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Genes within 1Mb (chr12:91552054:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -593792 sc-eQTL 2.75e-01 0.0444 0.0405 0.41 B L1
ENSG00000205056 LINC02397 -914397 sc-eQTL 3.59e-01 -0.0352 0.0383 0.41 B L1
ENSG00000245904 AC025164.1 -593519 sc-eQTL 1.92e-01 0.0719 0.055 0.41 B L1
ENSG00000257242 LINC01619 -590860 sc-eQTL 8.26e-01 -0.0115 0.0521 0.41 B L1
ENSG00000277851 LINC02391 -811778 sc-eQTL 5.48e-01 0.0458 0.0759 0.41 B L1
ENSG00000133639 BTG1 -593792 sc-eQTL 6.80e-01 0.0211 0.051 0.41 CD4T L1
ENSG00000245904 AC025164.1 -593519 sc-eQTL 5.12e-01 0.0458 0.0697 0.41 CD4T L1
ENSG00000257242 LINC01619 -590860 sc-eQTL 7.49e-01 -0.0209 0.0651 0.41 CD4T L1
ENSG00000133639 BTG1 -593792 sc-eQTL 9.84e-01 0.000972 0.0489 0.41 CD8T L1
ENSG00000245904 AC025164.1 -593519 sc-eQTL 9.09e-01 0.0073 0.0637 0.41 CD8T L1
ENSG00000257242 LINC01619 -590860 sc-eQTL 4.07e-01 0.0546 0.0657 0.41 CD8T L1
ENSG00000133639 BTG1 -593792 sc-eQTL 7.12e-03 -0.224 0.0824 0.414 DC L1
ENSG00000205056 LINC02397 -914397 sc-eQTL 9.64e-02 -0.133 0.0795 0.414 DC L1
ENSG00000245904 AC025164.1 -593519 sc-eQTL 4.66e-01 -0.0664 0.0908 0.414 DC L1
ENSG00000257242 LINC01619 -590860 sc-eQTL 5.15e-02 -0.169 0.0863 0.414 DC L1
ENSG00000277851 LINC02391 -811778 sc-eQTL 8.98e-02 0.139 0.0818 0.414 DC L1
ENSG00000133639 BTG1 -593792 sc-eQTL 6.04e-01 -0.0208 0.04 0.41 Mono L1
ENSG00000245904 AC025164.1 -593519 sc-eQTL 6.37e-01 0.0308 0.0652 0.41 Mono L1
ENSG00000257242 LINC01619 -590860 sc-eQTL 4.31e-02 -0.162 0.0794 0.41 Mono L1
ENSG00000133639 BTG1 -593792 sc-eQTL 1.49e-01 0.0656 0.0453 0.412 NK L1
ENSG00000245904 AC025164.1 -593519 sc-eQTL 5.58e-01 0.037 0.0631 0.412 NK L1
ENSG00000257242 LINC01619 -590860 sc-eQTL 1.02e-01 0.102 0.0624 0.412 NK L1
ENSG00000133639 BTG1 -593792 sc-eQTL 3.31e-01 -0.0374 0.0383 0.41 Other_T L1
ENSG00000245904 AC025164.1 -593519 sc-eQTL 2.75e-01 0.0888 0.0811 0.41 Other_T L1
ENSG00000257242 LINC01619 -590860 sc-eQTL 1.89e-01 -0.1 0.0761 0.41 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -593792 sc-eQTL 8.38e-01 -0.0107 0.0525 0.406 B_Activated L2
ENSG00000205056 LINC02397 -914397 sc-eQTL 6.83e-01 -0.0394 0.0963 0.406 B_Activated L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 5.39e-01 -0.0628 0.102 0.406 B_Activated L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 8.08e-01 0.0194 0.0795 0.406 B_Activated L2
ENSG00000277851 LINC02391 -811778 sc-eQTL 5.95e-01 -0.0456 0.0854 0.406 B_Activated L2
ENSG00000133639 BTG1 -593792 sc-eQTL 8.23e-01 0.0111 0.0492 0.41 B_Intermediate L2
ENSG00000205056 LINC02397 -914397 sc-eQTL 9.64e-01 -0.00288 0.063 0.41 B_Intermediate L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 2.25e-01 0.0838 0.0689 0.41 B_Intermediate L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 9.43e-01 0.00489 0.0678 0.41 B_Intermediate L2
ENSG00000277851 LINC02391 -811778 sc-eQTL 5.85e-01 -0.0485 0.0887 0.41 B_Intermediate L2
ENSG00000133639 BTG1 -593792 sc-eQTL 6.57e-01 -0.0201 0.0452 0.407 B_Memory L2
ENSG00000205056 LINC02397 -914397 sc-eQTL 3.81e-01 0.0668 0.0762 0.407 B_Memory L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 5.95e-01 -0.0427 0.0802 0.407 B_Memory L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 2.43e-01 0.0839 0.0716 0.407 B_Memory L2
ENSG00000277851 LINC02391 -811778 sc-eQTL 3.93e-01 0.0735 0.086 0.407 B_Memory L2
ENSG00000133639 BTG1 -593792 sc-eQTL 3.10e-01 0.0475 0.0466 0.41 B_Naive1 L2
ENSG00000205056 LINC02397 -914397 sc-eQTL 7.32e-01 -0.0173 0.0503 0.41 B_Naive1 L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 1.60e-01 0.0948 0.0673 0.41 B_Naive1 L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 9.80e-01 0.00171 0.067 0.41 B_Naive1 L2
ENSG00000277851 LINC02391 -811778 sc-eQTL 7.95e-02 0.144 0.0818 0.41 B_Naive1 L2
ENSG00000133639 BTG1 -593792 sc-eQTL 5.81e-01 -0.0244 0.0442 0.408 B_Naive2 L2
ENSG00000205056 LINC02397 -914397 sc-eQTL 2.10e-01 -0.0578 0.0459 0.408 B_Naive2 L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 2.54e-01 0.0829 0.0725 0.408 B_Naive2 L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 6.03e-01 -0.0362 0.0696 0.408 B_Naive2 L2
ENSG00000277851 LINC02391 -811778 sc-eQTL 6.82e-01 -0.0353 0.0861 0.408 B_Naive2 L2
ENSG00000133639 BTG1 -593792 sc-eQTL 3.64e-01 -0.0545 0.0599 0.414 CD4_CTL L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 9.75e-01 0.00292 0.0942 0.414 CD4_CTL L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 5.07e-01 -0.0565 0.085 0.414 CD4_CTL L2
ENSG00000133639 BTG1 -593792 sc-eQTL 8.86e-01 -0.00745 0.0517 0.41 CD4_Naive L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 5.54e-01 0.0415 0.07 0.41 CD4_Naive L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 6.91e-01 -0.0268 0.0673 0.41 CD4_Naive L2
ENSG00000133639 BTG1 -593792 sc-eQTL 4.55e-01 0.0367 0.0491 0.41 CD4_TCM L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 3.77e-01 0.0652 0.0736 0.41 CD4_TCM L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 7.54e-01 0.0199 0.0635 0.41 CD4_TCM L2
ENSG00000133639 BTG1 -593792 sc-eQTL 4.60e-01 -0.0446 0.0603 0.41 CD4_TEM L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 1.73e-01 0.121 0.0882 0.41 CD4_TEM L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 6.42e-01 -0.0396 0.085 0.41 CD4_TEM L2
ENSG00000133639 BTG1 -593792 sc-eQTL 1.97e-01 -0.0633 0.049 0.41 CD8_CTL L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 1.28e-01 0.123 0.0803 0.41 CD8_CTL L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 2.37e-01 0.0862 0.0726 0.41 CD8_CTL L2
ENSG00000133639 BTG1 -593792 sc-eQTL 8.92e-01 0.0085 0.0624 0.41 CD8_Naive L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 6.15e-01 -0.039 0.0773 0.41 CD8_Naive L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 7.35e-01 0.0267 0.0786 0.41 CD8_Naive L2
ENSG00000133639 BTG1 -593792 sc-eQTL 4.56e-01 0.0499 0.0668 0.407 CD8_TCM L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 3.46e-01 0.087 0.092 0.407 CD8_TCM L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 7.18e-01 -0.0333 0.0921 0.407 CD8_TCM L2
ENSG00000133639 BTG1 -593792 sc-eQTL 7.51e-01 -0.0205 0.0646 0.406 CD8_TEM L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 7.87e-01 0.0259 0.0957 0.406 CD8_TEM L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 1.58e-01 -0.125 0.088 0.406 CD8_TEM L2
ENSG00000133639 BTG1 -593792 sc-eQTL 2.33e-01 -0.0692 0.0579 0.409 MAIT L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 6.73e-01 0.037 0.0876 0.409 MAIT L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 4.20e-01 -0.0682 0.0845 0.409 MAIT L2
ENSG00000133639 BTG1 -593792 sc-eQTL 5.38e-01 -0.0376 0.0608 0.416 NK_CD56bright L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 4.45e-01 -0.0658 0.086 0.416 NK_CD56bright L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 6.00e-01 -0.0465 0.0887 0.416 NK_CD56bright L2
ENSG00000133639 BTG1 -593792 sc-eQTL 3.59e-01 0.0426 0.0464 0.412 NK_CD56dim L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 3.26e-01 0.0766 0.0779 0.412 NK_CD56dim L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 2.07e-01 0.0917 0.0724 0.412 NK_CD56dim L2
ENSG00000133639 BTG1 -593792 sc-eQTL 7.37e-01 0.0207 0.0615 0.42 NK_HLA L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 8.18e-01 0.0218 0.0945 0.42 NK_HLA L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 5.38e-01 0.0514 0.0834 0.42 NK_HLA L2
ENSG00000133639 BTG1 -593792 sc-eQTL 6.87e-01 0.0196 0.0485 0.412 NK_cytokine L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 5.96e-01 0.0383 0.0723 0.412 NK_cytokine L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 1.30e-01 0.111 0.073 0.412 NK_cytokine L2
ENSG00000133639 BTG1 -593792 sc-eQTL 5.27e-01 -0.0355 0.056 0.411 PB L2
ENSG00000205056 LINC02397 -914397 sc-eQTL 3.68e-01 -0.0788 0.0872 0.411 PB L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 6.07e-01 -0.05 0.097 0.411 PB L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 9.07e-01 0.0124 0.106 0.411 PB L2
ENSG00000277851 LINC02391 -811778 sc-eQTL 3.27e-01 -0.105 0.107 0.411 PB L2
ENSG00000133639 BTG1 -593792 sc-eQTL 8.50e-01 -0.00744 0.0394 0.411 Pro_T L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 7.58e-01 0.0272 0.0881 0.411 Pro_T L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 1.44e-01 -0.119 0.0814 0.411 Pro_T L2
ENSG00000133639 BTG1 -593792 sc-eQTL 2.83e-01 -0.0706 0.0656 0.41 Treg L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 2.62e-01 -0.0923 0.0821 0.41 Treg L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 1.98e-01 -0.117 0.0904 0.41 Treg L2
ENSG00000133639 BTG1 -593792 sc-eQTL 6.34e-03 -0.201 0.0728 0.42 cDC L2
ENSG00000205056 LINC02397 -914397 sc-eQTL 1.25e-01 -0.09 0.0584 0.42 cDC L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 3.62e-01 -0.0872 0.0955 0.42 cDC L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 2.02e-02 -0.206 0.0879 0.42 cDC L2
ENSG00000277851 LINC02391 -811778 sc-eQTL 2.47e-01 0.1 0.0861 0.42 cDC L2
ENSG00000133639 BTG1 -593792 sc-eQTL 5.20e-01 -0.0288 0.0447 0.41 cMono_IL1B L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 5.12e-01 0.0462 0.0703 0.41 cMono_IL1B L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 4.07e-03 -0.245 0.0844 0.41 cMono_IL1B L2
ENSG00000133639 BTG1 -593792 sc-eQTL 3.93e-01 -0.044 0.0515 0.41 cMono_S100A L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 5.20e-01 -0.0479 0.0744 0.41 cMono_S100A L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 5.99e-01 -0.0473 0.0898 0.41 cMono_S100A L2
ENSG00000133639 BTG1 -593792 sc-eQTL 7.81e-01 -0.0178 0.064 0.415 gdT L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 3.66e-01 -0.0934 0.103 0.415 gdT L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 2.41e-01 -0.127 0.108 0.415 gdT L2
ENSG00000133639 BTG1 -593792 sc-eQTL 3.63e-01 -0.048 0.0526 0.409 intMono L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 6.53e-01 0.0376 0.0835 0.409 intMono L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 6.17e-01 -0.0434 0.0866 0.409 intMono L2
ENSG00000133639 BTG1 -593792 sc-eQTL 3.64e-01 -0.0445 0.0489 0.416 ncMono L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 5.61e-01 -0.0454 0.0779 0.416 ncMono L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 2.14e-01 -0.102 0.0818 0.416 ncMono L2
ENSG00000133639 BTG1 -593792 sc-eQTL 5.30e-01 0.0637 0.101 0.429 pDC L2
ENSG00000205056 LINC02397 -914397 sc-eQTL 5.19e-01 -0.0603 0.0934 0.429 pDC L2
ENSG00000245904 AC025164.1 -593519 sc-eQTL 8.72e-01 -0.0153 0.095 0.429 pDC L2
ENSG00000257242 LINC01619 -590860 sc-eQTL 2.09e-02 -0.204 0.0873 0.429 pDC L2
ENSG00000277851 LINC02391 -811778 sc-eQTL 1.70e-02 0.18 0.0744 0.429 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000133639 BTG1 -593792 sc-eQTL 5.04e-01 0.0284 0.0424 0.41 B_Memory LOneK1K
ENSG00000205056 LINC02397 -914397 sc-eQTL 5.43e-01 0.0363 0.0595 0.41 B_Memory LOneK1K
ENSG00000245904 AC025164.1 -593519 sc-eQTL 7.64e-01 0.0186 0.0619 0.41 B_Memory LOneK1K
ENSG00000257242 LINC01619 -590860 sc-eQTL 9.40e-01 0.00448 0.0593 0.41 B_Memory LOneK1K
ENSG00000277851 LINC02391 -811778 sc-eQTL 9.41e-01 -0.00669 0.0902 0.41 B_Memory LOneK1K
ENSG00000133639 BTG1 -593792 sc-eQTL 7.53e-01 0.013 0.0413 0.41 B_Naive LOneK1K
ENSG00000205056 LINC02397 -914397 sc-eQTL 2.63e-01 -0.0456 0.0407 0.41 B_Naive LOneK1K
ENSG00000245904 AC025164.1 -593519 sc-eQTL 1.58e-01 0.0877 0.062 0.41 B_Naive LOneK1K
ENSG00000257242 LINC01619 -590860 sc-eQTL 3.43e-01 -0.0575 0.0605 0.41 B_Naive LOneK1K
ENSG00000277851 LINC02391 -811778 sc-eQTL 1.02e-01 0.134 0.0817 0.41 B_Naive LOneK1K
ENSG00000133639 BTG1 -593792 sc-eQTL 4.45e-01 -0.0325 0.0425 0.41 CD14_Mono LOneK1K
ENSG00000245904 AC025164.1 -593519 sc-eQTL 7.14e-01 0.0247 0.0673 0.41 CD14_Mono LOneK1K
ENSG00000257242 LINC01619 -590860 sc-eQTL 3.82e-03 -0.24 0.0821 0.41 CD14_Mono LOneK1K
ENSG00000133639 BTG1 -593792 sc-eQTL 6.61e-01 -0.0187 0.0424 0.414 CD16_Mono LOneK1K
ENSG00000245904 AC025164.1 -593519 sc-eQTL 9.05e-01 -0.00876 0.0736 0.414 CD16_Mono LOneK1K
ENSG00000257242 LINC01619 -590860 sc-eQTL 6.50e-02 -0.16 0.0865 0.414 CD16_Mono LOneK1K
ENSG00000133639 BTG1 -593792 sc-eQTL 1.12e-01 0.0686 0.043 0.412 NK_CD56dim LOneK1K
ENSG00000245904 AC025164.1 -593519 sc-eQTL 1.83e-01 0.0858 0.0642 0.412 NK_CD56dim LOneK1K
ENSG00000257242 LINC01619 -590860 sc-eQTL 2.03e-02 0.146 0.0626 0.412 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000133639 BTG1 -593792 eQTL 0.0242 0.0365 0.0162 0.0 0.0 0.42

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina