logo

Genes within 1Mb (chr12:91626998:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -518848 sc-eQTL 7.69e-01 0.0186 0.0632 0.91 B L1
ENSG00000205056 LINC02397 -839453 sc-eQTL 6.04e-01 0.031 0.0597 0.91 B L1
ENSG00000245904 AC025164.1 -518575 sc-eQTL 3.50e-01 0.0803 0.0857 0.91 B L1
ENSG00000257242 LINC01619 -515916 sc-eQTL 1.19e-01 -0.126 0.0806 0.91 B L1
ENSG00000277851 LINC02391 -736834 sc-eQTL 6.87e-01 0.0477 0.118 0.91 B L1
ENSG00000133639 BTG1 -518848 sc-eQTL 1.60e-01 -0.112 0.0795 0.91 CD4T L1
ENSG00000245904 AC025164.1 -518575 sc-eQTL 8.49e-01 -0.0208 0.109 0.91 CD4T L1
ENSG00000257242 LINC01619 -515916 sc-eQTL 6.07e-01 -0.0525 0.102 0.91 CD4T L1
ENSG00000133639 BTG1 -518848 sc-eQTL 4.77e-01 -0.0552 0.0774 0.91 CD8T L1
ENSG00000245904 AC025164.1 -518575 sc-eQTL 7.29e-01 0.035 0.101 0.91 CD8T L1
ENSG00000257242 LINC01619 -515916 sc-eQTL 4.44e-01 0.0798 0.104 0.91 CD8T L1
ENSG00000133639 BTG1 -518848 sc-eQTL 9.10e-01 0.0148 0.131 0.914 DC L1
ENSG00000205056 LINC02397 -839453 sc-eQTL 6.75e-01 -0.0522 0.124 0.914 DC L1
ENSG00000245904 AC025164.1 -518575 sc-eQTL 8.58e-01 0.0253 0.142 0.914 DC L1
ENSG00000257242 LINC01619 -515916 sc-eQTL 5.76e-01 -0.0758 0.135 0.914 DC L1
ENSG00000277851 LINC02391 -736834 sc-eQTL 1.48e-01 0.185 0.128 0.914 DC L1
ENSG00000133639 BTG1 -518848 sc-eQTL 8.70e-01 -0.0101 0.0617 0.91 Mono L1
ENSG00000245904 AC025164.1 -518575 sc-eQTL 3.02e-01 -0.104 0.1 0.91 Mono L1
ENSG00000257242 LINC01619 -515916 sc-eQTL 6.64e-01 -0.0536 0.123 0.91 Mono L1
ENSG00000133639 BTG1 -518848 sc-eQTL 5.45e-01 -0.0436 0.0719 0.91 NK L1
ENSG00000245904 AC025164.1 -518575 sc-eQTL 8.52e-01 -0.0187 0.1 0.91 NK L1
ENSG00000257242 LINC01619 -515916 sc-eQTL 9.53e-01 0.00588 0.0994 0.91 NK L1
ENSG00000133639 BTG1 -518848 sc-eQTL 7.39e-01 -0.0199 0.0597 0.91 Other_T L1
ENSG00000245904 AC025164.1 -518575 sc-eQTL 7.47e-01 0.0407 0.126 0.91 Other_T L1
ENSG00000257242 LINC01619 -515916 sc-eQTL 6.56e-01 -0.053 0.119 0.91 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -518848 sc-eQTL 8.50e-01 0.0151 0.08 0.903 B_Activated L2
ENSG00000205056 LINC02397 -839453 sc-eQTL 3.32e-01 0.143 0.146 0.903 B_Activated L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 5.09e-01 0.103 0.156 0.903 B_Activated L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 7.61e-01 0.037 0.121 0.903 B_Activated L2
ENSG00000277851 LINC02391 -736834 sc-eQTL 3.39e-01 0.125 0.13 0.903 B_Activated L2
ENSG00000133639 BTG1 -518848 sc-eQTL 5.97e-01 -0.0409 0.0773 0.91 B_Intermediate L2
ENSG00000205056 LINC02397 -839453 sc-eQTL 7.96e-01 0.0256 0.0989 0.91 B_Intermediate L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 7.96e-01 -0.0281 0.108 0.91 B_Intermediate L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 8.63e-01 -0.0184 0.106 0.91 B_Intermediate L2
ENSG00000277851 LINC02391 -736834 sc-eQTL 6.55e-01 0.0623 0.139 0.91 B_Intermediate L2
ENSG00000133639 BTG1 -518848 sc-eQTL 1.33e-01 -0.106 0.0701 0.909 B_Memory L2
ENSG00000205056 LINC02397 -839453 sc-eQTL 2.33e-01 0.142 0.119 0.909 B_Memory L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 2.87e-01 -0.133 0.125 0.909 B_Memory L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 1.63e-01 -0.156 0.112 0.909 B_Memory L2
ENSG00000277851 LINC02391 -736834 sc-eQTL 8.44e-01 -0.0264 0.134 0.909 B_Memory L2
ENSG00000133639 BTG1 -518848 sc-eQTL 4.40e-01 -0.056 0.0724 0.91 B_Naive1 L2
ENSG00000205056 LINC02397 -839453 sc-eQTL 6.13e-01 0.0395 0.0779 0.91 B_Naive1 L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 4.87e-01 -0.0729 0.105 0.91 B_Naive1 L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 2.42e-01 -0.121 0.104 0.91 B_Naive1 L2
ENSG00000277851 LINC02391 -736834 sc-eQTL 3.94e-01 0.109 0.128 0.91 B_Naive1 L2
ENSG00000133639 BTG1 -518848 sc-eQTL 8.68e-01 0.0117 0.07 0.91 B_Naive2 L2
ENSG00000205056 LINC02397 -839453 sc-eQTL 3.90e-01 -0.0628 0.0729 0.91 B_Naive2 L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 9.00e-01 -0.0145 0.115 0.91 B_Naive2 L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 2.18e-01 -0.136 0.11 0.91 B_Naive2 L2
ENSG00000277851 LINC02391 -736834 sc-eQTL 9.44e-01 -0.00955 0.136 0.91 B_Naive2 L2
ENSG00000133639 BTG1 -518848 sc-eQTL 4.89e-01 0.0691 0.0996 0.911 CD4_CTL L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 8.52e-01 -0.0293 0.156 0.911 CD4_CTL L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 2.25e-02 -0.321 0.139 0.911 CD4_CTL L2
ENSG00000133639 BTG1 -518848 sc-eQTL 2.25e-01 -0.0981 0.0807 0.91 CD4_Naive L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 5.29e-01 -0.0691 0.11 0.91 CD4_Naive L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 8.98e-01 -0.0135 0.105 0.91 CD4_Naive L2
ENSG00000133639 BTG1 -518848 sc-eQTL 1.63e-01 -0.107 0.0765 0.91 CD4_TCM L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 5.74e-01 0.0648 0.115 0.91 CD4_TCM L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 9.70e-01 0.0038 0.0993 0.91 CD4_TCM L2
ENSG00000133639 BTG1 -518848 sc-eQTL 3.83e-01 -0.0833 0.0953 0.91 CD4_TEM L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 3.47e-01 0.132 0.14 0.91 CD4_TEM L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 4.99e-01 -0.091 0.134 0.91 CD4_TEM L2
ENSG00000133639 BTG1 -518848 sc-eQTL 5.16e-02 -0.153 0.0781 0.91 CD8_CTL L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 5.17e-01 0.0838 0.129 0.91 CD8_CTL L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 7.13e-01 -0.043 0.117 0.91 CD8_CTL L2
ENSG00000133639 BTG1 -518848 sc-eQTL 4.89e-01 -0.0698 0.101 0.91 CD8_Naive L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 7.05e-02 -0.225 0.124 0.91 CD8_Naive L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 3.18e-01 0.127 0.127 0.91 CD8_Naive L2
ENSG00000133639 BTG1 -518848 sc-eQTL 7.68e-01 -0.0313 0.106 0.91 CD8_TCM L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 2.41e-01 0.171 0.145 0.91 CD8_TCM L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 3.42e-01 -0.138 0.145 0.91 CD8_TCM L2
ENSG00000133639 BTG1 -518848 sc-eQTL 4.06e-01 -0.089 0.107 0.909 CD8_TEM L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 3.35e-01 0.153 0.158 0.909 CD8_TEM L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 5.43e-01 -0.0893 0.146 0.909 CD8_TEM L2
ENSG00000133639 BTG1 -518848 sc-eQTL 8.37e-01 -0.0188 0.0913 0.911 MAIT L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 8.81e-01 -0.0206 0.138 0.911 MAIT L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 3.65e-01 0.12 0.133 0.911 MAIT L2
ENSG00000133639 BTG1 -518848 sc-eQTL 6.37e-01 -0.0445 0.0941 0.907 NK_CD56bright L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 3.33e-01 -0.129 0.133 0.907 NK_CD56bright L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 1.77e-01 -0.185 0.137 0.907 NK_CD56bright L2
ENSG00000133639 BTG1 -518848 sc-eQTL 5.34e-01 -0.0455 0.073 0.909 NK_CD56dim L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 7.33e-01 0.0419 0.123 0.909 NK_CD56dim L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 7.71e-01 -0.0333 0.114 0.909 NK_CD56dim L2
ENSG00000133639 BTG1 -518848 sc-eQTL 2.24e-01 -0.118 0.0971 0.913 NK_HLA L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 2.79e-01 -0.162 0.15 0.913 NK_HLA L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 9.69e-01 -0.00508 0.132 0.913 NK_HLA L2
ENSG00000133639 BTG1 -518848 sc-eQTL 6.44e-02 -0.14 0.0751 0.909 NK_cytokine L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 1.18e-01 -0.176 0.112 0.909 NK_cytokine L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 1.56e-01 0.162 0.114 0.909 NK_cytokine L2
ENSG00000133639 BTG1 -518848 sc-eQTL 1.78e-01 -0.118 0.087 0.904 PB L2
ENSG00000205056 LINC02397 -839453 sc-eQTL 3.45e-02 -0.287 0.134 0.904 PB L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 9.49e-01 -0.00972 0.152 0.904 PB L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 5.62e-01 0.0963 0.165 0.904 PB L2
ENSG00000277851 LINC02391 -736834 sc-eQTL 1.37e-01 0.248 0.166 0.904 PB L2
ENSG00000133639 BTG1 -518848 sc-eQTL 2.53e-01 -0.069 0.0602 0.909 Pro_T L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 8.98e-01 0.0173 0.135 0.909 Pro_T L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 2.71e-01 0.138 0.125 0.909 Pro_T L2
ENSG00000133639 BTG1 -518848 sc-eQTL 6.58e-02 -0.196 0.106 0.91 Treg L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 6.03e-01 0.0696 0.134 0.91 Treg L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 4.30e-01 -0.116 0.147 0.91 Treg L2
ENSG00000133639 BTG1 -518848 sc-eQTL 5.30e-01 -0.072 0.114 0.91 cDC L2
ENSG00000205056 LINC02397 -839453 sc-eQTL 4.27e-01 0.0719 0.0904 0.91 cDC L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 7.66e-01 -0.044 0.147 0.91 cDC L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 1.62e-01 -0.192 0.137 0.91 cDC L2
ENSG00000277851 LINC02391 -736834 sc-eQTL 1.43e-01 0.195 0.132 0.91 cDC L2
ENSG00000133639 BTG1 -518848 sc-eQTL 5.84e-01 0.0381 0.0695 0.91 cMono_IL1B L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 8.83e-01 -0.0161 0.109 0.91 cMono_IL1B L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 1.04e-01 -0.217 0.133 0.91 cMono_IL1B L2
ENSG00000133639 BTG1 -518848 sc-eQTL 8.07e-01 -0.0195 0.0798 0.91 cMono_S100A L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 1.54e-01 -0.164 0.115 0.91 cMono_S100A L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 1.31e-01 0.21 0.138 0.91 cMono_S100A L2
ENSG00000133639 BTG1 -518848 sc-eQTL 1.52e-01 -0.137 0.095 0.912 gdT L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 1.93e-01 -0.201 0.153 0.912 gdT L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 2.04e-01 -0.206 0.161 0.912 gdT L2
ENSG00000133639 BTG1 -518848 sc-eQTL 9.83e-01 -0.00179 0.0833 0.907 intMono L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 3.03e-01 -0.136 0.132 0.907 intMono L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 2.86e-01 0.146 0.137 0.907 intMono L2
ENSG00000133639 BTG1 -518848 sc-eQTL 6.71e-01 0.0332 0.0779 0.907 ncMono L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 9.00e-02 -0.21 0.123 0.907 ncMono L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 8.41e-01 -0.0262 0.131 0.907 ncMono L2
ENSG00000133639 BTG1 -518848 sc-eQTL 5.54e-01 0.0978 0.165 0.921 pDC L2
ENSG00000205056 LINC02397 -839453 sc-eQTL 2.87e-01 -0.162 0.152 0.921 pDC L2
ENSG00000245904 AC025164.1 -518575 sc-eQTL 4.47e-01 0.118 0.155 0.921 pDC L2
ENSG00000257242 LINC01619 -515916 sc-eQTL 8.80e-01 0.022 0.145 0.921 pDC L2
ENSG00000277851 LINC02391 -736834 sc-eQTL 4.15e-01 0.101 0.123 0.921 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -518848 sc-eQTL 8.93e-01 0.00894 0.0667 0.91 B_Memory LOneK1K
ENSG00000205056 LINC02397 -839453 sc-eQTL 1.50e-01 0.135 0.0931 0.91 B_Memory LOneK1K
ENSG00000245904 AC025164.1 -518575 sc-eQTL 9.81e-01 -0.00229 0.0972 0.91 B_Memory LOneK1K
ENSG00000257242 LINC01619 -515916 sc-eQTL 2.10e-01 -0.117 0.0927 0.91 B_Memory LOneK1K
ENSG00000277851 LINC02391 -736834 sc-eQTL 8.47e-01 0.0274 0.142 0.91 B_Memory LOneK1K
ENSG00000133639 BTG1 -518848 sc-eQTL 6.57e-01 -0.0284 0.0637 0.91 B_Naive LOneK1K
ENSG00000205056 LINC02397 -839453 sc-eQTL 7.69e-01 0.0185 0.0629 0.91 B_Naive LOneK1K
ENSG00000245904 AC025164.1 -518575 sc-eQTL 8.69e-01 -0.0158 0.0961 0.91 B_Naive LOneK1K
ENSG00000257242 LINC01619 -515916 sc-eQTL 4.94e-02 -0.183 0.0927 0.91 B_Naive LOneK1K
ENSG00000277851 LINC02391 -736834 sc-eQTL 5.53e-01 0.0753 0.127 0.91 B_Naive LOneK1K
ENSG00000133639 BTG1 -518848 sc-eQTL 8.06e-01 0.0162 0.066 0.91 CD14_Mono LOneK1K
ENSG00000245904 AC025164.1 -518575 sc-eQTL 3.64e-01 -0.0947 0.104 0.91 CD14_Mono LOneK1K
ENSG00000257242 LINC01619 -515916 sc-eQTL 5.43e-01 -0.0791 0.13 0.91 CD14_Mono LOneK1K
ENSG00000133639 BTG1 -518848 sc-eQTL 2.02e-01 0.0853 0.0666 0.909 CD16_Mono LOneK1K
ENSG00000245904 AC025164.1 -518575 sc-eQTL 2.03e-02 -0.268 0.115 0.909 CD16_Mono LOneK1K
ENSG00000257242 LINC01619 -515916 sc-eQTL 7.97e-01 0.0354 0.137 0.909 CD16_Mono LOneK1K
ENSG00000133639 BTG1 -518848 sc-eQTL 3.70e-01 -0.0614 0.0683 0.909 NK_CD56dim LOneK1K
ENSG00000245904 AC025164.1 -518575 sc-eQTL 8.74e-01 -0.0162 0.102 0.909 NK_CD56dim LOneK1K
ENSG00000257242 LINC01619 -515916 sc-eQTL 3.49e-01 0.0939 0.1 0.909 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000257242 LINC01619 -515916 eQTL 0.0174 0.0575 0.0241 0.0 0.0 0.0937

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000257242 LINC01619 -515916 6.33e-07 3.12e-07 9.49e-08 2.58e-07 1.07e-07 1.54e-07 4.05e-07 9.26e-08 2.75e-07 1.78e-07 3.66e-07 2.55e-07 4.88e-07 9.18e-08 1.26e-07 1.75e-07 1.38e-07 3.12e-07 1.51e-07 8.25e-08 1.57e-07 2.63e-07 2.63e-07 1.13e-07 4.46e-07 2.29e-07 1.87e-07 1.85e-07 2.4e-07 3.3e-07 1.93e-07 7.91e-08 5.75e-08 1.15e-07 1.76e-07 5.7e-08 7.52e-08 6.46e-08 5.89e-08 7.5e-08 3.6e-08 2.9e-07 1.6e-08 1.56e-08 9.64e-08 9.49e-09 9.98e-08 2.85e-09 5.35e-08