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Genes within 1Mb (chr12:91742852:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -402994 sc-eQTL 6.24e-01 0.0215 0.0438 0.276 B L1
ENSG00000187510 C12orf74 -959991 sc-eQTL 5.04e-01 0.0406 0.0606 0.276 B L1
ENSG00000205056 LINC02397 -723599 sc-eQTL 7.97e-01 -0.0106 0.0414 0.276 B L1
ENSG00000245904 AC025164.1 -402721 sc-eQTL 4.71e-01 0.0429 0.0594 0.276 B L1
ENSG00000257242 LINC01619 -400062 sc-eQTL 2.89e-01 0.0596 0.0561 0.276 B L1
ENSG00000277851 LINC02391 -620980 sc-eQTL 3.03e-01 -0.0843 0.0817 0.276 B L1
ENSG00000133639 BTG1 -402994 sc-eQTL 4.57e-01 -0.0411 0.0552 0.276 CD4T L1
ENSG00000245904 AC025164.1 -402721 sc-eQTL 2.37e-01 -0.0893 0.0753 0.276 CD4T L1
ENSG00000257242 LINC01619 -400062 sc-eQTL 4.33e-01 0.0554 0.0704 0.276 CD4T L1
ENSG00000133639 BTG1 -402994 sc-eQTL 7.42e-01 0.0178 0.0539 0.276 CD8T L1
ENSG00000245904 AC025164.1 -402721 sc-eQTL 5.94e-01 -0.0374 0.0701 0.276 CD8T L1
ENSG00000257242 LINC01619 -400062 sc-eQTL 6.17e-01 0.0362 0.0724 0.276 CD8T L1
ENSG00000133639 BTG1 -402994 sc-eQTL 7.78e-01 0.026 0.0922 0.277 DC L1
ENSG00000205056 LINC02397 -723599 sc-eQTL 1.45e-01 0.128 0.0875 0.277 DC L1
ENSG00000245904 AC025164.1 -402721 sc-eQTL 2.63e-01 -0.112 0.0996 0.277 DC L1
ENSG00000257242 LINC01619 -400062 sc-eQTL 3.99e-01 0.0808 0.0955 0.277 DC L1
ENSG00000277851 LINC02391 -620980 sc-eQTL 6.06e-01 0.0468 0.0905 0.277 DC L1
ENSG00000133639 BTG1 -402994 sc-eQTL 2.11e-01 -0.0538 0.0429 0.276 Mono L1
ENSG00000245904 AC025164.1 -402721 sc-eQTL 3.18e-02 -0.15 0.0694 0.276 Mono L1
ENSG00000257242 LINC01619 -400062 sc-eQTL 6.97e-01 -0.0336 0.0861 0.276 Mono L1
ENSG00000133639 BTG1 -402994 sc-eQTL 5.67e-01 -0.0288 0.0503 0.277 NK L1
ENSG00000245904 AC025164.1 -402721 sc-eQTL 6.89e-01 -0.028 0.0699 0.277 NK L1
ENSG00000257242 LINC01619 -400062 sc-eQTL 1.53e-02 0.168 0.0686 0.277 NK L1
ENSG00000133639 BTG1 -402994 sc-eQTL 6.06e-01 0.0212 0.041 0.276 Other_T L1
ENSG00000245904 AC025164.1 -402721 sc-eQTL 4.23e-01 -0.0696 0.0868 0.276 Other_T L1
ENSG00000257242 LINC01619 -400062 sc-eQTL 7.11e-03 0.218 0.0803 0.276 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -402994 sc-eQTL 1.81e-01 -0.0753 0.0561 0.27 B_Activated L2
ENSG00000187510 C12orf74 -959991 sc-eQTL 6.11e-01 -0.0507 0.0995 0.27 B_Activated L2
ENSG00000205056 LINC02397 -723599 sc-eQTL 7.73e-01 0.03 0.104 0.27 B_Activated L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 9.21e-01 -0.011 0.11 0.27 B_Activated L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 8.94e-01 -0.0114 0.0855 0.27 B_Activated L2
ENSG00000277851 LINC02391 -620980 sc-eQTL 7.98e-01 0.0236 0.0919 0.27 B_Activated L2
ENSG00000133639 BTG1 -402994 sc-eQTL 4.73e-01 -0.0395 0.0549 0.273 B_Intermediate L2
ENSG00000187510 C12orf74 -959991 sc-eQTL 5.99e-01 0.0501 0.0951 0.273 B_Intermediate L2
ENSG00000205056 LINC02397 -723599 sc-eQTL 9.69e-01 0.00277 0.0704 0.273 B_Intermediate L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 3.85e-01 -0.067 0.077 0.273 B_Intermediate L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 8.02e-01 -0.019 0.0757 0.273 B_Intermediate L2
ENSG00000277851 LINC02391 -620980 sc-eQTL 5.53e-01 0.0589 0.099 0.273 B_Intermediate L2
ENSG00000133639 BTG1 -402994 sc-eQTL 9.72e-01 -0.00177 0.0499 0.278 B_Memory L2
ENSG00000187510 C12orf74 -959991 sc-eQTL 3.70e-01 0.0778 0.0867 0.278 B_Memory L2
ENSG00000205056 LINC02397 -723599 sc-eQTL 2.76e-01 -0.0918 0.084 0.278 B_Memory L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 9.80e-01 -0.00222 0.0886 0.278 B_Memory L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 2.62e-01 -0.0889 0.0791 0.278 B_Memory L2
ENSG00000277851 LINC02391 -620980 sc-eQTL 7.59e-01 -0.0292 0.0951 0.278 B_Memory L2
ENSG00000133639 BTG1 -402994 sc-eQTL 3.23e-01 -0.05 0.0505 0.276 B_Naive1 L2
ENSG00000187510 C12orf74 -959991 sc-eQTL 9.86e-01 -0.00153 0.0893 0.276 B_Naive1 L2
ENSG00000205056 LINC02397 -723599 sc-eQTL 8.67e-01 0.00912 0.0544 0.276 B_Naive1 L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 4.14e-01 0.0598 0.073 0.276 B_Naive1 L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 2.83e-01 0.0778 0.0724 0.276 B_Naive1 L2
ENSG00000277851 LINC02391 -620980 sc-eQTL 7.27e-01 -0.0312 0.0892 0.276 B_Naive1 L2
ENSG00000133639 BTG1 -402994 sc-eQTL 6.58e-02 -0.0899 0.0486 0.277 B_Naive2 L2
ENSG00000187510 C12orf74 -959991 sc-eQTL 6.32e-01 0.0342 0.0712 0.277 B_Naive2 L2
ENSG00000205056 LINC02397 -723599 sc-eQTL 1.92e-01 -0.0666 0.0509 0.277 B_Naive2 L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 1.35e-01 -0.12 0.0802 0.277 B_Naive2 L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 4.61e-01 -0.0569 0.0771 0.277 B_Naive2 L2
ENSG00000277851 LINC02391 -620980 sc-eQTL 6.36e-02 -0.177 0.0947 0.277 B_Naive2 L2
ENSG00000133639 BTG1 -402994 sc-eQTL 6.38e-01 -0.0313 0.0663 0.284 CD4_CTL L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 3.04e-01 -0.107 0.104 0.284 CD4_CTL L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 6.89e-01 -0.0377 0.0941 0.284 CD4_CTL L2
ENSG00000133639 BTG1 -402994 sc-eQTL 7.73e-01 -0.0161 0.0557 0.276 CD4_Naive L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 3.58e-01 -0.0694 0.0753 0.276 CD4_Naive L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 4.35e-01 0.0566 0.0724 0.276 CD4_Naive L2
ENSG00000133639 BTG1 -402994 sc-eQTL 2.38e-01 -0.063 0.0533 0.276 CD4_TCM L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 6.11e-02 -0.15 0.0796 0.276 CD4_TCM L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 5.97e-02 0.13 0.0686 0.276 CD4_TCM L2
ENSG00000133639 BTG1 -402994 sc-eQTL 5.53e-01 -0.0389 0.0655 0.276 CD4_TEM L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 2.85e-02 -0.21 0.0951 0.276 CD4_TEM L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 1.86e-01 0.122 0.0921 0.276 CD4_TEM L2
ENSG00000133639 BTG1 -402994 sc-eQTL 8.53e-01 -0.0102 0.0549 0.276 CD8_CTL L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 8.46e-02 -0.155 0.0895 0.276 CD8_CTL L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 5.61e-01 -0.0473 0.0813 0.276 CD8_CTL L2
ENSG00000133639 BTG1 -402994 sc-eQTL 9.23e-01 0.00675 0.0695 0.276 CD8_Naive L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 5.82e-01 -0.0475 0.0862 0.276 CD8_Naive L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 2.85e-01 0.0937 0.0874 0.276 CD8_Naive L2
ENSG00000133639 BTG1 -402994 sc-eQTL 8.68e-01 -0.0122 0.073 0.285 CD8_TCM L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 5.07e-01 -0.0668 0.101 0.285 CD8_TCM L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 3.34e-01 0.0972 0.1 0.285 CD8_TCM L2
ENSG00000133639 BTG1 -402994 sc-eQTL 4.92e-01 0.05 0.0726 0.272 CD8_TEM L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 7.22e-02 -0.193 0.107 0.272 CD8_TEM L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 5.43e-02 0.191 0.0986 0.272 CD8_TEM L2
ENSG00000133639 BTG1 -402994 sc-eQTL 4.20e-01 0.0504 0.0624 0.275 MAIT L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 3.47e-01 -0.0886 0.0941 0.275 MAIT L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 6.91e-02 0.165 0.0904 0.275 MAIT L2
ENSG00000133639 BTG1 -402994 sc-eQTL 8.20e-01 -0.0151 0.0664 0.276 NK_CD56bright L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 3.97e-01 0.0795 0.0937 0.276 NK_CD56bright L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 3.51e-01 0.0903 0.0966 0.276 NK_CD56bright L2
ENSG00000133639 BTG1 -402994 sc-eQTL 2.93e-01 -0.0537 0.0509 0.276 NK_CD56dim L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 4.41e-01 -0.0662 0.0856 0.276 NK_CD56dim L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 3.61e-01 0.073 0.0797 0.276 NK_CD56dim L2
ENSG00000133639 BTG1 -402994 sc-eQTL 4.74e-01 -0.0481 0.0671 0.285 NK_HLA L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 8.01e-01 0.026 0.103 0.285 NK_HLA L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 5.20e-01 0.0587 0.0911 0.285 NK_HLA L2
ENSG00000133639 BTG1 -402994 sc-eQTL 7.02e-01 -0.0205 0.0535 0.276 NK_cytokine L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 7.81e-01 -0.0221 0.0796 0.276 NK_cytokine L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 4.19e-01 0.0654 0.0807 0.276 NK_cytokine L2
ENSG00000133639 BTG1 -402994 sc-eQTL 9.31e-01 -0.00527 0.0605 0.263 PB L2
ENSG00000187510 C12orf74 -959991 sc-eQTL 9.47e-01 -0.00807 0.122 0.263 PB L2
ENSG00000205056 LINC02397 -723599 sc-eQTL 4.03e-01 0.079 0.0941 0.263 PB L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 6.86e-01 0.0425 0.105 0.263 PB L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 9.37e-01 -0.00911 0.114 0.263 PB L2
ENSG00000277851 LINC02391 -620980 sc-eQTL 2.44e-01 0.134 0.115 0.263 PB L2
ENSG00000133639 BTG1 -402994 sc-eQTL 1.06e-01 0.0692 0.0427 0.274 Pro_T L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 9.10e-01 0.0108 0.0961 0.274 Pro_T L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 5.34e-01 0.0555 0.0891 0.274 Pro_T L2
ENSG00000133639 BTG1 -402994 sc-eQTL 5.82e-01 -0.0409 0.0742 0.276 Treg L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 5.52e-01 -0.0553 0.093 0.276 Treg L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 4.33e-01 -0.0805 0.102 0.276 Treg L2
ENSG00000133639 BTG1 -402994 sc-eQTL 8.67e-01 -0.014 0.0838 0.273 cDC L2
ENSG00000205056 LINC02397 -723599 sc-eQTL 2.90e-01 0.0701 0.0661 0.273 cDC L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 8.42e-01 -0.0216 0.108 0.273 cDC L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 8.41e-01 0.0202 0.1 0.273 cDC L2
ENSG00000277851 LINC02391 -620980 sc-eQTL 8.48e-01 0.0187 0.0974 0.273 cDC L2
ENSG00000133639 BTG1 -402994 sc-eQTL 9.05e-02 -0.082 0.0482 0.276 cMono_IL1B L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 3.99e-02 -0.156 0.0756 0.276 cMono_IL1B L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 9.71e-01 0.00335 0.0934 0.276 cMono_IL1B L2
ENSG00000133639 BTG1 -402994 sc-eQTL 5.72e-01 -0.0314 0.0555 0.276 cMono_S100A L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 1.27e-02 -0.199 0.0791 0.276 cMono_S100A L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 5.62e-01 -0.0563 0.0968 0.276 cMono_S100A L2
ENSG00000133639 BTG1 -402994 sc-eQTL 1.55e-01 -0.0963 0.0673 0.288 gdT L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 6.86e-01 0.0443 0.109 0.288 gdT L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 2.77e-01 0.125 0.115 0.288 gdT L2
ENSG00000133639 BTG1 -402994 sc-eQTL 3.16e-01 0.0569 0.0566 0.278 intMono L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 5.05e-01 0.06 0.0898 0.278 intMono L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 7.46e-01 -0.0303 0.0933 0.278 intMono L2
ENSG00000133639 BTG1 -402994 sc-eQTL 4.61e-01 -0.04 0.0542 0.283 ncMono L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 1.53e-01 -0.123 0.0858 0.283 ncMono L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 7.65e-02 -0.161 0.0901 0.283 ncMono L2
ENSG00000133639 BTG1 -402994 sc-eQTL 3.58e-01 -0.104 0.112 0.274 pDC L2
ENSG00000205056 LINC02397 -723599 sc-eQTL 8.51e-01 0.0196 0.104 0.274 pDC L2
ENSG00000245904 AC025164.1 -402721 sc-eQTL 1.42e-01 -0.155 0.105 0.274 pDC L2
ENSG00000257242 LINC01619 -400062 sc-eQTL 5.01e-01 0.0664 0.0984 0.274 pDC L2
ENSG00000277851 LINC02391 -620980 sc-eQTL 3.55e-01 0.0779 0.0839 0.274 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -402994 sc-eQTL 7.22e-01 -0.0168 0.0473 0.276 B_Memory LOneK1K
ENSG00000187510 C12orf74 -959991 sc-eQTL 5.75e-01 0.0424 0.0754 0.276 B_Memory LOneK1K
ENSG00000205056 LINC02397 -723599 sc-eQTL 8.10e-01 -0.016 0.0664 0.276 B_Memory LOneK1K
ENSG00000245904 AC025164.1 -402721 sc-eQTL 4.07e-01 -0.0571 0.0688 0.276 B_Memory LOneK1K
ENSG00000257242 LINC01619 -400062 sc-eQTL 2.86e-01 -0.0705 0.0658 0.276 B_Memory LOneK1K
ENSG00000277851 LINC02391 -620980 sc-eQTL 5.26e-01 0.0637 0.1 0.276 B_Memory LOneK1K
ENSG00000133639 BTG1 -402994 sc-eQTL 3.31e-01 -0.0435 0.0446 0.276 B_Naive LOneK1K
ENSG00000187510 C12orf74 -959991 sc-eQTL 7.52e-01 -0.0293 0.0927 0.276 B_Naive LOneK1K
ENSG00000205056 LINC02397 -723599 sc-eQTL 3.62e-01 -0.0402 0.0441 0.276 B_Naive LOneK1K
ENSG00000245904 AC025164.1 -402721 sc-eQTL 7.41e-01 -0.0223 0.0674 0.276 B_Naive LOneK1K
ENSG00000257242 LINC01619 -400062 sc-eQTL 6.63e-01 0.0286 0.0656 0.276 B_Naive LOneK1K
ENSG00000277851 LINC02391 -620980 sc-eQTL 2.09e-01 -0.112 0.0886 0.276 B_Naive LOneK1K
ENSG00000133639 BTG1 -402994 sc-eQTL 1.07e-01 -0.0742 0.0459 0.276 CD14_Mono LOneK1K
ENSG00000245904 AC025164.1 -402721 sc-eQTL 3.12e-02 -0.157 0.0722 0.276 CD14_Mono LOneK1K
ENSG00000257242 LINC01619 -400062 sc-eQTL 7.98e-01 -0.0233 0.0908 0.276 CD14_Mono LOneK1K
ENSG00000133639 BTG1 -402994 sc-eQTL 7.14e-01 -0.017 0.0462 0.278 CD16_Mono LOneK1K
ENSG00000245904 AC025164.1 -402721 sc-eQTL 5.91e-01 -0.0431 0.0802 0.278 CD16_Mono LOneK1K
ENSG00000257242 LINC01619 -400062 sc-eQTL 1.55e-01 -0.135 0.0946 0.278 CD16_Mono LOneK1K
ENSG00000133639 BTG1 -402994 sc-eQTL 6.78e-01 -0.0199 0.0478 0.276 NK_CD56dim LOneK1K
ENSG00000245904 AC025164.1 -402721 sc-eQTL 6.06e-01 -0.0367 0.0712 0.276 NK_CD56dim LOneK1K
ENSG00000257242 LINC01619 -400062 sc-eQTL 8.24e-02 0.121 0.0696 0.276 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000205056 \N -723599 2.8e-07 1.7e-07 4.91e-08 2.24e-07 9.8e-08 8.33e-08 1.9e-07 5.85e-08 1.44e-07 7.6e-08 1.62e-07 1.11e-07 2.05e-07 7.95e-08 5.82e-08 7.5e-08 4.31e-08 1.44e-07 7.16e-08 4.78e-08 1.25e-07 1.39e-07 1.58e-07 3.17e-08 1.72e-07 1.26e-07 1.1e-07 1.01e-07 1.26e-07 1.1e-07 1.06e-07 2.9e-08 4.02e-08 9.3e-08 4.92e-08 3.53e-08 6.24e-08 8.51e-08 6.41e-08 4.41e-08 4.02e-08 1.59e-07 5.27e-08 1.95e-08 4.25e-08 1.89e-08 1.22e-07 3.78e-09 4.82e-08