logo

Genes within 1Mb (chr12:91804086:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -341760 sc-eQTL 5.26e-01 0.024 0.0378 0.451 B L1
ENSG00000187510 C12orf74 -898757 sc-eQTL 3.73e-01 -0.0467 0.0523 0.451 B L1
ENSG00000205056 LINC02397 -662365 sc-eQTL 8.96e-01 -0.00466 0.0357 0.451 B L1
ENSG00000245904 AC025164.1 -341487 sc-eQTL 7.89e-01 -0.0138 0.0513 0.451 B L1
ENSG00000257242 LINC01619 -338828 sc-eQTL 7.88e-01 0.0131 0.0485 0.451 B L1
ENSG00000277851 LINC02391 -559746 sc-eQTL 3.92e-01 -0.0606 0.0706 0.451 B L1
ENSG00000133639 BTG1 -341760 sc-eQTL 7.91e-01 0.0126 0.0474 0.451 CD4T L1
ENSG00000245904 AC025164.1 -341487 sc-eQTL 6.23e-01 -0.0319 0.0648 0.451 CD4T L1
ENSG00000257242 LINC01619 -338828 sc-eQTL 9.01e-01 0.0075 0.0605 0.451 CD4T L1
ENSG00000133639 BTG1 -341760 sc-eQTL 2.74e-01 0.0508 0.0463 0.451 CD8T L1
ENSG00000245904 AC025164.1 -341487 sc-eQTL 6.53e-01 -0.0272 0.0604 0.451 CD8T L1
ENSG00000257242 LINC01619 -338828 sc-eQTL 9.01e-01 -0.00775 0.0624 0.451 CD8T L1
ENSG00000133639 BTG1 -341760 sc-eQTL 4.24e-01 0.0617 0.0769 0.437 DC L1
ENSG00000205056 LINC02397 -662365 sc-eQTL 9.13e-01 0.00804 0.0735 0.437 DC L1
ENSG00000245904 AC025164.1 -341487 sc-eQTL 3.83e-01 -0.0729 0.0833 0.437 DC L1
ENSG00000257242 LINC01619 -338828 sc-eQTL 8.35e-01 0.0167 0.08 0.437 DC L1
ENSG00000277851 LINC02391 -559746 sc-eQTL 8.51e-01 -0.0143 0.0756 0.437 DC L1
ENSG00000133639 BTG1 -341760 sc-eQTL 3.93e-01 0.0309 0.0361 0.451 Mono L1
ENSG00000245904 AC025164.1 -341487 sc-eQTL 3.88e-01 -0.0509 0.0588 0.451 Mono L1
ENSG00000257242 LINC01619 -338828 sc-eQTL 3.00e-01 -0.075 0.0722 0.451 Mono L1
ENSG00000133639 BTG1 -341760 sc-eQTL 1.76e-01 0.058 0.0428 0.451 NK L1
ENSG00000245904 AC025164.1 -341487 sc-eQTL 9.48e-01 0.00389 0.0596 0.451 NK L1
ENSG00000257242 LINC01619 -338828 sc-eQTL 1.14e-01 0.0936 0.059 0.451 NK L1
ENSG00000133639 BTG1 -341760 sc-eQTL 6.85e-01 0.0144 0.0355 0.451 Other_T L1
ENSG00000245904 AC025164.1 -341487 sc-eQTL 3.03e-01 0.0773 0.0749 0.451 Other_T L1
ENSG00000257242 LINC01619 -338828 sc-eQTL 3.23e-03 0.206 0.0691 0.451 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -341760 sc-eQTL 3.25e-01 0.0455 0.0461 0.454 B_Activated L2
ENSG00000187510 C12orf74 -898757 sc-eQTL 2.59e-01 -0.092 0.0812 0.454 B_Activated L2
ENSG00000205056 LINC02397 -662365 sc-eQTL 9.64e-01 -0.00381 0.0849 0.454 B_Activated L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 4.39e-01 -0.0697 0.0899 0.454 B_Activated L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 5.49e-01 0.042 0.07 0.454 B_Activated L2
ENSG00000277851 LINC02391 -559746 sc-eQTL 3.82e-01 0.0659 0.0751 0.454 B_Activated L2
ENSG00000133639 BTG1 -341760 sc-eQTL 9.51e-01 0.00286 0.0461 0.448 B_Intermediate L2
ENSG00000187510 C12orf74 -898757 sc-eQTL 7.51e-01 0.0253 0.0797 0.448 B_Intermediate L2
ENSG00000205056 LINC02397 -662365 sc-eQTL 1.01e-01 -0.0966 0.0586 0.448 B_Intermediate L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 9.12e-01 0.00714 0.0646 0.448 B_Intermediate L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 4.24e-01 0.0507 0.0633 0.448 B_Intermediate L2
ENSG00000277851 LINC02391 -559746 sc-eQTL 2.75e-01 0.0906 0.0828 0.448 B_Intermediate L2
ENSG00000133639 BTG1 -341760 sc-eQTL 6.24e-01 0.0208 0.0424 0.45 B_Memory L2
ENSG00000187510 C12orf74 -898757 sc-eQTL 3.42e-01 -0.0702 0.0737 0.45 B_Memory L2
ENSG00000205056 LINC02397 -662365 sc-eQTL 8.20e-01 -0.0163 0.0717 0.45 B_Memory L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 5.32e-01 0.0471 0.0753 0.45 B_Memory L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 8.95e-01 0.0089 0.0675 0.45 B_Memory L2
ENSG00000277851 LINC02391 -559746 sc-eQTL 5.59e-01 -0.0473 0.0808 0.45 B_Memory L2
ENSG00000133639 BTG1 -341760 sc-eQTL 8.85e-01 0.00626 0.0432 0.451 B_Naive1 L2
ENSG00000187510 C12orf74 -898757 sc-eQTL 1.90e-01 0.0999 0.076 0.451 B_Naive1 L2
ENSG00000205056 LINC02397 -662365 sc-eQTL 6.00e-01 0.0244 0.0465 0.451 B_Naive1 L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 4.37e-01 0.0486 0.0624 0.451 B_Naive1 L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 5.59e-01 -0.0363 0.0619 0.451 B_Naive1 L2
ENSG00000277851 LINC02391 -559746 sc-eQTL 9.90e-01 -0.000974 0.0762 0.451 B_Naive1 L2
ENSG00000133639 BTG1 -341760 sc-eQTL 1.69e-01 -0.0573 0.0415 0.453 B_Naive2 L2
ENSG00000187510 C12orf74 -898757 sc-eQTL 9.32e-01 0.00522 0.0606 0.453 B_Naive2 L2
ENSG00000205056 LINC02397 -662365 sc-eQTL 7.32e-01 -0.0149 0.0435 0.453 B_Naive2 L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 6.26e-04 -0.232 0.0667 0.453 B_Naive2 L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 1.32e-01 -0.0989 0.0654 0.453 B_Naive2 L2
ENSG00000277851 LINC02391 -559746 sc-eQTL 3.24e-01 -0.0802 0.0811 0.453 B_Naive2 L2
ENSG00000133639 BTG1 -341760 sc-eQTL 1.52e-01 -0.0844 0.0587 0.45 CD4_CTL L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 7.70e-02 -0.163 0.0919 0.45 CD4_CTL L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 5.72e-01 -0.0473 0.0836 0.45 CD4_CTL L2
ENSG00000133639 BTG1 -341760 sc-eQTL 2.49e-01 0.0555 0.048 0.451 CD4_Naive L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 5.04e-01 -0.0435 0.0651 0.451 CD4_Naive L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 7.41e-01 0.0207 0.0626 0.451 CD4_Naive L2
ENSG00000133639 BTG1 -341760 sc-eQTL 9.84e-01 -0.000902 0.0463 0.451 CD4_TCM L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 6.19e-01 -0.0345 0.0694 0.451 CD4_TCM L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 7.66e-01 0.0179 0.0599 0.451 CD4_TCM L2
ENSG00000133639 BTG1 -341760 sc-eQTL 6.65e-01 -0.0245 0.0567 0.451 CD4_TEM L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 7.67e-01 -0.0247 0.0832 0.451 CD4_TEM L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 5.17e-02 0.155 0.0792 0.451 CD4_TEM L2
ENSG00000133639 BTG1 -341760 sc-eQTL 9.49e-01 0.00298 0.0469 0.451 CD8_CTL L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 1.97e-01 -0.0993 0.0766 0.451 CD8_CTL L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 5.11e-01 0.0457 0.0694 0.451 CD8_CTL L2
ENSG00000133639 BTG1 -341760 sc-eQTL 8.57e-01 0.0108 0.0599 0.451 CD8_Naive L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 3.85e-01 -0.0646 0.0742 0.451 CD8_Naive L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 5.33e-01 -0.0471 0.0755 0.451 CD8_Naive L2
ENSG00000133639 BTG1 -341760 sc-eQTL 8.00e-01 -0.0158 0.0625 0.463 CD8_TCM L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 2.98e-01 -0.0896 0.086 0.463 CD8_TCM L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 1.42e-01 0.126 0.0856 0.463 CD8_TCM L2
ENSG00000133639 BTG1 -341760 sc-eQTL 5.77e-01 -0.0349 0.0625 0.443 CD8_TEM L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 4.84e-01 -0.0649 0.0926 0.443 CD8_TEM L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 4.00e-01 0.0721 0.0855 0.443 CD8_TEM L2
ENSG00000133639 BTG1 -341760 sc-eQTL 3.40e-01 0.0519 0.0543 0.452 MAIT L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 9.70e-01 0.00314 0.0822 0.452 MAIT L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 9.00e-03 0.206 0.0781 0.452 MAIT L2
ENSG00000133639 BTG1 -341760 sc-eQTL 2.77e-01 0.0609 0.0559 0.453 NK_CD56bright L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 3.36e-02 0.168 0.0783 0.453 NK_CD56bright L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 8.25e-01 0.0181 0.0816 0.453 NK_CD56bright L2
ENSG00000133639 BTG1 -341760 sc-eQTL 6.55e-01 0.0195 0.0436 0.45 NK_CD56dim L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 1.32e-01 -0.11 0.0728 0.45 NK_CD56dim L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 1.52e-01 0.0977 0.0679 0.45 NK_CD56dim L2
ENSG00000133639 BTG1 -341760 sc-eQTL 5.93e-01 0.0304 0.0567 0.457 NK_HLA L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 6.83e-01 -0.0357 0.0872 0.457 NK_HLA L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 9.76e-01 -0.00228 0.0771 0.457 NK_HLA L2
ENSG00000133639 BTG1 -341760 sc-eQTL 3.67e-01 0.0411 0.0455 0.45 NK_cytokine L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 9.30e-01 0.00598 0.0679 0.45 NK_cytokine L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 9.63e-01 -0.00324 0.0689 0.45 NK_cytokine L2
ENSG00000133639 BTG1 -341760 sc-eQTL 1.79e-01 0.0703 0.052 0.426 PB L2
ENSG00000187510 C12orf74 -898757 sc-eQTL 3.04e-01 -0.109 0.105 0.426 PB L2
ENSG00000205056 LINC02397 -662365 sc-eQTL 7.28e-01 0.0285 0.0818 0.426 PB L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 5.82e-01 0.05 0.0907 0.426 PB L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 3.10e-01 0.1 0.0985 0.426 PB L2
ENSG00000277851 LINC02391 -559746 sc-eQTL 4.28e-01 0.0794 0.0998 0.426 PB L2
ENSG00000133639 BTG1 -341760 sc-eQTL 7.49e-01 0.0116 0.036 0.448 Pro_T L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 9.64e-01 -0.00363 0.0807 0.448 Pro_T L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 3.96e-01 0.0636 0.0748 0.448 Pro_T L2
ENSG00000133639 BTG1 -341760 sc-eQTL 3.66e-01 -0.0569 0.0628 0.451 Treg L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 4.98e-01 -0.0535 0.0788 0.451 Treg L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 1.18e-01 -0.136 0.0864 0.451 Treg L2
ENSG00000133639 BTG1 -341760 sc-eQTL 6.72e-01 0.0291 0.0686 0.437 cDC L2
ENSG00000205056 LINC02397 -662365 sc-eQTL 7.52e-01 0.0172 0.0543 0.437 cDC L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 8.07e-01 -0.0216 0.0884 0.437 cDC L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 9.83e-01 0.00173 0.0823 0.437 cDC L2
ENSG00000277851 LINC02391 -559746 sc-eQTL 5.46e-01 -0.0482 0.0797 0.437 cDC L2
ENSG00000133639 BTG1 -341760 sc-eQTL 4.86e-01 -0.0282 0.0404 0.451 cMono_IL1B L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 2.27e-01 -0.0769 0.0634 0.451 cMono_IL1B L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 4.69e-01 -0.0564 0.0778 0.451 cMono_IL1B L2
ENSG00000133639 BTG1 -341760 sc-eQTL 1.68e-01 0.0646 0.0467 0.451 cMono_S100A L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 5.76e-01 -0.0379 0.0677 0.451 cMono_S100A L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 3.09e-01 -0.0832 0.0815 0.451 cMono_S100A L2
ENSG00000133639 BTG1 -341760 sc-eQTL 9.77e-01 -0.00169 0.0589 0.464 gdT L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 5.23e-01 0.0607 0.0948 0.464 gdT L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 3.45e-01 0.0944 0.0996 0.464 gdT L2
ENSG00000133639 BTG1 -341760 sc-eQTL 3.49e-02 0.1 0.0473 0.451 intMono L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 3.48e-01 0.0711 0.0756 0.451 intMono L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 1.42e-01 -0.115 0.0782 0.451 intMono L2
ENSG00000133639 BTG1 -341760 sc-eQTL 6.76e-01 -0.0194 0.0463 0.452 ncMono L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 7.17e-01 -0.0267 0.0735 0.452 ncMono L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 8.45e-01 -0.0152 0.0775 0.452 ncMono L2
ENSG00000133639 BTG1 -341760 sc-eQTL 8.99e-01 -0.0119 0.0935 0.429 pDC L2
ENSG00000205056 LINC02397 -662365 sc-eQTL 3.13e-01 -0.0869 0.0859 0.429 pDC L2
ENSG00000245904 AC025164.1 -341487 sc-eQTL 2.77e-01 -0.0952 0.0872 0.429 pDC L2
ENSG00000257242 LINC01619 -338828 sc-eQTL 5.68e-01 0.0468 0.0818 0.429 pDC L2
ENSG00000277851 LINC02391 -559746 sc-eQTL 1.75e-01 0.0946 0.0694 0.429 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -341760 sc-eQTL 8.28e-01 0.0088 0.0405 0.451 B_Memory LOneK1K
ENSG00000187510 C12orf74 -898757 sc-eQTL 2.23e-01 -0.0786 0.0644 0.451 B_Memory LOneK1K
ENSG00000205056 LINC02397 -662365 sc-eQTL 1.07e-01 -0.0913 0.0565 0.451 B_Memory LOneK1K
ENSG00000245904 AC025164.1 -341487 sc-eQTL 5.31e-01 -0.037 0.059 0.451 B_Memory LOneK1K
ENSG00000257242 LINC01619 -338828 sc-eQTL 5.24e-01 0.0361 0.0565 0.451 B_Memory LOneK1K
ENSG00000277851 LINC02391 -559746 sc-eQTL 4.05e-01 0.0716 0.0859 0.451 B_Memory LOneK1K
ENSG00000133639 BTG1 -341760 sc-eQTL 8.79e-01 -0.00579 0.0379 0.451 B_Naive LOneK1K
ENSG00000187510 C12orf74 -898757 sc-eQTL 2.29e-01 0.0943 0.0782 0.451 B_Naive LOneK1K
ENSG00000205056 LINC02397 -662365 sc-eQTL 7.50e-01 0.0119 0.0374 0.451 B_Naive LOneK1K
ENSG00000245904 AC025164.1 -341487 sc-eQTL 3.61e-01 -0.0522 0.057 0.451 B_Naive LOneK1K
ENSG00000257242 LINC01619 -338828 sc-eQTL 4.84e-01 -0.0389 0.0555 0.451 B_Naive LOneK1K
ENSG00000277851 LINC02391 -559746 sc-eQTL 4.61e-01 -0.0556 0.0753 0.451 B_Naive LOneK1K
ENSG00000133639 BTG1 -341760 sc-eQTL 8.84e-01 0.00567 0.0387 0.451 CD14_Mono LOneK1K
ENSG00000245904 AC025164.1 -341487 sc-eQTL 3.21e-01 -0.0607 0.0611 0.451 CD14_Mono LOneK1K
ENSG00000257242 LINC01619 -338828 sc-eQTL 2.53e-01 -0.087 0.0759 0.451 CD14_Mono LOneK1K
ENSG00000133639 BTG1 -341760 sc-eQTL 8.34e-01 0.00824 0.0392 0.448 CD16_Mono LOneK1K
ENSG00000245904 AC025164.1 -341487 sc-eQTL 3.74e-01 0.0604 0.0679 0.448 CD16_Mono LOneK1K
ENSG00000257242 LINC01619 -338828 sc-eQTL 2.56e-01 -0.0915 0.0803 0.448 CD16_Mono LOneK1K
ENSG00000133639 BTG1 -341760 sc-eQTL 2.19e-01 0.0503 0.0408 0.45 NK_CD56dim LOneK1K
ENSG00000245904 AC025164.1 -341487 sc-eQTL 3.78e-01 -0.0536 0.0608 0.45 NK_CD56dim LOneK1K
ENSG00000257242 LINC01619 -338828 sc-eQTL 3.80e-01 0.0526 0.0598 0.45 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000205056 \N -662365 3.27e-07 1.78e-07 6.45e-08 2.41e-07 1.05e-07 9.31e-08 3.11e-07 6.12e-08 1.94e-07 1.11e-07 2.84e-07 1.52e-07 3.6e-07 8.42e-08 6.2e-08 9.35e-08 5.42e-08 2.33e-07 7.27e-08 6.03e-08 1.24e-07 1.9e-07 1.89e-07 4.15e-08 3.98e-07 1.23e-07 1.23e-07 1.68e-07 1.44e-07 4.61e-07 1.39e-07 3.72e-08 4.87e-08 9.52e-08 9.25e-08 3.94e-08 4.47e-08 7.68e-08 6.21e-08 5.56e-08 5.87e-08 2.43e-07 3.99e-08 1.26e-08 3.61e-08 9.65e-09 8.98e-08 0.0 4.97e-08