Genes within 1Mb (chr12:93159290:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 229959 sc-eQTL 8.20e-01 0.0586 0.257 0.056 PB L2
ENSG00000136040 PLXNC1 -989287 sc-eQTL 7.59e-01 -0.074 0.24 0.056 PB L2
ENSG00000169372 CRADD -518085 sc-eQTL 7.39e-01 -0.0741 0.221 0.056 PB L2
ENSG00000173598 NUDT4 -218593 sc-eQTL 7.44e-02 -0.368 0.204 0.056 PB L2
ENSG00000177889 UBE2N -282657 sc-eQTL 7.95e-01 -0.0475 0.182 0.056 PB L2
ENSG00000187510 C12orf74 456447 sc-eQTL 3.79e-01 -0.226 0.256 0.056 PB L2
ENSG00000198015 MRPL42 -308198 sc-eQTL 7.38e-01 0.0839 0.25 0.056 PB L2
ENSG00000205056 LINC02397 692839 sc-eQTL 8.08e-01 0.0484 0.198 0.056 PB L2
ENSG00000257345 LINC02413 160072 sc-eQTL 7.19e-01 -0.0877 0.243 0.056 PB L2
ENSG00000277851 LINC02391 795458 sc-eQTL 9.87e-01 0.00391 0.243 0.056 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000169372 CRADD -518085 pQTL 0.00622 -0.0841 0.0307 0.00221 0.00112 0.0231
ENSG00000205056 LINC02397 692839 eQTL 0.00496 0.171 0.0606 0.00125 0.0 0.0206


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186076 \N -482296 7.76e-07 5.67e-07 8.99e-08 3.87e-07 1.07e-07 1.85e-07 5.28e-07 1.01e-07 3.94e-07 2.16e-07 6.56e-07 3.65e-07 7.71e-07 1.34e-07 1.71e-07 2.14e-07 2.25e-07 3.79e-07 1.62e-07 1.31e-07 1.76e-07 3.49e-07 3.04e-07 1.34e-07 7.71e-07 2.36e-07 2.43e-07 2.18e-07 2.98e-07 5.67e-07 2.93e-07 7.41e-08 5.86e-08 1.4e-07 2.84e-07 6.85e-08 1.06e-07 6.78e-08 5.67e-08 5.25e-08 4.82e-08 5.09e-07 1.65e-08 1.89e-08 9.15e-08 1.81e-08 9.98e-08 2.75e-09 5.52e-08