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Genes within 1Mb (chr12:91821223:T:TG):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -324623 sc-eQTL 8.23e-01 0.00933 0.0415 0.707 B L1
ENSG00000187510 C12orf74 -881620 sc-eQTL 5.32e-01 -0.036 0.0575 0.707 B L1
ENSG00000205056 LINC02397 -645228 sc-eQTL 3.78e-01 0.0346 0.0392 0.707 B L1
ENSG00000245904 AC025164.1 -324350 sc-eQTL 5.21e-01 0.0363 0.0564 0.707 B L1
ENSG00000257242 LINC01619 -321691 sc-eQTL 9.60e-01 0.00266 0.0533 0.707 B L1
ENSG00000277851 LINC02391 -542609 sc-eQTL 1.18e-01 -0.121 0.0773 0.707 B L1
ENSG00000133639 BTG1 -324623 sc-eQTL 2.30e-01 0.063 0.0524 0.707 CD4T L1
ENSG00000245904 AC025164.1 -324350 sc-eQTL 9.56e-01 0.00395 0.0719 0.707 CD4T L1
ENSG00000257242 LINC01619 -321691 sc-eQTL 6.55e-01 0.03 0.0671 0.707 CD4T L1
ENSG00000133639 BTG1 -324623 sc-eQTL 4.02e-01 0.0438 0.0522 0.707 CD8T L1
ENSG00000245904 AC025164.1 -324350 sc-eQTL 3.48e-01 -0.0639 0.0679 0.707 CD8T L1
ENSG00000257242 LINC01619 -321691 sc-eQTL 7.62e-01 0.0213 0.0702 0.707 CD8T L1
ENSG00000133639 BTG1 -324623 sc-eQTL 3.77e-01 -0.076 0.0858 0.698 DC L1
ENSG00000205056 LINC02397 -645228 sc-eQTL 9.60e-02 0.136 0.0814 0.698 DC L1
ENSG00000245904 AC025164.1 -324350 sc-eQTL 6.92e-01 0.0369 0.0932 0.698 DC L1
ENSG00000257242 LINC01619 -321691 sc-eQTL 4.66e-02 0.177 0.0884 0.698 DC L1
ENSG00000277851 LINC02391 -542609 sc-eQTL 2.32e-01 0.101 0.0841 0.698 DC L1
ENSG00000133639 BTG1 -324623 sc-eQTL 7.85e-01 0.0109 0.04 0.707 Mono L1
ENSG00000245904 AC025164.1 -324350 sc-eQTL 7.44e-01 -0.0213 0.0652 0.707 Mono L1
ENSG00000257242 LINC01619 -321691 sc-eQTL 3.68e-01 -0.0722 0.08 0.707 Mono L1
ENSG00000133639 BTG1 -324623 sc-eQTL 7.43e-01 0.0157 0.048 0.706 NK L1
ENSG00000245904 AC025164.1 -324350 sc-eQTL 1.59e-02 -0.16 0.0658 0.706 NK L1
ENSG00000257242 LINC01619 -321691 sc-eQTL 5.14e-02 0.129 0.0657 0.706 NK L1
ENSG00000133639 BTG1 -324623 sc-eQTL 5.19e-01 -0.0255 0.0395 0.707 Other_T L1
ENSG00000245904 AC025164.1 -324350 sc-eQTL 3.91e-01 0.0718 0.0836 0.707 Other_T L1
ENSG00000257242 LINC01619 -321691 sc-eQTL 3.69e-01 0.0708 0.0786 0.707 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -324623 sc-eQTL 4.14e-01 0.0426 0.052 0.709 B_Activated L2
ENSG00000187510 C12orf74 -881620 sc-eQTL 1.97e-01 -0.119 0.0915 0.709 B_Activated L2
ENSG00000205056 LINC02397 -645228 sc-eQTL 4.99e-01 -0.0647 0.0956 0.709 B_Activated L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 3.02e-01 0.105 0.101 0.709 B_Activated L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 8.67e-01 -0.0133 0.079 0.709 B_Activated L2
ENSG00000277851 LINC02391 -542609 sc-eQTL 4.26e-01 -0.0677 0.0848 0.709 B_Activated L2
ENSG00000133639 BTG1 -324623 sc-eQTL 8.84e-01 0.0075 0.0512 0.706 B_Intermediate L2
ENSG00000187510 C12orf74 -881620 sc-eQTL 6.29e-01 0.0429 0.0886 0.706 B_Intermediate L2
ENSG00000205056 LINC02397 -645228 sc-eQTL 3.27e-01 -0.0643 0.0654 0.706 B_Intermediate L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 9.03e-01 0.00873 0.0719 0.706 B_Intermediate L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 5.45e-01 0.0427 0.0705 0.706 B_Intermediate L2
ENSG00000277851 LINC02391 -542609 sc-eQTL 6.10e-01 -0.0471 0.0923 0.706 B_Intermediate L2
ENSG00000133639 BTG1 -324623 sc-eQTL 5.33e-01 -0.029 0.0465 0.707 B_Memory L2
ENSG00000187510 C12orf74 -881620 sc-eQTL 1.13e-01 -0.128 0.0806 0.707 B_Memory L2
ENSG00000205056 LINC02397 -645228 sc-eQTL 1.64e-01 0.109 0.0783 0.707 B_Memory L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 3.54e-01 0.0766 0.0825 0.707 B_Memory L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 4.00e-01 0.0623 0.0739 0.707 B_Memory L2
ENSG00000277851 LINC02391 -542609 sc-eQTL 9.71e-01 -0.00323 0.0888 0.707 B_Memory L2
ENSG00000133639 BTG1 -324623 sc-eQTL 8.92e-01 0.00643 0.0474 0.707 B_Naive1 L2
ENSG00000187510 C12orf74 -881620 sc-eQTL 2.49e-01 0.0964 0.0834 0.707 B_Naive1 L2
ENSG00000205056 LINC02397 -645228 sc-eQTL 2.66e-01 0.0566 0.0508 0.707 B_Naive1 L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 3.61e-01 0.0625 0.0684 0.707 B_Naive1 L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 6.24e-01 -0.0333 0.0679 0.707 B_Naive1 L2
ENSG00000277851 LINC02391 -542609 sc-eQTL 5.36e-01 -0.0517 0.0835 0.707 B_Naive1 L2
ENSG00000133639 BTG1 -324623 sc-eQTL 5.83e-01 -0.0259 0.047 0.708 B_Naive2 L2
ENSG00000187510 C12orf74 -881620 sc-eQTL 2.53e-01 0.0781 0.0682 0.708 B_Naive2 L2
ENSG00000205056 LINC02397 -645228 sc-eQTL 6.57e-01 0.0218 0.0491 0.708 B_Naive2 L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 5.27e-01 -0.049 0.0773 0.708 B_Naive2 L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 7.06e-01 -0.028 0.0741 0.708 B_Naive2 L2
ENSG00000277851 LINC02391 -542609 sc-eQTL 3.49e-01 -0.0858 0.0915 0.708 B_Naive2 L2
ENSG00000133639 BTG1 -324623 sc-eQTL 3.46e-01 -0.059 0.0624 0.707 CD4_CTL L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 4.36e-03 -0.277 0.0962 0.707 CD4_CTL L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 2.76e-01 -0.0966 0.0885 0.707 CD4_CTL L2
ENSG00000133639 BTG1 -324623 sc-eQTL 1.19e-01 0.0828 0.0529 0.707 CD4_Naive L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 3.23e-01 0.0712 0.0718 0.707 CD4_Naive L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 6.52e-01 0.0313 0.0691 0.707 CD4_Naive L2
ENSG00000133639 BTG1 -324623 sc-eQTL 5.59e-01 0.0298 0.0509 0.707 CD4_TCM L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 9.90e-01 0.000968 0.0764 0.707 CD4_TCM L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 3.24e-01 0.0649 0.0657 0.707 CD4_TCM L2
ENSG00000133639 BTG1 -324623 sc-eQTL 6.65e-01 0.0271 0.0626 0.707 CD4_TEM L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 5.48e-01 -0.0553 0.0919 0.707 CD4_TEM L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 1.83e-01 0.117 0.0879 0.707 CD4_TEM L2
ENSG00000133639 BTG1 -324623 sc-eQTL 3.19e-01 -0.0512 0.0513 0.707 CD8_CTL L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 5.52e-02 -0.161 0.0836 0.707 CD8_CTL L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 7.26e-01 -0.0267 0.0762 0.707 CD8_CTL L2
ENSG00000133639 BTG1 -324623 sc-eQTL 6.35e-01 0.0311 0.0654 0.707 CD8_Naive L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 3.63e-01 -0.0738 0.081 0.707 CD8_Naive L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 3.14e-01 0.083 0.0823 0.707 CD8_Naive L2
ENSG00000133639 BTG1 -324623 sc-eQTL 6.66e-01 0.0311 0.072 0.715 CD8_TCM L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 2.22e-01 0.121 0.0989 0.715 CD8_TCM L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 8.46e-01 -0.0193 0.0991 0.715 CD8_TCM L2
ENSG00000133639 BTG1 -324623 sc-eQTL 7.19e-01 0.0243 0.0676 0.705 CD8_TEM L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 2.89e-01 -0.106 0.1 0.705 CD8_TEM L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 7.09e-01 -0.0346 0.0926 0.705 CD8_TEM L2
ENSG00000133639 BTG1 -324623 sc-eQTL 7.85e-01 0.0164 0.0603 0.708 MAIT L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 7.84e-01 0.025 0.091 0.708 MAIT L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 4.48e-01 0.0668 0.0878 0.708 MAIT L2
ENSG00000133639 BTG1 -324623 sc-eQTL 3.83e-01 -0.0557 0.0638 0.716 NK_CD56bright L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 6.59e-01 -0.0399 0.0902 0.716 NK_CD56bright L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 2.19e-01 0.114 0.0927 0.716 NK_CD56bright L2
ENSG00000133639 BTG1 -324623 sc-eQTL 9.06e-01 0.00579 0.049 0.707 NK_CD56dim L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 2.88e-03 -0.243 0.0806 0.707 NK_CD56dim L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 1.06e-01 0.124 0.0762 0.707 NK_CD56dim L2
ENSG00000133639 BTG1 -324623 sc-eQTL 7.69e-01 0.0188 0.0639 0.708 NK_HLA L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 2.90e-01 -0.104 0.0981 0.708 NK_HLA L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 8.80e-01 -0.0132 0.0869 0.708 NK_HLA L2
ENSG00000133639 BTG1 -324623 sc-eQTL 7.88e-01 0.0137 0.0507 0.707 NK_cytokine L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 2.54e-01 -0.0861 0.0753 0.707 NK_cytokine L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 9.39e-01 0.00583 0.0766 0.707 NK_cytokine L2
ENSG00000133639 BTG1 -324623 sc-eQTL 6.27e-01 -0.0288 0.059 0.693 PB L2
ENSG00000187510 C12orf74 -881620 sc-eQTL 6.19e-01 -0.0594 0.119 0.693 PB L2
ENSG00000205056 LINC02397 -645228 sc-eQTL 6.69e-01 -0.0395 0.0921 0.693 PB L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 6.25e-01 -0.0501 0.102 0.693 PB L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 3.65e-01 0.101 0.111 0.693 PB L2
ENSG00000277851 LINC02391 -542609 sc-eQTL 9.42e-01 -0.00829 0.113 0.693 PB L2
ENSG00000133639 BTG1 -324623 sc-eQTL 3.82e-01 -0.0349 0.0398 0.707 Pro_T L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 9.33e-01 0.00746 0.0892 0.707 Pro_T L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 3.62e-01 -0.0755 0.0826 0.707 Pro_T L2
ENSG00000133639 BTG1 -324623 sc-eQTL 5.01e-01 0.047 0.0698 0.707 Treg L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 3.99e-01 -0.0739 0.0873 0.707 Treg L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 9.46e-01 -0.00654 0.0964 0.707 Treg L2
ENSG00000133639 BTG1 -324623 sc-eQTL 9.84e-01 -0.00153 0.0771 0.71 cDC L2
ENSG00000205056 LINC02397 -645228 sc-eQTL 9.15e-01 -0.00649 0.061 0.71 cDC L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 1.73e-01 0.135 0.0987 0.71 cDC L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 1.68e-01 0.127 0.092 0.71 cDC L2
ENSG00000277851 LINC02391 -542609 sc-eQTL 7.42e-01 0.0296 0.0896 0.71 cDC L2
ENSG00000133639 BTG1 -324623 sc-eQTL 3.05e-01 -0.0467 0.0454 0.707 cMono_IL1B L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 7.74e-01 -0.0206 0.0716 0.707 cMono_IL1B L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 4.92e-01 -0.0602 0.0875 0.707 cMono_IL1B L2
ENSG00000133639 BTG1 -324623 sc-eQTL 7.84e-01 -0.0144 0.0524 0.707 cMono_S100A L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 4.78e-01 -0.0538 0.0757 0.707 cMono_S100A L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 4.42e-01 -0.0703 0.0913 0.707 cMono_S100A L2
ENSG00000133639 BTG1 -324623 sc-eQTL 2.68e-01 -0.0704 0.0632 0.712 gdT L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 8.72e-01 0.0166 0.102 0.712 gdT L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 5.79e-01 -0.0599 0.108 0.712 gdT L2
ENSG00000133639 BTG1 -324623 sc-eQTL 6.07e-01 0.0278 0.054 0.709 intMono L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 6.11e-01 0.0436 0.0855 0.709 intMono L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 6.32e-01 -0.0425 0.0888 0.709 intMono L2
ENSG00000133639 BTG1 -324623 sc-eQTL 7.87e-01 -0.0138 0.051 0.706 ncMono L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 8.95e-01 0.0107 0.0811 0.706 ncMono L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 9.64e-01 -0.00391 0.0854 0.706 ncMono L2
ENSG00000133639 BTG1 -324623 sc-eQTL 4.50e-02 -0.201 0.0993 0.706 pDC L2
ENSG00000205056 LINC02397 -645228 sc-eQTL 1.91e-01 0.121 0.0923 0.706 pDC L2
ENSG00000245904 AC025164.1 -324350 sc-eQTL 2.86e-01 -0.101 0.0939 0.706 pDC L2
ENSG00000257242 LINC01619 -321691 sc-eQTL 7.19e-02 0.158 0.0872 0.706 pDC L2
ENSG00000277851 LINC02391 -542609 sc-eQTL 1.53e-01 0.107 0.0747 0.706 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -324623 sc-eQTL 5.66e-01 -0.0256 0.0445 0.707 B_Memory LOneK1K
ENSG00000187510 C12orf74 -881620 sc-eQTL 1.45e-01 -0.103 0.0707 0.707 B_Memory LOneK1K
ENSG00000205056 LINC02397 -645228 sc-eQTL 7.67e-01 -0.0185 0.0625 0.707 B_Memory LOneK1K
ENSG00000245904 AC025164.1 -324350 sc-eQTL 7.82e-01 0.018 0.0649 0.707 B_Memory LOneK1K
ENSG00000257242 LINC01619 -321691 sc-eQTL 4.71e-01 0.0448 0.0621 0.707 B_Memory LOneK1K
ENSG00000277851 LINC02391 -542609 sc-eQTL 7.25e-01 -0.0333 0.0945 0.707 B_Memory LOneK1K
ENSG00000133639 BTG1 -324623 sc-eQTL 8.79e-01 0.00642 0.0422 0.707 B_Naive LOneK1K
ENSG00000187510 C12orf74 -881620 sc-eQTL 9.11e-02 0.148 0.0869 0.707 B_Naive LOneK1K
ENSG00000205056 LINC02397 -645228 sc-eQTL 1.41e-01 0.0613 0.0415 0.707 B_Naive LOneK1K
ENSG00000245904 AC025164.1 -324350 sc-eQTL 8.62e-01 0.0111 0.0636 0.707 B_Naive LOneK1K
ENSG00000257242 LINC01619 -321691 sc-eQTL 3.45e-01 -0.0585 0.0618 0.707 B_Naive LOneK1K
ENSG00000277851 LINC02391 -542609 sc-eQTL 3.02e-01 -0.0867 0.0838 0.707 B_Naive LOneK1K
ENSG00000133639 BTG1 -324623 sc-eQTL 3.88e-01 -0.0374 0.0432 0.707 CD14_Mono LOneK1K
ENSG00000245904 AC025164.1 -324350 sc-eQTL 6.58e-01 -0.0303 0.0684 0.707 CD14_Mono LOneK1K
ENSG00000257242 LINC01619 -321691 sc-eQTL 3.41e-01 -0.0811 0.0849 0.707 CD14_Mono LOneK1K
ENSG00000133639 BTG1 -324623 sc-eQTL 7.08e-01 0.0163 0.0434 0.705 CD16_Mono LOneK1K
ENSG00000245904 AC025164.1 -324350 sc-eQTL 6.30e-01 0.0363 0.0753 0.705 CD16_Mono LOneK1K
ENSG00000257242 LINC01619 -321691 sc-eQTL 5.62e-01 -0.0518 0.0892 0.705 CD16_Mono LOneK1K
ENSG00000133639 BTG1 -324623 sc-eQTL 5.02e-01 0.0306 0.0456 0.707 NK_CD56dim LOneK1K
ENSG00000245904 AC025164.1 -324350 sc-eQTL 9.84e-03 -0.174 0.0668 0.707 NK_CD56dim LOneK1K
ENSG00000257242 LINC01619 -321691 sc-eQTL 3.71e-01 0.0597 0.0666 0.707 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000277851 LINC02391 -542609 eQTL 0.0174 -0.104 0.0438 0.0 0.0 0.301

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina