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Genes within 1Mb (chr12:91923321:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -222525 sc-eQTL 1.44e-01 0.0628 0.0428 0.256 B L1
ENSG00000187510 C12orf74 -779522 sc-eQTL 7.27e-01 0.0209 0.0596 0.256 B L1
ENSG00000205056 LINC02397 -543130 sc-eQTL 2.59e-01 -0.0459 0.0406 0.256 B L1
ENSG00000245904 AC025164.1 -222252 sc-eQTL 1.07e-01 0.0941 0.0581 0.256 B L1
ENSG00000257242 LINC01619 -219593 sc-eQTL 2.13e-01 -0.0687 0.0551 0.256 B L1
ENSG00000277851 LINC02391 -440511 sc-eQTL 2.32e-01 -0.0962 0.0803 0.256 B L1
ENSG00000133639 BTG1 -222525 sc-eQTL 1.28e-02 -0.134 0.0532 0.256 CD4T L1
ENSG00000245904 AC025164.1 -222252 sc-eQTL 3.47e-01 -0.0695 0.0737 0.256 CD4T L1
ENSG00000257242 LINC01619 -219593 sc-eQTL 4.74e-01 -0.0494 0.0688 0.256 CD4T L1
ENSG00000133639 BTG1 -222525 sc-eQTL 5.38e-01 -0.0327 0.053 0.256 CD8T L1
ENSG00000245904 AC025164.1 -222252 sc-eQTL 6.87e-01 0.0278 0.069 0.256 CD8T L1
ENSG00000257242 LINC01619 -219593 sc-eQTL 7.17e-01 0.0258 0.0712 0.256 CD8T L1
ENSG00000133639 BTG1 -222525 sc-eQTL 6.30e-01 0.0432 0.0895 0.266 DC L1
ENSG00000205056 LINC02397 -543130 sc-eQTL 6.00e-01 0.0448 0.0853 0.266 DC L1
ENSG00000245904 AC025164.1 -222252 sc-eQTL 2.18e-01 0.119 0.0967 0.266 DC L1
ENSG00000257242 LINC01619 -219593 sc-eQTL 9.07e-01 0.0109 0.0929 0.266 DC L1
ENSG00000277851 LINC02391 -440511 sc-eQTL 6.87e-01 -0.0354 0.0879 0.266 DC L1
ENSG00000133639 BTG1 -222525 sc-eQTL 9.60e-01 0.00215 0.0423 0.256 Mono L1
ENSG00000245904 AC025164.1 -222252 sc-eQTL 8.34e-01 -0.0145 0.0689 0.256 Mono L1
ENSG00000257242 LINC01619 -219593 sc-eQTL 4.29e-01 -0.067 0.0845 0.256 Mono L1
ENSG00000133639 BTG1 -222525 sc-eQTL 2.95e-01 -0.0517 0.0493 0.255 NK L1
ENSG00000245904 AC025164.1 -222252 sc-eQTL 1.84e-01 0.0909 0.0683 0.255 NK L1
ENSG00000257242 LINC01619 -219593 sc-eQTL 9.11e-01 -0.00765 0.0682 0.255 NK L1
ENSG00000133639 BTG1 -222525 sc-eQTL 6.90e-01 -0.0165 0.0413 0.256 Other_T L1
ENSG00000245904 AC025164.1 -222252 sc-eQTL 9.33e-02 -0.146 0.0868 0.256 Other_T L1
ENSG00000257242 LINC01619 -219593 sc-eQTL 5.14e-01 0.0537 0.0821 0.256 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -222525 sc-eQTL 6.11e-01 0.0272 0.0534 0.27 B_Activated L2
ENSG00000187510 C12orf74 -779522 sc-eQTL 4.68e-01 -0.0684 0.0942 0.27 B_Activated L2
ENSG00000205056 LINC02397 -543130 sc-eQTL 3.23e-02 -0.209 0.0969 0.27 B_Activated L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 2.16e-01 0.129 0.104 0.27 B_Activated L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 4.71e-01 -0.0585 0.0809 0.27 B_Activated L2
ENSG00000277851 LINC02391 -440511 sc-eQTL 8.80e-01 -0.0132 0.0871 0.27 B_Activated L2
ENSG00000133639 BTG1 -222525 sc-eQTL 2.76e-01 0.0577 0.0528 0.255 B_Intermediate L2
ENSG00000187510 C12orf74 -779522 sc-eQTL 1.34e-02 0.225 0.0903 0.255 B_Intermediate L2
ENSG00000205056 LINC02397 -543130 sc-eQTL 4.07e-02 -0.138 0.0671 0.255 B_Intermediate L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 4.00e-01 0.0626 0.0742 0.255 B_Intermediate L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 2.24e-01 -0.0887 0.0727 0.255 B_Intermediate L2
ENSG00000277851 LINC02391 -440511 sc-eQTL 2.40e-01 -0.112 0.0951 0.255 B_Intermediate L2
ENSG00000133639 BTG1 -222525 sc-eQTL 1.34e-01 0.0733 0.0487 0.256 B_Memory L2
ENSG00000187510 C12orf74 -779522 sc-eQTL 3.01e-01 -0.0882 0.085 0.256 B_Memory L2
ENSG00000205056 LINC02397 -543130 sc-eQTL 8.01e-01 0.0208 0.0827 0.256 B_Memory L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 7.92e-03 0.229 0.0855 0.256 B_Memory L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 8.41e-01 -0.0156 0.0779 0.256 B_Memory L2
ENSG00000277851 LINC02391 -440511 sc-eQTL 6.77e-01 0.0389 0.0933 0.256 B_Memory L2
ENSG00000133639 BTG1 -222525 sc-eQTL 4.79e-02 0.0966 0.0485 0.256 B_Naive1 L2
ENSG00000187510 C12orf74 -779522 sc-eQTL 5.22e-01 0.0555 0.0864 0.256 B_Naive1 L2
ENSG00000205056 LINC02397 -543130 sc-eQTL 7.90e-02 -0.0923 0.0523 0.256 B_Naive1 L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 1.04e-01 0.115 0.0704 0.256 B_Naive1 L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 9.80e-01 -0.00179 0.0703 0.256 B_Naive1 L2
ENSG00000277851 LINC02391 -440511 sc-eQTL 9.42e-01 0.00634 0.0864 0.256 B_Naive1 L2
ENSG00000133639 BTG1 -222525 sc-eQTL 2.35e-01 0.057 0.0479 0.255 B_Naive2 L2
ENSG00000187510 C12orf74 -779522 sc-eQTL 8.46e-01 0.0136 0.0699 0.255 B_Naive2 L2
ENSG00000205056 LINC02397 -543130 sc-eQTL 4.99e-01 0.034 0.0501 0.255 B_Naive2 L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 9.75e-01 -0.00246 0.0791 0.255 B_Naive2 L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 7.68e-01 -0.0224 0.0758 0.255 B_Naive2 L2
ENSG00000277851 LINC02391 -440511 sc-eQTL 1.47e-01 -0.136 0.0932 0.255 B_Naive2 L2
ENSG00000133639 BTG1 -222525 sc-eQTL 9.08e-01 -0.00741 0.0643 0.264 CD4_CTL L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 2.80e-01 0.109 0.101 0.264 CD4_CTL L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 8.71e-02 -0.156 0.0904 0.264 CD4_CTL L2
ENSG00000133639 BTG1 -222525 sc-eQTL 3.59e-02 -0.114 0.0541 0.256 CD4_Naive L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 4.99e-01 -0.0501 0.074 0.256 CD4_Naive L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 9.49e-01 -0.00459 0.0712 0.256 CD4_Naive L2
ENSG00000133639 BTG1 -222525 sc-eQTL 5.32e-02 -0.1 0.0515 0.256 CD4_TCM L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 4.77e-02 -0.154 0.0772 0.256 CD4_TCM L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 6.79e-01 -0.0279 0.0672 0.256 CD4_TCM L2
ENSG00000133639 BTG1 -222525 sc-eQTL 1.44e-01 -0.0942 0.0642 0.256 CD4_TEM L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 2.30e-01 -0.114 0.0943 0.256 CD4_TEM L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 1.03e-01 -0.148 0.0903 0.256 CD4_TEM L2
ENSG00000133639 BTG1 -222525 sc-eQTL 3.35e-01 -0.0516 0.0534 0.256 CD8_CTL L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 9.25e-01 -0.00833 0.0878 0.256 CD8_CTL L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 2.63e-01 -0.0887 0.0791 0.256 CD8_CTL L2
ENSG00000133639 BTG1 -222525 sc-eQTL 1.11e-01 -0.108 0.0674 0.256 CD8_Naive L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 8.21e-01 -0.019 0.0842 0.256 CD8_Naive L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 3.80e-01 0.0752 0.0854 0.256 CD8_Naive L2
ENSG00000133639 BTG1 -222525 sc-eQTL 5.06e-01 -0.049 0.0735 0.266 CD8_TCM L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 6.16e-01 -0.0509 0.101 0.266 CD8_TCM L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 5.30e-01 -0.0637 0.101 0.266 CD8_TCM L2
ENSG00000133639 BTG1 -222525 sc-eQTL 4.58e-01 -0.0531 0.0713 0.256 CD8_TEM L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 8.29e-01 0.0229 0.106 0.256 CD8_TEM L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 6.97e-01 0.0381 0.0978 0.256 CD8_TEM L2
ENSG00000133639 BTG1 -222525 sc-eQTL 3.93e-02 -0.128 0.0615 0.26 MAIT L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 1.83e-01 -0.125 0.0933 0.26 MAIT L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 7.20e-01 -0.0325 0.0906 0.26 MAIT L2
ENSG00000133639 BTG1 -222525 sc-eQTL 3.57e-01 0.0607 0.0658 0.247 NK_CD56bright L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 3.28e-02 0.198 0.0921 0.247 NK_CD56bright L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 6.71e-01 0.0408 0.096 0.247 NK_CD56bright L2
ENSG00000133639 BTG1 -222525 sc-eQTL 5.26e-01 -0.0318 0.05 0.254 NK_CD56dim L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 1.59e-02 0.202 0.0829 0.254 NK_CD56dim L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 3.59e-01 -0.0719 0.0782 0.254 NK_CD56dim L2
ENSG00000133639 BTG1 -222525 sc-eQTL 7.20e-01 0.0244 0.068 0.242 NK_HLA L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 1.34e-01 -0.156 0.104 0.242 NK_HLA L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 1.13e-01 -0.146 0.0918 0.242 NK_HLA L2
ENSG00000133639 BTG1 -222525 sc-eQTL 2.42e-01 -0.0618 0.0527 0.254 NK_cytokine L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 4.27e-01 -0.0625 0.0785 0.254 NK_cytokine L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 1.79e-01 0.107 0.0795 0.254 NK_cytokine L2
ENSG00000133639 BTG1 -222525 sc-eQTL 7.31e-01 0.0201 0.0583 0.278 PB L2
ENSG00000187510 C12orf74 -779522 sc-eQTL 6.97e-01 0.046 0.118 0.278 PB L2
ENSG00000205056 LINC02397 -543130 sc-eQTL 9.68e-01 -0.00362 0.091 0.278 PB L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 4.56e-01 0.0753 0.101 0.278 PB L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 6.03e-01 -0.0574 0.11 0.278 PB L2
ENSG00000277851 LINC02391 -440511 sc-eQTL 1.03e-01 0.181 0.11 0.278 PB L2
ENSG00000133639 BTG1 -222525 sc-eQTL 7.30e-01 0.0142 0.041 0.257 Pro_T L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 1.92e-01 -0.12 0.0915 0.257 Pro_T L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 3.16e-01 0.0855 0.0851 0.257 Pro_T L2
ENSG00000133639 BTG1 -222525 sc-eQTL 1.07e-01 -0.116 0.0719 0.256 Treg L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 6.73e-01 0.0383 0.0905 0.256 Treg L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 7.53e-01 -0.0315 0.0998 0.256 Treg L2
ENSG00000133639 BTG1 -222525 sc-eQTL 2.68e-01 -0.0861 0.0774 0.263 cDC L2
ENSG00000205056 LINC02397 -543130 sc-eQTL 2.70e-01 0.0677 0.0612 0.263 cDC L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 2.71e-01 0.11 0.0997 0.263 cDC L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 4.30e-01 0.0736 0.093 0.263 cDC L2
ENSG00000277851 LINC02391 -440511 sc-eQTL 9.57e-01 -0.00492 0.0903 0.263 cDC L2
ENSG00000133639 BTG1 -222525 sc-eQTL 6.03e-01 -0.0248 0.0476 0.256 cMono_IL1B L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 8.52e-01 -0.014 0.0748 0.256 cMono_IL1B L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 7.81e-01 -0.0255 0.0916 0.256 cMono_IL1B L2
ENSG00000133639 BTG1 -222525 sc-eQTL 5.76e-01 0.0309 0.0552 0.256 cMono_S100A L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 9.29e-01 0.00714 0.0799 0.256 cMono_S100A L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 7.73e-01 0.0278 0.0964 0.256 cMono_S100A L2
ENSG00000133639 BTG1 -222525 sc-eQTL 4.12e-01 0.0567 0.0689 0.233 gdT L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 5.53e-01 -0.0661 0.111 0.233 gdT L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 7.23e-02 -0.21 0.116 0.233 gdT L2
ENSG00000133639 BTG1 -222525 sc-eQTL 9.79e-01 -0.00149 0.0564 0.26 intMono L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 5.88e-01 0.0485 0.0893 0.26 intMono L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 5.26e-01 -0.0588 0.0926 0.26 intMono L2
ENSG00000133639 BTG1 -222525 sc-eQTL 6.61e-01 0.0242 0.0551 0.256 ncMono L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 7.94e-01 -0.023 0.0876 0.256 ncMono L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 5.70e-01 -0.0525 0.0923 0.256 ncMono L2
ENSG00000133639 BTG1 -222525 sc-eQTL 3.77e-03 0.303 0.103 0.266 pDC L2
ENSG00000205056 LINC02397 -543130 sc-eQTL 9.51e-01 -0.00596 0.0977 0.266 pDC L2
ENSG00000245904 AC025164.1 -222252 sc-eQTL 1.77e-01 0.134 0.0987 0.266 pDC L2
ENSG00000257242 LINC01619 -219593 sc-eQTL 1.57e-01 -0.131 0.0922 0.266 pDC L2
ENSG00000277851 LINC02391 -440511 sc-eQTL 4.86e-01 -0.0551 0.079 0.266 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -222525 sc-eQTL 3.30e-01 0.0449 0.046 0.256 B_Memory LOneK1K
ENSG00000187510 C12orf74 -779522 sc-eQTL 4.94e-01 0.0503 0.0735 0.256 B_Memory LOneK1K
ENSG00000205056 LINC02397 -543130 sc-eQTL 6.29e-02 -0.12 0.0642 0.256 B_Memory LOneK1K
ENSG00000245904 AC025164.1 -222252 sc-eQTL 1.56e-02 0.161 0.0662 0.256 B_Memory LOneK1K
ENSG00000257242 LINC01619 -219593 sc-eQTL 1.33e-01 -0.0965 0.064 0.256 B_Memory LOneK1K
ENSG00000277851 LINC02391 -440511 sc-eQTL 5.37e-01 -0.0605 0.0978 0.256 B_Memory LOneK1K
ENSG00000133639 BTG1 -222525 sc-eQTL 1.15e-01 0.0684 0.0432 0.256 B_Naive LOneK1K
ENSG00000187510 C12orf74 -779522 sc-eQTL 6.85e-01 0.0366 0.0901 0.256 B_Naive LOneK1K
ENSG00000205056 LINC02397 -543130 sc-eQTL 3.62e-01 -0.0392 0.0429 0.256 B_Naive LOneK1K
ENSG00000245904 AC025164.1 -222252 sc-eQTL 1.77e-01 0.0884 0.0653 0.256 B_Naive LOneK1K
ENSG00000257242 LINC01619 -219593 sc-eQTL 8.52e-01 -0.012 0.0638 0.256 B_Naive LOneK1K
ENSG00000277851 LINC02391 -440511 sc-eQTL 3.13e-01 -0.0874 0.0863 0.256 B_Naive LOneK1K
ENSG00000133639 BTG1 -222525 sc-eQTL 9.00e-01 -0.00571 0.0454 0.256 CD14_Mono LOneK1K
ENSG00000245904 AC025164.1 -222252 sc-eQTL 8.07e-01 -0.0175 0.0717 0.256 CD14_Mono LOneK1K
ENSG00000257242 LINC01619 -219593 sc-eQTL 9.43e-01 0.00634 0.0893 0.256 CD14_Mono LOneK1K
ENSG00000133639 BTG1 -222525 sc-eQTL 7.73e-01 0.0135 0.0468 0.256 CD16_Mono LOneK1K
ENSG00000245904 AC025164.1 -222252 sc-eQTL 7.21e-01 -0.0291 0.0812 0.256 CD16_Mono LOneK1K
ENSG00000257242 LINC01619 -219593 sc-eQTL 4.51e-01 -0.0725 0.0961 0.256 CD16_Mono LOneK1K
ENSG00000133639 BTG1 -222525 sc-eQTL 2.33e-01 -0.056 0.0468 0.254 NK_CD56dim LOneK1K
ENSG00000245904 AC025164.1 -222252 sc-eQTL 4.78e-01 0.0497 0.0698 0.254 NK_CD56dim LOneK1K
ENSG00000257242 LINC01619 -219593 sc-eQTL 8.91e-01 -0.00944 0.0687 0.254 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000257242 LINC01619 -219593 eQTL 0.0375 -0.0326 0.0157 0.0 0.0 0.282

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina