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Genes within 1Mb (chr12:91724506:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -421340 sc-eQTL 6.44e-01 0.0202 0.0437 0.274 B L1
ENSG00000187510 C12orf74 -978337 sc-eQTL 5.18e-01 0.0392 0.0606 0.274 B L1
ENSG00000205056 LINC02397 -741945 sc-eQTL 7.56e-01 -0.0129 0.0413 0.274 B L1
ENSG00000245904 AC025164.1 -421067 sc-eQTL 5.29e-01 0.0375 0.0594 0.274 B L1
ENSG00000257242 LINC01619 -418408 sc-eQTL 2.51e-01 0.0645 0.056 0.274 B L1
ENSG00000277851 LINC02391 -639326 sc-eQTL 3.47e-01 -0.077 0.0817 0.274 B L1
ENSG00000133639 BTG1 -421340 sc-eQTL 4.81e-01 -0.0389 0.0551 0.274 CD4T L1
ENSG00000245904 AC025164.1 -421067 sc-eQTL 2.37e-01 -0.0891 0.0752 0.274 CD4T L1
ENSG00000257242 LINC01619 -418408 sc-eQTL 3.62e-01 0.0642 0.0703 0.274 CD4T L1
ENSG00000133639 BTG1 -421340 sc-eQTL 7.42e-01 0.0177 0.0539 0.274 CD8T L1
ENSG00000245904 AC025164.1 -421067 sc-eQTL 5.72e-01 -0.0397 0.0701 0.274 CD8T L1
ENSG00000257242 LINC01619 -418408 sc-eQTL 6.40e-01 0.0339 0.0724 0.274 CD8T L1
ENSG00000133639 BTG1 -421340 sc-eQTL 8.33e-01 0.0195 0.092 0.275 DC L1
ENSG00000205056 LINC02397 -741945 sc-eQTL 1.29e-01 0.133 0.0872 0.275 DC L1
ENSG00000245904 AC025164.1 -421067 sc-eQTL 1.85e-01 -0.132 0.0993 0.275 DC L1
ENSG00000257242 LINC01619 -418408 sc-eQTL 5.24e-01 0.0609 0.0954 0.275 DC L1
ENSG00000277851 LINC02391 -639326 sc-eQTL 5.46e-01 0.0545 0.0902 0.275 DC L1
ENSG00000133639 BTG1 -421340 sc-eQTL 2.30e-01 -0.0515 0.0428 0.274 Mono L1
ENSG00000245904 AC025164.1 -421067 sc-eQTL 2.89e-02 -0.152 0.0692 0.274 Mono L1
ENSG00000257242 LINC01619 -418408 sc-eQTL 6.99e-01 -0.0333 0.086 0.274 Mono L1
ENSG00000133639 BTG1 -421340 sc-eQTL 5.22e-01 -0.0323 0.0502 0.275 NK L1
ENSG00000245904 AC025164.1 -421067 sc-eQTL 6.93e-01 -0.0276 0.0698 0.275 NK L1
ENSG00000257242 LINC01619 -418408 sc-eQTL 1.98e-02 0.161 0.0686 0.275 NK L1
ENSG00000133639 BTG1 -421340 sc-eQTL 4.69e-01 0.0298 0.0411 0.274 Other_T L1
ENSG00000245904 AC025164.1 -421067 sc-eQTL 5.33e-01 -0.0542 0.0869 0.274 Other_T L1
ENSG00000257242 LINC01619 -418408 sc-eQTL 1.22e-02 0.204 0.0806 0.274 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -421340 sc-eQTL 1.86e-01 -0.0744 0.0561 0.268 B_Activated L2
ENSG00000187510 C12orf74 -978337 sc-eQTL 5.86e-01 -0.0543 0.0994 0.268 B_Activated L2
ENSG00000205056 LINC02397 -741945 sc-eQTL 6.50e-01 0.047 0.103 0.268 B_Activated L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 8.57e-01 -0.0198 0.11 0.268 B_Activated L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 9.88e-01 -0.00127 0.0855 0.268 B_Activated L2
ENSG00000277851 LINC02391 -639326 sc-eQTL 7.15e-01 0.0335 0.0919 0.268 B_Activated L2
ENSG00000133639 BTG1 -421340 sc-eQTL 4.47e-01 -0.0418 0.0549 0.27 B_Intermediate L2
ENSG00000187510 C12orf74 -978337 sc-eQTL 6.12e-01 0.0483 0.0951 0.27 B_Intermediate L2
ENSG00000205056 LINC02397 -741945 sc-eQTL 9.98e-01 0.000166 0.0704 0.27 B_Intermediate L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 3.64e-01 -0.0701 0.077 0.27 B_Intermediate L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 8.71e-01 -0.0123 0.0757 0.27 B_Intermediate L2
ENSG00000277851 LINC02391 -639326 sc-eQTL 5.08e-01 0.0656 0.099 0.27 B_Intermediate L2
ENSG00000133639 BTG1 -421340 sc-eQTL 8.96e-01 -0.00652 0.0499 0.276 B_Memory L2
ENSG00000187510 C12orf74 -978337 sc-eQTL 4.86e-01 0.0605 0.0868 0.276 B_Memory L2
ENSG00000205056 LINC02397 -741945 sc-eQTL 2.61e-01 -0.0948 0.0841 0.276 B_Memory L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 9.18e-01 -0.00919 0.0887 0.276 B_Memory L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 2.81e-01 -0.0856 0.0792 0.276 B_Memory L2
ENSG00000277851 LINC02391 -639326 sc-eQTL 7.32e-01 -0.0326 0.0952 0.276 B_Memory L2
ENSG00000133639 BTG1 -421340 sc-eQTL 2.97e-01 -0.0527 0.0504 0.274 B_Naive1 L2
ENSG00000187510 C12orf74 -978337 sc-eQTL 9.96e-01 0.000488 0.0892 0.274 B_Naive1 L2
ENSG00000205056 LINC02397 -741945 sc-eQTL 9.78e-01 0.00148 0.0543 0.274 B_Naive1 L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 4.76e-01 0.052 0.073 0.274 B_Naive1 L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 3.02e-01 0.0747 0.0723 0.274 B_Naive1 L2
ENSG00000277851 LINC02391 -639326 sc-eQTL 8.14e-01 -0.0209 0.0891 0.274 B_Naive1 L2
ENSG00000133639 BTG1 -421340 sc-eQTL 5.57e-02 -0.0933 0.0485 0.275 B_Naive2 L2
ENSG00000187510 C12orf74 -978337 sc-eQTL 6.28e-01 0.0345 0.0711 0.275 B_Naive2 L2
ENSG00000205056 LINC02397 -741945 sc-eQTL 1.66e-01 -0.0707 0.0508 0.275 B_Naive2 L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 1.11e-01 -0.128 0.08 0.275 B_Naive2 L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 4.70e-01 -0.0558 0.077 0.275 B_Naive2 L2
ENSG00000277851 LINC02391 -639326 sc-eQTL 4.17e-02 -0.193 0.0944 0.275 B_Naive2 L2
ENSG00000133639 BTG1 -421340 sc-eQTL 6.07e-01 -0.0341 0.0663 0.282 CD4_CTL L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 2.61e-01 -0.117 0.104 0.282 CD4_CTL L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 7.28e-01 -0.0328 0.0941 0.282 CD4_CTL L2
ENSG00000133639 BTG1 -421340 sc-eQTL 8.19e-01 -0.0128 0.0557 0.274 CD4_Naive L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 3.49e-01 -0.0706 0.0752 0.274 CD4_Naive L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 3.58e-01 0.0666 0.0723 0.274 CD4_Naive L2
ENSG00000133639 BTG1 -421340 sc-eQTL 2.17e-01 -0.0659 0.0532 0.274 CD4_TCM L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 6.73e-02 -0.146 0.0795 0.274 CD4_TCM L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 4.22e-02 0.14 0.0684 0.274 CD4_TCM L2
ENSG00000133639 BTG1 -421340 sc-eQTL 6.42e-01 -0.0305 0.0655 0.274 CD4_TEM L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 3.31e-02 -0.204 0.0951 0.274 CD4_TEM L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 1.54e-01 0.132 0.0919 0.274 CD4_TEM L2
ENSG00000133639 BTG1 -421340 sc-eQTL 8.17e-01 -0.0127 0.0549 0.274 CD8_CTL L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 6.50e-02 -0.166 0.0894 0.274 CD8_CTL L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 5.77e-01 -0.0455 0.0813 0.274 CD8_CTL L2
ENSG00000133639 BTG1 -421340 sc-eQTL 9.03e-01 0.0085 0.0694 0.274 CD8_Naive L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 6.23e-01 -0.0424 0.0861 0.274 CD8_Naive L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 3.30e-01 0.0853 0.0873 0.274 CD8_Naive L2
ENSG00000133639 BTG1 -421340 sc-eQTL 9.15e-01 -0.00784 0.073 0.282 CD8_TCM L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 5.48e-01 -0.0606 0.101 0.282 CD8_TCM L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 2.51e-01 0.115 0.1 0.282 CD8_TCM L2
ENSG00000133639 BTG1 -421340 sc-eQTL 5.78e-01 0.0405 0.0726 0.269 CD8_TEM L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 8.24e-02 -0.187 0.107 0.269 CD8_TEM L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 6.72e-02 0.182 0.0987 0.269 CD8_TEM L2
ENSG00000133639 BTG1 -421340 sc-eQTL 3.19e-01 0.0623 0.0623 0.273 MAIT L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 4.64e-01 -0.069 0.0941 0.273 MAIT L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 7.83e-02 0.16 0.0904 0.273 MAIT L2
ENSG00000133639 BTG1 -421340 sc-eQTL 8.48e-01 -0.0127 0.0664 0.273 NK_CD56bright L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 4.35e-01 0.0734 0.0937 0.273 NK_CD56bright L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 4.48e-01 0.0734 0.0966 0.273 NK_CD56bright L2
ENSG00000133639 BTG1 -421340 sc-eQTL 2.88e-01 -0.0542 0.0509 0.274 NK_CD56dim L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 4.51e-01 -0.0646 0.0855 0.274 NK_CD56dim L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 4.08e-01 0.066 0.0796 0.274 NK_CD56dim L2
ENSG00000133639 BTG1 -421340 sc-eQTL 4.93e-01 -0.046 0.067 0.283 NK_HLA L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 7.96e-01 0.0267 0.103 0.283 NK_HLA L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 5.01e-01 0.0613 0.091 0.283 NK_HLA L2
ENSG00000133639 BTG1 -421340 sc-eQTL 6.44e-01 -0.0247 0.0534 0.274 NK_cytokine L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 7.74e-01 -0.0229 0.0796 0.274 NK_cytokine L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 3.44e-01 0.0765 0.0806 0.274 NK_cytokine L2
ENSG00000133639 BTG1 -421340 sc-eQTL 9.76e-01 -0.00179 0.0606 0.259 PB L2
ENSG00000187510 C12orf74 -978337 sc-eQTL 8.95e-01 0.0162 0.122 0.259 PB L2
ENSG00000205056 LINC02397 -741945 sc-eQTL 2.43e-01 0.11 0.094 0.259 PB L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 6.26e-01 0.0512 0.105 0.259 PB L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 8.60e-01 0.0203 0.114 0.259 PB L2
ENSG00000277851 LINC02391 -639326 sc-eQTL 2.04e-01 0.147 0.115 0.259 PB L2
ENSG00000133639 BTG1 -421340 sc-eQTL 1.31e-01 0.0645 0.0426 0.272 Pro_T L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 9.11e-01 0.0107 0.0959 0.272 Pro_T L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 6.63e-01 0.0388 0.089 0.272 Pro_T L2
ENSG00000133639 BTG1 -421340 sc-eQTL 5.68e-01 -0.0425 0.0742 0.274 Treg L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 6.25e-01 -0.0455 0.093 0.274 Treg L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 4.51e-01 -0.0773 0.102 0.274 Treg L2
ENSG00000133639 BTG1 -421340 sc-eQTL 8.92e-01 -0.0113 0.0832 0.271 cDC L2
ENSG00000205056 LINC02397 -741945 sc-eQTL 2.70e-01 0.0726 0.0656 0.271 cDC L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 7.28e-01 -0.0373 0.107 0.271 cDC L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 9.81e-01 -0.00239 0.0998 0.271 cDC L2
ENSG00000277851 LINC02391 -639326 sc-eQTL 8.09e-01 0.0235 0.0968 0.271 cDC L2
ENSG00000133639 BTG1 -421340 sc-eQTL 1.04e-01 -0.0787 0.0482 0.274 cMono_IL1B L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 4.07e-02 -0.155 0.0755 0.274 cMono_IL1B L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 9.48e-01 0.00609 0.0933 0.274 cMono_IL1B L2
ENSG00000133639 BTG1 -421340 sc-eQTL 5.95e-01 -0.0295 0.0554 0.274 cMono_S100A L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 1.00e-02 -0.205 0.0789 0.274 cMono_S100A L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 5.73e-01 -0.0546 0.0966 0.274 cMono_S100A L2
ENSG00000133639 BTG1 -421340 sc-eQTL 1.63e-01 -0.0943 0.0673 0.285 gdT L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 6.83e-01 0.0446 0.109 0.285 gdT L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 3.21e-01 0.114 0.115 0.285 gdT L2
ENSG00000133639 BTG1 -421340 sc-eQTL 2.09e-01 0.0712 0.0565 0.276 intMono L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 6.06e-01 0.0465 0.0898 0.276 intMono L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 8.06e-01 -0.0229 0.0932 0.276 intMono L2
ENSG00000133639 BTG1 -421340 sc-eQTL 5.21e-01 -0.0348 0.0541 0.281 ncMono L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 1.37e-01 -0.128 0.0855 0.281 ncMono L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 7.42e-02 -0.161 0.0899 0.281 ncMono L2
ENSG00000133639 BTG1 -421340 sc-eQTL 3.58e-01 -0.104 0.112 0.274 pDC L2
ENSG00000205056 LINC02397 -741945 sc-eQTL 8.51e-01 0.0196 0.104 0.274 pDC L2
ENSG00000245904 AC025164.1 -421067 sc-eQTL 1.42e-01 -0.155 0.105 0.274 pDC L2
ENSG00000257242 LINC01619 -418408 sc-eQTL 5.01e-01 0.0664 0.0984 0.274 pDC L2
ENSG00000277851 LINC02391 -639326 sc-eQTL 3.55e-01 0.0779 0.0839 0.274 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -421340 sc-eQTL 6.98e-01 -0.0184 0.0473 0.274 B_Memory LOneK1K
ENSG00000187510 C12orf74 -978337 sc-eQTL 6.57e-01 0.0336 0.0755 0.274 B_Memory LOneK1K
ENSG00000205056 LINC02397 -741945 sc-eQTL 7.97e-01 -0.0171 0.0664 0.274 B_Memory LOneK1K
ENSG00000245904 AC025164.1 -421067 sc-eQTL 3.71e-01 -0.0617 0.0688 0.274 B_Memory LOneK1K
ENSG00000257242 LINC01619 -418408 sc-eQTL 3.51e-01 -0.0617 0.0659 0.274 B_Memory LOneK1K
ENSG00000277851 LINC02391 -639326 sc-eQTL 4.92e-01 0.0691 0.1 0.274 B_Memory LOneK1K
ENSG00000133639 BTG1 -421340 sc-eQTL 3.14e-01 -0.045 0.0446 0.274 B_Naive LOneK1K
ENSG00000187510 C12orf74 -978337 sc-eQTL 7.87e-01 -0.025 0.0926 0.274 B_Naive LOneK1K
ENSG00000205056 LINC02397 -741945 sc-eQTL 3.07e-01 -0.0451 0.044 0.274 B_Naive LOneK1K
ENSG00000245904 AC025164.1 -421067 sc-eQTL 6.52e-01 -0.0304 0.0673 0.274 B_Naive LOneK1K
ENSG00000257242 LINC01619 -418408 sc-eQTL 7.12e-01 0.0242 0.0655 0.274 B_Naive LOneK1K
ENSG00000277851 LINC02391 -639326 sc-eQTL 2.17e-01 -0.11 0.0886 0.274 B_Naive LOneK1K
ENSG00000133639 BTG1 -421340 sc-eQTL 1.20e-01 -0.0715 0.0458 0.274 CD14_Mono LOneK1K
ENSG00000245904 AC025164.1 -421067 sc-eQTL 2.95e-02 -0.158 0.0721 0.274 CD14_Mono LOneK1K
ENSG00000257242 LINC01619 -418408 sc-eQTL 8.15e-01 -0.0212 0.0907 0.274 CD14_Mono LOneK1K
ENSG00000133639 BTG1 -421340 sc-eQTL 8.08e-01 -0.0112 0.0461 0.276 CD16_Mono LOneK1K
ENSG00000245904 AC025164.1 -421067 sc-eQTL 5.23e-01 -0.0512 0.08 0.276 CD16_Mono LOneK1K
ENSG00000257242 LINC01619 -418408 sc-eQTL 1.54e-01 -0.135 0.0944 0.276 CD16_Mono LOneK1K
ENSG00000133639 BTG1 -421340 sc-eQTL 6.07e-01 -0.0246 0.0478 0.274 NK_CD56dim LOneK1K
ENSG00000245904 AC025164.1 -421067 sc-eQTL 6.00e-01 -0.0374 0.0711 0.274 NK_CD56dim LOneK1K
ENSG00000257242 LINC01619 -418408 sc-eQTL 8.38e-02 0.121 0.0695 0.274 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000205056 \N -741945 2.67e-07 1.27e-07 4.69e-08 1.9e-07 9.24e-08 9.9e-08 1.61e-07 5.53e-08 1.45e-07 5.67e-08 1.57e-07 9.19e-08 1.53e-07 7.13e-08 5.91e-08 7.5e-08 4.09e-08 1.33e-07 5.97e-08 4.23e-08 1.21e-07 1.24e-07 1.44e-07 2.64e-08 1.63e-07 1.25e-07 1.07e-07 9.74e-08 1.2e-07 1e-07 1.06e-07 3.65e-08 3.56e-08 8.23e-08 6.67e-08 3.49e-08 5.45e-08 9.3e-08 6.71e-08 3.92e-08 5.42e-08 1.46e-07 5.27e-08 1.17e-08 4.7e-08 1.84e-08 1.22e-07 3.81e-09 4.88e-08