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Genes within 1Mb (chr12:91833040:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -312806 sc-eQTL 3.77e-01 0.034 0.0384 0.472 B L1
ENSG00000187510 C12orf74 -869803 sc-eQTL 5.20e-01 -0.0343 0.0533 0.472 B L1
ENSG00000205056 LINC02397 -633411 sc-eQTL 9.68e-01 -0.00148 0.0364 0.472 B L1
ENSG00000245904 AC025164.1 -312533 sc-eQTL 9.20e-01 0.00527 0.0523 0.472 B L1
ENSG00000257242 LINC01619 -309874 sc-eQTL 5.55e-01 0.0292 0.0494 0.472 B L1
ENSG00000277851 LINC02391 -530792 sc-eQTL 2.18e-01 -0.0887 0.0718 0.472 B L1
ENSG00000133639 BTG1 -312806 sc-eQTL 8.08e-01 0.0117 0.0484 0.472 CD4T L1
ENSG00000245904 AC025164.1 -312533 sc-eQTL 7.90e-01 -0.0176 0.0662 0.472 CD4T L1
ENSG00000257242 LINC01619 -309874 sc-eQTL 7.10e-01 0.023 0.0617 0.472 CD4T L1
ENSG00000133639 BTG1 -312806 sc-eQTL 2.20e-01 0.058 0.0472 0.472 CD8T L1
ENSG00000245904 AC025164.1 -312533 sc-eQTL 7.02e-01 -0.0236 0.0616 0.472 CD8T L1
ENSG00000257242 LINC01619 -309874 sc-eQTL 9.41e-01 0.00475 0.0636 0.472 CD8T L1
ENSG00000133639 BTG1 -312806 sc-eQTL 6.28e-01 0.0376 0.0773 0.459 DC L1
ENSG00000205056 LINC02397 -633411 sc-eQTL 6.19e-01 0.0367 0.0738 0.459 DC L1
ENSG00000245904 AC025164.1 -312533 sc-eQTL 3.96e-01 -0.0713 0.0838 0.459 DC L1
ENSG00000257242 LINC01619 -309874 sc-eQTL 9.47e-01 -0.00533 0.0804 0.459 DC L1
ENSG00000277851 LINC02391 -530792 sc-eQTL 6.49e-01 0.0346 0.076 0.459 DC L1
ENSG00000133639 BTG1 -312806 sc-eQTL 3.79e-01 0.032 0.0363 0.472 Mono L1
ENSG00000245904 AC025164.1 -312533 sc-eQTL 6.48e-01 -0.0271 0.0592 0.472 Mono L1
ENSG00000257242 LINC01619 -309874 sc-eQTL 6.99e-01 -0.0281 0.0727 0.472 Mono L1
ENSG00000133639 BTG1 -312806 sc-eQTL 1.84e-01 0.0579 0.0434 0.472 NK L1
ENSG00000245904 AC025164.1 -312533 sc-eQTL 8.56e-01 0.011 0.0606 0.472 NK L1
ENSG00000257242 LINC01619 -309874 sc-eQTL 1.01e-01 0.0985 0.0599 0.472 NK L1
ENSG00000133639 BTG1 -312806 sc-eQTL 8.49e-01 0.00686 0.036 0.472 Other_T L1
ENSG00000245904 AC025164.1 -312533 sc-eQTL 4.38e-01 0.0591 0.0761 0.472 Other_T L1
ENSG00000257242 LINC01619 -309874 sc-eQTL 1.30e-03 0.228 0.0699 0.472 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -312806 sc-eQTL 3.63e-01 0.0426 0.0467 0.469 B_Activated L2
ENSG00000187510 C12orf74 -869803 sc-eQTL 3.95e-01 -0.0703 0.0824 0.469 B_Activated L2
ENSG00000205056 LINC02397 -633411 sc-eQTL 9.76e-01 -0.00255 0.0859 0.469 B_Activated L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 3.55e-01 -0.0843 0.091 0.469 B_Activated L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 6.82e-01 0.0291 0.0709 0.469 B_Activated L2
ENSG00000277851 LINC02391 -530792 sc-eQTL 5.26e-01 0.0485 0.0762 0.469 B_Activated L2
ENSG00000133639 BTG1 -312806 sc-eQTL 9.63e-01 0.00215 0.0465 0.47 B_Intermediate L2
ENSG00000187510 C12orf74 -869803 sc-eQTL 9.58e-01 0.00427 0.0805 0.47 B_Intermediate L2
ENSG00000205056 LINC02397 -633411 sc-eQTL 1.10e-01 -0.0949 0.0592 0.47 B_Intermediate L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 6.80e-01 0.027 0.0653 0.47 B_Intermediate L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 1.11e-01 0.102 0.0637 0.47 B_Intermediate L2
ENSG00000277851 LINC02391 -530792 sc-eQTL 5.39e-01 0.0516 0.0838 0.47 B_Intermediate L2
ENSG00000133639 BTG1 -312806 sc-eQTL 7.29e-01 0.015 0.0434 0.472 B_Memory L2
ENSG00000187510 C12orf74 -869803 sc-eQTL 4.40e-01 -0.0583 0.0754 0.472 B_Memory L2
ENSG00000205056 LINC02397 -633411 sc-eQTL 7.66e-01 -0.0218 0.0733 0.472 B_Memory L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 6.68e-01 0.0331 0.077 0.472 B_Memory L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 5.35e-01 0.0428 0.0689 0.472 B_Memory L2
ENSG00000277851 LINC02391 -530792 sc-eQTL 5.47e-01 -0.0499 0.0826 0.472 B_Memory L2
ENSG00000133639 BTG1 -312806 sc-eQTL 7.34e-01 0.0149 0.0438 0.472 B_Naive1 L2
ENSG00000187510 C12orf74 -869803 sc-eQTL 2.13e-01 0.0965 0.0772 0.472 B_Naive1 L2
ENSG00000205056 LINC02397 -633411 sc-eQTL 6.24e-01 0.0232 0.0471 0.472 B_Naive1 L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 3.11e-01 0.0643 0.0633 0.472 B_Naive1 L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 8.61e-01 -0.011 0.0629 0.472 B_Naive1 L2
ENSG00000277851 LINC02391 -530792 sc-eQTL 9.40e-01 -0.00583 0.0773 0.472 B_Naive1 L2
ENSG00000133639 BTG1 -312806 sc-eQTL 6.70e-02 -0.0769 0.0418 0.474 B_Naive2 L2
ENSG00000187510 C12orf74 -869803 sc-eQTL 8.09e-01 -0.0148 0.0612 0.474 B_Naive2 L2
ENSG00000205056 LINC02397 -633411 sc-eQTL 7.69e-01 -0.0129 0.0439 0.474 B_Naive2 L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 1.04e-03 -0.224 0.0675 0.474 B_Naive2 L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 1.08e-01 -0.106 0.0659 0.474 B_Naive2 L2
ENSG00000277851 LINC02391 -530792 sc-eQTL 2.96e-01 -0.0857 0.0818 0.474 B_Naive2 L2
ENSG00000133639 BTG1 -312806 sc-eQTL 6.72e-02 -0.109 0.0593 0.468 CD4_CTL L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 1.15e-01 -0.148 0.0933 0.468 CD4_CTL L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 6.13e-01 -0.043 0.0848 0.468 CD4_CTL L2
ENSG00000133639 BTG1 -312806 sc-eQTL 3.35e-01 0.0471 0.0487 0.472 CD4_Naive L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 6.23e-01 -0.0326 0.0661 0.472 CD4_Naive L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 4.62e-01 0.0468 0.0635 0.472 CD4_Naive L2
ENSG00000133639 BTG1 -312806 sc-eQTL 9.26e-01 -0.00435 0.0471 0.472 CD4_TCM L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 6.77e-01 -0.0294 0.0706 0.472 CD4_TCM L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 6.20e-01 0.0302 0.0608 0.472 CD4_TCM L2
ENSG00000133639 BTG1 -312806 sc-eQTL 4.05e-01 -0.0481 0.0576 0.472 CD4_TEM L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 8.42e-01 -0.0169 0.0847 0.472 CD4_TEM L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 1.25e-01 0.125 0.0809 0.472 CD4_TEM L2
ENSG00000133639 BTG1 -312806 sc-eQTL 7.65e-01 -0.014 0.0469 0.472 CD8_CTL L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 1.94e-01 -0.0999 0.0767 0.472 CD8_CTL L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 3.74e-01 0.0618 0.0694 0.472 CD8_CTL L2
ENSG00000133639 BTG1 -312806 sc-eQTL 6.13e-01 0.0309 0.061 0.472 CD8_Naive L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 3.88e-01 -0.0653 0.0755 0.472 CD8_Naive L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 6.70e-01 -0.0329 0.0769 0.472 CD8_Naive L2
ENSG00000133639 BTG1 -312806 sc-eQTL 6.93e-01 -0.0253 0.064 0.484 CD8_TCM L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 1.43e-01 -0.129 0.0877 0.484 CD8_TCM L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 3.04e-01 0.0906 0.0879 0.484 CD8_TCM L2
ENSG00000133639 BTG1 -312806 sc-eQTL 4.89e-01 -0.043 0.062 0.461 CD8_TEM L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 3.49e-01 -0.0861 0.0918 0.461 CD8_TEM L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 4.24e-01 0.068 0.0849 0.461 CD8_TEM L2
ENSG00000133639 BTG1 -312806 sc-eQTL 5.01e-01 0.0372 0.0552 0.472 MAIT L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 5.71e-01 -0.0472 0.0833 0.472 MAIT L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 1.49e-03 0.253 0.0786 0.472 MAIT L2
ENSG00000133639 BTG1 -312806 sc-eQTL 3.67e-01 0.051 0.0563 0.476 NK_CD56bright L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 2.65e-02 0.176 0.0788 0.476 NK_CD56bright L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 5.37e-01 0.0509 0.0822 0.476 NK_CD56bright L2
ENSG00000133639 BTG1 -312806 sc-eQTL 8.25e-01 0.00979 0.0442 0.472 NK_CD56dim L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 1.95e-01 -0.0962 0.074 0.472 NK_CD56dim L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 9.58e-02 0.115 0.0687 0.472 NK_CD56dim L2
ENSG00000133639 BTG1 -312806 sc-eQTL 9.22e-01 0.00562 0.0574 0.479 NK_HLA L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 9.45e-01 -0.00612 0.0883 0.479 NK_HLA L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 7.48e-01 -0.025 0.078 0.479 NK_HLA L2
ENSG00000133639 BTG1 -312806 sc-eQTL 4.48e-01 0.0351 0.0461 0.472 NK_cytokine L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 9.80e-01 0.0017 0.0688 0.472 NK_cytokine L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 9.71e-01 -0.00254 0.0698 0.472 NK_cytokine L2
ENSG00000133639 BTG1 -312806 sc-eQTL 5.11e-01 0.0352 0.0533 0.459 PB L2
ENSG00000187510 C12orf74 -869803 sc-eQTL 4.04e-01 -0.0901 0.108 0.459 PB L2
ENSG00000205056 LINC02397 -633411 sc-eQTL 8.60e-01 0.0148 0.0834 0.459 PB L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 8.33e-01 0.0195 0.0925 0.459 PB L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 4.05e-01 0.084 0.101 0.459 PB L2
ENSG00000277851 LINC02391 -530792 sc-eQTL 6.81e-01 0.042 0.102 0.459 PB L2
ENSG00000133639 BTG1 -312806 sc-eQTL 8.74e-01 -0.00583 0.0366 0.467 Pro_T L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 6.32e-01 -0.0393 0.082 0.467 Pro_T L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 4.88e-01 0.0528 0.076 0.467 Pro_T L2
ENSG00000133639 BTG1 -312806 sc-eQTL 3.12e-01 -0.0644 0.0635 0.472 Treg L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 8.42e-01 -0.0159 0.0797 0.472 Treg L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 4.25e-02 -0.178 0.087 0.472 Treg L2
ENSG00000133639 BTG1 -312806 sc-eQTL 6.29e-01 0.033 0.0682 0.461 cDC L2
ENSG00000205056 LINC02397 -633411 sc-eQTL 6.48e-01 0.0247 0.054 0.461 cDC L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 9.26e-01 0.00815 0.0879 0.461 cDC L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 9.29e-01 -0.00734 0.0818 0.461 cDC L2
ENSG00000277851 LINC02391 -530792 sc-eQTL 9.44e-01 0.00561 0.0793 0.461 cDC L2
ENSG00000133639 BTG1 -312806 sc-eQTL 5.35e-01 -0.0253 0.0407 0.472 cMono_IL1B L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 3.77e-01 -0.0567 0.0639 0.472 cMono_IL1B L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 8.49e-01 -0.0149 0.0784 0.472 cMono_IL1B L2
ENSG00000133639 BTG1 -312806 sc-eQTL 3.38e-01 0.0451 0.047 0.472 cMono_S100A L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 7.95e-01 -0.0177 0.068 0.472 cMono_S100A L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 4.47e-01 -0.0624 0.0819 0.472 cMono_S100A L2
ENSG00000133639 BTG1 -312806 sc-eQTL 7.00e-01 -0.0228 0.0591 0.479 gdT L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 4.96e-01 0.0649 0.0951 0.479 gdT L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 4.80e-01 0.071 0.1 0.479 gdT L2
ENSG00000133639 BTG1 -312806 sc-eQTL 2.30e-02 0.108 0.0472 0.476 intMono L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 3.52e-01 0.0706 0.0757 0.476 intMono L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 1.62e-01 -0.11 0.0783 0.476 intMono L2
ENSG00000133639 BTG1 -312806 sc-eQTL 5.46e-01 -0.0283 0.0468 0.471 ncMono L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 6.57e-01 -0.0331 0.0744 0.471 ncMono L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 7.02e-01 -0.03 0.0784 0.471 ncMono L2
ENSG00000133639 BTG1 -312806 sc-eQTL 5.96e-01 -0.0497 0.0934 0.452 pDC L2
ENSG00000205056 LINC02397 -633411 sc-eQTL 6.01e-01 -0.0451 0.0861 0.452 pDC L2
ENSG00000245904 AC025164.1 -312533 sc-eQTL 1.71e-01 -0.12 0.087 0.452 pDC L2
ENSG00000257242 LINC01619 -309874 sc-eQTL 7.57e-01 0.0254 0.0818 0.452 pDC L2
ENSG00000277851 LINC02391 -530792 sc-eQTL 1.42e-01 0.102 0.0693 0.452 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -312806 sc-eQTL 7.04e-01 0.0156 0.0412 0.472 B_Memory LOneK1K
ENSG00000187510 C12orf74 -869803 sc-eQTL 3.17e-01 -0.0658 0.0655 0.472 B_Memory LOneK1K
ENSG00000205056 LINC02397 -633411 sc-eQTL 1.28e-01 -0.0877 0.0575 0.472 B_Memory LOneK1K
ENSG00000245904 AC025164.1 -312533 sc-eQTL 6.28e-01 -0.0291 0.06 0.472 B_Memory LOneK1K
ENSG00000257242 LINC01619 -309874 sc-eQTL 1.92e-01 0.0749 0.0572 0.472 B_Memory LOneK1K
ENSG00000277851 LINC02391 -530792 sc-eQTL 7.30e-01 0.0302 0.0874 0.472 B_Memory LOneK1K
ENSG00000133639 BTG1 -312806 sc-eQTL 8.73e-01 -0.00613 0.0384 0.472 B_Naive LOneK1K
ENSG00000187510 C12orf74 -869803 sc-eQTL 2.58e-01 0.0901 0.0795 0.472 B_Naive LOneK1K
ENSG00000205056 LINC02397 -633411 sc-eQTL 7.12e-01 0.014 0.038 0.472 B_Naive LOneK1K
ENSG00000245904 AC025164.1 -312533 sc-eQTL 4.75e-01 -0.0415 0.0579 0.472 B_Naive LOneK1K
ENSG00000257242 LINC01619 -309874 sc-eQTL 4.95e-01 -0.0385 0.0563 0.472 B_Naive LOneK1K
ENSG00000277851 LINC02391 -530792 sc-eQTL 4.12e-01 -0.0628 0.0764 0.472 B_Naive LOneK1K
ENSG00000133639 BTG1 -312806 sc-eQTL 9.48e-01 0.00255 0.0389 0.472 CD14_Mono LOneK1K
ENSG00000245904 AC025164.1 -312533 sc-eQTL 5.55e-01 -0.0363 0.0614 0.472 CD14_Mono LOneK1K
ENSG00000257242 LINC01619 -309874 sc-eQTL 6.50e-01 -0.0347 0.0764 0.472 CD14_Mono LOneK1K
ENSG00000133639 BTG1 -312806 sc-eQTL 7.17e-01 0.0143 0.0394 0.47 CD16_Mono LOneK1K
ENSG00000245904 AC025164.1 -312533 sc-eQTL 3.57e-01 0.063 0.0682 0.47 CD16_Mono LOneK1K
ENSG00000257242 LINC01619 -309874 sc-eQTL 2.80e-01 -0.0875 0.0807 0.47 CD16_Mono LOneK1K
ENSG00000133639 BTG1 -312806 sc-eQTL 2.12e-01 0.0518 0.0413 0.472 NK_CD56dim LOneK1K
ENSG00000245904 AC025164.1 -312533 sc-eQTL 5.04e-01 -0.0413 0.0617 0.472 NK_CD56dim LOneK1K
ENSG00000257242 LINC01619 -309874 sc-eQTL 3.14e-01 0.0611 0.0606 0.472 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000205056 \N -633411 2.76e-07 1.27e-07 5.03e-08 2.07e-07 9.24e-08 8.45e-08 1.67e-07 5.48e-08 1.45e-07 6.08e-08 1.57e-07 1.01e-07 1.53e-07 7.95e-08 5.97e-08 7.36e-08 3.98e-08 1.27e-07 7.12e-08 5.04e-08 1.22e-07 1.26e-07 1.45e-07 3.03e-08 1.72e-07 1.25e-07 1.17e-07 1.12e-07 1.2e-07 1.07e-07 1.02e-07 2.96e-08 3.46e-08 8.23e-08 3.4e-08 3.6e-08 5.37e-08 8.93e-08 6.71e-08 3.82e-08 4.92e-08 1.46e-07 5.2e-08 1.09e-08 3.42e-08 1.65e-08 8.74e-08 1.91e-09 4.88e-08