Genes within 1Mb (chr12:93069463:TAAG:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 140132 sc-eQTL 2.49e-01 0.218 0.188 0.05 CD4_CTL L2
ENSG00000120833 SOCS2 -500351 sc-eQTL 4.37e-01 0.148 0.19 0.05 CD4_CTL L2
ENSG00000133639 BTG1 923617 sc-eQTL 1.04e-01 0.201 0.124 0.05 CD4_CTL L2
ENSG00000169372 CRADD -607912 sc-eQTL 8.00e-01 -0.0467 0.184 0.05 CD4_CTL L2
ENSG00000173598 NUDT4 -308420 sc-eQTL 4.79e-02 -0.356 0.179 0.05 CD4_CTL L2
ENSG00000177889 UBE2N -372484 sc-eQTL 6.19e-01 0.0915 0.184 0.05 CD4_CTL L2
ENSG00000198015 MRPL42 -398025 sc-eQTL 4.07e-01 0.17 0.205 0.05 CD4_CTL L2
ENSG00000245904 AC025164.1 923890 sc-eQTL 2.23e-01 0.238 0.194 0.05 CD4_CTL L2
ENSG00000257242 LINC01619 926549 sc-eQTL 7.05e-01 -0.0669 0.176 0.05 CD4_CTL L2
ENSG00000102189 EEA1 140132 sc-eQTL 7.85e-01 0.0665 0.243 0.052 PB L2
ENSG00000133639 BTG1 923617 sc-eQTL 3.28e-01 0.118 0.12 0.052 PB L2
ENSG00000169372 CRADD -607912 sc-eQTL 9.64e-01 -0.00939 0.209 0.052 PB L2
ENSG00000173598 NUDT4 -308420 sc-eQTL 8.61e-02 -0.334 0.193 0.052 PB L2
ENSG00000177889 UBE2N -372484 sc-eQTL 7.93e-01 -0.0453 0.172 0.052 PB L2
ENSG00000187510 C12orf74 366620 sc-eQTL 3.97e-01 -0.206 0.242 0.052 PB L2
ENSG00000198015 MRPL42 -398025 sc-eQTL 4.11e-01 -0.195 0.236 0.052 PB L2
ENSG00000205056 LINC02397 603012 sc-eQTL 9.03e-01 0.0228 0.187 0.052 PB L2
ENSG00000245904 AC025164.1 923890 sc-eQTL 4.79e-01 0.147 0.208 0.052 PB L2
ENSG00000257242 LINC01619 926549 sc-eQTL 5.11e-02 -0.439 0.223 0.052 PB L2
ENSG00000257345 LINC02413 70245 sc-eQTL 4.57e-01 -0.171 0.229 0.052 PB L2
ENSG00000277851 LINC02391 705631 sc-eQTL 8.03e-01 -0.0572 0.229 0.052 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186076 AC012085.1 -572123 eQTL 3.86e-02 -0.222 0.107 0.0 0.0 0.027


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina