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Genes within 1Mb (chr12:91912912:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -232934 sc-eQTL 9.06e-01 -0.00544 0.0462 0.786 B L1
ENSG00000187510 C12orf74 -789931 sc-eQTL 4.03e-02 0.131 0.0634 0.786 B L1
ENSG00000205056 LINC02397 -553539 sc-eQTL 2.09e-02 0.1 0.0431 0.786 B L1
ENSG00000245904 AC025164.1 -232661 sc-eQTL 9.90e-01 -0.000762 0.0627 0.786 B L1
ENSG00000257242 LINC01619 -230002 sc-eQTL 3.88e-02 0.122 0.0587 0.786 B L1
ENSG00000277851 LINC02391 -450920 sc-eQTL 9.95e-01 0.000572 0.0864 0.786 B L1
ENSG00000133639 BTG1 -232934 sc-eQTL 7.10e-01 0.0215 0.0578 0.786 CD4T L1
ENSG00000245904 AC025164.1 -232661 sc-eQTL 3.35e-01 0.0762 0.0789 0.786 CD4T L1
ENSG00000257242 LINC01619 -230002 sc-eQTL 6.23e-01 -0.0363 0.0738 0.786 CD4T L1
ENSG00000133639 BTG1 -232934 sc-eQTL 5.30e-01 -0.0351 0.0559 0.786 CD8T L1
ENSG00000245904 AC025164.1 -232661 sc-eQTL 7.88e-01 0.0196 0.0728 0.786 CD8T L1
ENSG00000257242 LINC01619 -230002 sc-eQTL 2.61e-01 -0.0846 0.075 0.786 CD8T L1
ENSG00000133639 BTG1 -232934 sc-eQTL 7.49e-01 0.0313 0.0977 0.793 DC L1
ENSG00000205056 LINC02397 -553539 sc-eQTL 1.48e-01 0.135 0.0927 0.793 DC L1
ENSG00000245904 AC025164.1 -232661 sc-eQTL 8.24e-01 0.0235 0.106 0.793 DC L1
ENSG00000257242 LINC01619 -230002 sc-eQTL 7.09e-01 0.0379 0.101 0.793 DC L1
ENSG00000277851 LINC02391 -450920 sc-eQTL 7.62e-01 -0.0291 0.0959 0.793 DC L1
ENSG00000133639 BTG1 -232934 sc-eQTL 7.43e-01 0.0146 0.0444 0.786 Mono L1
ENSG00000245904 AC025164.1 -232661 sc-eQTL 3.98e-01 -0.0612 0.0722 0.786 Mono L1
ENSG00000257242 LINC01619 -230002 sc-eQTL 3.42e-01 0.0845 0.0887 0.786 Mono L1
ENSG00000133639 BTG1 -232934 sc-eQTL 9.32e-01 0.00442 0.0518 0.785 NK L1
ENSG00000245904 AC025164.1 -232661 sc-eQTL 6.63e-01 0.0314 0.0719 0.785 NK L1
ENSG00000257242 LINC01619 -230002 sc-eQTL 5.43e-01 0.0436 0.0715 0.785 NK L1
ENSG00000133639 BTG1 -232934 sc-eQTL 4.51e-01 0.0328 0.0435 0.786 Other_T L1
ENSG00000245904 AC025164.1 -232661 sc-eQTL 8.55e-01 0.0168 0.0921 0.786 Other_T L1
ENSG00000257242 LINC01619 -230002 sc-eQTL 6.94e-01 -0.0341 0.0865 0.786 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -232934 sc-eQTL 8.42e-01 -0.0115 0.0575 0.776 B_Activated L2
ENSG00000187510 C12orf74 -789931 sc-eQTL 6.15e-01 0.0511 0.101 0.776 B_Activated L2
ENSG00000205056 LINC02397 -553539 sc-eQTL 9.31e-01 -0.00909 0.106 0.776 B_Activated L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 5.85e-01 -0.0612 0.112 0.776 B_Activated L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 9.15e-01 -0.00931 0.0872 0.776 B_Activated L2
ENSG00000277851 LINC02391 -450920 sc-eQTL 7.38e-01 0.0314 0.0937 0.776 B_Activated L2
ENSG00000133639 BTG1 -232934 sc-eQTL 8.67e-01 -0.0096 0.0574 0.785 B_Intermediate L2
ENSG00000187510 C12orf74 -789931 sc-eQTL 8.18e-02 0.173 0.0987 0.785 B_Intermediate L2
ENSG00000205056 LINC02397 -553539 sc-eQTL 5.59e-02 0.14 0.0729 0.785 B_Intermediate L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 8.38e-01 -0.0165 0.0806 0.785 B_Intermediate L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 6.04e-01 0.0411 0.0791 0.785 B_Intermediate L2
ENSG00000277851 LINC02391 -450920 sc-eQTL 3.80e-01 -0.0909 0.103 0.785 B_Intermediate L2
ENSG00000133639 BTG1 -232934 sc-eQTL 4.27e-01 -0.0415 0.0521 0.789 B_Memory L2
ENSG00000187510 C12orf74 -789931 sc-eQTL 6.19e-02 0.169 0.0901 0.789 B_Memory L2
ENSG00000205056 LINC02397 -553539 sc-eQTL 8.77e-01 -0.0136 0.0882 0.789 B_Memory L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 1.98e-01 -0.119 0.0924 0.789 B_Memory L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 4.33e-01 -0.0652 0.0829 0.789 B_Memory L2
ENSG00000277851 LINC02391 -450920 sc-eQTL 1.16e-01 0.156 0.0989 0.789 B_Memory L2
ENSG00000133639 BTG1 -232934 sc-eQTL 2.50e-01 -0.0603 0.0523 0.786 B_Naive1 L2
ENSG00000187510 C12orf74 -789931 sc-eQTL 1.38e-02 0.227 0.0913 0.786 B_Naive1 L2
ENSG00000205056 LINC02397 -553539 sc-eQTL 1.99e-01 0.0724 0.0562 0.786 B_Naive1 L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 4.71e-01 -0.0547 0.0758 0.786 B_Naive1 L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 3.38e-01 0.072 0.0751 0.786 B_Naive1 L2
ENSG00000277851 LINC02391 -450920 sc-eQTL 9.21e-01 -0.0092 0.0925 0.786 B_Naive1 L2
ENSG00000133639 BTG1 -232934 sc-eQTL 8.14e-02 0.0886 0.0506 0.785 B_Naive2 L2
ENSG00000187510 C12orf74 -789931 sc-eQTL 4.07e-01 -0.0615 0.074 0.785 B_Naive2 L2
ENSG00000205056 LINC02397 -553539 sc-eQTL 2.67e-01 0.059 0.053 0.785 B_Naive2 L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 9.77e-01 -0.00242 0.0839 0.785 B_Naive2 L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 1.45e-01 0.117 0.0799 0.785 B_Naive2 L2
ENSG00000277851 LINC02391 -450920 sc-eQTL 3.70e-01 -0.0891 0.0991 0.785 B_Naive2 L2
ENSG00000133639 BTG1 -232934 sc-eQTL 2.02e-01 0.0895 0.07 0.782 CD4_CTL L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 5.94e-01 -0.0588 0.11 0.782 CD4_CTL L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 8.29e-01 -0.0215 0.0996 0.782 CD4_CTL L2
ENSG00000133639 BTG1 -232934 sc-eQTL 6.10e-01 0.03 0.0587 0.786 CD4_Naive L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 5.12e-01 0.0522 0.0795 0.786 CD4_Naive L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 4.52e-01 -0.0576 0.0764 0.786 CD4_Naive L2
ENSG00000133639 BTG1 -232934 sc-eQTL 6.97e-01 -0.0217 0.0556 0.786 CD4_TCM L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 5.91e-01 0.0449 0.0834 0.786 CD4_TCM L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 9.45e-01 -0.00497 0.0719 0.786 CD4_TCM L2
ENSG00000133639 BTG1 -232934 sc-eQTL 9.79e-01 0.00176 0.0683 0.786 CD4_TEM L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 9.04e-01 0.0121 0.1 0.786 CD4_TEM L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 8.12e-01 -0.0229 0.0963 0.786 CD4_TEM L2
ENSG00000133639 BTG1 -232934 sc-eQTL 5.64e-01 -0.0327 0.0567 0.786 CD8_CTL L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 7.21e-01 -0.0333 0.093 0.786 CD8_CTL L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 8.38e-01 0.0172 0.084 0.786 CD8_CTL L2
ENSG00000133639 BTG1 -232934 sc-eQTL 4.27e-01 0.0566 0.0712 0.786 CD8_Naive L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 9.92e-01 0.000934 0.0885 0.786 CD8_Naive L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 5.35e-01 -0.0558 0.0899 0.786 CD8_Naive L2
ENSG00000133639 BTG1 -232934 sc-eQTL 7.84e-01 -0.0208 0.0759 0.78 CD8_TCM L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 3.81e-01 -0.0916 0.104 0.78 CD8_TCM L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 1.97e-01 -0.135 0.104 0.78 CD8_TCM L2
ENSG00000133639 BTG1 -232934 sc-eQTL 1.36e-01 -0.11 0.0736 0.783 CD8_TEM L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 9.71e-01 -0.00398 0.11 0.783 CD8_TEM L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 6.72e-01 -0.043 0.101 0.783 CD8_TEM L2
ENSG00000133639 BTG1 -232934 sc-eQTL 8.13e-01 0.0157 0.066 0.784 MAIT L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 7.30e-01 -0.0344 0.0996 0.784 MAIT L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 4.34e-01 -0.0754 0.0962 0.784 MAIT L2
ENSG00000133639 BTG1 -232934 sc-eQTL 9.52e-01 0.00418 0.0698 0.782 NK_CD56bright L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 4.70e-01 0.0712 0.0985 0.782 NK_CD56bright L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 2.92e-01 0.107 0.101 0.782 NK_CD56bright L2
ENSG00000133639 BTG1 -232934 sc-eQTL 9.36e-01 0.00424 0.0528 0.787 NK_CD56dim L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 9.62e-01 0.00423 0.0886 0.787 NK_CD56dim L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 7.45e-02 0.147 0.0819 0.787 NK_CD56dim L2
ENSG00000133639 BTG1 -232934 sc-eQTL 5.41e-01 -0.0436 0.0711 0.79 NK_HLA L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 2.46e-01 0.127 0.109 0.79 NK_HLA L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 6.15e-01 -0.0487 0.0966 0.79 NK_HLA L2
ENSG00000133639 BTG1 -232934 sc-eQTL 2.84e-01 -0.0588 0.0548 0.787 NK_cytokine L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 6.57e-01 -0.0364 0.0818 0.787 NK_cytokine L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 8.30e-01 0.0178 0.083 0.787 NK_cytokine L2
ENSG00000133639 BTG1 -232934 sc-eQTL 8.10e-01 -0.0155 0.0643 0.796 PB L2
ENSG00000187510 C12orf74 -789931 sc-eQTL 1.25e-01 -0.199 0.129 0.796 PB L2
ENSG00000205056 LINC02397 -553539 sc-eQTL 5.46e-01 -0.0606 0.1 0.796 PB L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 7.76e-01 -0.0317 0.111 0.796 PB L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 6.67e-01 0.0522 0.121 0.796 PB L2
ENSG00000277851 LINC02391 -450920 sc-eQTL 2.45e-01 -0.143 0.122 0.796 PB L2
ENSG00000133639 BTG1 -232934 sc-eQTL 7.87e-01 -0.0119 0.0442 0.787 Pro_T L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 6.10e-01 -0.0505 0.0988 0.787 Pro_T L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 4.61e-01 0.0677 0.0917 0.787 Pro_T L2
ENSG00000133639 BTG1 -232934 sc-eQTL 1.86e-01 0.102 0.0769 0.786 Treg L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 5.23e-01 0.0618 0.0966 0.786 Treg L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 3.50e-01 -0.0996 0.106 0.786 Treg L2
ENSG00000133639 BTG1 -232934 sc-eQTL 3.20e-01 0.0842 0.0845 0.788 cDC L2
ENSG00000205056 LINC02397 -553539 sc-eQTL 2.66e-01 0.0745 0.0668 0.788 cDC L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 1.81e-01 0.146 0.109 0.788 cDC L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 3.72e-01 -0.0908 0.101 0.788 cDC L2
ENSG00000277851 LINC02391 -450920 sc-eQTL 7.79e-01 -0.0277 0.0985 0.788 cDC L2
ENSG00000133639 BTG1 -232934 sc-eQTL 8.58e-01 0.00904 0.0505 0.786 cMono_IL1B L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 8.14e-01 -0.0187 0.0794 0.786 cMono_IL1B L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 2.25e-01 0.118 0.0969 0.786 cMono_IL1B L2
ENSG00000133639 BTG1 -232934 sc-eQTL 4.71e-01 0.042 0.0582 0.786 cMono_S100A L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 2.83e-01 -0.0904 0.0839 0.786 cMono_S100A L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 6.00e-01 0.0533 0.101 0.786 cMono_S100A L2
ENSG00000133639 BTG1 -232934 sc-eQTL 4.08e-01 -0.0578 0.0697 0.776 gdT L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 2.44e-01 0.131 0.112 0.776 gdT L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 2.64e-01 0.132 0.118 0.776 gdT L2
ENSG00000133639 BTG1 -232934 sc-eQTL 6.10e-01 0.031 0.0608 0.782 intMono L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 8.06e-01 -0.0237 0.0964 0.782 intMono L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 2.27e-01 -0.121 0.0997 0.782 intMono L2
ENSG00000133639 BTG1 -232934 sc-eQTL 8.07e-01 0.0139 0.0568 0.785 ncMono L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 5.94e-01 -0.0481 0.0902 0.785 ncMono L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 8.35e-01 -0.0198 0.0951 0.785 ncMono L2
ENSG00000133639 BTG1 -232934 sc-eQTL 3.21e-01 -0.118 0.119 0.791 pDC L2
ENSG00000205056 LINC02397 -553539 sc-eQTL 3.25e-01 0.108 0.109 0.791 pDC L2
ENSG00000245904 AC025164.1 -232661 sc-eQTL 2.95e-01 -0.117 0.111 0.791 pDC L2
ENSG00000257242 LINC01619 -230002 sc-eQTL 4.28e-02 0.21 0.103 0.791 pDC L2
ENSG00000277851 LINC02391 -450920 sc-eQTL 4.70e-01 0.0643 0.0887 0.791 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -232934 sc-eQTL 6.59e-01 -0.0217 0.049 0.786 B_Memory LOneK1K
ENSG00000187510 C12orf74 -789931 sc-eQTL 2.56e-02 0.174 0.0773 0.786 B_Memory LOneK1K
ENSG00000205056 LINC02397 -553539 sc-eQTL 7.31e-02 0.123 0.0682 0.786 B_Memory LOneK1K
ENSG00000245904 AC025164.1 -232661 sc-eQTL 4.47e-01 -0.0543 0.0713 0.786 B_Memory LOneK1K
ENSG00000257242 LINC01619 -230002 sc-eQTL 9.57e-01 -0.0037 0.0684 0.786 B_Memory LOneK1K
ENSG00000277851 LINC02391 -450920 sc-eQTL 8.46e-01 0.0202 0.104 0.786 B_Memory LOneK1K
ENSG00000133639 BTG1 -232934 sc-eQTL 8.11e-01 -0.0111 0.0464 0.786 B_Naive LOneK1K
ENSG00000187510 C12orf74 -789931 sc-eQTL 1.38e-01 0.143 0.0958 0.786 B_Naive LOneK1K
ENSG00000205056 LINC02397 -553539 sc-eQTL 9.57e-02 0.0763 0.0456 0.786 B_Naive LOneK1K
ENSG00000245904 AC025164.1 -232661 sc-eQTL 4.02e-01 -0.0587 0.0699 0.786 B_Naive LOneK1K
ENSG00000257242 LINC01619 -230002 sc-eQTL 7.06e-02 0.123 0.0676 0.786 B_Naive LOneK1K
ENSG00000277851 LINC02391 -450920 sc-eQTL 5.27e-01 -0.0585 0.0923 0.786 B_Naive LOneK1K
ENSG00000133639 BTG1 -232934 sc-eQTL 6.41e-01 0.0223 0.0478 0.786 CD14_Mono LOneK1K
ENSG00000245904 AC025164.1 -232661 sc-eQTL 5.43e-01 -0.0461 0.0756 0.786 CD14_Mono LOneK1K
ENSG00000257242 LINC01619 -230002 sc-eQTL 1.46e-01 0.137 0.0937 0.786 CD14_Mono LOneK1K
ENSG00000133639 BTG1 -232934 sc-eQTL 7.93e-01 0.0127 0.0484 0.784 CD16_Mono LOneK1K
ENSG00000245904 AC025164.1 -232661 sc-eQTL 3.13e-01 -0.0848 0.0837 0.784 CD16_Mono LOneK1K
ENSG00000257242 LINC01619 -230002 sc-eQTL 3.90e-01 -0.0855 0.0992 0.784 CD16_Mono LOneK1K
ENSG00000133639 BTG1 -232934 sc-eQTL 7.26e-01 -0.0175 0.0496 0.787 NK_CD56dim LOneK1K
ENSG00000245904 AC025164.1 -232661 sc-eQTL 6.71e-01 -0.0314 0.0739 0.787 NK_CD56dim LOneK1K
ENSG00000257242 LINC01619 -230002 sc-eQTL 3.88e-01 0.0627 0.0726 0.787 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000205056 LINC02397 -553539 eQTL 0.00419 -0.054 0.0188 0.0 0.0 0.257

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina