3.63e-01 0.0443 0.0486 0.464 B L1
ENSG00000169372 CRADD -279571 sc-eQTL 6.18e-01 -0.0368 0.0736 0.464 B L1
ENSG00000173598 NUDT4 19921 sc-eQTL 3.40e-02 -0.116 0.0542 0.464 B L1
ENSG00000177889 UBE2N -44143 sc-eQTL 9.77e-01 0.00138 0.0483 0.464 B L1
ENSG00000187510 C12orf74 694961 sc-eQTL 3.47e-01 -0.0513 0.0544 0.464 B L1
ENSG00000198015 MRPL42 -69684 sc-eQTL 4.61e-02 -0.15 0.0747 0.464 B L1
ENSG00000205056 LINC02397 931353 sc-eQTL 5.37e-01 0.023 0.0372 0.464 B L1
ENSG00000257345 LINC02413 398586 sc-eQTL 1.39e-01 0.111 0.0746 0.464 B L1
ENSG00000102189 EEA1 468473 sc-eQTL 5.90e-01 -0.0271 0.0503 0.464 CD4T L1
ENSG00000120833 SOCS2 -172010 sc-eQTL 8.29e-01 0.0106 0.0487 0.464 CD4T L1
ENSG00000136040 PLXNC1 -750773 sc-eQTL 6.33e-01 -0.0244 0.0511 0.464 CD4T L1
ENSG00000169372 CRADD -279571 sc-eQTL 9.51e-01 -0.00513 0.0837 0.464 CD4T L1
ENSG00000173598 NUDT4 19921 sc-eQTL 5.72e-08 -0.254 0.0451 0.464 CD4T L1
ENSG00000177889 UBE2N -44143 sc-eQTL 6.55e-01 -0.02 0.0448 0.464 CD4T L1
ENSG00000198015 MRPL42 -69684 sc-eQTL 3.07e-04 -0.278 0.0756 0.464 CD4T L1
ENSG00000102189 EEA1 468473 sc-eQTL 2.20e-01 -0.0696 0.0566 0.464 CD8T L1
ENSG00000120833 SOCS2 -172010 sc-eQTL 5.12e-01 0.0428 0.0651 0.464 CD8T L1
ENSG00000136040 PLXNC1 -750773 sc-eQTL 8.97e-01 0.00872 0.0671 0.464 CD8T L1
ENSG00000169372 CRADD -279571 sc-eQTL 6.53e-01 0.0355 0.0789 0.464 CD8T L1
ENSG00000173598 NUDT4 19921 sc-eQTL 1.32e-07 -0.239 0.0438 0.464 CD8T L1
ENSG00000177889 UBE2N -44143 sc-eQTL 1.35e-01 -0.0869 0.058 0.464 CD8T L1
ENSG00000198015 MRPL42 -69684 sc-eQTL 2.66e-02 -0.183 0.0821 0.464 CD8T L1
ENSG00000102189 EEA1 468473 sc-eQTL 1.40e-01 -0.109 0.0735 0.468 DC L1
ENSG00000136040 PLXNC1 -750773 sc-eQTL 4.98e-01 -0.0541 0.0797 0.468 DC L1
ENSG00000169372 CRADD -279571 sc-eQTL 2.65e-01 -0.1 0.0898 0.468 DC L1
ENSG00000173598 NUDT4 19921 sc-eQTL 2.73e-02 -0.163 0.0732 0.468 DC L1
ENSG00000177889 UBE2N -44143 sc-eQTL 2.43e-01 0.0874 0.0746 0.468 DC L1
ENSG00000198015 MRPL42 -69684 sc-eQTL 2.02e-02 -0.199 0.0848 0.468 DC L1
ENSG00000205056 LINC02397 931353 sc-eQTL 4.62e-01 -0.0559 0.0759 0.468 DC L1
ENSG00000102189 EEA1 468473 sc-eQTL 9.02e-01 0.00549 0.0445 0.464 Mono L1
ENSG00000136040 PLXNC1 -750773 sc-eQTL 5.38e-02 -0.0978 0.0504 0.464 Mono L1
ENSG00000169372 CRADD -279571 sc-eQTL 9.72e-01 0.0033 0.0936 0.464 Mono L1
ENSG00000173598 NUDT4 19921 sc-eQTL 4.20e-02 -0.131 0.0639 0.464 Mono L1
ENSG00000177889 UBE2N -44143 sc-eQTL 7.06e-01 -0.0183 0.0484 0.464 Mono L1
ENSG00000198015 MRPL42 -69684 sc-eQTL 7.11e-03 -0.174 0.0641 0.464 Mono L1
ENSG00000102189 EEA1 468473 sc-eQTL 6.99e-01 -0.0243 0.0627 0.466 NK L1
ENSG00000120833 SOCS2 -172010 sc-eQTL 1.50e-01 0.0842 0.0583 0.466 NK L1
ENSG00000136040 PLXNC1 -750773 sc-eQTL 3.18e-01 -0.0611 0.0611 0.466 NK L1
ENSG00000169372 CRADD -279571 sc-eQTL 4.40e-01 0.0679 0.0878 0.466 NK L1
ENSG00000173598 NUDT4 19921 sc-eQTL 3.39e-04 -0.201 0.0552 0.466 NK L1
ENSG00000177889 UBE2N -44143 sc-eQTL 2.58e-01 0.0636 0.0561 0.466 NK L1
ENSG00000198015 MRPL42 -69684 sc-eQTL 5.02e-01 -0.054 0.0803 0.466 NK L1
ENSG00000246985 SOCS2-AS1 -173964 sc-eQTL 7.74e-01 -0.0264 0.0916 0.466 NK L1
ENSG00000102189 EEA1 468473 sc-eQTL 9.24e-01 0.00759 0.0792 0.464 Other_T L1
ENSG00000120833 SOCS2 -172010 sc-eQTL 2.04e-01 0.0931 0.0732 0.464 Other_T L1
ENSG00000136040 PLXNC1 -750773 sc-eQTL 6.82e-01 -0.0283 0.0689 0.464 Other_T L1
ENSG00000169372 CRADD -279571 sc-eQTL 3.04e-01 -0.0856 0.0831 0.464 Other_T L1
ENSG00000173598 NUDT4 19921 sc-eQTL 1.66e-04 -0.221 0.0575 0.464 Other_T L1
ENSG00000177889 UBE2N -44143 sc-eQTL 3.07e-01 0.0564 0.055 0.464 Other_T L1
ENSG00000198015 MRPL42 -69684 sc-eQTL 2.42e-01 -0.0763 0.065 0.464 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 468473 sc-eQTL 6.19e-01 0.048 0.0964 0.487 B_Activated L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 1.70e-01 -0.111 0.0808 0.487 B_Activated L2
ENSG00000169372 CRADD -279571 sc-eQTL 3.78e-02 0.197 0.0942 0.487 B_Activated L2
ENSG00000173598 NUDT4 19921 sc-eQTL 1.69e-01 0.117 0.0844 0.487 B_Activated L2
ENSG00000177889 UBE2N -44143 sc-eQTL 6.04e-01 -0.0547 0.105 0.487 B_Activated L2
ENSG00000187510 C12orf74 694961 sc-eQTL 7.91e-01 0.0236 0.089 0.487 B_Activated L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 3.05e-02 -0.22 0.101 0.487 B_Activated L2
ENSG00000205056 LINC02397 931353 sc-eQTL 1.93e-01 -0.12 0.0922 0.487 B_Activated L2
ENSG00000257345 LINC02413 398586 sc-eQTL 2.03e-01 0.126 0.0986 0.487 B_Activated L2
ENSG00000102189 EEA1 468473 sc-eQTL 3.33e-01 0.0722 0.0744 0.464 B_Intermediate L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 3.88e-01 0.0638 0.0738 0.464 B_Intermediate L2
ENSG00000169372 CRADD -279571 sc-eQTL 8.76e-01 0.0137 0.0878 0.464 B_Intermediate L2
ENSG00000173598 NUDT4 19921 sc-eQTL 4.86e-01 -0.0511 0.0731 0.464 B_Intermediate L2
ENSG00000177889 UBE2N -44143 sc-eQTL 9.70e-01 0.00285 0.0745 0.464 B_Intermediate L2
ENSG00000187510 C12orf74 694961 sc-eQTL 9.41e-01 -0.00612 0.0826 0.464 B_Intermediate L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 1.60e-01 -0.127 0.0904 0.464 B_Intermediate L2
ENSG00000205056 LINC02397 931353 sc-eQTL 4.03e-01 0.0511 0.061 0.464 B_Intermediate L2
ENSG00000257345 LINC02413 398586 sc-eQTL 9.72e-01 0.00312 0.0896 0.464 B_Intermediate L2
ENSG00000102189 EEA1 468473 sc-eQTL 7.25e-01 -0.0267 0.0757 0.461 B_Memory L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 7.42e-01 -0.0234 0.0712 0.461 B_Memory L2
ENSG00000169372 CRADD -279571 sc-eQTL 7.59e-01 0.0286 0.0932 0.461 B_Memory L2
ENSG00000173598 NUDT4 19921 sc-eQTL 2.61e-01 -0.075 0.0666 0.461 B_Memory L2
ENSG00000177889 UBE2N -44143 sc-eQTL 2.61e-01 0.067 0.0595 0.461 B_Memory L2
ENSG00000187510 C12orf74 694961 sc-eQTL 2.88e-01 -0.0808 0.0759 0.461 B_Memory L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 7.78e-01 0.0251 0.0887 0.461 B_Memory L2
ENSG00000205056 LINC02397 931353 sc-eQTL 7.09e-01 0.0276 0.0738 0.461 B_Memory L2
ENSG00000257345 LINC02413 398586 sc-eQTL 7.65e-01 0.0265 0.0887 0.461 B_Memory L2
ENSG00000102189 EEA1 468473 sc-eQTL 6.02e-01 -0.0371 0.0711 0.464 B_Naive1 L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 8.35e-01 -0.0155 0.0739 0.464 B_Naive1 L2
ENSG00000169372 CRADD -279571 sc-eQTL 7.98e-01 0.0238 0.0928 0.464 B_Naive1 L2
ENSG00000173598 NUDT4 19921 sc-eQTL 4.75e-03 -0.186 0.0652 0.464 B_Naive1 L2
ENSG00000177889 UBE2N -44143 sc-eQTL 8.78e-01 -0.011 0.0714 0.464 B_Naive1 L2
ENSG00000187510 C12orf74 694961 sc-eQTL 5.33e-02 -0.152 0.0782 0.464 B_Naive1 L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 5.18e-02 -0.16 0.0817 0.464 B_Naive1 L2
ENSG00000205056 LINC02397 931353 sc-eQTL 3.40e-01 0.0458 0.048 0.464 B_Naive1 L2
ENSG00000257345 LINC02413 398586 sc-eQTL 1.33e-01 0.131 0.087 0.464 B_Naive1 L2
ENSG00000102189 EEA1 468473 sc-eQTL 2.09e-01 0.109 0.0863 0.461 B_Naive2 L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 7.44e-01 0.0262 0.08 0.461 B_Naive2 L2
ENSG00000169372 CRADD -279571 sc-eQTL 3.32e-01 -0.0875 0.0899 0.461 B_Naive2 L2
ENSG00000173598 NUDT4 19921 sc-eQTL 5.07e-01 0.0494 0.0744 0.461 B_Naive2 L2
ENSG00000177889 UBE2N -44143 sc-eQTL 3.89e-01 0.0628 0.0728 0.461 B_Naive2 L2
ENSG00000187510 C12orf74 694961 sc-eQTL 5.17e-01 0.041 0.0632 0.461 B_Naive2 L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 6.73e-02 -0.172 0.0938 0.461 B_Naive2 L2
ENSG00000205056 LINC02397 931353 sc-eQTL 7.98e-01 0.0116 0.0454 0.461 B_Naive2 L2
ENSG00000257345 LINC02413 398586 sc-eQTL 1.04e-01 0.147 0.0902 0.461 B_Naive2 L2
ENSG00000102189 EEA1 468473 sc-eQTL 3.31e-02 -0.185 0.0863 0.461 CD4_CTL L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 1.96e-01 -0.113 0.0875 0.461 CD4_CTL L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 3.45e-01 0.0792 0.0836 0.461 CD4_CTL L2
ENSG00000169372 CRADD -279571 sc-eQTL 6.03e-02 0.159 0.0842 0.461 CD4_CTL L2
ENSG00000173598 NUDT4 19921 sc-eQTL 8.46e-03 -0.218 0.0818 0.461 CD4_CTL L2
ENSG00000177889 UBE2N -44143 sc-eQTL 7.96e-01 0.022 0.0849 0.461 CD4_CTL L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 8.15e-01 0.0222 0.0949 0.461 CD4_CTL L2
ENSG00000102189 EEA1 468473 sc-eQTL 9.93e-01 -0.000461 0.0532 0.464 CD4_Naive L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 5.48e-01 0.0302 0.0502 0.464 CD4_Naive L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 7.40e-01 0.0189 0.0568 0.464 CD4_Naive L2
ENSG00000169372 CRADD -279571 sc-eQTL 8.97e-01 -0.0113 0.0868 0.464 CD4_Naive L2
ENSG00000173598 NUDT4 19921 sc-eQTL 6.89e-06 -0.224 0.0486 0.464 CD4_Naive L2
ENSG00000177889 UBE2N -44143 sc-eQTL 6.66e-01 -0.0211 0.0489 0.464 CD4_Naive L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 2.90e-04 -0.294 0.0796 0.464 CD4_Naive L2
ENSG00000102189 EEA1 468473 sc-eQTL 3.00e-02 -0.159 0.0728 0.464 CD4_TCM L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 3.28e-01 0.0561 0.0572 0.464 CD4_TCM L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 5.27e-01 -0.0431 0.0681 0.464 CD4_TCM L2
ENSG00000169372 CRADD -279571 sc-eQTL 3.99e-01 -0.0775 0.0918 0.464 CD4_TCM L2
ENSG00000173598 NUDT4 19921 sc-eQTL 1.52e-07 -0.293 0.054 0.464 CD4_TCM L2
ENSG00000177889 UBE2N -44143 sc-eQTL 3.50e-01 -0.0518 0.0553 0.464 CD4_TCM L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 4.90e-02 -0.166 0.0838 0.464 CD4_TCM L2
ENSG00000102189 EEA1 468473 sc-eQTL 3.77e-01 -0.0749 0.0846 0.464 CD4_TEM L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 5.52e-01 -0.0373 0.0625 0.464 CD4_TEM L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 2.61e-01 -0.0842 0.0747 0.464 CD4_TEM L2
ENSG00000169372 CRADD -279571 sc-eQTL 3.50e-01 -0.0862 0.0921 0.464 CD4_TEM L2
ENSG00000173598 NUDT4 19921 sc-eQTL 1.85e-02 -0.17 0.0718 0.464 CD4_TEM L2
ENSG00000177889 UBE2N -44143 sc-eQTL 9.84e-01 -0.00151 0.0748 0.464 CD4_TEM L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 1.64e-02 -0.196 0.0811 0.464 CD4_TEM L2
ENSG00000102189 EEA1 468473 sc-eQTL 5.82e-01 -0.0422 0.0764 0.464 CD8_CTL L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 6.48e-01 -0.0339 0.0742 0.464 CD8_CTL L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 8.65e-01 -0.0128 0.0753 0.464 CD8_CTL L2
ENSG00000169372 CRADD -279571 sc-eQTL 8.66e-01 0.0154 0.0915 0.464 CD8_CTL L2
ENSG00000173598 NUDT4 19921 sc-eQTL 7.29e-02 -0.121 0.0673 0.464 CD8_CTL L2
ENSG00000177889 UBE2N -44143 sc-eQTL 8.33e-01 -0.0166 0.0787 0.464 CD8_CTL L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 2.07e-01 -0.114 0.0899 0.464 CD8_CTL L2
ENSG00000102189 EEA1 468473 sc-eQTL 1.18e-02 -0.175 0.0691 0.464 CD8_Naive L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 3.17e-01 -0.0691 0.0689 0.464 CD8_Naive L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 5.95e-01 -0.0411 0.0773 0.464 CD8_Naive L2
ENSG00000169372 CRADD -279571 sc-eQTL 7.16e-01 -0.0326 0.0895 0.464 CD8_Naive L2
ENSG00000173598 NUDT4 19921 sc-eQTL 1.27e-05 -0.265 0.0592 0.464 CD8_Naive L2
ENSG00000177889 UBE2N -44143 sc-eQTL 3.18e-01 -0.0675 0.0674 0.464 CD8_Naive L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 1.18e-01 -0.135 0.0857 0.464 CD8_Naive L2
ENSG00000102189 EEA1 468473 sc-eQTL 1.64e-01 0.13 0.093 0.456 CD8_TCM L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 5.15e-01 -0.0523 0.0802 0.456 CD8_TCM L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 4.76e-01 0.0643 0.0901 0.456 CD8_TCM L2
ENSG00000169372 CRADD -279571 sc-eQTL 5.62e-01 0.0553 0.0952 0.456 CD8_TCM L2
ENSG00000173598 NUDT4 19921 sc-eQTL 2.09e-01 -0.0951 0.0754 0.456 CD8_TCM L2
ENSG00000177889 UBE2N -44143 sc-eQTL 3.52e-01 -0.0839 0.0899 0.456 CD8_TCM L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 8.58e-01 -0.0166 0.0924 0.456 CD8_TCM L2
ENSG00000102189 EEA1 468473 sc-eQTL 4.03e-01 0.0776 0.0925 0.461 CD8_TEM L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 9.87e-01 0.00146 0.086 0.461 CD8_TEM L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 3.66e-01 0.082 0.0904 0.461 CD8_TEM L2
ENSG00000169372 CRADD -279571 sc-eQTL 7.45e-01 -0.0312 0.096 0.461 CD8_TEM L2
ENSG00000173598 NUDT4 19921 sc-eQTL 8.24e-03 -0.232 0.0868 0.461 CD8_TEM L2
ENSG00000177889 UBE2N -44143 sc-eQTL 4.09e-01 0.0697 0.0843 0.461 CD8_TEM L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 1.54e-01 -0.125 0.087 0.461 CD8_TEM L2
ENSG00000102189 EEA1 468473 sc-eQTL 9.97e-01 -0.000292 0.0891 0.459 MAIT L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 8.08e-01 0.0198 0.0811 0.459 MAIT L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 8.74e-01 0.0119 0.0746 0.459 MAIT L2
ENSG00000169372 CRADD -279571 sc-eQTL 7.58e-01 -0.0293 0.0949 0.459 MAIT L2
ENSG00000173598 NUDT4 19921 sc-eQTL 8.53e-03 -0.18 0.0677 0.459 MAIT L2
ENSG00000177889 UBE2N -44143 sc-eQTL 7.21e-01 0.0302 0.0845 0.459 MAIT L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 2.78e-01 -0.0935 0.086 0.459 MAIT L2
ENSG00000102189 EEA1 468473 sc-eQTL 1.18e-01 -0.134 0.0853 0.473 NK_CD56bright L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 4.16e-01 -0.0652 0.08 0.473 NK_CD56bright L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 1.35e-01 -0.116 0.0776 0.473 NK_CD56bright L2
ENSG00000169372 CRADD -279571 sc-eQTL 7.34e-01 -0.0323 0.0948 0.473 NK_CD56bright L2
ENSG00000173598 NUDT4 19921 sc-eQTL 1.98e-02 -0.196 0.0834 0.473 NK_CD56bright L2
ENSG00000177889 UBE2N -44143 sc-eQTL 4.04e-01 0.075 0.0896 0.473 NK_CD56bright L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 1.26e-01 -0.136 0.0889 0.473 NK_CD56bright L2
ENSG00000246985 SOCS2-AS1 -173964 sc-eQTL 5.38e-01 0.0514 0.0832 0.473 NK_CD56bright L2
ENSG00000102189 EEA1 468473 sc-eQTL 5.29e-01 -0.047 0.0745 0.468 NK_CD56dim L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 3.00e-01 0.0683 0.0658 0.468 NK_CD56dim L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 7.63e-01 -0.0217 0.0717 0.468 NK_CD56dim L2
ENSG00000169372 CRADD -279571 sc-eQTL 7.69e-01 0.0275 0.0934 0.468 NK_CD56dim L2
ENSG00000173598 NUDT4 19921 sc-eQTL 5.17e-02 -0.128 0.0656 0.468 NK_CD56dim L2
ENSG00000177889 UBE2N -44143 sc-eQTL 4.48e-01 0.0483 0.0635 0.468 NK_CD56dim L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 3.35e-01 0.0849 0.0879 0.468 NK_CD56dim L2
ENSG00000246985 SOCS2-AS1 -173964 sc-eQTL 8.59e-01 -0.0161 0.0906 0.468 NK_CD56dim L2
ENSG00000102189 EEA1 468473 sc-eQTL 8.05e-01 0.0218 0.0881 0.47 NK_HLA L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 8.31e-02 0.15 0.0863 0.47 NK_HLA L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 7.62e-01 -0.0241 0.0795 0.47 NK_HLA L2
ENSG00000169372 CRADD -279571 sc-eQTL 8.63e-01 -0.0168 0.0974 0.47 NK_HLA L2
ENSG00000173598 NUDT4 19921 sc-eQTL 1.24e-02 -0.202 0.0801 0.47 NK_HLA L2
ENSG00000177889 UBE2N -44143 sc-eQTL 1.57e-01 0.129 0.0908 0.47 NK_HLA L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 3.19e-01 -0.101 0.101 0.47 NK_HLA L2
ENSG00000246985 SOCS2-AS1 -173964 sc-eQTL 6.72e-01 0.0348 0.0822 0.47 NK_HLA L2
ENSG00000102189 EEA1 468473 sc-eQTL 3.21e-01 0.0764 0.0769 0.468 NK_cytokine L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 7.04e-01 0.028 0.0735 0.468 NK_cytokine L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 6.34e-01 0.0355 0.0745 0.468 NK_cytokine L2
ENSG00000169372 CRADD -279571 sc-eQTL 9.53e-01 0.00496 0.0833 0.468 NK_cytokine L2
ENSG00000173598 NUDT4 19921 sc-eQTL 3.33e-02 -0.139 0.0648 0.468 NK_cytokine L2
ENSG00000177889 UBE2N -44143 sc-eQTL 7.24e-01 -0.0266 0.0753 0.468 NK_cytokine L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 2.48e-01 -0.101 0.087 0.468 NK_cytokine L2
ENSG00000246985 SOCS2-AS1 -173964 sc-eQTL 3.65e-01 -0.0791 0.0871 0.468 NK_cytokine L2
ENSG00000102189 EEA1 468473 sc-eQTL 2.70e-01 -0.122 0.11 0.437 PB L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 7.15e-01 -0.0377 0.103 0.437 PB L2
ENSG00000169372 CRADD -279571 sc-eQTL 7.31e-01 -0.0327 0.095 0.437 PB L2
ENSG00000173598 NUDT4 19921 sc-eQTL 2.41e-01 -0.104 0.0883 0.437 PB L2
ENSG00000177889 UBE2N -44143 sc-eQTL 6.96e-01 -0.0307 0.0782 0.437 PB L2
ENSG00000187510 C12orf74 694961 sc-eQTL 5.26e-01 -0.07 0.11 0.437 PB L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 3.94e-01 -0.0917 0.107 0.437 PB L2
ENSG00000205056 LINC02397 931353 sc-eQTL 6.67e-01 -0.0366 0.085 0.437 PB L2
ENSG00000257345 LINC02413 398586 sc-eQTL 1.05e-01 0.169 0.103 0.437 PB L2
ENSG00000102189 EEA1 468473 sc-eQTL 5.41e-01 0.0544 0.0889 0.465 Pro_T L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 1.96e-01 0.105 0.0813 0.465 Pro_T L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 9.29e-01 -0.00772 0.0868 0.465 Pro_T L2
ENSG00000169372 CRADD -279571 sc-eQTL 9.50e-01 0.00537 0.0848 0.465 Pro_T L2
ENSG00000173598 NUDT4 19921 sc-eQTL 1.72e-02 -0.163 0.0678 0.465 Pro_T L2
ENSG00000177889 UBE2N -44143 sc-eQTL 9.68e-01 0.00254 0.0634 0.465 Pro_T L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 8.50e-01 -0.0144 0.0761 0.465 Pro_T L2
ENSG00000102189 EEA1 468473 sc-eQTL 7.62e-01 0.0244 0.0804 0.464 Treg L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 9.67e-01 0.00324 0.0793 0.464 Treg L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 2.04e-01 -0.106 0.0832 0.464 Treg L2
ENSG00000169372 CRADD -279571 sc-eQTL 6.04e-01 0.05 0.0964 0.464 Treg L2
ENSG00000173598 NUDT4 19921 sc-eQTL 8.15e-03 -0.18 0.0672 0.464 Treg L2
ENSG00000177889 UBE2N -44143 sc-eQTL 9.70e-01 -0.00279 0.0738 0.464 Treg L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 5.68e-02 -0.176 0.092 0.464 Treg L2
ENSG00000102189 EEA1 468473 sc-eQTL 5.57e-01 -0.0458 0.0777 0.473 cDC L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 8.17e-01 -0.0186 0.0799 0.473 cDC L2
ENSG00000169372 CRADD -279571 sc-eQTL 5.28e-01 -0.0558 0.0883 0.473 cDC L2
ENSG00000173598 NUDT4 19921 sc-eQTL 1.82e-01 -0.12 0.0894 0.473 cDC L2
ENSG00000177889 UBE2N -44143 sc-eQTL 8.55e-01 -0.0143 0.0781 0.473 cDC L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 1.40e-01 -0.132 0.089 0.473 cDC L2
ENSG00000205056 LINC02397 931353 sc-eQTL 1.56e-01 -0.0772 0.0542 0.473 cDC L2
ENSG00000102189 EEA1 468473 sc-eQTL 3.29e-01 0.0505 0.0516 0.464 cMono_IL1B L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 6.82e-02 -0.111 0.0604 0.464 cMono_IL1B L2
ENSG00000169372 CRADD -279571 sc-eQTL 3.83e-01 -0.0789 0.0903 0.464 cMono_IL1B L2
ENSG00000173598 NUDT4 19921 sc-eQTL 7.69e-02 -0.117 0.0658 0.464 cMono_IL1B L2
ENSG00000177889 UBE2N -44143 sc-eQTL 9.26e-01 -0.00482 0.0519 0.464 cMono_IL1B L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 9.50e-03 -0.185 0.0708 0.464 cMono_IL1B L2
ENSG00000102189 EEA1 468473 sc-eQTL 3.70e-01 -0.0599 0.0666 0.464 cMono_S100A L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 4.79e-02 -0.126 0.0632 0.464 cMono_S100A L2
ENSG00000169372 CRADD -279571 sc-eQTL 6.57e-01 0.0434 0.0976 0.464 cMono_S100A L2
ENSG00000173598 NUDT4 19921 sc-eQTL 1.66e-01 -0.106 0.0764 0.464 cMono_S100A L2
ENSG00000177889 UBE2N -44143 sc-eQTL 4.96e-01 -0.0455 0.0667 0.464 cMono_S100A L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 9.69e-03 -0.197 0.0754 0.464 cMono_S100A L2
ENSG00000102189 EEA1 468473 sc-eQTL 6.39e-01 0.0517 0.11 0.455 gdT L2
ENSG00000120833 SOCS2 -172010 sc-eQTL 6.18e-01 0.0511 0.102 0.455 gdT L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 2.07e-01 -0.135 0.106 0.455 gdT L2
ENSG00000169372 CRADD -279571 sc-eQTL 6.35e-02 -0.194 0.104 0.455 gdT L2
ENSG00000173598 NUDT4 19921 sc-eQTL 3.41e-01 -0.0949 0.0994 0.455 gdT L2
ENSG00000177889 UBE2N -44143 sc-eQTL 7.16e-03 0.29 0.106 0.455 gdT L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 7.05e-01 0.0403 0.106 0.455 gdT L2
ENSG00000102189 EEA1 468473 sc-eQTL 5.36e-01 0.0501 0.0809 0.464 intMono L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 4.07e-01 -0.0654 0.0786 0.464 intMono L2
ENSG00000169372 CRADD -279571 sc-eQTL 7.57e-02 0.161 0.09 0.464 intMono L2
ENSG00000173598 NUDT4 19921 sc-eQTL 8.07e-02 -0.144 0.082 0.464 intMono L2
ENSG00000177889 UBE2N -44143 sc-eQTL 3.08e-01 0.0801 0.0784 0.464 intMono L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 9.14e-01 0.00912 0.0847 0.464 intMono L2
ENSG00000102189 EEA1 468473 sc-eQTL 8.88e-01 -0.00981 0.0694 0.473 ncMono L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 6.20e-01 -0.0287 0.0578 0.473 ncMono L2
ENSG00000169372 CRADD -279571 sc-eQTL 8.60e-01 -0.0159 0.0901 0.473 ncMono L2
ENSG00000173598 NUDT4 19921 sc-eQTL 8.15e-01 -0.0185 0.0791 0.473 ncMono L2
ENSG00000177889 UBE2N -44143 sc-eQTL 2.88e-01 0.0819 0.077 0.473 ncMono L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 4.05e-01 0.0666 0.0799 0.473 ncMono L2
ENSG00000102189 EEA1 468473 sc-eQTL 5.89e-02 -0.189 0.0994 0.46 pDC L2
ENSG00000136040 PLXNC1 -750773 sc-eQTL 5.69e-01 0.0554 0.097 0.46 pDC L2
ENSG00000169372 CRADD -279571 sc-eQTL 1.43e-01 -0.144 0.0976 0.46 pDC L2
ENSG00000173598 NUDT4 19921 sc-eQTL 4.66e-01 -0.0617 0.0844 0.46 pDC L2
ENSG00000177889 UBE2N -44143 sc-eQTL 6.71e-02 0.183 0.0991 0.46 pDC L2
ENSG00000198015 MRPL42 -69684 sc-eQTL 1.77e-01 -0.14 0.103 0.46 pDC L2
ENSG00000205056 LINC02397 931353 sc-eQTL 7.34e-01 -0.0309 0.0908 0.46 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 468473 sc-eQTL 3.36e-01 0.0614 0.0637 0.464 B_Memory LOneK1K
ENSG00000136040 PLXNC1 -750773 sc-eQTL 7.33e-01 0.0195 0.057 0.464 B_Memory LOneK1K
ENSG00000169372 CRADD -279571 sc-eQTL 4.72e-01 0.0699 0.097 0.464 B_Memory LOneK1K
ENSG00000173598 NUDT4 19921 sc-eQTL 5.22e-01 -0.0368 0.0574 0.464 B_Memory LOneK1K
ENSG00000177889 UBE2N -44143 sc-eQTL 1.30e-01 0.0792 0.052 0.464 B_Memory LOneK1K
ENSG00000187510 C12orf74 694961 sc-eQTL 9.52e-01 -0.00408 0.0674 0.464 B_Memory LOneK1K
ENSG00000198015 MRPL42 -69684 sc-eQTL 1.52e-01 -0.122 0.0849 0.464 B_Memory LOneK1K
ENSG00000205056 LINC02397 931353 sc-eQTL 2.75e-01 0.0647 0.0591 0.464 B_Memory LOneK1K
ENSG00000257345 LINC02413 398586 sc-eQTL 8.69e-01 0.0147 0.0888 0.464 B_Memory LOneK1K
ENSG00000102189 EEA1 468473 sc-eQTL 9.67e-01 0.00282 0.0689 0.464 B_Naive LOneK1K
ENSG00000136040 PLXNC1 -750773 sc-eQTL 7.16e-01 0.0245 0.0673 0.464 B_Naive LOneK1K
ENSG00000169372 CRADD -279571 sc-eQTL 6.15e-01 -0.0449 0.0892 0.464 B_Naive LOneK1K
ENSG00000173598 NUDT4 19921 sc-eQTL 6.04e-02 -0.122 0.0646 0.464 B_Naive LOneK1K
ENSG00000177889 UBE2N -44143 sc-eQTL 6.89e-01 0.0268 0.0668 0.464 B_Naive LOneK1K
ENSG00000187510 C12orf74 694961 sc-eQTL 2.80e-01 -0.0881 0.0813 0.464 B_Naive LOneK1K
ENSG00000198015 MRPL42 -69684 sc-eQTL 1.66e-02 -0.196 0.0811 0.464 B_Naive LOneK1K
ENSG00000205056 LINC02397 931353 sc-eQTL 8.33e-01 0.0082 0.0389 0.464 B_Naive LOneK1K
ENSG00000257345 LINC02413 398586 sc-eQTL 6.07e-02 0.158 0.0838 0.464 B_Naive LOneK1K
ENSG00000102189 EEA1 468473 sc-eQTL 8.76e-01 0.00751 0.0479 0.464 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 -750773 sc-eQTL 2.89e-02 -0.124 0.0562 0.464 CD14_Mono LOneK1K
ENSG00000169372 CRADD -279571 sc-eQTL 6.09e-01 -0.0469 0.0916 0.464 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 19921 sc-eQTL 1.68e-02 -0.156 0.0647 0.464 CD14_Mono LOneK1K
ENSG00000177889 UBE2N -44143 sc-eQTL 3.88e-01 -0.0426 0.0493 0.464 CD14_Mono LOneK1K
ENSG00000198015 MRPL42 -69684 sc-eQTL 2.29e-03 -0.207 0.067 0.464 CD14_Mono LOneK1K
ENSG00000102189 EEA1 468473 sc-eQTL 8.60e-01 -0.0115 0.0648 0.466 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 -750773 sc-eQTL 3.10e-01 -0.0551 0.0541 0.466 CD16_Mono LOneK1K
ENSG00000169372 CRADD -279571 sc-eQTL 2.68e-01 0.109 0.0978 0.466 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 19921 sc-eQTL 3.45e-01 -0.0692 0.0732 0.466 CD16_Mono LOneK1K
ENSG00000177889 UBE2N -44143 sc-eQTL 6.74e-01 0.0309 0.0734 0.466 CD16_Mono LOneK1K
ENSG00000198015 MRPL42 -69684 sc-eQTL 6.44e-01 0.0359 0.0774 0.466 CD16_Mono LOneK1K
ENSG00000102189 EEA1 468473 sc-eQTL 9.45e-01 -0.00444 0.0645 0.468 NK_CD56dim LOneK1K
ENSG00000120833 SOCS2 -172010 sc-eQTL 1.15e-01 0.0937 0.0592 0.468 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 -750773 sc-eQTL 4.54e-01 -0.0488 0.065 0.468 NK_CD56dim LOneK1K
ENSG00000169372 CRADD -279571 sc-eQTL 5.69e-01 0.0524 0.0919 0.468 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 19921 sc-eQTL 1.31e-03 -0.186 0.057 0.468 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N -44143 sc-eQTL 4.73e-01 0.0405 0.0564 0.468 NK_CD56dim LOneK1K
ENSG00000198015 MRPL42 -69684 sc-eQTL 8.59e-01 -0.015 0.0843 0.468 NK_CD56dim LOneK1K
ENSG00000246985 SOCS2-AS1 -173964 sc-eQTL 5.71e-01 -0.0525 0.0925 0.468 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000173598 NUDT4 19921 eQTL 4.7e-20 -0.165 0.0176 0.0 0.0 0.471
ENSG00000198015 MRPL42 -69684 eQTL 3.90e-02 -0.0401 0.0194 0.0 0.0 0.471
ENSG00000258035 AC123567.2 -788240 eQTL 0.0481 -0.0486 0.0246 0.00102 0.0 0.471

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000173598 NUDT4 19921 3.92e-05 3.07e-05 6.31e-06 1.53e-05 5.8e-06 1.51e-05 4.17e-05 4.46e-06 3.05e-05 1.53e-05 3.73e-05 1.67e-05 4.7e-05 1.35e-05 6.69e-06 1.88e-05 1.58e-05 2.56e-05 7.62e-06 6.6e-06 1.46e-05 3.22e-05 3.03e-05 8.66e-06 4.24e-05 7.94e-06 1.42e-05 1.26e-05 3.14e-05 2.32e-05 1.9e-05 1.64e-06 2.59e-06 7.08e-06 1.11e-05 5.68e-06 3.2e-06 3.17e-06 4.65e-06 3.3e-06 1.75e-06 3.66e-05 3.58e-06 3.99e-07 2.49e-06 3.75e-06 4.14e-06 1.65e-06 1.54e-06
ENSG00000198015 MRPL42 -69684 1.37e-05 1.26e-05 2.41e-06 7.6e-06 2.36e-06 6.19e-06 1.38e-05 2.15e-06 1.15e-05 6.14e-06 1.58e-05 6.53e-06 1.83e-05 4.2e-06 3.62e-06 8.04e-06 5.78e-06 9.79e-06 2.95e-06 3.17e-06 6.71e-06 1.18e-05 1.07e-05 3.52e-06 1.93e-05 4.39e-06 7.19e-06 5.4e-06 1.33e-05 9.24e-06 7.11e-06 1.09e-06 1.22e-06 3.59e-06 5.42e-06 2.83e-06 1.77e-06 1.99e-06 2.19e-06 1.03e-06 9.75e-07 1.59e-05 1.76e-06 2.62e-07 9.39e-07 1.71e-06 2.12e-06 6.27e-07 5.61e-07