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Genes within 1Mb (chr12:92467343:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 -461988 sc-eQTL 6.51e-01 0.0243 0.0536 0.323 B L1
ENSG00000133639 BTG1 321497 sc-eQTL 1.38e-01 0.0637 0.0427 0.323 B L1
ENSG00000173598 NUDT4 -910540 sc-eQTL 2.17e-01 0.0738 0.0596 0.323 B L1
ENSG00000177889 UBE2N -974604 sc-eQTL 2.25e-01 0.0639 0.0526 0.323 B L1
ENSG00000187510 C12orf74 -235500 sc-eQTL 9.88e-01 0.000866 0.0595 0.323 B L1
ENSG00000205056 LINC02397 892 sc-eQTL 5.55e-07 -0.198 0.0383 0.323 B L1
ENSG00000245904 AC025164.1 321770 sc-eQTL 1.11e-01 0.0929 0.058 0.323 B L1
ENSG00000257242 LINC01619 324429 sc-eQTL 2.35e-01 -0.0654 0.055 0.323 B L1
ENSG00000257345 LINC02413 -531875 sc-eQTL 8.03e-01 -0.0204 0.0819 0.323 B L1
ENSG00000277851 LINC02391 103511 sc-eQTL 4.81e-01 0.0567 0.0803 0.323 B L1
ENSG00000102189 EEA1 -461988 sc-eQTL 9.52e-01 0.00338 0.0561 0.323 CD4T L1
ENSG00000133639 BTG1 321497 sc-eQTL 8.54e-01 0.01 0.0546 0.323 CD4T L1
ENSG00000173598 NUDT4 -910540 sc-eQTL 4.73e-01 0.0387 0.0538 0.323 CD4T L1
ENSG00000177889 UBE2N -974604 sc-eQTL 9.20e-01 -0.00504 0.05 0.323 CD4T L1
ENSG00000245904 AC025164.1 321770 sc-eQTL 6.64e-01 -0.0325 0.0746 0.323 CD4T L1
ENSG00000257242 LINC01619 324429 sc-eQTL 3.11e-01 0.0706 0.0695 0.323 CD4T L1
ENSG00000102189 EEA1 -461988 sc-eQTL 4.48e-01 -0.0476 0.0626 0.323 CD8T L1
ENSG00000133639 BTG1 321497 sc-eQTL 9.20e-01 -0.00528 0.0527 0.323 CD8T L1
ENSG00000173598 NUDT4 -910540 sc-eQTL 6.59e-01 0.0229 0.0517 0.323 CD8T L1
ENSG00000177889 UBE2N -974604 sc-eQTL 1.07e-01 0.104 0.064 0.323 CD8T L1
ENSG00000245904 AC025164.1 321770 sc-eQTL 8.48e-01 -0.0132 0.0686 0.323 CD8T L1
ENSG00000257242 LINC01619 324429 sc-eQTL 7.37e-01 -0.0239 0.0708 0.323 CD8T L1
ENSG00000102189 EEA1 -461988 sc-eQTL 6.35e-01 -0.0381 0.0802 0.32 DC L1
ENSG00000133639 BTG1 321497 sc-eQTL 5.10e-01 -0.057 0.0864 0.32 DC L1
ENSG00000173598 NUDT4 -910540 sc-eQTL 5.62e-01 0.0467 0.0804 0.32 DC L1
ENSG00000177889 UBE2N -974604 sc-eQTL 1.92e-01 -0.106 0.0809 0.32 DC L1
ENSG00000205056 LINC02397 892 sc-eQTL 8.81e-01 -0.0124 0.0825 0.32 DC L1
ENSG00000245904 AC025164.1 321770 sc-eQTL 6.97e-01 -0.0365 0.0937 0.32 DC L1
ENSG00000257242 LINC01619 324429 sc-eQTL 7.72e-02 0.158 0.0891 0.32 DC L1
ENSG00000277851 LINC02391 103511 sc-eQTL 8.47e-01 -0.0164 0.0849 0.32 DC L1
ENSG00000102189 EEA1 -461988 sc-eQTL 3.79e-01 -0.0427 0.0485 0.323 Mono L1
ENSG00000133639 BTG1 321497 sc-eQTL 2.11e-01 0.0514 0.041 0.323 Mono L1
ENSG00000173598 NUDT4 -910540 sc-eQTL 3.38e-01 0.0675 0.0703 0.323 Mono L1
ENSG00000177889 UBE2N -974604 sc-eQTL 3.57e-01 -0.0487 0.0527 0.323 Mono L1
ENSG00000245904 AC025164.1 321770 sc-eQTL 5.76e-01 -0.0375 0.0669 0.323 Mono L1
ENSG00000257242 LINC01619 324429 sc-eQTL 5.66e-01 -0.0472 0.0822 0.323 Mono L1
ENSG00000102189 EEA1 -461988 sc-eQTL 9.64e-01 0.00312 0.0684 0.322 NK L1
ENSG00000133639 BTG1 321497 sc-eQTL 8.65e-01 0.00823 0.0484 0.322 NK L1
ENSG00000173598 NUDT4 -910540 sc-eQTL 8.28e-01 -0.0135 0.062 0.322 NK L1
ENSG00000177889 UBE2N -974604 sc-eQTL 4.45e-01 0.0469 0.0613 0.322 NK L1
ENSG00000245904 AC025164.1 321770 sc-eQTL 6.49e-01 -0.0306 0.0671 0.322 NK L1
ENSG00000257242 LINC01619 324429 sc-eQTL 8.11e-01 -0.016 0.0668 0.322 NK L1
ENSG00000102189 EEA1 -461988 sc-eQTL 7.61e-02 -0.154 0.0866 0.323 Other_T L1
ENSG00000133639 BTG1 321497 sc-eQTL 8.75e-01 -0.00633 0.0401 0.323 Other_T L1
ENSG00000173598 NUDT4 -910540 sc-eQTL 4.82e-01 0.0461 0.0655 0.323 Other_T L1
ENSG00000177889 UBE2N -974604 sc-eQTL 8.95e-02 -0.103 0.0603 0.323 Other_T L1
ENSG00000245904 AC025164.1 321770 sc-eQTL 2.56e-01 -0.0964 0.0847 0.323 Other_T L1
ENSG00000257242 LINC01619 324429 sc-eQTL 9.85e-01 0.00146 0.0799 0.323 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 -461988 sc-eQTL 3.76e-01 0.0893 0.101 0.339 B_Activated L2
ENSG00000133639 BTG1 321497 sc-eQTL 9.18e-01 0.00544 0.0528 0.339 B_Activated L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 1.05e-01 -0.144 0.0881 0.339 B_Activated L2
ENSG00000177889 UBE2N -974604 sc-eQTL 4.65e-01 -0.0807 0.11 0.339 B_Activated L2
ENSG00000187510 C12orf74 -235500 sc-eQTL 3.95e-03 0.266 0.0909 0.339 B_Activated L2
ENSG00000205056 LINC02397 892 sc-eQTL 4.44e-01 0.0743 0.0968 0.339 B_Activated L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 2.28e-01 -0.124 0.102 0.339 B_Activated L2
ENSG00000257242 LINC01619 324429 sc-eQTL 3.49e-01 -0.0749 0.0798 0.339 B_Activated L2
ENSG00000257345 LINC02413 -531875 sc-eQTL 4.56e-01 -0.0774 0.103 0.339 B_Activated L2
ENSG00000277851 LINC02391 103511 sc-eQTL 4.94e-01 0.0588 0.0859 0.339 B_Activated L2
ENSG00000102189 EEA1 -461988 sc-eQTL 4.12e-01 -0.0673 0.0818 0.324 B_Intermediate L2
ENSG00000133639 BTG1 321497 sc-eQTL 2.39e-01 0.0617 0.0523 0.324 B_Intermediate L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 1.39e-01 0.119 0.0801 0.324 B_Intermediate L2
ENSG00000177889 UBE2N -974604 sc-eQTL 2.74e-01 0.0897 0.0817 0.324 B_Intermediate L2
ENSG00000187510 C12orf74 -235500 sc-eQTL 6.12e-01 0.0461 0.0907 0.324 B_Intermediate L2
ENSG00000205056 LINC02397 892 sc-eQTL 4.53e-02 -0.134 0.0665 0.324 B_Intermediate L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 1.71e-02 0.175 0.0726 0.324 B_Intermediate L2
ENSG00000257242 LINC01619 324429 sc-eQTL 1.54e-01 -0.103 0.0719 0.324 B_Intermediate L2
ENSG00000257345 LINC02413 -531875 sc-eQTL 2.57e-01 0.112 0.0982 0.324 B_Intermediate L2
ENSG00000277851 LINC02391 103511 sc-eQTL 8.53e-01 -0.0176 0.0945 0.324 B_Intermediate L2
ENSG00000102189 EEA1 -461988 sc-eQTL 9.66e-01 0.00351 0.0831 0.323 B_Memory L2
ENSG00000133639 BTG1 321497 sc-eQTL 6.24e-01 0.0235 0.0479 0.323 B_Memory L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 3.27e-01 -0.0719 0.0731 0.323 B_Memory L2
ENSG00000177889 UBE2N -974604 sc-eQTL 7.15e-01 0.024 0.0655 0.323 B_Memory L2
ENSG00000187510 C12orf74 -235500 sc-eQTL 3.97e-01 0.0707 0.0833 0.323 B_Memory L2
ENSG00000205056 LINC02397 892 sc-eQTL 1.09e-02 -0.205 0.0798 0.323 B_Memory L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 7.47e-01 0.0275 0.0851 0.323 B_Memory L2
ENSG00000257242 LINC01619 324429 sc-eQTL 2.30e-02 0.173 0.0753 0.323 B_Memory L2
ENSG00000257345 LINC02413 -531875 sc-eQTL 5.01e-01 -0.0655 0.0972 0.323 B_Memory L2
ENSG00000277851 LINC02391 103511 sc-eQTL 2.12e-01 0.114 0.0911 0.323 B_Memory L2
ENSG00000102189 EEA1 -461988 sc-eQTL 9.86e-01 -0.00138 0.079 0.323 B_Naive1 L2
ENSG00000133639 BTG1 321497 sc-eQTL 5.92e-02 0.0933 0.0492 0.323 B_Naive1 L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 1.66e-01 0.102 0.0734 0.323 B_Naive1 L2
ENSG00000177889 UBE2N -974604 sc-eQTL 6.19e-01 -0.0394 0.0792 0.323 B_Naive1 L2
ENSG00000187510 C12orf74 -235500 sc-eQTL 9.34e-01 0.00722 0.0875 0.323 B_Naive1 L2
ENSG00000205056 LINC02397 892 sc-eQTL 1.46e-05 -0.226 0.051 0.323 B_Naive1 L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 1.05e-01 0.116 0.0712 0.323 B_Naive1 L2
ENSG00000257242 LINC01619 324429 sc-eQTL 7.12e-01 0.0263 0.0711 0.323 B_Naive1 L2
ENSG00000257345 LINC02413 -531875 sc-eQTL 4.51e-01 -0.0731 0.0969 0.323 B_Naive1 L2
ENSG00000277851 LINC02391 103511 sc-eQTL 6.33e-01 0.0418 0.0873 0.323 B_Naive1 L2
ENSG00000102189 EEA1 -461988 sc-eQTL 8.91e-01 0.013 0.0949 0.324 B_Naive2 L2
ENSG00000133639 BTG1 321497 sc-eQTL 3.08e-01 0.0486 0.0476 0.324 B_Naive2 L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 9.92e-01 0.00085 0.0816 0.324 B_Naive2 L2
ENSG00000177889 UBE2N -974604 sc-eQTL 2.52e-01 0.0915 0.0796 0.324 B_Naive2 L2
ENSG00000187510 C12orf74 -235500 sc-eQTL 1.88e-01 0.0912 0.069 0.324 B_Naive2 L2
ENSG00000205056 LINC02397 892 sc-eQTL 1.10e-04 -0.189 0.048 0.324 B_Naive2 L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 9.62e-01 0.00377 0.0785 0.324 B_Naive2 L2
ENSG00000257242 LINC01619 324429 sc-eQTL 4.01e-01 -0.0631 0.075 0.324 B_Naive2 L2
ENSG00000257345 LINC02413 -531875 sc-eQTL 1.81e-01 -0.133 0.099 0.324 B_Naive2 L2
ENSG00000277851 LINC02391 103511 sc-eQTL 4.29e-01 0.0735 0.0928 0.324 B_Naive2 L2
ENSG00000102189 EEA1 -461988 sc-eQTL 5.16e-01 -0.062 0.0954 0.332 CD4_CTL L2
ENSG00000133639 BTG1 321497 sc-eQTL 2.96e-01 -0.0656 0.0626 0.332 CD4_CTL L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 5.02e-01 -0.0611 0.0909 0.332 CD4_CTL L2
ENSG00000177889 UBE2N -974604 sc-eQTL 4.02e-01 0.0779 0.0928 0.332 CD4_CTL L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 4.45e-01 -0.0752 0.0983 0.332 CD4_CTL L2
ENSG00000257242 LINC01619 324429 sc-eQTL 6.24e-01 0.0436 0.089 0.332 CD4_CTL L2
ENSG00000102189 EEA1 -461988 sc-eQTL 4.48e-01 -0.0445 0.0585 0.323 CD4_Naive L2
ENSG00000133639 BTG1 321497 sc-eQTL 9.55e-01 0.00311 0.0548 0.323 CD4_Naive L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 6.61e-01 0.0246 0.0561 0.323 CD4_Naive L2
ENSG00000177889 UBE2N -974604 sc-eQTL 4.24e-01 -0.0431 0.0538 0.323 CD4_Naive L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 6.18e-01 -0.037 0.0742 0.323 CD4_Naive L2
ENSG00000257242 LINC01619 324429 sc-eQTL 8.07e-01 0.0174 0.0714 0.323 CD4_Naive L2
ENSG00000102189 EEA1 -461988 sc-eQTL 6.31e-01 0.039 0.0811 0.323 CD4_TCM L2
ENSG00000133639 BTG1 321497 sc-eQTL 1.22e-01 0.0803 0.0517 0.323 CD4_TCM L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 8.64e-02 0.109 0.063 0.323 CD4_TCM L2
ENSG00000177889 UBE2N -974604 sc-eQTL 9.51e-01 0.00374 0.061 0.323 CD4_TCM L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 5.19e-01 -0.0503 0.078 0.323 CD4_TCM L2
ENSG00000257242 LINC01619 324429 sc-eQTL 5.93e-02 0.126 0.0667 0.323 CD4_TCM L2
ENSG00000102189 EEA1 -461988 sc-eQTL 2.91e-01 0.0973 0.0919 0.323 CD4_TEM L2
ENSG00000133639 BTG1 321497 sc-eQTL 9.15e-01 0.0068 0.0637 0.323 CD4_TEM L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 3.74e-01 -0.0704 0.079 0.323 CD4_TEM L2
ENSG00000177889 UBE2N -974604 sc-eQTL 4.76e-01 0.058 0.0812 0.323 CD4_TEM L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 4.10e-01 0.077 0.0934 0.323 CD4_TEM L2
ENSG00000257242 LINC01619 324429 sc-eQTL 3.22e-01 -0.089 0.0896 0.323 CD4_TEM L2
ENSG00000102189 EEA1 -461988 sc-eQTL 8.97e-01 -0.0107 0.0821 0.323 CD8_CTL L2
ENSG00000133639 BTG1 321497 sc-eQTL 1.25e-01 -0.0799 0.0519 0.323 CD8_CTL L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 8.01e-01 -0.0183 0.0728 0.323 CD8_CTL L2
ENSG00000177889 UBE2N -974604 sc-eQTL 1.71e-01 0.116 0.0842 0.323 CD8_CTL L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 6.80e-01 0.0354 0.0856 0.323 CD8_CTL L2
ENSG00000257242 LINC01619 324429 sc-eQTL 1.09e-01 0.124 0.0769 0.323 CD8_CTL L2
ENSG00000102189 EEA1 -461988 sc-eQTL 3.90e-01 -0.0667 0.0774 0.323 CD8_Naive L2
ENSG00000133639 BTG1 321497 sc-eQTL 9.61e-01 -0.00329 0.0671 0.323 CD8_Naive L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 5.06e-01 0.0456 0.0684 0.323 CD8_Naive L2
ENSG00000177889 UBE2N -974604 sc-eQTL 5.24e-01 0.0476 0.0746 0.323 CD8_Naive L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 6.44e-01 -0.0385 0.0833 0.323 CD8_Naive L2
ENSG00000257242 LINC01619 324429 sc-eQTL 7.02e-01 -0.0324 0.0846 0.323 CD8_Naive L2
ENSG00000102189 EEA1 -461988 sc-eQTL 1.15e-01 -0.159 0.101 0.329 CD8_TCM L2
ENSG00000133639 BTG1 321497 sc-eQTL 8.43e-01 -0.0141 0.0711 0.329 CD8_TCM L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 7.21e-01 -0.0293 0.0819 0.329 CD8_TCM L2
ENSG00000177889 UBE2N -974604 sc-eQTL 4.11e-01 -0.0802 0.0974 0.329 CD8_TCM L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 7.14e-01 -0.0359 0.098 0.329 CD8_TCM L2
ENSG00000257242 LINC01619 324429 sc-eQTL 2.73e-01 -0.107 0.0977 0.329 CD8_TCM L2
ENSG00000102189 EEA1 -461988 sc-eQTL 6.31e-01 -0.0491 0.102 0.317 CD8_TEM L2
ENSG00000133639 BTG1 321497 sc-eQTL 2.68e-01 -0.078 0.0702 0.317 CD8_TEM L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 3.66e-01 -0.0881 0.0973 0.317 CD8_TEM L2
ENSG00000177889 UBE2N -974604 sc-eQTL 8.47e-01 0.018 0.0931 0.317 CD8_TEM L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 2.17e-01 -0.129 0.104 0.317 CD8_TEM L2
ENSG00000257242 LINC01619 324429 sc-eQTL 1.10e-01 -0.154 0.0959 0.317 CD8_TEM L2
ENSG00000102189 EEA1 -461988 sc-eQTL 1.93e-01 -0.128 0.0981 0.323 MAIT L2
ENSG00000133639 BTG1 321497 sc-eQTL 9.82e-01 0.00141 0.0615 0.323 MAIT L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 8.69e-01 0.0126 0.0761 0.323 MAIT L2
ENSG00000177889 UBE2N -974604 sc-eQTL 3.10e-01 -0.0948 0.0932 0.323 MAIT L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 3.55e-01 -0.0859 0.0926 0.323 MAIT L2
ENSG00000257242 LINC01619 324429 sc-eQTL 9.13e-01 0.00982 0.0897 0.323 MAIT L2
ENSG00000102189 EEA1 -461988 sc-eQTL 3.00e-01 -0.0978 0.0942 0.32 NK_CD56bright L2
ENSG00000133639 BTG1 321497 sc-eQTL 5.99e-01 0.034 0.0647 0.32 NK_CD56bright L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 1.23e-01 0.143 0.0924 0.32 NK_CD56bright L2
ENSG00000177889 UBE2N -974604 sc-eQTL 6.01e-01 0.0516 0.0986 0.32 NK_CD56bright L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 6.06e-01 -0.0472 0.0914 0.32 NK_CD56bright L2
ENSG00000257242 LINC01619 324429 sc-eQTL 6.74e-01 -0.0397 0.0943 0.32 NK_CD56bright L2
ENSG00000102189 EEA1 -461988 sc-eQTL 9.87e-01 0.0013 0.081 0.323 NK_CD56dim L2
ENSG00000133639 BTG1 321497 sc-eQTL 9.68e-01 -0.00199 0.0491 0.323 NK_CD56dim L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 4.19e-01 -0.0583 0.0719 0.323 NK_CD56dim L2
ENSG00000177889 UBE2N -974604 sc-eQTL 4.90e-01 0.0478 0.0691 0.323 NK_CD56dim L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 8.12e-01 0.0196 0.0825 0.323 NK_CD56dim L2
ENSG00000257242 LINC01619 324429 sc-eQTL 6.24e-01 0.0377 0.0768 0.323 NK_CD56dim L2
ENSG00000102189 EEA1 -461988 sc-eQTL 7.66e-01 0.0281 0.0945 0.32 NK_HLA L2
ENSG00000133639 BTG1 321497 sc-eQTL 4.71e-01 -0.0466 0.0646 0.32 NK_HLA L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 9.61e-01 0.00431 0.0873 0.32 NK_HLA L2
ENSG00000177889 UBE2N -974604 sc-eQTL 1.55e-01 0.139 0.0973 0.32 NK_HLA L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 2.95e-01 -0.104 0.0992 0.32 NK_HLA L2
ENSG00000257242 LINC01619 324429 sc-eQTL 2.32e-01 -0.105 0.0875 0.32 NK_HLA L2
ENSG00000102189 EEA1 -461988 sc-eQTL 2.64e-01 0.0945 0.0844 0.323 NK_cytokine L2
ENSG00000133639 BTG1 321497 sc-eQTL 8.75e-01 0.00817 0.0516 0.323 NK_cytokine L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 5.90e-01 -0.0388 0.0719 0.323 NK_cytokine L2
ENSG00000177889 UBE2N -974604 sc-eQTL 8.37e-01 -0.017 0.0827 0.323 NK_cytokine L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 3.19e-01 -0.0766 0.0767 0.323 NK_cytokine L2
ENSG00000257242 LINC01619 324429 sc-eQTL 6.89e-01 0.0313 0.078 0.323 NK_cytokine L2
ENSG00000102189 EEA1 -461988 sc-eQTL 7.35e-01 0.0403 0.119 0.3 PB L2
ENSG00000133639 BTG1 321497 sc-eQTL 4.81e-01 0.0414 0.0585 0.3 PB L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 4.11e-01 0.0786 0.0953 0.3 PB L2
ENSG00000177889 UBE2N -974604 sc-eQTL 8.37e-01 0.0173 0.0841 0.3 PB L2
ENSG00000187510 C12orf74 -235500 sc-eQTL 9.55e-01 0.00667 0.119 0.3 PB L2
ENSG00000205056 LINC02397 892 sc-eQTL 5.43e-01 0.0557 0.0914 0.3 PB L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 1.43e-01 0.148 0.101 0.3 PB L2
ENSG00000257242 LINC01619 324429 sc-eQTL 5.68e-01 -0.0634 0.111 0.3 PB L2
ENSG00000257345 LINC02413 -531875 sc-eQTL 4.99e-01 -0.0759 0.112 0.3 PB L2
ENSG00000277851 LINC02391 103511 sc-eQTL 8.08e-01 0.0273 0.112 0.3 PB L2
ENSG00000102189 EEA1 -461988 sc-eQTL 2.07e-01 -0.125 0.0987 0.32 Pro_T L2
ENSG00000133639 BTG1 321497 sc-eQTL 6.50e-01 0.0184 0.0405 0.32 Pro_T L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 4.56e-01 0.0571 0.0765 0.32 Pro_T L2
ENSG00000177889 UBE2N -974604 sc-eQTL 6.20e-01 -0.035 0.0705 0.32 Pro_T L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 4.01e-01 -0.0763 0.0906 0.32 Pro_T L2
ENSG00000257242 LINC01619 324429 sc-eQTL 6.67e-01 0.0363 0.0842 0.32 Pro_T L2
ENSG00000102189 EEA1 -461988 sc-eQTL 4.06e-01 0.0715 0.0859 0.323 Treg L2
ENSG00000133639 BTG1 321497 sc-eQTL 9.69e-01 0.00277 0.0708 0.323 Treg L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 4.03e-01 0.0612 0.073 0.323 Treg L2
ENSG00000177889 UBE2N -974604 sc-eQTL 4.64e-01 0.0578 0.0788 0.323 Treg L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 6.05e-01 -0.0459 0.0886 0.323 Treg L2
ENSG00000257242 LINC01619 324429 sc-eQTL 6.84e-01 0.0398 0.0976 0.323 Treg L2
ENSG00000102189 EEA1 -461988 sc-eQTL 5.43e-01 -0.0521 0.0856 0.322 cDC L2
ENSG00000133639 BTG1 321497 sc-eQTL 4.11e-01 -0.0625 0.0759 0.322 cDC L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 9.24e-01 0.00945 0.099 0.322 cDC L2
ENSG00000177889 UBE2N -974604 sc-eQTL 6.59e-01 -0.038 0.086 0.322 cDC L2
ENSG00000205056 LINC02397 892 sc-eQTL 2.35e-01 0.0714 0.0599 0.322 cDC L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 9.60e-01 0.00487 0.0978 0.322 cDC L2
ENSG00000257242 LINC01619 324429 sc-eQTL 2.32e-01 0.109 0.0908 0.322 cDC L2
ENSG00000277851 LINC02391 103511 sc-eQTL 8.12e-01 0.0211 0.0884 0.322 cDC L2
ENSG00000102189 EEA1 -461988 sc-eQTL 3.83e-01 -0.0491 0.0562 0.323 cMono_IL1B L2
ENSG00000133639 BTG1 321497 sc-eQTL 5.77e-01 0.0261 0.0467 0.323 cMono_IL1B L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 9.09e-01 0.00828 0.0721 0.323 cMono_IL1B L2
ENSG00000177889 UBE2N -974604 sc-eQTL 2.71e-01 -0.0622 0.0563 0.323 cMono_IL1B L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 3.54e-01 -0.0681 0.0733 0.323 cMono_IL1B L2
ENSG00000257242 LINC01619 324429 sc-eQTL 1.00e+00 -2.67e-05 0.0899 0.323 cMono_IL1B L2
ENSG00000102189 EEA1 -461988 sc-eQTL 4.51e-01 -0.0542 0.0719 0.323 cMono_S100A L2
ENSG00000133639 BTG1 321497 sc-eQTL 2.50e-01 0.0616 0.0534 0.323 cMono_S100A L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 5.25e-01 0.0526 0.0827 0.323 cMono_S100A L2
ENSG00000177889 UBE2N -974604 sc-eQTL 8.54e-01 -0.0133 0.072 0.323 cMono_S100A L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 8.37e-01 -0.016 0.0774 0.323 cMono_S100A L2
ENSG00000257242 LINC01619 324429 sc-eQTL 5.61e-01 -0.0543 0.0934 0.323 cMono_S100A L2
ENSG00000102189 EEA1 -461988 sc-eQTL 9.37e-01 0.00936 0.118 0.33 gdT L2
ENSG00000133639 BTG1 321497 sc-eQTL 8.25e-01 0.0139 0.063 0.33 gdT L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 3.42e-01 0.102 0.107 0.33 gdT L2
ENSG00000177889 UBE2N -974604 sc-eQTL 4.00e-01 -0.0985 0.117 0.33 gdT L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 7.86e-01 -0.0276 0.102 0.33 gdT L2
ENSG00000257242 LINC01619 324429 sc-eQTL 4.68e-01 0.0777 0.107 0.33 gdT L2
ENSG00000102189 EEA1 -461988 sc-eQTL 6.66e-01 -0.0368 0.0851 0.32 intMono L2
ENSG00000133639 BTG1 321497 sc-eQTL 4.87e-01 0.0374 0.0537 0.32 intMono L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 1.85e-01 0.115 0.0865 0.32 intMono L2
ENSG00000177889 UBE2N -974604 sc-eQTL 2.60e-02 -0.183 0.0817 0.32 intMono L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 4.14e-01 0.0696 0.085 0.32 intMono L2
ENSG00000257242 LINC01619 324429 sc-eQTL 4.75e-01 -0.0632 0.0882 0.32 intMono L2
ENSG00000102189 EEA1 -461988 sc-eQTL 8.69e-01 -0.0123 0.0746 0.317 ncMono L2
ENSG00000133639 BTG1 321497 sc-eQTL 4.73e-01 -0.0371 0.0516 0.317 ncMono L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 4.43e-01 0.0653 0.0849 0.317 ncMono L2
ENSG00000177889 UBE2N -974604 sc-eQTL 3.11e-01 0.084 0.0827 0.317 ncMono L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 2.74e-01 -0.0898 0.0819 0.317 ncMono L2
ENSG00000257242 LINC01619 324429 sc-eQTL 4.33e-01 0.0678 0.0864 0.317 ncMono L2
ENSG00000102189 EEA1 -461988 sc-eQTL 7.80e-01 -0.0282 0.101 0.328 pDC L2
ENSG00000133639 BTG1 321497 sc-eQTL 4.80e-01 -0.0698 0.0986 0.328 pDC L2
ENSG00000173598 NUDT4 -910540 sc-eQTL 8.21e-01 -0.0192 0.0847 0.328 pDC L2
ENSG00000177889 UBE2N -974604 sc-eQTL 4.03e-02 -0.205 0.0991 0.328 pDC L2
ENSG00000205056 LINC02397 892 sc-eQTL 4.50e-01 -0.0689 0.0909 0.328 pDC L2
ENSG00000245904 AC025164.1 321770 sc-eQTL 2.95e-01 -0.0969 0.0922 0.328 pDC L2
ENSG00000257242 LINC01619 324429 sc-eQTL 7.15e-01 0.0317 0.0865 0.328 pDC L2
ENSG00000277851 LINC02391 103511 sc-eQTL 7.92e-01 -0.0195 0.0738 0.328 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 -461988 sc-eQTL 9.29e-01 0.00612 0.0687 0.323 B_Memory LOneK1K
ENSG00000133639 BTG1 321497 sc-eQTL 6.82e-01 0.0187 0.0455 0.323 B_Memory LOneK1K
ENSG00000173598 NUDT4 -910540 sc-eQTL 4.07e-01 0.0513 0.0617 0.323 B_Memory LOneK1K
ENSG00000177889 UBE2N -974604 sc-eQTL 1.49e-01 0.0811 0.056 0.323 B_Memory LOneK1K
ENSG00000187510 C12orf74 -235500 sc-eQTL 1.70e-01 0.0995 0.0723 0.323 B_Memory LOneK1K
ENSG00000205056 LINC02397 892 sc-eQTL 6.12e-04 -0.216 0.0621 0.323 B_Memory LOneK1K
ENSG00000245904 AC025164.1 321770 sc-eQTL 8.29e-02 0.115 0.0658 0.323 B_Memory LOneK1K
ENSG00000257242 LINC01619 324429 sc-eQTL 4.95e-01 -0.0433 0.0634 0.323 B_Memory LOneK1K
ENSG00000257345 LINC02413 -531875 sc-eQTL 9.56e-01 0.00522 0.0956 0.323 B_Memory LOneK1K
ENSG00000277851 LINC02391 103511 sc-eQTL 3.39e-01 0.0925 0.0964 0.323 B_Memory LOneK1K
ENSG00000102189 EEA1 -461988 sc-eQTL 5.27e-01 0.0483 0.0763 0.323 B_Naive LOneK1K
ENSG00000133639 BTG1 321497 sc-eQTL 7.31e-02 0.078 0.0433 0.323 B_Naive LOneK1K
ENSG00000173598 NUDT4 -910540 sc-eQTL 1.75e-01 0.0978 0.0719 0.323 B_Naive LOneK1K
ENSG00000177889 UBE2N -974604 sc-eQTL 9.27e-01 0.00675 0.074 0.323 B_Naive LOneK1K
ENSG00000187510 C12orf74 -235500 sc-eQTL 6.92e-01 0.0358 0.0904 0.323 B_Naive LOneK1K
ENSG00000205056 LINC02397 892 sc-eQTL 2.18e-07 -0.217 0.0404 0.323 B_Naive LOneK1K
ENSG00000245904 AC025164.1 321770 sc-eQTL 1.15e-01 0.104 0.0654 0.323 B_Naive LOneK1K
ENSG00000257242 LINC01619 324429 sc-eQTL 8.37e-01 0.0132 0.064 0.323 B_Naive LOneK1K
ENSG00000257345 LINC02413 -531875 sc-eQTL 7.77e-01 -0.0266 0.0937 0.323 B_Naive LOneK1K
ENSG00000277851 LINC02391 103511 sc-eQTL 4.32e-01 0.0682 0.0867 0.323 B_Naive LOneK1K
ENSG00000102189 EEA1 -461988 sc-eQTL 2.84e-01 -0.0557 0.0519 0.323 CD14_Mono LOneK1K
ENSG00000133639 BTG1 321497 sc-eQTL 3.68e-01 0.04 0.0443 0.323 CD14_Mono LOneK1K
ENSG00000173598 NUDT4 -910540 sc-eQTL 7.03e-01 0.0271 0.0712 0.323 CD14_Mono LOneK1K
ENSG00000177889 UBE2N -974604 sc-eQTL 3.42e-01 -0.051 0.0535 0.323 CD14_Mono LOneK1K
ENSG00000245904 AC025164.1 321770 sc-eQTL 5.36e-01 -0.0435 0.0701 0.323 CD14_Mono LOneK1K
ENSG00000257242 LINC01619 324429 sc-eQTL 8.25e-01 -0.0193 0.0873 0.323 CD14_Mono LOneK1K
ENSG00000102189 EEA1 -461988 sc-eQTL 7.14e-01 0.0252 0.0686 0.321 CD16_Mono LOneK1K
ENSG00000133639 BTG1 321497 sc-eQTL 7.75e-01 0.0126 0.044 0.321 CD16_Mono LOneK1K
ENSG00000173598 NUDT4 -910540 sc-eQTL 1.28e-01 0.118 0.0772 0.321 CD16_Mono LOneK1K
ENSG00000177889 UBE2N -974604 sc-eQTL 8.83e-01 -0.0115 0.0777 0.321 CD16_Mono LOneK1K
ENSG00000245904 AC025164.1 321770 sc-eQTL 6.85e-01 -0.031 0.0764 0.321 CD16_Mono LOneK1K
ENSG00000257242 LINC01619 324429 sc-eQTL 8.07e-01 -0.0222 0.0905 0.321 CD16_Mono LOneK1K
ENSG00000102189 EEA1 -461988 sc-eQTL 6.66e-01 0.0302 0.07 0.323 NK_CD56dim LOneK1K
ENSG00000133639 BTG1 321497 sc-eQTL 8.08e-01 0.0112 0.0459 0.323 NK_CD56dim LOneK1K
ENSG00000173598 NUDT4 -910540 sc-eQTL 5.51e-01 -0.0378 0.0633 0.323 NK_CD56dim LOneK1K
ENSG00000177889 UBE2N -974604 sc-eQTL 3.94e-01 0.0523 0.0612 0.323 NK_CD56dim LOneK1K
ENSG00000245904 AC025164.1 321770 sc-eQTL 5.36e-01 -0.0423 0.0683 0.323 NK_CD56dim LOneK1K
ENSG00000257242 LINC01619 324429 sc-eQTL 8.43e-01 0.0133 0.0673 0.323 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000205056 LINC02397 892 eQTL 3.75e-09 -0.106 0.0178 0.0 0.0 0.327

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000205056 LINC02397 892 0.000198 0.000249 4.16e-05 9.54e-05 5.62e-05 8.03e-05 0.00023 5.09e-05 0.000224 0.000146 0.000276 0.000121 0.00034 8.78e-05 4.91e-05 0.000188 9.51e-05 0.000172 6.43e-05 5.47e-05 0.000138 0.000269 0.000185 7.65e-05 0.0003 8.64e-05 0.000133 9.93e-05 0.000203 9.85e-05 0.000135 1.45e-05 2.04e-05 4.97e-05 5.87e-05 4.26e-05 2.58e-05 2.57e-05 3.8e-05 1.85e-05 1.74e-05 0.00025 2.55e-05 2.99e-06 2.49e-05 3.86e-05 3.49e-05 1.74e-05 1.36e-05