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Genes within 1Mb (chr12:92149234:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000102189 EEA1 -780097 sc-eQTL 5.47e-01 -0.125 0.207 0.054 B_Activated L2
ENSG00000133639 BTG1 3388 sc-eQTL 8.60e-01 -0.0192 0.108 0.054 B_Activated L2
ENSG00000187510 C12orf74 -553609 sc-eQTL 1.80e-01 0.256 0.19 0.054 B_Activated L2
ENSG00000205056 LINC02397 -317217 sc-eQTL 4.35e-01 -0.155 0.199 0.054 B_Activated L2
ENSG00000245904 AC025164.1 3661 sc-eQTL 5.52e-01 -0.126 0.211 0.054 B_Activated L2
ENSG00000257242 LINC01619 6320 sc-eQTL 6.94e-01 0.0647 0.164 0.054 B_Activated L2
ENSG00000257345 LINC02413 -849984 sc-eQTL 5.01e-02 0.416 0.211 0.054 B_Activated L2
ENSG00000277851 LINC02391 -214598 sc-eQTL 4.59e-01 -0.131 0.177 0.054 B_Activated L2
ENSG00000102189 EEA1 -780097 sc-eQTL 9.60e-01 0.0102 0.205 0.05 CD8_TEM L2
ENSG00000133639 BTG1 3388 sc-eQTL 2.00e-01 0.181 0.141 0.05 CD8_TEM L2
ENSG00000245904 AC025164.1 3661 sc-eQTL 4.42e-01 -0.161 0.209 0.05 CD8_TEM L2
ENSG00000257242 LINC01619 6320 sc-eQTL 9.85e-01 0.00363 0.193 0.05 CD8_TEM L2
ENSG00000102189 EEA1 -780097 sc-eQTL 5.62e-01 0.11 0.189 0.05 NK_HLA L2
ENSG00000133639 BTG1 3388 sc-eQTL 7.16e-01 0.0473 0.13 0.05 NK_HLA L2
ENSG00000245904 AC025164.1 3661 sc-eQTL 1.82e-01 0.266 0.199 0.05 NK_HLA L2
ENSG00000257242 LINC01619 6320 sc-eQTL 2.07e-01 0.222 0.176 0.05 NK_HLA L2
ENSG00000102189 EEA1 -780097 sc-eQTL 9.51e-02 0.367 0.218 0.059 PB L2
ENSG00000133639 BTG1 3388 sc-eQTL 6.63e-01 0.0476 0.109 0.059 PB L2
ENSG00000187510 C12orf74 -553609 sc-eQTL 6.57e-01 -0.0979 0.22 0.059 PB L2
ENSG00000205056 LINC02397 -317217 sc-eQTL 7.41e-01 0.0562 0.17 0.059 PB L2
ENSG00000245904 AC025164.1 3661 sc-eQTL 4.88e-01 -0.131 0.188 0.059 PB L2
ENSG00000257242 LINC01619 6320 sc-eQTL 8.26e-01 -0.0454 0.206 0.059 PB L2
ENSG00000257345 LINC02413 -849984 sc-eQTL 6.17e-01 0.104 0.208 0.059 PB L2
ENSG00000277851 LINC02391 -214598 sc-eQTL 8.81e-02 -0.353 0.205 0.059 PB L2
ENSG00000102189 EEA1 -780097 sc-eQTL 9.12e-01 -0.0264 0.239 0.052 gdT L2
ENSG00000133639 BTG1 3388 sc-eQTL 5.03e-01 -0.0853 0.127 0.052 gdT L2
ENSG00000245904 AC025164.1 3661 sc-eQTL 6.60e-01 -0.0903 0.205 0.052 gdT L2
ENSG00000257242 LINC01619 6320 sc-eQTL 9.63e-02 -0.358 0.214 0.052 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000133639 \N 3388 3.86e-05 3.47e-05 6.39e-06 1.61e-05 5.76e-06 1.52e-05 4.59e-05 5.02e-06 3.38e-05 1.64e-05 4.06e-05 1.82e-05 5.08e-05 1.41e-05 6.78e-06 2.12e-05 1.8e-05 2.59e-05 7.92e-06 7.07e-06 1.5e-05 3.72e-05 3.36e-05 9.6e-06 4.66e-05 7.99e-06 1.53e-05 1.31e-05 3.42e-05 2.59e-05 2.16e-05 1.64e-06 2.68e-06 7.05e-06 1.2e-05 5.9e-06 3.09e-06 3.14e-06 4.58e-06 3.57e-06 1.77e-06 3.94e-05 3.55e-06 3.62e-07 2.59e-06 3.94e-06 4.04e-06 1.6e-06 1.48e-06