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Genes within 1Mb (chr12:91793219:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -352627 sc-eQTL 3.92e-01 0.0338 0.0394 0.553 B L1
ENSG00000187510 C12orf74 -909624 sc-eQTL 7.79e-01 0.0154 0.0547 0.553 B L1
ENSG00000205056 LINC02397 -673232 sc-eQTL 2.79e-01 -0.0404 0.0372 0.553 B L1
ENSG00000245904 AC025164.1 -352354 sc-eQTL 7.22e-01 -0.0191 0.0536 0.553 B L1
ENSG00000257242 LINC01619 -349695 sc-eQTL 5.65e-01 0.0292 0.0506 0.553 B L1
ENSG00000277851 LINC02391 -570613 sc-eQTL 3.32e-01 0.0717 0.0737 0.553 B L1
ENSG00000133639 BTG1 -352627 sc-eQTL 7.82e-01 0.0136 0.0489 0.553 CD4T L1
ENSG00000245904 AC025164.1 -352354 sc-eQTL 5.63e-01 -0.0387 0.0668 0.553 CD4T L1
ENSG00000257242 LINC01619 -349695 sc-eQTL 9.24e-01 0.00599 0.0624 0.553 CD4T L1
ENSG00000133639 BTG1 -352627 sc-eQTL 2.73e-01 0.0528 0.048 0.553 CD8T L1
ENSG00000245904 AC025164.1 -352354 sc-eQTL 9.98e-01 0.000172 0.0627 0.553 CD8T L1
ENSG00000257242 LINC01619 -349695 sc-eQTL 6.60e-01 -0.0285 0.0647 0.553 CD8T L1
ENSG00000133639 BTG1 -352627 sc-eQTL 4.49e-01 0.0603 0.0795 0.541 DC L1
ENSG00000205056 LINC02397 -673232 sc-eQTL 6.26e-01 0.037 0.0759 0.541 DC L1
ENSG00000245904 AC025164.1 -352354 sc-eQTL 1.71e-01 -0.118 0.0859 0.541 DC L1
ENSG00000257242 LINC01619 -349695 sc-eQTL 9.29e-01 -0.00735 0.0827 0.541 DC L1
ENSG00000277851 LINC02391 -570613 sc-eQTL 4.75e-01 -0.0558 0.0781 0.541 DC L1
ENSG00000133639 BTG1 -352627 sc-eQTL 5.50e-01 0.0222 0.037 0.553 Mono L1
ENSG00000245904 AC025164.1 -352354 sc-eQTL 1.32e-01 -0.0908 0.06 0.553 Mono L1
ENSG00000257242 LINC01619 -349695 sc-eQTL 2.34e-01 -0.0882 0.0739 0.553 Mono L1
ENSG00000133639 BTG1 -352627 sc-eQTL 1.61e-01 0.0617 0.0439 0.554 NK L1
ENSG00000245904 AC025164.1 -352354 sc-eQTL 6.63e-01 0.0267 0.0611 0.554 NK L1
ENSG00000257242 LINC01619 -349695 sc-eQTL 3.27e-01 0.0597 0.0607 0.554 NK L1
ENSG00000133639 BTG1 -352627 sc-eQTL 6.42e-01 0.0169 0.0363 0.553 Other_T L1
ENSG00000245904 AC025164.1 -352354 sc-eQTL 6.74e-01 0.0323 0.0767 0.553 Other_T L1
ENSG00000257242 LINC01619 -349695 sc-eQTL 3.15e-03 0.211 0.0707 0.553 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -352627 sc-eQTL 2.97e-01 0.0494 0.0473 0.561 B_Activated L2
ENSG00000187510 C12orf74 -909624 sc-eQTL 2.97e-01 0.0873 0.0834 0.561 B_Activated L2
ENSG00000205056 LINC02397 -673232 sc-eQTL 7.41e-01 -0.0288 0.0871 0.561 B_Activated L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 1.72e-01 -0.126 0.0919 0.561 B_Activated L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 4.46e-01 0.0548 0.0718 0.561 B_Activated L2
ENSG00000277851 LINC02391 -570613 sc-eQTL 9.98e-02 0.127 0.0767 0.561 B_Activated L2
ENSG00000133639 BTG1 -352627 sc-eQTL 9.53e-01 -0.00276 0.0472 0.552 B_Intermediate L2
ENSG00000187510 C12orf74 -909624 sc-eQTL 6.55e-01 0.0365 0.0817 0.552 B_Intermediate L2
ENSG00000205056 LINC02397 -673232 sc-eQTL 8.21e-02 -0.105 0.06 0.552 B_Intermediate L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 8.49e-01 -0.0126 0.0663 0.552 B_Intermediate L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 8.82e-01 0.00967 0.0651 0.552 B_Intermediate L2
ENSG00000277851 LINC02391 -570613 sc-eQTL 2.32e-01 0.102 0.0848 0.552 B_Intermediate L2
ENSG00000133639 BTG1 -352627 sc-eQTL 2.23e-01 0.053 0.0434 0.552 B_Memory L2
ENSG00000187510 C12orf74 -909624 sc-eQTL 7.29e-01 0.0263 0.0758 0.552 B_Memory L2
ENSG00000205056 LINC02397 -673232 sc-eQTL 5.54e-02 -0.14 0.0729 0.552 B_Memory L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 6.35e-01 0.0368 0.0773 0.552 B_Memory L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 3.40e-01 -0.0661 0.0691 0.552 B_Memory L2
ENSG00000277851 LINC02391 -570613 sc-eQTL 9.68e-01 0.00336 0.083 0.552 B_Memory L2
ENSG00000133639 BTG1 -352627 sc-eQTL 9.27e-01 0.00411 0.0447 0.553 B_Naive1 L2
ENSG00000187510 C12orf74 -909624 sc-eQTL 5.14e-02 0.153 0.0783 0.553 B_Naive1 L2
ENSG00000205056 LINC02397 -673232 sc-eQTL 4.37e-01 -0.0374 0.048 0.553 B_Naive1 L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 7.67e-01 0.0192 0.0647 0.553 B_Naive1 L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 9.21e-01 0.00638 0.0641 0.553 B_Naive1 L2
ENSG00000277851 LINC02391 -570613 sc-eQTL 3.97e-02 0.162 0.0781 0.553 B_Naive1 L2
ENSG00000133639 BTG1 -352627 sc-eQTL 2.05e-01 -0.0547 0.043 0.554 B_Naive2 L2
ENSG00000187510 C12orf74 -909624 sc-eQTL 4.30e-01 0.0495 0.0626 0.554 B_Naive2 L2
ENSG00000205056 LINC02397 -673232 sc-eQTL 2.63e-01 -0.0504 0.0449 0.554 B_Naive2 L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 1.43e-03 -0.224 0.0693 0.554 B_Naive2 L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 2.31e-01 -0.0814 0.0677 0.554 B_Naive2 L2
ENSG00000277851 LINC02391 -570613 sc-eQTL 5.55e-01 -0.0496 0.084 0.554 B_Naive2 L2
ENSG00000133639 BTG1 -352627 sc-eQTL 2.08e-01 -0.0748 0.0593 0.552 CD4_CTL L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 1.42e-01 -0.137 0.0929 0.552 CD4_CTL L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 6.85e-01 0.0343 0.0844 0.552 CD4_CTL L2
ENSG00000133639 BTG1 -352627 sc-eQTL 2.75e-01 0.0539 0.0493 0.553 CD4_Naive L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 4.47e-01 -0.0509 0.0668 0.553 CD4_Naive L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 9.87e-01 -0.00109 0.0643 0.553 CD4_Naive L2
ENSG00000133639 BTG1 -352627 sc-eQTL 9.23e-01 -0.00459 0.0473 0.553 CD4_TCM L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 9.69e-02 -0.118 0.0706 0.553 CD4_TCM L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 5.81e-01 0.0338 0.0612 0.553 CD4_TCM L2
ENSG00000133639 BTG1 -352627 sc-eQTL 2.30e-01 -0.0693 0.0575 0.553 CD4_TEM L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 7.35e-01 -0.0288 0.0847 0.553 CD4_TEM L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 1.64e-01 0.113 0.081 0.553 CD4_TEM L2
ENSG00000133639 BTG1 -352627 sc-eQTL 5.85e-01 -0.0262 0.0479 0.553 CD8_CTL L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 3.64e-01 -0.0714 0.0785 0.553 CD8_CTL L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 2.42e-01 0.083 0.0708 0.553 CD8_CTL L2
ENSG00000133639 BTG1 -352627 sc-eQTL 2.99e-01 0.0634 0.0608 0.553 CD8_Naive L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 7.93e-01 0.0199 0.0757 0.553 CD8_Naive L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 5.09e-01 -0.0508 0.0768 0.553 CD8_Naive L2
ENSG00000133639 BTG1 -352627 sc-eQTL 3.99e-01 -0.0536 0.0634 0.553 CD8_TCM L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 5.39e-02 -0.168 0.0867 0.553 CD8_TCM L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 2.34e-01 0.104 0.0871 0.553 CD8_TCM L2
ENSG00000133639 BTG1 -352627 sc-eQTL 1.65e-01 -0.0903 0.0647 0.546 CD8_TEM L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 6.73e-01 -0.0407 0.0964 0.546 CD8_TEM L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 4.34e-01 0.0698 0.089 0.546 CD8_TEM L2
ENSG00000133639 BTG1 -352627 sc-eQTL 1.48e-01 0.0809 0.0557 0.554 MAIT L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 5.07e-01 -0.056 0.0843 0.554 MAIT L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 3.06e-02 0.176 0.0806 0.554 MAIT L2
ENSG00000133639 BTG1 -352627 sc-eQTL 3.88e-01 0.0507 0.0586 0.547 NK_CD56bright L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 5.96e-01 0.044 0.083 0.547 NK_CD56bright L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 8.81e-01 -0.0129 0.0856 0.547 NK_CD56bright L2
ENSG00000133639 BTG1 -352627 sc-eQTL 6.23e-01 0.022 0.0448 0.554 NK_CD56dim L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 4.53e-01 -0.0564 0.0751 0.554 NK_CD56dim L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 1.01e-01 0.115 0.0696 0.554 NK_CD56dim L2
ENSG00000133639 BTG1 -352627 sc-eQTL 6.09e-01 -0.0304 0.0593 0.557 NK_HLA L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 5.80e-01 -0.0506 0.0912 0.557 NK_HLA L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 3.67e-01 -0.0727 0.0804 0.557 NK_HLA L2
ENSG00000133639 BTG1 -352627 sc-eQTL 5.57e-01 0.0278 0.0473 0.554 NK_cytokine L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 6.89e-01 0.0283 0.0704 0.554 NK_cytokine L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 9.36e-01 0.00572 0.0715 0.554 NK_cytokine L2
ENSG00000133639 BTG1 -352627 sc-eQTL 9.44e-02 0.0915 0.0543 0.552 PB L2
ENSG00000187510 C12orf74 -909624 sc-eQTL 2.62e-01 -0.124 0.11 0.552 PB L2
ENSG00000205056 LINC02397 -673232 sc-eQTL 2.78e-01 0.093 0.0853 0.552 PB L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 2.55e-01 0.108 0.0946 0.552 PB L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 6.48e-01 0.0474 0.104 0.552 PB L2
ENSG00000277851 LINC02391 -570613 sc-eQTL 2.74e-01 0.115 0.104 0.552 PB L2
ENSG00000133639 BTG1 -352627 sc-eQTL 6.58e-01 0.0165 0.0371 0.548 Pro_T L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 6.61e-01 -0.0365 0.0831 0.548 Pro_T L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 1.87e-01 0.102 0.0769 0.548 Pro_T L2
ENSG00000133639 BTG1 -352627 sc-eQTL 2.98e-01 -0.0668 0.064 0.553 Treg L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 5.89e-01 -0.0435 0.0803 0.553 Treg L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 5.99e-03 -0.242 0.087 0.553 Treg L2
ENSG00000133639 BTG1 -352627 sc-eQTL 4.86e-01 0.0485 0.0695 0.544 cDC L2
ENSG00000205056 LINC02397 -673232 sc-eQTL 9.65e-01 0.00244 0.0551 0.544 cDC L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 9.51e-01 -0.00546 0.0896 0.544 cDC L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 4.34e-01 -0.0654 0.0834 0.544 cDC L2
ENSG00000277851 LINC02391 -570613 sc-eQTL 3.39e-01 -0.0775 0.0807 0.544 cDC L2
ENSG00000133639 BTG1 -352627 sc-eQTL 4.58e-01 -0.0311 0.0418 0.553 cMono_IL1B L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 6.82e-02 -0.12 0.0652 0.553 cMono_IL1B L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 5.25e-01 -0.0511 0.0804 0.553 cMono_IL1B L2
ENSG00000133639 BTG1 -352627 sc-eQTL 1.92e-01 0.0628 0.048 0.553 cMono_S100A L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 3.01e-01 -0.0721 0.0695 0.553 cMono_S100A L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 1.46e-01 -0.122 0.0837 0.553 cMono_S100A L2
ENSG00000133639 BTG1 -352627 sc-eQTL 9.38e-01 0.00461 0.0592 0.542 gdT L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 8.08e-01 -0.0233 0.0955 0.542 gdT L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 1.82e-01 0.134 0.0998 0.542 gdT L2
ENSG00000133639 BTG1 -352627 sc-eQTL 4.63e-02 0.098 0.0489 0.553 intMono L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 5.60e-01 0.0456 0.0782 0.553 intMono L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 6.53e-02 -0.149 0.0805 0.553 intMono L2
ENSG00000133639 BTG1 -352627 sc-eQTL 6.21e-01 -0.0239 0.0483 0.557 ncMono L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 5.11e-01 -0.0505 0.0767 0.557 ncMono L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 9.93e-01 0.000722 0.0809 0.557 ncMono L2
ENSG00000133639 BTG1 -352627 sc-eQTL 5.77e-01 -0.0537 0.096 0.534 pDC L2
ENSG00000205056 LINC02397 -673232 sc-eQTL 4.41e-01 -0.0684 0.0885 0.534 pDC L2
ENSG00000245904 AC025164.1 -352354 sc-eQTL 2.26e-01 -0.109 0.0896 0.534 pDC L2
ENSG00000257242 LINC01619 -349695 sc-eQTL 5.59e-01 0.0493 0.0841 0.534 pDC L2
ENSG00000277851 LINC02391 -570613 sc-eQTL 2.24e-01 0.0873 0.0715 0.534 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -352627 sc-eQTL 5.34e-01 0.0261 0.0419 0.553 B_Memory LOneK1K
ENSG00000187510 C12orf74 -909624 sc-eQTL 6.83e-01 0.0274 0.067 0.553 B_Memory LOneK1K
ENSG00000205056 LINC02397 -673232 sc-eQTL 2.14e-02 -0.135 0.0582 0.553 B_Memory LOneK1K
ENSG00000245904 AC025164.1 -352354 sc-eQTL 1.77e-01 -0.0825 0.0609 0.553 B_Memory LOneK1K
ENSG00000257242 LINC01619 -349695 sc-eQTL 4.53e-01 -0.044 0.0585 0.553 B_Memory LOneK1K
ENSG00000277851 LINC02391 -570613 sc-eQTL 2.69e-01 0.0985 0.0889 0.553 B_Memory LOneK1K
ENSG00000133639 BTG1 -352627 sc-eQTL 9.16e-01 -0.00415 0.0394 0.553 B_Naive LOneK1K
ENSG00000187510 C12orf74 -909624 sc-eQTL 8.80e-02 0.139 0.0811 0.553 B_Naive LOneK1K
ENSG00000205056 LINC02397 -673232 sc-eQTL 2.11e-01 -0.0487 0.0388 0.553 B_Naive LOneK1K
ENSG00000245904 AC025164.1 -352354 sc-eQTL 3.03e-01 -0.0612 0.0593 0.553 B_Naive LOneK1K
ENSG00000257242 LINC01619 -349695 sc-eQTL 7.47e-01 0.0187 0.0578 0.553 B_Naive LOneK1K
ENSG00000277851 LINC02391 -570613 sc-eQTL 2.53e-01 0.0897 0.0782 0.553 B_Naive LOneK1K
ENSG00000133639 BTG1 -352627 sc-eQTL 9.69e-01 -0.00153 0.0397 0.553 CD14_Mono LOneK1K
ENSG00000245904 AC025164.1 -352354 sc-eQTL 8.46e-02 -0.108 0.0624 0.553 CD14_Mono LOneK1K
ENSG00000257242 LINC01619 -349695 sc-eQTL 1.75e-01 -0.106 0.0778 0.553 CD14_Mono LOneK1K
ENSG00000133639 BTG1 -352627 sc-eQTL 8.62e-01 -0.00701 0.0404 0.552 CD16_Mono LOneK1K
ENSG00000245904 AC025164.1 -352354 sc-eQTL 7.68e-01 0.0207 0.0701 0.552 CD16_Mono LOneK1K
ENSG00000257242 LINC01619 -349695 sc-eQTL 1.65e-01 -0.115 0.0827 0.552 CD16_Mono LOneK1K
ENSG00000133639 BTG1 -352627 sc-eQTL 2.60e-01 0.0479 0.0424 0.554 NK_CD56dim LOneK1K
ENSG00000245904 AC025164.1 -352354 sc-eQTL 7.81e-01 -0.0176 0.0633 0.554 NK_CD56dim LOneK1K
ENSG00000257242 LINC01619 -349695 sc-eQTL 3.39e-01 0.0595 0.0621 0.554 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000205056 LINC02397 -673232 eQTL 0.0459 -0.0361 0.018 0.0 0.0 0.464

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000205056 LINC02397 -673232 3.1e-07 1.56e-07 7e-08 2.2e-07 1.07e-07 8.75e-08 2.16e-07 5.84e-08 1.86e-07 1.05e-07 1.69e-07 1.46e-07 2.29e-07 8.07e-08 5.97e-08 9.6e-08 5.42e-08 1.91e-07 7.36e-08 6.03e-08 1.23e-07 1.76e-07 1.68e-07 4.07e-08 2.09e-07 1.56e-07 1.31e-07 1.17e-07 1.37e-07 1.29e-07 1.21e-07 4.69e-08 3.74e-08 9.52e-08 4.41e-08 3.24e-08 3.7e-08 7.68e-08 6.35e-08 5.35e-08 6.28e-08 1.59e-07 3.02e-08 7.47e-09 3.4e-08 6.53e-09 7.13e-08 2.23e-09 4.72e-08