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Genes within 1Mb (chr12:89141475:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070961 ATP2B1 -567825 sc-eQTL 7.44e-01 0.0158 0.0481 0.391 B L1
ENSG00000139318 DUSP6 -211026 sc-eQTL 7.66e-01 0.0194 0.0652 0.391 B L1
ENSG00000139323 POC1B -384572 sc-eQTL 7.80e-01 0.0188 0.0672 0.391 B L1
ENSG00000139324 TMTC3 999179 sc-eQTL 1.25e-01 -0.136 0.0884 0.391 B L1
ENSG00000198707 CEP290 999387 sc-eQTL 7.65e-01 -0.0199 0.0666 0.391 B L1
ENSG00000257594 GALNT4 -383321 sc-eQTL 4.97e-01 -0.0475 0.0699 0.391 B L1
ENSG00000258216 AC009522.1 -570573 sc-eQTL 6.28e-01 -0.0365 0.0751 0.391 B L1
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 7.00e-01 -0.0327 0.0849 0.391 B L1
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 4.21e-01 -0.0513 0.0636 0.391 B L1
ENSG00000070961 ATP2B1 -567825 sc-eQTL 7.27e-02 0.084 0.0466 0.391 CD4T L1
ENSG00000139318 DUSP6 -211026 sc-eQTL 1.59e-01 0.0993 0.0702 0.391 CD4T L1
ENSG00000139323 POC1B -384572 sc-eQTL 2.11e-01 -0.0764 0.0609 0.391 CD4T L1
ENSG00000139324 TMTC3 999179 sc-eQTL 8.01e-01 -0.0164 0.065 0.391 CD4T L1
ENSG00000198707 CEP290 999387 sc-eQTL 9.14e-01 0.00658 0.0609 0.391 CD4T L1
ENSG00000257594 GALNT4 -383321 sc-eQTL 7.49e-01 -0.0217 0.0677 0.391 CD4T L1
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 2.58e-01 0.0874 0.0771 0.391 CD4T L1
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 6.61e-01 0.0315 0.0716 0.391 CD4T L1
ENSG00000070961 ATP2B1 -567825 sc-eQTL 2.14e-01 0.0696 0.0558 0.391 CD8T L1
ENSG00000139318 DUSP6 -211026 sc-eQTL 2.50e-01 0.0759 0.0658 0.391 CD8T L1
ENSG00000139323 POC1B -384572 sc-eQTL 5.94e-01 0.0379 0.071 0.391 CD8T L1
ENSG00000139324 TMTC3 999179 sc-eQTL 1.65e-01 -0.117 0.0841 0.391 CD8T L1
ENSG00000198707 CEP290 999387 sc-eQTL 7.93e-01 -0.0157 0.0598 0.391 CD8T L1
ENSG00000257594 GALNT4 -383321 sc-eQTL 4.47e-01 -0.0558 0.0732 0.391 CD8T L1
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 1.41e-01 0.122 0.0822 0.391 CD8T L1
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 2.39e-01 0.0854 0.0723 0.391 CD8T L1
ENSG00000070961 ATP2B1 -567825 sc-eQTL 9.80e-01 0.00163 0.0638 0.408 DC L1
ENSG00000139318 DUSP6 -211026 sc-eQTL 2.26e-01 -0.0701 0.0577 0.408 DC L1
ENSG00000139323 POC1B -384572 sc-eQTL 7.19e-01 0.0331 0.0922 0.408 DC L1
ENSG00000139324 TMTC3 999179 sc-eQTL 3.35e-01 -0.0798 0.0825 0.408 DC L1
ENSG00000198707 CEP290 999387 sc-eQTL 6.77e-01 -0.0368 0.0882 0.408 DC L1
ENSG00000257594 GALNT4 -383321 sc-eQTL 5.88e-01 -0.0485 0.0894 0.408 DC L1
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 2.62e-01 0.0919 0.0817 0.408 DC L1
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 3.78e-01 -0.0541 0.0612 0.408 DC L1
ENSG00000274021 AC024909.1 -209540 sc-eQTL 7.98e-01 0.0191 0.0746 0.408 DC L1
ENSG00000070961 ATP2B1 -567825 sc-eQTL 5.74e-01 -0.0195 0.0346 0.391 Mono L1
ENSG00000139318 DUSP6 -211026 sc-eQTL 9.21e-03 -0.152 0.0579 0.391 Mono L1
ENSG00000139323 POC1B -384572 sc-eQTL 2.74e-01 -0.0859 0.0783 0.391 Mono L1
ENSG00000198707 CEP290 999387 sc-eQTL 5.11e-01 0.0472 0.0717 0.391 Mono L1
ENSG00000257594 GALNT4 -383321 sc-eQTL 5.09e-01 0.0465 0.0703 0.391 Mono L1
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 4.05e-02 -0.123 0.0596 0.391 Mono L1
ENSG00000274021 AC024909.1 -209540 sc-eQTL 3.35e-02 -0.127 0.0592 0.391 Mono L1
ENSG00000070961 ATP2B1 -567825 sc-eQTL 8.39e-01 -0.0124 0.0612 0.391 NK L1
ENSG00000139318 DUSP6 -211026 sc-eQTL 9.29e-01 -0.00518 0.0578 0.391 NK L1
ENSG00000139323 POC1B -384572 sc-eQTL 2.44e-04 -0.264 0.0708 0.391 NK L1
ENSG00000139324 TMTC3 999179 sc-eQTL 9.60e-01 -0.0043 0.0847 0.391 NK L1
ENSG00000198707 CEP290 999387 sc-eQTL 6.44e-01 -0.0317 0.0685 0.391 NK L1
ENSG00000257594 GALNT4 -383321 sc-eQTL 1.62e-01 0.106 0.0758 0.391 NK L1
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 4.13e-01 0.0703 0.0857 0.391 NK L1
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 9.78e-01 -0.00229 0.0832 0.391 NK L1
ENSG00000274021 AC024909.1 -209540 sc-eQTL 9.32e-01 0.00621 0.0732 0.391 NK L1
ENSG00000070961 ATP2B1 -567825 sc-eQTL 3.97e-01 -0.0632 0.0744 0.391 Other_T L1
ENSG00000139318 DUSP6 -211026 sc-eQTL 7.55e-01 -0.0259 0.0828 0.391 Other_T L1
ENSG00000139323 POC1B -384572 sc-eQTL 1.34e-01 -0.111 0.0741 0.391 Other_T L1
ENSG00000139324 TMTC3 999179 sc-eQTL 6.25e-01 -0.0443 0.0905 0.391 Other_T L1
ENSG00000198707 CEP290 999387 sc-eQTL 2.02e-01 0.101 0.0786 0.391 Other_T L1
ENSG00000257594 GALNT4 -383321 sc-eQTL 2.83e-01 -0.0992 0.0922 0.391 Other_T L1
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 3.46e-01 0.0809 0.0856 0.391 Other_T L1
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 4.40e-01 0.0644 0.0833 0.391 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070961 ATP2B1 -567825 sc-eQTL 1.94e-01 0.117 0.0901 0.408 B_Activated L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 4.46e-01 0.0675 0.0884 0.408 B_Activated L2
ENSG00000139323 POC1B -384572 sc-eQTL 6.40e-01 -0.0483 0.103 0.408 B_Activated L2
ENSG00000139324 TMTC3 999179 sc-eQTL 3.66e-01 -0.0784 0.0864 0.408 B_Activated L2
ENSG00000198707 CEP290 999387 sc-eQTL 7.10e-01 0.0374 0.101 0.408 B_Activated L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 4.08e-01 0.0759 0.0916 0.408 B_Activated L2
ENSG00000258216 AC009522.1 -570573 sc-eQTL 7.04e-01 -0.037 0.097 0.408 B_Activated L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 1.61e-01 0.111 0.0786 0.408 B_Activated L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 5.01e-02 0.209 0.106 0.408 B_Activated L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 9.75e-01 0.00245 0.0789 0.393 B_Intermediate L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 6.67e-01 -0.0362 0.0841 0.393 B_Intermediate L2
ENSG00000139323 POC1B -384572 sc-eQTL 8.39e-01 -0.0181 0.0891 0.393 B_Intermediate L2
ENSG00000139324 TMTC3 999179 sc-eQTL 7.35e-01 -0.0307 0.0903 0.393 B_Intermediate L2
ENSG00000198707 CEP290 999387 sc-eQTL 1.04e-02 -0.21 0.0813 0.393 B_Intermediate L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 1.23e-01 -0.129 0.0833 0.393 B_Intermediate L2
ENSG00000258216 AC009522.1 -570573 sc-eQTL 4.31e-01 -0.0631 0.0799 0.393 B_Intermediate L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 7.85e-01 -0.0255 0.0931 0.393 B_Intermediate L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 1.83e-01 -0.0962 0.0721 0.393 B_Intermediate L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 7.05e-01 -0.0244 0.0643 0.392 B_Memory L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 2.43e-01 0.0966 0.0825 0.392 B_Memory L2
ENSG00000139323 POC1B -384572 sc-eQTL 2.42e-01 -0.101 0.086 0.392 B_Memory L2
ENSG00000139324 TMTC3 999179 sc-eQTL 9.37e-01 0.00698 0.088 0.392 B_Memory L2
ENSG00000198707 CEP290 999387 sc-eQTL 9.23e-01 0.00876 0.0905 0.392 B_Memory L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 2.97e-02 -0.197 0.0899 0.392 B_Memory L2
ENSG00000258216 AC009522.1 -570573 sc-eQTL 4.39e-02 -0.183 0.0905 0.392 B_Memory L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 2.92e-01 -0.0907 0.0857 0.392 B_Memory L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 4.31e-01 -0.0599 0.0759 0.392 B_Memory L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 9.47e-01 -0.00391 0.0588 0.391 B_Naive1 L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 6.40e-01 -0.0334 0.0713 0.391 B_Naive1 L2
ENSG00000139323 POC1B -384572 sc-eQTL 1.77e-01 0.103 0.0757 0.391 B_Naive1 L2
ENSG00000139324 TMTC3 999179 sc-eQTL 4.60e-01 -0.0661 0.0894 0.391 B_Naive1 L2
ENSG00000198707 CEP290 999387 sc-eQTL 3.46e-01 0.0753 0.0798 0.391 B_Naive1 L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 3.74e-01 0.0682 0.0766 0.391 B_Naive1 L2
ENSG00000258216 AC009522.1 -570573 sc-eQTL 9.05e-01 -0.00962 0.0805 0.391 B_Naive1 L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 5.07e-01 0.0561 0.0843 0.391 B_Naive1 L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 2.47e-01 -0.0791 0.0681 0.391 B_Naive1 L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 8.48e-01 -0.0129 0.0676 0.391 B_Naive2 L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 6.92e-01 -0.0335 0.0843 0.391 B_Naive2 L2
ENSG00000139323 POC1B -384572 sc-eQTL 8.24e-01 -0.0192 0.0863 0.391 B_Naive2 L2
ENSG00000139324 TMTC3 999179 sc-eQTL 1.08e-02 -0.234 0.091 0.391 B_Naive2 L2
ENSG00000198707 CEP290 999387 sc-eQTL 5.64e-01 0.0508 0.0879 0.391 B_Naive2 L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 4.39e-01 0.0686 0.0885 0.391 B_Naive2 L2
ENSG00000258216 AC009522.1 -570573 sc-eQTL 5.38e-01 0.056 0.0908 0.391 B_Naive2 L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 1.30e-01 -0.136 0.0891 0.391 B_Naive2 L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 8.11e-01 -0.0204 0.0849 0.391 B_Naive2 L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 3.60e-01 -0.0791 0.0863 0.398 CD4_CTL L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 4.25e-01 0.0675 0.0844 0.398 CD4_CTL L2
ENSG00000139323 POC1B -384572 sc-eQTL 5.00e-01 -0.0624 0.0923 0.398 CD4_CTL L2
ENSG00000139324 TMTC3 999179 sc-eQTL 3.77e-01 -0.0771 0.0871 0.398 CD4_CTL L2
ENSG00000198707 CEP290 999387 sc-eQTL 8.96e-01 -0.0121 0.0925 0.398 CD4_CTL L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 6.92e-01 0.0324 0.0818 0.398 CD4_CTL L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 4.58e-01 0.0622 0.0836 0.398 CD4_CTL L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 9.48e-01 -0.00618 0.0953 0.398 CD4_CTL L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 1.25e-01 0.0784 0.0509 0.391 CD4_Naive L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 3.32e-01 0.0762 0.0783 0.391 CD4_Naive L2
ENSG00000139323 POC1B -384572 sc-eQTL 3.44e-01 -0.0672 0.0708 0.391 CD4_Naive L2
ENSG00000139324 TMTC3 999179 sc-eQTL 7.82e-01 -0.0202 0.0728 0.391 CD4_Naive L2
ENSG00000198707 CEP290 999387 sc-eQTL 8.48e-01 0.0126 0.0661 0.391 CD4_Naive L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 6.39e-01 -0.0356 0.076 0.391 CD4_Naive L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 2.64e-01 0.0883 0.0789 0.391 CD4_Naive L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 5.80e-01 0.0375 0.0678 0.391 CD4_Naive L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 1.88e-01 0.0729 0.0552 0.391 CD4_TCM L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 4.51e-01 0.0559 0.0741 0.391 CD4_TCM L2
ENSG00000139323 POC1B -384572 sc-eQTL 3.01e-02 0.177 0.0812 0.391 CD4_TCM L2
ENSG00000139324 TMTC3 999179 sc-eQTL 1.47e-01 -0.124 0.085 0.391 CD4_TCM L2
ENSG00000198707 CEP290 999387 sc-eQTL 4.13e-01 -0.0599 0.073 0.391 CD4_TCM L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 8.69e-01 -0.0128 0.0781 0.391 CD4_TCM L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 7.76e-01 -0.026 0.0913 0.391 CD4_TCM L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 6.78e-01 -0.0327 0.0787 0.391 CD4_TCM L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 3.99e-01 0.0584 0.0692 0.391 CD4_TEM L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 1.47e-01 0.116 0.0798 0.391 CD4_TEM L2
ENSG00000139323 POC1B -384572 sc-eQTL 8.56e-02 -0.16 0.0926 0.391 CD4_TEM L2
ENSG00000139324 TMTC3 999179 sc-eQTL 6.95e-02 0.168 0.0918 0.391 CD4_TEM L2
ENSG00000198707 CEP290 999387 sc-eQTL 3.43e-01 0.0829 0.0872 0.391 CD4_TEM L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 4.84e-01 0.0571 0.0815 0.391 CD4_TEM L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 6.48e-01 0.0407 0.0891 0.391 CD4_TEM L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 3.78e-01 0.0753 0.0851 0.391 CD4_TEM L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 5.66e-01 -0.0398 0.0691 0.391 CD8_CTL L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 6.06e-01 0.0432 0.0835 0.391 CD8_CTL L2
ENSG00000139323 POC1B -384572 sc-eQTL 4.63e-01 -0.0617 0.0839 0.391 CD8_CTL L2
ENSG00000139324 TMTC3 999179 sc-eQTL 4.30e-01 -0.0686 0.0866 0.391 CD8_CTL L2
ENSG00000198707 CEP290 999387 sc-eQTL 4.03e-01 -0.0664 0.0793 0.391 CD8_CTL L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 1.82e-01 -0.112 0.0838 0.391 CD8_CTL L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 3.35e-01 0.0816 0.0844 0.391 CD8_CTL L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 9.01e-01 -0.0104 0.0839 0.391 CD8_CTL L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 6.03e-01 0.0376 0.0721 0.391 CD8_Naive L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 3.65e-01 0.0701 0.0772 0.391 CD8_Naive L2
ENSG00000139323 POC1B -384572 sc-eQTL 8.16e-01 0.0198 0.0851 0.391 CD8_Naive L2
ENSG00000139324 TMTC3 999179 sc-eQTL 8.16e-01 0.0207 0.0888 0.391 CD8_Naive L2
ENSG00000198707 CEP290 999387 sc-eQTL 8.67e-01 -0.0129 0.0774 0.391 CD8_Naive L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 7.08e-01 0.0319 0.085 0.391 CD8_Naive L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 9.00e-01 -0.0109 0.0868 0.391 CD8_Naive L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 4.71e-01 0.0523 0.0724 0.391 CD8_Naive L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 2.35e-01 -0.0894 0.075 0.4 CD8_TCM L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 6.07e-02 -0.163 0.0866 0.4 CD8_TCM L2
ENSG00000139323 POC1B -384572 sc-eQTL 1.25e-01 -0.141 0.0914 0.4 CD8_TCM L2
ENSG00000139324 TMTC3 999179 sc-eQTL 2.91e-01 -0.0938 0.0885 0.4 CD8_TCM L2
ENSG00000198707 CEP290 999387 sc-eQTL 6.07e-01 -0.045 0.0874 0.4 CD8_TCM L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 7.25e-01 0.0286 0.0811 0.4 CD8_TCM L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 4.98e-01 0.0544 0.0802 0.4 CD8_TCM L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 8.76e-01 -0.0136 0.0868 0.4 CD8_TCM L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 9.37e-01 -0.0074 0.0934 0.393 CD8_TEM L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 2.21e-01 0.112 0.091 0.393 CD8_TEM L2
ENSG00000139323 POC1B -384572 sc-eQTL 1.30e-01 0.141 0.0927 0.393 CD8_TEM L2
ENSG00000139324 TMTC3 999179 sc-eQTL 5.08e-01 -0.0594 0.0895 0.393 CD8_TEM L2
ENSG00000198707 CEP290 999387 sc-eQTL 7.46e-01 0.0307 0.0947 0.393 CD8_TEM L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 9.03e-01 -0.0104 0.0849 0.393 CD8_TEM L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 3.76e-01 0.0713 0.0804 0.393 CD8_TEM L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 6.03e-01 -0.0486 0.0933 0.393 CD8_TEM L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 8.86e-01 0.0109 0.0757 0.394 MAIT L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 9.42e-01 0.00606 0.0835 0.394 MAIT L2
ENSG00000139323 POC1B -384572 sc-eQTL 3.24e-02 -0.185 0.086 0.394 MAIT L2
ENSG00000139324 TMTC3 999179 sc-eQTL 9.20e-01 -0.00888 0.0879 0.394 MAIT L2
ENSG00000198707 CEP290 999387 sc-eQTL 6.87e-01 0.0339 0.084 0.394 MAIT L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 1.70e-01 -0.117 0.085 0.394 MAIT L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 2.50e-01 0.0983 0.0851 0.394 MAIT L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 5.79e-02 0.158 0.0827 0.394 MAIT L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 2.48e-01 0.092 0.0794 0.393 NK_CD56bright L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 1.26e-01 0.128 0.0836 0.393 NK_CD56bright L2
ENSG00000139323 POC1B -384572 sc-eQTL 1.08e-01 -0.147 0.0911 0.393 NK_CD56bright L2
ENSG00000139324 TMTC3 999179 sc-eQTL 8.66e-01 0.0154 0.0909 0.393 NK_CD56bright L2
ENSG00000198707 CEP290 999387 sc-eQTL 2.98e-01 -0.0948 0.0908 0.393 NK_CD56bright L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 5.92e-01 -0.0507 0.0945 0.393 NK_CD56bright L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 5.54e-01 0.0529 0.0892 0.393 NK_CD56bright L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 2.56e-01 -0.104 0.0914 0.393 NK_CD56bright L2
ENSG00000274021 AC024909.1 -209540 sc-eQTL 3.40e-01 0.0793 0.083 0.393 NK_CD56bright L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 3.77e-01 -0.0611 0.0691 0.388 NK_CD56dim L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 9.19e-01 -0.0065 0.064 0.388 NK_CD56dim L2
ENSG00000139323 POC1B -384572 sc-eQTL 1.01e-03 -0.26 0.078 0.388 NK_CD56dim L2
ENSG00000139324 TMTC3 999179 sc-eQTL 5.37e-01 -0.0562 0.0909 0.388 NK_CD56dim L2
ENSG00000198707 CEP290 999387 sc-eQTL 3.52e-01 -0.0727 0.0779 0.388 NK_CD56dim L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 1.63e-01 0.11 0.0789 0.388 NK_CD56dim L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 5.30e-01 0.0583 0.0927 0.388 NK_CD56dim L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 4.53e-01 0.0659 0.0877 0.388 NK_CD56dim L2
ENSG00000274021 AC024909.1 -209540 sc-eQTL 9.57e-01 -0.00425 0.078 0.388 NK_CD56dim L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 6.65e-01 -0.0367 0.0847 0.39 NK_HLA L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 4.34e-01 -0.0685 0.0875 0.39 NK_HLA L2
ENSG00000139323 POC1B -384572 sc-eQTL 2.76e-01 -0.108 0.0985 0.39 NK_HLA L2
ENSG00000139324 TMTC3 999179 sc-eQTL 9.71e-02 0.144 0.0866 0.39 NK_HLA L2
ENSG00000198707 CEP290 999387 sc-eQTL 8.29e-02 -0.169 0.0968 0.39 NK_HLA L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 2.54e-01 0.0995 0.087 0.39 NK_HLA L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 6.06e-02 -0.159 0.0843 0.39 NK_HLA L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 8.26e-01 -0.0213 0.0966 0.39 NK_HLA L2
ENSG00000274021 AC024909.1 -209540 sc-eQTL 9.46e-01 -0.00509 0.075 0.39 NK_HLA L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 7.69e-01 -0.0215 0.0729 0.388 NK_cytokine L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 9.04e-01 -0.0085 0.0701 0.388 NK_cytokine L2
ENSG00000139323 POC1B -384572 sc-eQTL 1.12e-01 -0.133 0.0836 0.388 NK_cytokine L2
ENSG00000139324 TMTC3 999179 sc-eQTL 8.16e-01 -0.0204 0.0873 0.388 NK_cytokine L2
ENSG00000198707 CEP290 999387 sc-eQTL 4.96e-01 0.0546 0.0799 0.388 NK_cytokine L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 9.16e-01 0.00898 0.0854 0.388 NK_cytokine L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 3.24e-01 0.0827 0.0836 0.388 NK_cytokine L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 5.08e-01 -0.0579 0.0874 0.388 NK_cytokine L2
ENSG00000274021 AC024909.1 -209540 sc-eQTL 6.45e-01 -0.0373 0.0808 0.388 NK_cytokine L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 7.54e-01 -0.0295 0.0939 0.374 PB L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 8.22e-02 0.199 0.114 0.374 PB L2
ENSG00000139323 POC1B -384572 sc-eQTL 4.90e-01 -0.0891 0.129 0.374 PB L2
ENSG00000139324 TMTC3 999179 sc-eQTL 8.95e-01 0.017 0.129 0.374 PB L2
ENSG00000198707 CEP290 999387 sc-eQTL 7.82e-01 -0.0306 0.11 0.374 PB L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 4.32e-01 0.102 0.129 0.374 PB L2
ENSG00000258216 AC009522.1 -570573 sc-eQTL 2.75e-01 0.127 0.116 0.374 PB L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 2.39e-01 0.132 0.112 0.374 PB L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 6.73e-02 0.21 0.114 0.374 PB L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 1.08e-01 -0.14 0.0866 0.391 Pro_T L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 8.39e-01 -0.0173 0.0849 0.391 Pro_T L2
ENSG00000139323 POC1B -384572 sc-eQTL 4.87e-02 -0.181 0.0915 0.391 Pro_T L2
ENSG00000139324 TMTC3 999179 sc-eQTL 2.51e-01 -0.0994 0.0865 0.391 Pro_T L2
ENSG00000198707 CEP290 999387 sc-eQTL 8.55e-01 -0.0166 0.0911 0.391 Pro_T L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 5.39e-01 0.0539 0.0875 0.391 Pro_T L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 4.03e-01 0.0646 0.0772 0.391 Pro_T L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 9.44e-01 0.00652 0.0927 0.391 Pro_T L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 6.59e-01 0.033 0.0748 0.391 Treg L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 6.66e-01 -0.0358 0.0828 0.391 Treg L2
ENSG00000139323 POC1B -384572 sc-eQTL 9.37e-03 -0.242 0.0924 0.391 Treg L2
ENSG00000139324 TMTC3 999179 sc-eQTL 6.24e-01 0.0452 0.0921 0.391 Treg L2
ENSG00000198707 CEP290 999387 sc-eQTL 2.31e-01 -0.106 0.0883 0.391 Treg L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 3.49e-01 -0.0818 0.0871 0.391 Treg L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 6.64e-01 -0.0358 0.0824 0.391 Treg L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 2.17e-01 -0.0989 0.0799 0.391 Treg L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 6.33e-01 -0.0317 0.0663 0.405 cDC L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 1.53e-01 -0.0928 0.0646 0.405 cDC L2
ENSG00000139323 POC1B -384572 sc-eQTL 7.23e-01 -0.0348 0.0982 0.405 cDC L2
ENSG00000139324 TMTC3 999179 sc-eQTL 9.51e-01 0.00514 0.084 0.405 cDC L2
ENSG00000198707 CEP290 999387 sc-eQTL 6.56e-01 -0.0432 0.0968 0.405 cDC L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 8.85e-01 0.0131 0.0909 0.405 cDC L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 4.79e-02 0.148 0.0743 0.405 cDC L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 6.92e-01 -0.0291 0.0734 0.405 cDC L2
ENSG00000274021 AC024909.1 -209540 sc-eQTL 9.80e-01 0.00197 0.0801 0.405 cDC L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 5.54e-01 -0.0241 0.0407 0.391 cMono_IL1B L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 9.66e-04 -0.204 0.061 0.391 cMono_IL1B L2
ENSG00000139323 POC1B -384572 sc-eQTL 2.50e-01 -0.0961 0.0833 0.391 cMono_IL1B L2
ENSG00000198707 CEP290 999387 sc-eQTL 9.70e-02 0.134 0.0803 0.391 cMono_IL1B L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 8.91e-01 0.0105 0.0764 0.391 cMono_IL1B L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 2.94e-02 -0.16 0.0729 0.391 cMono_IL1B L2
ENSG00000274021 AC024909.1 -209540 sc-eQTL 5.26e-04 -0.222 0.0632 0.391 cMono_IL1B L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 9.86e-01 -0.000819 0.0468 0.391 cMono_S100A L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 3.42e-01 -0.0658 0.0691 0.391 cMono_S100A L2
ENSG00000139323 POC1B -384572 sc-eQTL 5.18e-01 -0.0583 0.0901 0.391 cMono_S100A L2
ENSG00000198707 CEP290 999387 sc-eQTL 3.14e-01 -0.0877 0.0869 0.391 cMono_S100A L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 4.40e-02 0.167 0.0823 0.391 cMono_S100A L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 6.41e-01 -0.0279 0.0597 0.391 cMono_S100A L2
ENSG00000274021 AC024909.1 -209540 sc-eQTL 9.31e-01 -0.00588 0.0676 0.391 cMono_S100A L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 9.29e-01 0.0087 0.0979 0.43 gdT L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 2.88e-01 -0.104 0.0979 0.43 gdT L2
ENSG00000139323 POC1B -384572 sc-eQTL 1.41e-01 -0.156 0.105 0.43 gdT L2
ENSG00000139324 TMTC3 999179 sc-eQTL 5.58e-01 -0.0578 0.0985 0.43 gdT L2
ENSG00000198707 CEP290 999387 sc-eQTL 5.98e-03 0.293 0.105 0.43 gdT L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 7.31e-01 -0.035 0.102 0.43 gdT L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 9.75e-02 -0.155 0.0927 0.43 gdT L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 8.55e-01 -0.0199 0.108 0.43 gdT L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 6.83e-01 -0.0228 0.0557 0.393 intMono L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 2.39e-03 -0.192 0.0623 0.393 intMono L2
ENSG00000139323 POC1B -384572 sc-eQTL 1.53e-02 -0.23 0.0942 0.393 intMono L2
ENSG00000198707 CEP290 999387 sc-eQTL 8.92e-01 -0.011 0.0812 0.393 intMono L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 2.04e-01 -0.11 0.0865 0.393 intMono L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 1.43e-01 -0.116 0.0787 0.393 intMono L2
ENSG00000274021 AC024909.1 -209540 sc-eQTL 9.90e-01 -0.000998 0.0791 0.393 intMono L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 8.95e-01 -0.00645 0.0486 0.389 ncMono L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 1.89e-01 -0.0905 0.0687 0.389 ncMono L2
ENSG00000139323 POC1B -384572 sc-eQTL 2.28e-01 0.104 0.0861 0.389 ncMono L2
ENSG00000198707 CEP290 999387 sc-eQTL 8.36e-01 -0.0172 0.0832 0.389 ncMono L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 1.21e-02 -0.226 0.0892 0.389 ncMono L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 1.09e-01 -0.115 0.0715 0.389 ncMono L2
ENSG00000274021 AC024909.1 -209540 sc-eQTL 4.52e-01 0.059 0.0784 0.389 ncMono L2
ENSG00000070961 ATP2B1 -567825 sc-eQTL 6.90e-01 -0.0308 0.0769 0.415 pDC L2
ENSG00000139318 DUSP6 -211026 sc-eQTL 7.99e-01 -0.0202 0.0791 0.415 pDC L2
ENSG00000139323 POC1B -384572 sc-eQTL 9.11e-01 -0.0123 0.11 0.415 pDC L2
ENSG00000139324 TMTC3 999179 sc-eQTL 3.30e-01 -0.0856 0.0876 0.415 pDC L2
ENSG00000198707 CEP290 999387 sc-eQTL 9.34e-01 -0.0085 0.103 0.415 pDC L2
ENSG00000257594 GALNT4 -383321 sc-eQTL 5.83e-01 -0.054 0.0982 0.415 pDC L2
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 9.95e-01 0.000501 0.0883 0.415 pDC L2
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 8.85e-01 -0.00921 0.0637 0.415 pDC L2
ENSG00000274021 AC024909.1 -209540 sc-eQTL 3.79e-01 -0.069 0.0783 0.415 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000070961 ATP2B1 -567825 sc-eQTL 6.27e-01 -0.0295 0.0607 0.391 B_Memory LOneK1K
ENSG00000139318 DUSP6 -211026 sc-eQTL 7.65e-01 0.0257 0.0861 0.391 B_Memory LOneK1K
ENSG00000139323 POC1B -384572 sc-eQTL 5.79e-01 -0.0463 0.0834 0.391 B_Memory LOneK1K
ENSG00000139324 TMTC3 999179 sc-eQTL 5.13e-01 -0.0608 0.0929 0.391 B_Memory LOneK1K
ENSG00000198707 CEP290 999387 sc-eQTL 1.86e-01 -0.103 0.0776 0.391 B_Memory LOneK1K
ENSG00000257594 GALNT4 -383321 sc-eQTL 4.63e-03 -0.232 0.0809 0.391 B_Memory LOneK1K
ENSG00000258216 AC009522.1 -570573 sc-eQTL 1.45e-01 -0.122 0.0831 0.391 B_Memory LOneK1K
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 3.37e-01 -0.0904 0.094 0.391 B_Memory LOneK1K
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 5.00e-01 -0.0439 0.065 0.391 B_Memory LOneK1K
ENSG00000070961 ATP2B1 -567825 sc-eQTL 5.11e-01 -0.0358 0.0545 0.391 B_Naive LOneK1K
ENSG00000139318 DUSP6 -211026 sc-eQTL 6.17e-01 -0.034 0.0678 0.391 B_Naive LOneK1K
ENSG00000139323 POC1B -384572 sc-eQTL 1.80e-01 0.0951 0.0707 0.391 B_Naive LOneK1K
ENSG00000139324 TMTC3 999179 sc-eQTL 2.99e-02 -0.196 0.0898 0.391 B_Naive LOneK1K
ENSG00000198707 CEP290 999387 sc-eQTL 3.27e-01 0.0754 0.0767 0.391 B_Naive LOneK1K
ENSG00000257594 GALNT4 -383321 sc-eQTL 2.95e-01 0.0788 0.0751 0.391 B_Naive LOneK1K
ENSG00000258216 AC009522.1 -570573 sc-eQTL 9.69e-01 0.00319 0.0819 0.391 B_Naive LOneK1K
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 7.81e-01 -0.024 0.0863 0.391 B_Naive LOneK1K
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 1.01e-01 -0.107 0.0651 0.391 B_Naive LOneK1K
ENSG00000070961 ATP2B1 -567825 sc-eQTL 4.78e-01 -0.0269 0.0378 0.391 CD14_Mono LOneK1K
ENSG00000139318 DUSP6 -211026 sc-eQTL 7.80e-03 -0.163 0.0606 0.391 CD14_Mono LOneK1K
ENSG00000139323 POC1B -384572 sc-eQTL 2.31e-01 -0.0953 0.0794 0.391 CD14_Mono LOneK1K
ENSG00000198707 CEP290 999387 sc-eQTL 3.52e-01 0.0735 0.0788 0.391 CD14_Mono LOneK1K
ENSG00000257594 GALNT4 -383321 sc-eQTL 3.09e-01 0.0743 0.073 0.391 CD14_Mono LOneK1K
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 3.60e-02 -0.123 0.0584 0.391 CD14_Mono LOneK1K
ENSG00000274021 AC024909.1 -209540 sc-eQTL 3.83e-03 -0.174 0.0595 0.391 CD14_Mono LOneK1K
ENSG00000070961 ATP2B1 -567825 sc-eQTL 2.54e-01 -0.0519 0.0453 0.392 CD16_Mono LOneK1K
ENSG00000139318 DUSP6 -211026 sc-eQTL 2.29e-02 -0.131 0.057 0.392 CD16_Mono LOneK1K
ENSG00000139323 POC1B -384572 sc-eQTL 4.51e-01 -0.0666 0.0882 0.392 CD16_Mono LOneK1K
ENSG00000198707 CEP290 999387 sc-eQTL 4.77e-01 -0.0568 0.0797 0.392 CD16_Mono LOneK1K
ENSG00000257594 GALNT4 -383321 sc-eQTL 1.52e-02 -0.207 0.0844 0.392 CD16_Mono LOneK1K
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 1.01e-01 -0.123 0.0746 0.392 CD16_Mono LOneK1K
ENSG00000274021 AC024909.1 -209540 sc-eQTL 9.83e-01 -0.00158 0.0732 0.392 CD16_Mono LOneK1K
ENSG00000070961 ATP2B1 -567825 sc-eQTL 8.73e-01 -0.00963 0.0602 0.388 NK_CD56dim LOneK1K
ENSG00000139318 DUSP6 -211026 sc-eQTL 9.89e-01 -0.000786 0.0585 0.388 NK_CD56dim LOneK1K
ENSG00000139323 POC1B -384572 sc-eQTL 3.07e-04 -0.27 0.0736 0.388 NK_CD56dim LOneK1K
ENSG00000139324 TMTC3 999179 sc-eQTL 9.85e-01 0.00159 0.084 0.388 NK_CD56dim LOneK1K
ENSG00000198707 CEP290 999387 sc-eQTL 6.25e-01 -0.0354 0.0723 0.388 NK_CD56dim LOneK1K
ENSG00000257594 GALNT4 -383321 sc-eQTL 8.20e-02 0.132 0.0754 0.388 NK_CD56dim LOneK1K
ENSG00000270344 POC1B-AS1 -383119 sc-eQTL 2.90e-01 0.0917 0.0865 0.388 NK_CD56dim LOneK1K
ENSG00000271614 ATP2B1-AS1 -567484 sc-eQTL 8.77e-01 0.0129 0.0831 0.388 NK_CD56dim LOneK1K
ENSG00000274021 AC024909.1 -209540 sc-eQTL 7.83e-01 -0.0203 0.0735 0.388 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139318 DUSP6 -211026 eQTL 0.00579 -0.0682 0.0247 0.0 0.0 0.402
ENSG00000246363 LINC02458 -168091 eQTL 0.00423 -0.075 0.0262 0.0024 0.0 0.402

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139318 DUSP6 -211026 1.4e-06 1.07e-06 2.24e-07 1.16e-06 3.73e-07 5.98e-07 1.59e-06 3.56e-07 1.52e-06 5.63e-07 1.75e-06 7.37e-07 2.1e-06 2.81e-07 5.22e-07 9.19e-07 9.01e-07 7.72e-07 8.18e-07 5.21e-07 8.02e-07 1.82e-06 8.92e-07 6.57e-07 2.17e-06 5.38e-07 9.48e-07 9.43e-07 1.38e-06 1.31e-06 6.73e-07 2.53e-07 3e-07 6.99e-07 5.27e-07 4.39e-07 5.76e-07 2.44e-07 2.21e-07 2.46e-07 2.88e-07 1.62e-06 2.46e-07 3.38e-08 3.17e-07 1.35e-07 2.6e-07 4.79e-08 1.56e-07